Rh5CG378800

SPRY domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0011366
Physical Location & Seq
Reverse (-)
49400381 .. 49403449
3069 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG378800.1

Sequence Viewer

Length: 1335 bp
ATGGACAATCTCCAATCCAATTACATGGACGAAGACGAGGAAGAAGACGAACAATCCAAAACCACCGCCGCCGCCGTCGCAATCACCGAGCTCGTTGAGCCGGCGACGACAACGGAGCCCGCAAACGACGACGAGCCCAGTTCGGAGCCCATAATTAACCCACCGCCCACCGACCCGCTCAACGGCAACAAAACCGAGACCGAAGCCTCCGAAGATCTCTCCGAGTCCGTCAAATCCCTCGAAAACGACGTCGACGTCGACGTCGACATCGAAGACGAAGACCCGCCTCCCAAGAAGCAAAAGCAGCTCTCTTCTCTCACCGCCATTGCCTCCGCCGCGGCGACCACCCCACCCGCTTCTTCGGACCCGGACCAGGCCCAATTGCTCCTACCCGCACCCGAAGCCAACGGCAACGGCAACGGCGCTCTCCTCCTCCCGGCGCAACCCTCCAAGAAGTCCACCAAGAAGAAGAACAACAATGTGTGGGTCACCAAGTCGACCCGGAAAGGGAAGAAGAAGACCAAGCCCAGCACCAACAACAATGCCCCCGGAGAGGACAAGGTTCTCGTCACTCCGGTCACCAGATTCCCCGACAAGACGGACGACACGCCGGAGATGACTATCTGCCTCTCCAAGGTCTACAAGGCCGAGAAAGTCGAGGTCAGCGAGGACCGAATGAGTGCAGGGAGTACTAAAGGGTATAGAATGGTTAGGGCCACCAGGGGAGTTGTGGAAGGTGCTTGGTACTTTGAAATTAGGGTAGTCAGCTTGGGAGAGACCGGCCACACCCGCGTCGGCTGGTCCACTGACAAAGGTGACCTTCAGGCTCCGGTTGGATATGATGGGAATAGTTTCGGGTATCGGGACATTGATGGGAGTAAGGTGCATAAGGCTTTGAGGGAGAAGTATGGCGACGAAGGGTATAAGGAAGGTGATGTTATAGGGTTCTATATAAATTTGCCGGATGGGGGGTCTTATGCCCCCAAACCTCCGCATTTGGTTTGGTATAAAGGGCAGAGGTATGCTACAGCACCTGAAGCCAAGGAGGATGCTGTCAAAGTAGTGCCTGGAAGTGAGATATCTTTTTTCAAAAATGGGGTATGCCAAGGTGTTGCTTTTAAAGATCTATATGGTGGTCGTTACTATCCTGCTGCTTCAATGTATACTCTTCCCCATCAACCAAATTGTGTGGTCAAGTTCAACTTTGGTCCTGACTTTGAATTCTTTCCAGAAGACTTCAATGAACGTCCAGTGCCCAGGCCCATGGTTGAAGTTCCTTATCATGGGTTTGAAAACCGTGCTGAAAATGGAGTGTCCAATGAGAAGAACAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0002376 GO:0002520 GO:0002682 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008284 GO:0008757 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018130 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0022607 GO:0030097 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0034708 GO:0034968 GO:0035097 GO:0036211 GO:0042054 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045595 GO:0045637 GO:0045652 GO:0046483 GO:0048188 GO:0048316 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048522 GO:0048534 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051568 GO:0051716 GO:0060255 GO:0060776 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080182 GO:0090304 GO:0097159 GO:0097659 GO:0099402 GO:0140096 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1903506 GO:1903706 GO:1904837 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04212 ko04934 map04212 map04934
Pfam Domains
Protein Families
SPRY

Protein Analysis

444

Amino Acids

48.63

Weight (kDa)

4.83

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPRY PF00622 248 - 323 8.4e-10 SPRY domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G51450
fragaria_vesca FvH4_3g28490 FvH4_3g28490 FvH4_3g28490
malus_domestica MD03G1172400.v1.1 MD11G1190300.v1.1
prunus_persica Prupe.4G254200_v2.0.a1
pyrus_communis pycom03g12960 pycom11g16680
rosa_chinensis RchiOBHm_Chr5g0052831
rosa_laevigata RLG00000034789
rosa_multiflora Rmu_ssc0000311.1_g000014
rosa_roxburghii Rroxscaffold_1G00028660
rosa_rugosa Rorug05G0269300 Rorug05G0269400
rosa_samantha Rh5AG341400 Rh5BG352100 Rh5CG378800 Rh5DG368400
rosa_wichuraiana Rw5G032190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 254, 260
AatII GACGTC 3 cut(s) 252, 258, 264
AccBSI CCGCTC 1 cut(s) 178
AccI GTMKAC 6 cut(s) 252, 258, 264, 497, 639, 1163
AccII CGCG 2 cut(s) 338, 792
AcoI YGGCCR 1 cut(s) 781
AcsI RAATTY 2 cut(s) 955, 1220
AcuI CTGAAG 2 cut(s) 806, 1056
AcyI GRCGYC 3 cut(s) 249, 255, 261
AfaI GTAC 2 cut(s) 691, 746
AfiI CCNNNNNNNGG 8 cut(s) 182, 373, 436, 507, 553, 634, 968, 1283
AgsI TTSAA 8 cut(s) 752, 1090, 1158, 1201, 1220, 1240, 1271, 1292
AjnI CCWGG 4 cut(s) 372, 719, 1066, 1256
AluBI AGCT 3 cut(s) 91, 307, 768
AluI AGCT 3 cut(s) 91, 307, 768
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 2 cut(s) 191, 770
AlwNI CAGNNNCTG 1 cut(s) 1034
AoxI GGCC 5 cut(s) 375, 645, 714, 781, 1259
ApeKI GCWGC 2 cut(s) 304, 1151
ApoI RAATTY 2 cut(s) 955, 1220
ArsI GACNNNNNNTTYG 2 cut(s) 234, 266
Asp700I GAANNNNTTC 2 cut(s) 851, 1224
AspLEI GCGC 2 cut(s) 425, 442
AspS9I GGNCC 8 cut(s) 364, 370, 376, 670, 714, 801, 1208, 1260
AsuC2I CCSGG 4 cut(s) 368, 437, 502, 549
AsuHPI GGTGA 6 cut(s) 76, 310, 481, 571, 827, 944
AvaII GGWCC 5 cut(s) 364, 370, 670, 801, 1208
BaeGI GKGCMC 1 cut(s) 1257
BanII GRGCYC 4 cut(s) 93, 120, 138, 150
BbsI GAAGAC 6 cut(s) 39, 51, 279, 285, 524, 1239
Bbv12I GWGCWC 1 cut(s) 93
BbvI GCAGC 2 cut(s) 316, 1138
BccI CCATC 4 cut(s) 836, 866, 959, 1182
BceAI ACGGC 5 cut(s) 59, 199, 424, 430, 436
BciT130I CCWGG 4 cut(s) 374, 721, 1068, 1258
BcnI CCSGG 4 cut(s) 368, 437, 502, 549
BcoDI GTCTC 2 cut(s) 191, 770
BfmI CTRYAG 1 cut(s) 1026
BfoI RGCGCY 1 cut(s) 426
BglII AGATCT 2 cut(s) 214, 1123
BisI GCNGC 6 cut(s) 69, 72, 305, 336, 339, 1152
BlsI GCNGC 6 cut(s) 70, 73, 306, 337, 340, 1153
BmcAI AGTACT 1 cut(s) 691
Bme1390I CCNGG 8 cut(s) 368, 374, 437, 502, 549, 721, 1068, 1258
Bme18I GGWCC 5 cut(s) 364, 370, 670, 801, 1208
BmgT120I GGNCC 8 cut(s) 364, 370, 376, 670, 714, 801, 1208, 1260
BmiI GGNNCC 4 cut(s) 117, 147, 366, 828
BmrFI CCNGG 8 cut(s) 368, 374, 437, 502, 549, 721, 1068, 1258
BmrI ACTGGG 1 cut(s) 132
BmsI GCATC 1 cut(s) 1039
BmuI ACTGGG 1 cut(s) 132
BpiI GAAGAC 6 cut(s) 39, 51, 279, 285, 524, 1239
BpuMI CCSGG 4 cut(s) 368, 437, 502, 549
BsaBI GATNNNNATC 1 cut(s) 620
BsaHI GRCGYC 3 cut(s) 249, 255, 261
BsaI GGTCTC 2 cut(s) 191, 770
BsaJI CCNNGG 8 cut(s) 336, 547, 633, 720, 1041, 1105, 1256, 1263
BsaWI WCCGGW 2 cut(s) 574, 829
Bsc4I CCNNNNNNNGG 8 cut(s) 182, 373, 436, 507, 553, 634, 968, 1283
Bse118I RCCGGY 2 cut(s) 100, 779
Bse1I ACTGG 2 cut(s) 138, 1250
Bse3DI GCAATG 1 cut(s) 324
Bse8I GATNNNNATC 1 cut(s) 620
BseBI CCWGG 4 cut(s) 374, 721, 1068, 1258
BseDI CCNNGG 8 cut(s) 336, 547, 633, 720, 1041, 1105, 1256, 1263
BseGI GGATG 2 cut(s) 970, 1054
BseJI GATNNNNATC 1 cut(s) 620
BseLI CCNNNNNNNGG 8 cut(s) 182, 373, 436, 507, 553, 634, 968, 1283
BseMI GCAATG 1 cut(s) 324
BseNI ACTGG 2 cut(s) 138, 1250
BseRI GAGGAG 2 cut(s) 419, 422
BseSI GKGCMC 1 cut(s) 1257
BseXI GCAGC 2 cut(s) 316, 1138
BseYI CCCAGC 1 cut(s) 527
BsgI GTGCAG 1 cut(s) 702
Bsh1236I CGCG 2 cut(s) 338, 792
BshFI GGCC 5 cut(s) 377, 647, 716, 783, 1261
BsiHKAI GWGCWC 1 cut(s) 93
BslFI GGGAC 1 cut(s) 878
BslI CCNNNNNNNGG 8 cut(s) 182, 373, 436, 507, 553, 634, 968, 1283
BsmAI GTCTC 2 cut(s) 191, 770
BsmFI GGGAC 1 cut(s) 878
BsnI GGCC 5 cut(s) 377, 647, 716, 783, 1261
Bso31I GGTCTC 2 cut(s) 191, 770
Bsp1286I GDGCHC 5 cut(s) 93, 120, 138, 150, 1257
Bsp143I GATC 2 cut(s) 214, 1123
Bsp19I CCATGG 1 cut(s) 1263
BspANI GGCC 5 cut(s) 377, 647, 716, 783, 1261
BspFNI CGCG 2 cut(s) 338, 792
BspLI GGNNCC 4 cut(s) 117, 147, 366, 828
BspTNI GGTCTC 2 cut(s) 191, 770
BsrBI CCGCTC 1 cut(s) 178
BsrDI GCAATG 1 cut(s) 324
BsrFI RCCGGY 2 cut(s) 100, 779
BsrI ACTGG 2 cut(s) 138, 1250
BssAI RCCGGY 2 cut(s) 100, 779
BssECI CCNNGG 8 cut(s) 336, 547, 633, 720, 1041, 1105, 1256, 1263
BssMI GATC 2 cut(s) 214, 1123
BssNAI GTATAC 1 cut(s) 1164
BssNI GRCGYC 3 cut(s) 249, 255, 261
BssT1I CCWWGG 4 cut(s) 633, 1041, 1105, 1263
Bst1107I GTATAC 1 cut(s) 1164
Bst2UI CCWGG 4 cut(s) 374, 721, 1068, 1258
Bst4CI ACNGT 1 cut(s) 1298
Bst6I CTCTTC 2 cut(s) 316, 1173
BstACI GRCGYC 3 cut(s) 249, 255, 261
BstC8I GCNNGC 2 cut(s) 102, 120
BstDSI CCRYGG 2 cut(s) 336, 1263
BstEII GGTNACC 3 cut(s) 487, 577, 815
BstENI CCTNNNNNAGG 1 cut(s) 632
BstF5I GGATG 2 cut(s) 970, 1054
BstFNI CGCG 2 cut(s) 338, 792
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 2 cut(s) 425, 442
BstKTI GATC 2 cut(s) 217, 1126
BstMAI GTCTC 2 cut(s) 191, 770
BstMBI GATC 2 cut(s) 214, 1123
BstMWI GCNNNNNNNGC 7 cut(s) 77, 97, 304, 335, 401, 789, 1037
BstNI CCWGG 4 cut(s) 374, 721, 1068, 1258
BstPI GGTNACC 3 cut(s) 487, 577, 815
BstSCI CCNGG 8 cut(s) 366, 372, 435, 500, 547, 719, 1066, 1256
BstSFI CTRYAG 1 cut(s) 1026
BstSLI GKGCMC 1 cut(s) 1257
BstUI CGCG 2 cut(s) 338, 792
BstV1I GCAGC 2 cut(s) 316, 1138
BstV2I GAAGAC 6 cut(s) 39, 51, 279, 285, 524, 1239
BstX2I RGATCY 2 cut(s) 214, 1123
BstXI CCANNNNNNTGG 2 cut(s) 25, 1264
BstYI RGATCY 2 cut(s) 214, 1123
BstZ17I GTATAC 1 cut(s) 1164
BsuRI GGCC 5 cut(s) 377, 647, 716, 783, 1261
BtgI CCRYGG 2 cut(s) 336, 1263
BtsCI GGATG 2 cut(s) 970, 1054
BtsIMutI CAGTG 2 cut(s) 804, 1257
Cac8I GCNNGC 2 cut(s) 102, 120
CaiI CAGNNNCTG 1 cut(s) 1034
CfoI GCGC 2 cut(s) 425, 442
Cfr10I RCCGGY 2 cut(s) 100, 779
Cfr13I GGNCC 8 cut(s) 364, 370, 376, 670, 714, 801, 1208, 1260
Cfr42I CCGCGG 1 cut(s) 339
CseI GACGC 1 cut(s) 781
Csp6I GTAC 2 cut(s) 690, 745
CspCI CAANNNNNGTGG 2 cut(s) 1170, 1205
CviAII CATG 3 cut(s) 25, 1264, 1283
CviQI GTAC 2 cut(s) 690, 745
DpnI GATC 2 cut(s) 216, 1125
DpnII GATC 2 cut(s) 214, 1123
DraI TTTAAA 1 cut(s) 1120
DrdI GACNNNNNNGTC 2 cut(s) 254, 260
DseDI GACNNNNNNGTC 2 cut(s) 254, 260
EaeI YGGCCR 1 cut(s) 781
Eam1104I CTCTTC 2 cut(s) 316, 1173
EarI CTCTTC 2 cut(s) 316, 1173
EciI GGCGGA 1 cut(s) 322
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 4 cut(s) 633, 1041, 1105, 1263
Eco24I GRGCYC 4 cut(s) 93, 120, 138, 150
Eco31I GGTCTC 2 cut(s) 191, 770
Eco32I GATATC 1 cut(s) 1080
Eco47I GGWCC 5 cut(s) 364, 370, 670, 801, 1208
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 2 cut(s) 806, 1056
Eco91I GGTNACC 3 cut(s) 487, 577, 815
EcoICRI GAGCTC 1 cut(s) 91
EcoNI CCTNNNNNAGG 1 cut(s) 632
EcoO65I GGTNACC 3 cut(s) 487, 577, 815
EcoRI GAATTC 1 cut(s) 1220
EcoRII CCWGG 4 cut(s) 372, 719, 1066, 1256
EcoRV GATATC 1 cut(s) 1080
EcoT14I CCWWGG 4 cut(s) 633, 1041, 1105, 1263
EcoT38I GRGCYC 4 cut(s) 93, 120, 138, 150
ErhI CCWWGG 4 cut(s) 633, 1041, 1105, 1263
FaeI CATG 3 cut(s) 28, 1267, 1286
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 1187, 1219
FaqI GGGAC 1 cut(s) 878
FatI CATG 3 cut(s) 24, 1263, 1282
FauI CCCGC 6 cut(s) 127, 183, 291, 361, 400, 797
FblI GTMKAC 6 cut(s) 252, 258, 264, 497, 639, 1163
Fnu4HI GCNGC 6 cut(s) 69, 72, 305, 336, 339, 1152
FokI GGATG 2 cut(s) 977, 1061
FriOI GRGCYC 4 cut(s) 93, 120, 138, 150
Fsp4HI GCNGC 6 cut(s) 69, 72, 305, 336, 339, 1152
GlaI GCGC 2 cut(s) 424, 441
GluI GCNGC 6 cut(s) 69, 72, 305, 336, 339, 1152
GsaI CCCAGC 1 cut(s) 531
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 5 cut(s) 377, 647, 716, 783, 1261
HgaI GACGC 1 cut(s) 781
HhaI GCGC 2 cut(s) 425, 442
Hin1I GRCGYC 3 cut(s) 249, 255, 261
Hin1II CATG 3 cut(s) 28, 1267, 1286
Hin6I GCGC 2 cut(s) 423, 440
HinP1I GCGC 2 cut(s) 423, 440
HincII GTYRAC 4 cut(s) 253, 259, 265, 498
HindII GTYRAC 4 cut(s) 253, 259, 265, 498
HinfI GANTC 2 cut(s) 224, 585
HphI GGTGA 6 cut(s) 76, 310, 481, 571, 827, 944
Hpy166II GTNNAC 8 cut(s) 253, 259, 265, 459, 498, 640, 804, 1164
Hpy188I TCNGA 4 cut(s) 145, 211, 223, 364
Hpy188III TCNNGA 3 cut(s) 863, 1211, 1229
Hpy8I GTNNAC 8 cut(s) 253, 259, 265, 459, 498, 640, 804, 1164
HpyAV CCTTC 4 cut(s) 728, 830, 911, 923
HpyCH4III ACNGT 1 cut(s) 1298
HpyCH4IV ACGT 4 cut(s) 249, 255, 261, 1246
HpyCH4V TGCA 2 cut(s) 683, 886
HpyF10VI GCNNNNNNNGC 7 cut(s) 77, 97, 304, 335, 401, 789, 1037
HpySE526I ACGT 4 cut(s) 249, 255, 261, 1246
Hsp92I GRCGYC 3 cut(s) 249, 255, 261
Hsp92II CATG 3 cut(s) 28, 1267, 1286
HspAI GCGC 2 cut(s) 423, 440
KroI GCCGGC 1 cut(s) 100
KroNI GCCGGC 1 cut(s) 102
KspI CCGCGG 1 cut(s) 339
Kzo9I GATC 2 cut(s) 214, 1123
LmnI GCTCC 4 cut(s) 115, 145, 390, 832
Lsp1109I GCAGC 2 cut(s) 316, 1138
LweI GCATC 1 cut(s) 1039
MaeII ACGT 4 cut(s) 249, 255, 261, 1246
MaeIII GTNAC 5 cut(s) 487, 568, 577, 815, 1139
MalI GATC 2 cut(s) 216, 1125
MbiI CCGCTC 1 cut(s) 178
MboI GATC 2 cut(s) 214, 1123
MfeI CAATTG 1 cut(s) 380
MflI RGATCY 2 cut(s) 214, 1123
MhlI GDGCHC 5 cut(s) 93, 120, 138, 150, 1257
MluCI AATT 8 cut(s) 19, 153, 380, 753, 955, 1183, 1220, 1330
MlyI GAGTC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 814
MroNI GCCGGC 1 cut(s) 100
MroXI GAANNNNTTC 2 cut(s) 851, 1224
MseI TTAA 2 cut(s) 156, 1119
MspA1I CMGCKG 1 cut(s) 338
MspR9I CCNGG 8 cut(s) 368, 374, 437, 502, 549, 721, 1068, 1258
MunI CAATTG 1 cut(s) 380
MvaI CCWGG 4 cut(s) 374, 721, 1068, 1258
MvnI CGCG 2 cut(s) 338, 792
MwoI GCNNNNNNNGC 7 cut(s) 77, 97, 304, 335, 401, 789, 1037
NaeI GCCGGC 1 cut(s) 102
NciI CCSGG 4 cut(s) 368, 437, 502, 549
NcoI CCATGG 1 cut(s) 1263
NdeII GATC 2 cut(s) 214, 1123
NgoMIV GCCGGC 1 cut(s) 100
NlaIII CATG 3 cut(s) 28, 1267, 1286
NlaIV GGNNCC 4 cut(s) 117, 147, 366, 828
NmeAIII GCCGAG 1 cut(s) 673
NmuCI GTSAC 4 cut(s) 487, 568, 577, 815
PcsI WCGNNNNNNNCGW 8 cut(s) 84, 246, 252, 255, 258, 261, 267, 663
PdiI GCCGGC 1 cut(s) 102
PdmI GAANNNNTTC 2 cut(s) 851, 1224
PfeI GAWTC 1 cut(s) 585
PkrI GCNGC 6 cut(s) 70, 73, 306, 337, 340, 1153
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
Psp124BI GAGCTC 1 cut(s) 93
Psp6I CCWGG 4 cut(s) 372, 719, 1066, 1256
PspEI GGTNACC 3 cut(s) 487, 577, 815
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 4 cut(s) 372, 719, 1066, 1256
PspN4I GGNNCC 4 cut(s) 117, 147, 366, 828
PspPI GGNCC 8 cut(s) 364, 370, 376, 670, 714, 801, 1208, 1260
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 2 cut(s) 214, 1123
RsaI GTAC 2 cut(s) 691, 746
RsaNI GTAC 2 cut(s) 690, 745
SacI GAGCTC 1 cut(s) 93
SacII CCGCGG 1 cut(s) 339
SalI GTCGAC 4 cut(s) 251, 257, 263, 496
SaqAI TTAA 2 cut(s) 156, 1119
SatI GCNGC 6 cut(s) 69, 72, 305, 336, 339, 1152
Sau3AI GATC 2 cut(s) 214, 1123
Sau96I GGNCC 8 cut(s) 364, 370, 376, 670, 714, 801, 1208, 1260
ScaI AGTACT 1 cut(s) 691
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 8 cut(s) 368, 374, 437, 502, 549, 721, 1068, 1258
SduI GDGCHC 5 cut(s) 93, 120, 138, 150, 1257
SfaNI GCATC 1 cut(s) 1039
SfcI CTRYAG 1 cut(s) 1026
Sfr303I CCGCGG 1 cut(s) 339
SgrBI CCGCGG 1 cut(s) 339
SgrDI CGTCGACG 2 cut(s) 251, 257
SinI GGWCC 5 cut(s) 364, 370, 670, 801, 1208
Sse9I AATT 8 cut(s) 19, 153, 380, 753, 955, 1183, 1220, 1330
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 8 cut(s) 366, 372, 435, 500, 547, 719, 1066, 1256
StyI CCWWGG 4 cut(s) 633, 1041, 1105, 1263
TaaI ACNGT 1 cut(s) 1298
TaiI ACGT 4 cut(s) 252, 258, 264, 1249
TaqI TCGA 7 cut(s) 240, 252, 258, 264, 270, 497, 657
TaqII GACCGA 2 cut(s) 215, 687
TasI AATT 8 cut(s) 19, 153, 380, 753, 955, 1183, 1220, 1330
TatI WGTACW 1 cut(s) 689
TauI GCSGC 4 cut(s) 71, 74, 338, 341
TfiI GAWTC 1 cut(s) 585
Tru1I TTAA 2 cut(s) 156, 1119
Tru9I TTAA 2 cut(s) 156, 1119
TscAI CASTG 2 cut(s) 811, 1257
TseFI GTSAC 4 cut(s) 487, 568, 577, 815
TseI GCWGC 2 cut(s) 304, 1151
Tsp45I GTSAC 4 cut(s) 487, 568, 577, 815
TspDTI ATGAA 1 cut(s) 1257
TspGWI ACGGA 3 cut(s) 128, 217, 614
TspRI CASTG 2 cut(s) 811, 1257
VpaK11BI GGWCC 5 cut(s) 364, 370, 670, 801, 1208
XagI CCTNNNNNAGG 1 cut(s) 632
XapI RAATTY 2 cut(s) 955, 1220
XcmI CCANNNNNNNNNTGG 1 cut(s) 727
XmiI GTMKAC 6 cut(s) 252, 258, 264, 497, 639, 1163
XmnI GAANNNNTTC 2 cut(s) 851, 1224
ZraI GACGTC 3 cut(s) 250, 256, 262
ZrmI AGTACT 1 cut(s) 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.