Rorug05G0269400

SPRY domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0011366
Physical Location & Seq
Forward (+)
30385781 .. 30388494
2714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0269400.1

Sequence Viewer

Length: 2616 bp
ATGGAGTTTGCCACCAGCATTGCAGAGAACGTCTTGGGTAGGCTAGCTTCCTATGCTTCCCAAGAGATCTCCTTGGCATGGGGTGCCCAACTTGAGCTCACCAAGCTCAGTAAGACCTTATCTACCATCAAACTAGTGCTTCAGGATGCAGAGAAGAAGCAAGTGAAGAATCCCCTAATCACTCATTGGTTGGGAAATCTCAAAGATGTTTGCCATGACGTTGATGATGTCCTTGACGAACTAGAGTTTCAAAAGCTGCGAAAGAAAGTTCTGGTCAACAACCGTGGGATTGTCAAAGGAAAGGTATGCCAATTTTTTTCACGTTGGAATCCAGTTGTGTTTAACTTTAAGATGGGACATAAAGTGAAAGAGATTAGAGAACAATTACTTGAGATTGAAAATGATAAGAGAGAGTTTGCTCTTGTCGAAGTTGCTAATATATCTGAAGATCATCATGTGTCCCAAGGGAAGCACAATAATAAAAGAGAGACTGATTCTTTGGTGGAGGCTTCAGATGTTATTGGGAGAGATGATGATAAAAAACAGATTATTAGCTATCTCTTAAATAACACTGTTATCTCTAGTGAGGAACATGTTTCTATTATTTCCGTTCTTGGGCTAGGAGGGTTGGGAAAGACAACTCTTGCTAAATTAGTGTACAATGATAGCATGGTAGAGGAGAATTTTGAGATGAAAATGTGGATATGTGTCTCAGAGAATTTTGATGTCCAAACATTAATTCGTGGCATTATCAATGCTGCAATTGAACAAAAATGTGAGGATGATAGTTTGGACCGTATGAAAAGAAGGTTGCAAGATACTTTGAGAGGTAGAAAGTTTTTGTTAGTGTTGGATGATGTCTGGGATACGGAGTTAATTGGAGTAACGATTGAAAAATGGATTGATCTAAAAGTTTTGTTAAATGTGGGAGCTAATGGAAGTAAAATCATCCTAACAACAAGAAATAAATCAGTTGCTTTACTTGTGTGTCCCTTATACATGCACCCCTTAGAAGGTCTTCCCCACAAAGACTGCATGTCCTTGTTCATCAAAAAGGCATTTAAGAAAGGAGAGGAGCAACGCTATCAACATTTGATAGAAATTGGAGAGGATATTGTGAAGAAGTGTGGAGGAGTTCCTTTAGCAGTAGCTACTGTAGGGAGCATGCTCTATTTGAAAGTAGAGCGACACTATTGGTTAAGTGTCAGAGACGATGAAATGTGGAATATAGGAAATGACAATATTCTACCTGCATTAAAATTGAGTTATGACGCATTGCCACCATACTTGAAATCATGTTTTGCCTTTTGTTCACTGTTCCCTAAGGGTTTTGAATTCAATAGTGCAACATTAACCTGCTTTTGGATGGCACAAGGTTATCTCAAAATTTCTGACAAAACTCAAAATTTTGAACAAATGGGTTTAGACTATGTACGGCAGTTTTGTTCTAGATGTTTGTTTCAAGTTGACCAAGATTTCAAAACAGTCGTGATTTCTAAAATTCATGATCTAGTTCATGATTTAGCAATTTCAGTGGCCCAAGTAGAGTTCTCCACCATTAATTGTCGTCCCTCTAGTACTTTTGAAAAGGTCAGACATGTGTCGATATCTGAGGAGGATTTATCCCAAATTCCCAATTTCATGCTCCAGTCAAGAAAATTGCGAACCATTCTAAGTTTTGATGATGATTGCCAGATCATAAATCAACGTTTCTTAAAGACATGCATCTCAAATTTCAAGTATATGCGGGTTCTAGATTTGAGTGGGTCGCTTCTTGAGGAGTTACCAAGTTCCATTGGTAGGTTGTGTCACTTAAGATCTCTCGATTTGTCTTGTAATGATAAGATCAAATGGCTTCCGAAATCCATCTGTGAGCTACTGAATTTACAGTCCTTAAACCTTGGGTTCTGTGATGCACTTGAGGAGATACCCAAAGACATTGGGAACCTGATCAATCTCATATACCTGGTGATAACTACAAAGCAGATGTACTTGCCAAAATCAATGAGACGCCTTAAGGTACTTCAATCTTTATGGTTTTGCCAATGTGTCAATCTTATATCATTGGGCGAAGAGATCCAGTACCTCACTAACCTTGGTAAACTGTTTATTACTAGCTGTGAAAATTTGGAATCATTTCCACCAAATTTGAAACACTTGACCGCATTAGATACTTTGGGTATTGGTGGTTGTGAGAAGTTACAGTTGATGAGCTTGGAGGAAGGCCCTCAAGGCCTTCGATCATTGCAGATCACTAATTCTGATTTGGAGGCTTTGCCCCCTTGGATTGAAGATTCTGCAGCAACTTTACAGAGCATATCATTGGAATACTGTAATAATCTGTCCAAACTTCTGGACTTGGAAAACTTTACATTCCTCGAGCATCTACAAATTGTAGACTGCTCCAAGTTGTTTGCTCTGCCACCAGGGTTGCATCTCCTAACTGAGTTGAGAGAATTGAAGATCAGTGGGTGTCCTAAATTAAGCAGAAGCTGCAAAAGGCAACTAAAAGGTGAGGATTGGTCAAAGATGGCACGTCACGCAAAGATTAAGCTTGATGATGTGAATACTGATGATGAAGAAGACGAAGATGAAGGTACACCAATGATCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0002376 GO:0002520 GO:0002682 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008284 GO:0008757 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018130 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0022607 GO:0030097 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0034708 GO:0034968 GO:0035097 GO:0036211 GO:0042054 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045595 GO:0045637 GO:0045652 GO:0046483 GO:0048188 GO:0048316 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048522 GO:0048534 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051568 GO:0051716 GO:0060255 GO:0060776 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080182 GO:0090304 GO:0097159 GO:0097659 GO:0099402 GO:0140096 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1903506 GO:1903706 GO:1904837 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04212 ko04934 map04212 map04934
Pfam Domains
Protein Families
SPRY

Protein Analysis

871

Amino Acids

99.22

Weight (kDa)

5.7

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 94 8.7e-21 Rx N-terminal domain
NB-ARC PF00931 195 - 356 2.4e-32 NB-ARC domain
WHD_DRP PF23559 439 - 509 9.4e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 574 - 775 1.5e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 743 - 801 3.7e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G51450
fragaria_vesca FvH4_3g28490 FvH4_3g28490 FvH4_3g28490
malus_domestica MD03G1172400.v1.1 MD11G1190300.v1.1
prunus_persica Prupe.4G254200_v2.0.a1
pyrus_communis pycom03g12960 pycom11g16680
rosa_chinensis RchiOBHm_Chr5g0052831
rosa_laevigata RLG00000034789
rosa_multiflora Rmu_ssc0000311.1_g000014
rosa_roxburghii Rroxscaffold_1G00028660
rosa_rugosa Rorug05G0269300 Rorug05G0269400
rosa_samantha Rh5AG341400 Rh5BG352100 Rh5CG378800 Rh5DG368400
rosa_wichuraiana Rw5G032190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1258, 1364
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 1 cut(s) 2397
AciI CCGC 2 cut(s) 1747, 2163
AclI AACGTT 1 cut(s) 1708
AclWI GGATC 1 cut(s) 2071
AcuI CTGAAG 3 cut(s) 125, 465, 495
AcyI GRCGYC 1 cut(s) 2011
AfaI GTAC 7 cut(s) 659, 1434, 1579, 1991, 2022, 2084, 2599
AfiI CCNNNNNNNGG 5 cut(s) 78, 615, 1013, 1362, 1800
AflII CTTAAG 2 cut(s) 1813, 2015
AflIII ACRYGT 2 cut(s) 592, 1597
AhdI GACNNNNNGTC 1 cut(s) 1036
AhlI ACTAGT 1 cut(s) 133
AjiI CACGTC 1 cut(s) 2537
AjnI CCWGG 2 cut(s) 1965, 2425
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 4 cut(s) 482, 715, 1203, 2002
AlwI GGATC 1 cut(s) 2071
AlwNI CAGNNNCTG 1 cut(s) 2493
Ama87I CYCGRG 1 cut(s) 2378
AoxI GGCC 3 cut(s) 1536, 2224, 2233
ApeKI GCWGC 4 cut(s) 256, 758, 2300, 2493
ArsI GACNNNNNNTTYG 2 cut(s) 481, 513
AseI ATTAAT 2 cut(s) 737, 1560
Asp700I GAANNNNTTC 2 cut(s) 1017, 2136
AspS9I GGNCC 3 cut(s) 793, 1537, 2225
AsuHPI GGTGA 3 cut(s) 91, 1981, 2525
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 1 cut(s) 2378
AvaII GGWCC 1 cut(s) 793
AxyI CCTNAGG 1 cut(s) 1323
BaeGI GKGCMC 1 cut(s) 88
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 99
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 2 cut(s) 1010, 2589
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 4 cut(s) 243, 745, 2312, 2480
BccI CCATC 5 cut(s) 134, 346, 1360, 1874, 2524
BceAI ACGGC 1 cut(s) 1451
BciT130I CCWGG 2 cut(s) 1967, 2427
BciVI GTATCC 1 cut(s) 859
BclI TGATCA 1 cut(s) 1950
BcoDI GTCTC 4 cut(s) 482, 715, 1203, 2002
BcuI ACTAGT 1 cut(s) 133
BfmI CTRYAG 2 cut(s) 1155, 2298
BfrI CTTAAG 2 cut(s) 1813, 2015
BfuAI ACCTGC 2 cut(s) 1258, 1364
BfuI GTATCC 1 cut(s) 859
BglI GCCNNNNNGGC 1 cut(s) 2232
BglII AGATCT 2 cut(s) 66, 1817
BisI GCNGC 4 cut(s) 257, 759, 2301, 2494
BlsI GCNGC 4 cut(s) 258, 760, 2302, 2495
BmcAI AGTACT 1 cut(s) 1579
Bme1390I CCNGG 2 cut(s) 1967, 2427
Bme18I GGWCC 1 cut(s) 793
BmeRI GACNNNNNGTC 1 cut(s) 1036
BmeT110I CYCGRG 1 cut(s) 2378
BmgBI CACGTC 1 cut(s) 2537
BmgT120I GGNCC 3 cut(s) 793, 1537, 2225
BmiI GGNNCC 2 cut(s) 85, 1946
BmrFI CCNGG 2 cut(s) 1967, 2427
BmsI GCATC 5 cut(s) 136, 1734, 1903, 2392, 2443
BmtI GCTAGC 1 cut(s) 47
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 2 cut(s) 1010, 2589
BpmI CTGGAG 1 cut(s) 1631
BpuEI CTTGAG 5 cut(s) 113, 410, 1796, 1940, 2214
BsaHI GRCGYC 1 cut(s) 2011
BsaJI CCNNGG 7 cut(s) 72, 283, 463, 1900, 2095, 2282, 2426
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 615, 1013, 1362, 1800
Bse1I ACTGG 3 cut(s) 332, 1648, 2080
Bse21I CCTNAGG 1 cut(s) 1323
Bse3DI GCAATG 3 cut(s) 18, 1274, 2243
BseBI CCWGG 2 cut(s) 1967, 2427
BseDI CCNNGG 7 cut(s) 72, 283, 463, 1900, 2095, 2282, 2426
BseGI GGATG 5 cut(s) 151, 787, 859, 948, 1371
BseLI CCNNNNNNNGG 5 cut(s) 78, 615, 1013, 1362, 1800
BseMI GCAATG 3 cut(s) 18, 1274, 2243
BseMII CTCAG 4 cut(s) 121, 726, 1602, 2436
BseNI ACTGG 3 cut(s) 332, 1648, 2080
BseRI GAGGAG 6 cut(s) 692, 1088, 1146, 1628, 1793, 1937
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 4 cut(s) 243, 745, 2312, 2480
BshFI GGCC 3 cut(s) 1538, 2226, 2235
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 2378
BslFI GGGAC 4 cut(s) 369, 445, 975, 1554
BslI CCNNNNNNNGG 5 cut(s) 78, 615, 1013, 1362, 1800
BsmAI GTCTC 4 cut(s) 482, 715, 1203, 2002
BsmBI CGTCTC 2 cut(s) 1203, 2002
BsmFI GGGAC 4 cut(s) 369, 445, 975, 1554
BsnI GGCC 3 cut(s) 1538, 2226, 2235
BsoBI CYCGRG 1 cut(s) 2378
Bsp1286I GDGCHC 2 cut(s) 88, 99
Bsp1407I TGTACA 1 cut(s) 657
BspACI CCGC 2 cut(s) 1747, 2163
BspANI GGCC 3 cut(s) 1538, 2226, 2235
BspCNI CTCAG 4 cut(s) 120, 725, 1603, 2437
BspHI TCATGA 2 cut(s) 1504, 1516
BspLI GGNNCC 2 cut(s) 85, 1946
BspMAI CTGCAG 1 cut(s) 2302
BspMI ACCTGC 2 cut(s) 1258, 1364
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 2071
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 2 cut(s) 1813, 2015
BsrDI GCAATG 3 cut(s) 18, 1274, 2243
BsrGI TGTACA 1 cut(s) 657
BsrI ACTGG 3 cut(s) 332, 1648, 2080
BssECI CCNNGG 7 cut(s) 72, 283, 463, 1900, 2095, 2282, 2426
BssNI GRCGYC 1 cut(s) 2011
BssT1I CCWWGG 5 cut(s) 72, 463, 1900, 2095, 2282
Bst2UI CCWGG 2 cut(s) 1967, 2427
Bst6I CTCTTC 1 cut(s) 2067
BstACI GRCGYC 1 cut(s) 2011
BstAFI CTTAAG 2 cut(s) 1813, 2015
BstAPI GCANNNNNTGC 2 cut(s) 83, 2493
BstAUI TGTACA 1 cut(s) 657
BstC8I GCNNGC 2 cut(s) 45, 1166
BstDEI CTNAG 7 cut(s) 107, 712, 1009, 1323, 1611, 1673, 2445
BstDSI CCRYGG 1 cut(s) 283
BstF5I GGATG 5 cut(s) 151, 787, 859, 948, 1371
BstMAI GTCTC 4 cut(s) 482, 715, 1203, 2002
BstMWI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 2232, 2493, 2540
BstNI CCWGG 2 cut(s) 1967, 2427
BstNSI RCATGY 6 cut(s) 596, 1003, 1039, 1168, 1601, 1725
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSCI CCNGG 2 cut(s) 1965, 2425
BstSFI CTRYAG 2 cut(s) 1155, 2298
BstSLI GKGCMC 1 cut(s) 88
BstV1I GCAGC 4 cut(s) 243, 745, 2312, 2480
BstV2I GAAGAC 2 cut(s) 1010, 2589
BstX2I RGATCY 3 cut(s) 66, 1817, 2076
BstXI CCANNNNNNTGG 1 cut(s) 2353
BstYI RGATCY 3 cut(s) 66, 1817, 2076
Bsu36I CCTNAGG 1 cut(s) 1323
BsuI GTATCC 1 cut(s) 859
BsuRI GGCC 3 cut(s) 1538, 2226, 2235
BtgI CCRYGG 1 cut(s) 283
BtrI CACGTC 1 cut(s) 2537
BtsCI GGATG 5 cut(s) 151, 787, 859, 948, 1371
BtsIMutI CAGTG 4 cut(s) 570, 1313, 1539, 2473
BveI ACCTGC 2 cut(s) 1258, 1364
Cac8I GCNNGC 2 cut(s) 45, 1166
CaiI CAGNNNCTG 1 cut(s) 2493
CciI TCATGA 2 cut(s) 1504, 1516
Cfr13I GGNCC 3 cut(s) 793, 1537, 2225
CseI GACGC 2 cut(s) 1280, 2019
CsiI ACCWGGT 1 cut(s) 1965
Csp6I GTAC 7 cut(s) 658, 1433, 1578, 1990, 2021, 2083, 2598
CviQI GTAC 7 cut(s) 658, 1433, 1578, 1990, 2021, 2083, 2598
DdeI CTNAG 7 cut(s) 107, 712, 1009, 1323, 1611, 1673, 2445
DriI GACNNNNNGTC 1 cut(s) 1036
Eam1104I CTCTTC 1 cut(s) 2067
Eam1105I GACNNNNNGTC 1 cut(s) 1036
EarI CTCTTC 1 cut(s) 2067
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 5 cut(s) 72, 463, 1900, 2095, 2282
Eco147I AGGCCT 1 cut(s) 2235
Eco24I GRGCYC 1 cut(s) 99
Eco32I GATATC 1 cut(s) 1608
Eco47I GGWCC 1 cut(s) 793
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 3 cut(s) 125, 465, 495
Eco81I CCTNAGG 1 cut(s) 1323
Eco88I CYCGRG 1 cut(s) 2378
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 2225
EcoRI GAATTC 1 cut(s) 1334
EcoRII CCWGG 2 cut(s) 1965, 2425
EcoRV GATATC 1 cut(s) 1608
EcoT14I CCWWGG 5 cut(s) 72, 463, 1900, 2095, 2282
EcoT22I ATGCAT 1 cut(s) 1727
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 5 cut(s) 72, 463, 1900, 2095, 2282
Esp3I CGTCTC 2 cut(s) 1203, 2002
FaqI GGGAC 4 cut(s) 369, 445, 975, 1554
FauI CCCGC 1 cut(s) 1740
FbaI TGATCA 1 cut(s) 1950
FblI GTMKAC 1 cut(s) 2397
Fnu4HI GCNGC 4 cut(s) 257, 759, 2301, 2494
FokI GGATG 5 cut(s) 158, 794, 866, 935, 1378
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 4 cut(s) 257, 759, 2301, 2494
GluI GCNGC 4 cut(s) 257, 759, 2301, 2494
GsuI CTGGAG 1 cut(s) 1631
HaeIII GGCC 3 cut(s) 1538, 2226, 2235
HgaI GACGC 2 cut(s) 1280, 2019
Hin1I GRCGYC 1 cut(s) 2011
HincII GTYRAC 2 cut(s) 277, 1468
HindII GTYRAC 2 cut(s) 277, 1468
HindIII AAGCTT 1 cut(s) 2552
HinfI GANTC 5 cut(s) 169, 328, 494, 2132, 2294
HphI GGTGA 3 cut(s) 91, 1981, 2525
Hpy166II GTNNAC 7 cut(s) 277, 658, 1313, 1468, 2102, 2398, 2600
Hpy188I TCNGA 9 cut(s) 445, 514, 715, 1208, 1393, 1595, 1612, 1860, 2263
Hpy8I GTNNAC 7 cut(s) 277, 658, 1313, 1468, 2102, 2398, 2600
HpyAV CCTTC 5 cut(s) 801, 1007, 2216, 2246, 2588
HpyCH4IV ACGT 5 cut(s) 30, 219, 322, 1708, 2536
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 2232, 2493, 2540
HpyF3I CTNAG 7 cut(s) 107, 712, 1009, 1323, 1611, 1673, 2445
HpySE526I ACGT 5 cut(s) 30, 219, 322, 1708, 2536
Hsp92I GRCGYC 1 cut(s) 2011
Ksp22I TGATCA 1 cut(s) 1950
LmnI GCTCC 5 cut(s) 929, 1075, 1161, 1650, 2408
Lsp1109I GCAGC 4 cut(s) 243, 745, 2312, 2480
LweI GCATC 5 cut(s) 136, 1734, 1903, 2392, 2443
MabI ACCWGGT 1 cut(s) 1965
MaeII ACGT 5 cut(s) 30, 219, 322, 1708, 2536
MaeIII GTNAC 5 cut(s) 883, 1782, 1808, 2199, 2537
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 3 cut(s) 66, 1817, 2076
MhlI GDGCHC 2 cut(s) 88, 99
MmeI TCCRAC 2 cut(s) 305, 831
Mph1103I ATGCAT 1 cut(s) 1727
MroXI GAANNNNTTC 2 cut(s) 1017, 2136
MspCI CTTAAG 2 cut(s) 1813, 2015
MspR9I CCNGG 2 cut(s) 1967, 2427
MunI CAATTG 1 cut(s) 762
MvaI CCWGG 2 cut(s) 1967, 2427
MwoI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 2232, 2493, 2540
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 2 cut(s) 85, 1946
NmuCI GTSAC 2 cut(s) 1808, 2537
NsiI ATGCAT 1 cut(s) 1727
NspI RCATGY 6 cut(s) 596, 1003, 1039, 1168, 1601, 1725
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 1 cut(s) 2378
PagI TCATGA 2 cut(s) 1504, 1516
PceI AGGCCT 1 cut(s) 2235
PciI ACATGT 2 cut(s) 592, 1597
PdmI GAANNNNTTC 2 cut(s) 1017, 2136
PfeI GAWTC 5 cut(s) 169, 328, 494, 2132, 2294
PkrI GCNGC 4 cut(s) 258, 760, 2302, 2495
PscI ACATGT 2 cut(s) 592, 1597
PshAI GACNNNNGTC 1 cut(s) 1600
PshBI ATTAAT 2 cut(s) 737, 1560
Psp124BI GAGCTC 1 cut(s) 99
Psp1406I AACGTT 1 cut(s) 1708
Psp6I CCWGG 2 cut(s) 1965, 2425
PspGI CCWGG 2 cut(s) 1965, 2425
PspN4I GGNNCC 2 cut(s) 85, 1946
PspPI GGNCC 3 cut(s) 793, 1537, 2225
PspXI VCTCGAGB 1 cut(s) 2378
PstI CTGCAG 1 cut(s) 2302
PstNI CAGNNNCTG 1 cut(s) 2493
PsuI RGATCY 3 cut(s) 66, 1817, 2076
RsaI GTAC 7 cut(s) 659, 1434, 1579, 1991, 2022, 2084, 2599
RsaNI GTAC 7 cut(s) 658, 1433, 1578, 1990, 2021, 2083, 2598
SacI GAGCTC 1 cut(s) 99
SatI GCNGC 4 cut(s) 257, 759, 2301, 2494
Sau96I GGNCC 3 cut(s) 793, 1537, 2225
ScaI AGTACT 1 cut(s) 1579
ScrFI CCNGG 2 cut(s) 1967, 2427
SduI GDGCHC 2 cut(s) 88, 99
SexAI ACCWGGT 1 cut(s) 1965
SfaNI GCATC 5 cut(s) 136, 1734, 1903, 2392, 2443
SfcI CTRYAG 2 cut(s) 1155, 2298
SfiI GGCCNNNNNGGCC 1 cut(s) 2232
Sfr274I CTCGAG 1 cut(s) 2378
SinI GGWCC 1 cut(s) 793
SlaI CTCGAG 1 cut(s) 2378
SmlI CTYRAG 8 cut(s) 92, 389, 1775, 1813, 1919, 2015, 2229, 2378
SmoI CTYRAG 8 cut(s) 92, 389, 1775, 1813, 1919, 2015, 2229, 2378
SpeI ACTAGT 1 cut(s) 133
SphI GCATGC 1 cut(s) 1168
SseBI AGGCCT 1 cut(s) 2235
SsiI CCGC 2 cut(s) 1747, 2163
SspI AATATT 1 cut(s) 1243
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 2235
StyD4I CCNGG 2 cut(s) 1965, 2425
StyI CCWWGG 5 cut(s) 72, 463, 1900, 2095, 2282
TaiI ACGT 5 cut(s) 33, 222, 325, 1711, 2539
TaqI TCGA 6 cut(s) 426, 1604, 1824, 2239, 2379, 2610
TatI WGTACW 3 cut(s) 657, 1577, 1989
TfiI GAWTC 5 cut(s) 169, 328, 494, 2132, 2294
TscAI CASTG 4 cut(s) 577, 1320, 1539, 2473
TseFI GTSAC 2 cut(s) 1808, 2537
TseI GCWGC 4 cut(s) 256, 758, 2300, 2493
Tsp45I GTSAC 2 cut(s) 1808, 2537
TspDTI ATGAA 9 cut(s) 707, 815, 1036, 1230, 1493, 1505, 1630, 2592, 2607
TspGWI ACGGA 2 cut(s) 598, 884
TspRI CASTG 4 cut(s) 577, 1320, 1539, 2473
Vha464I CTTAAG 2 cut(s) 1813, 2015
VpaK11BI GGWCC 1 cut(s) 793
VspI ATTAAT 2 cut(s) 737, 1560
XbaI TCTAGA 2 cut(s) 1448, 1753
XceI RCATGY 6 cut(s) 596, 1003, 1039, 1168, 1601, 1725
XhoI CTCGAG 1 cut(s) 2378
XmiI GTMKAC 1 cut(s) 2397
XmnI GAANNNNTTC 2 cut(s) 1017, 2136
ZrmI AGTACT 1 cut(s) 1579
Zsp2I ATGCAT 1 cut(s) 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.