Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0013140

Physical Location & Seq

Genomic Coordinates Reverse (-)

94008180 .. 94010752

Gene Structure 2573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00072990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGCAAAGTCGTCGTCGTCGTCGTCCTCCTCGACGGCGTCGTTTCCGCCTCTCAAGCCCAACGACTACTCCCACAGCCGCGTCCACTATGCCGTCGTTTTGGCAGACCACACCACTCTCTCCCGAATCGTCTCCACGCTCCCCCGCCTCGCCGATCCGACTCAGATCCACTCCGAGTCCGACTCGCTCTCCCAGGAGCGTGTCGCTGATAAGATCTCCGCCGTGCTCGACCGCCGCGACGTCCCTCACAGAGAAACCCCTCTCCATCTTGCTGTCCGGTTAAACGACGCCGTTTCGGCCAAAATCCTCGCCTCCGCGGGCGCCGACGTGTCGCTGCAGAACGGCGCCGGGTGGAACCCCTTGCAGGAGGCTCTCTGCCGCCGGAGCTCCGAGATCGCCTTGATCTTGCTCAAGCTCCACCACCGCTCCGCCTGGGCCAAGTGGCGCCGCCGCCTGCCACGTGTCATCGCGGTGCTGCGGAGAATGCGGGACTTCTACATGGAGATCTCGTTCCACTTCGAGAGCTCCGTCATTCCGTTCGTCGGGAAAATCGCTCCGTCCGACACGTACAAGATCTGGAAGCGCGACGGGAACCTACGCGCCGACACTTCGTTGGCCGGGTTCGACGGCCTGAAGATCCAGCGCGCCGATCAGAGCTTCCTCTTCCTCGGCGACGGCGACCAGGCTCACGACGTTCCGGCGGGGTCACTGCTCGTCCTCAACCGCGACGACCGAAAAATCTTCGACGCCTTCGAGAACGCCGGGTCGCCGATGACCGAGTCCGACATCGCCGGATTCTGCTCCCAGACAAGCGTCTACCGCCCCGGCATGGACGTCACCAGAGCCGAGCTCGTCGGCCGGACCAATTGGCGACGGCAGGAGAAGACCGAATCCGTCGGAGAGTGGAAGGCCAGAGTCTTCGAAATGCACAACGTCGTCTTCAGCTTCCGGTCCCGGAAAGTCGCCAATCCCGATAATGCTGACGTGGCGGCGGGGAGCGAGCAGGTCCTCCCTCTAGAGCTAGACGAAGACGACGACGGGTTTTTAGTGGCGGAGAATCCGAGCATGTTCGGAATCCCCGACGGCCGGAGGCACAGTAGCTTCGTCAGAGAGGACCGGGAGTTCGTGGGATTGGGGAGAAAAAGCGTCGACGTGACGTTTCAGCCGCCGCGGAGGTCCATGGCGGCGACCGTTACGGCGGCGCCGGTCCAGACGAAAGAGAAAGAGTACGTCAAGAGCCTGAGACCCTCCGTTTGGCTAACGGACCATTTTCCGTTAAAGACGGAGGAGCTGCTGCCGTTACTGGATATTCTGGCGAGTAAAGTGAAGGCGGTTAGGAGAATGAGGGAGCTGCTCACTACCAAGTTCCCGCCAGGGACGTTTCCGGTGAAGCTGGCGATACCGGTGGTGCCCACAGTGAGAGTGGTGATAACATTCACCAAGTTCGTTGAGCTACAACCAACTGAGCAGTTCTTCACTCCAATGTCGAGCCCTAGGCAGTTGTTAAGGGGACAACAGCAAGAGGAGGAGCACAAGAGCAAGACGACGACTCAGAAACCTTCTGGGTCGTCGTGGTTGAGGCGGACCAGCAGCCAGTCCGCGTCGGCCACGAGCAAGCAGCAACACCAGCATTCTGCTGCGGCGGGGTGGCAGGAGCCGGAGCCTTTTGCCATTCCTAGTGGTTATACGTGGACTAGTATCGATGACAAGTCTCGGAAGATGAGGAAATCAAAATCGATTAGGAAATCTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006621 GO:0008104 GO:0008150 GO:0009889 GO:0009987 GO:0010556 GO:0010869 GO:0010941 GO:0012505 GO:0019222 GO:0031323 GO:0032507 GO:0033036 GO:0033365 GO:0034613 GO:0035437 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045185 GO:0048471 GO:0050789 GO:0050794 GO:0051179 GO:0051235 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0070972 GO:0072595 GO:2000209

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 GPCR_chapero_1

Protein Analysis

584

Amino Acids

65.5

Weight (kDa)

9.67

Isoelectric Point (pI)

55.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANKRD13_C	PF11904	200 - 563	1.7e-102	ANKRD13 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62050
fragaria_vesca	FvH4_3g01950
malus_domestica	MD05G1347900.v1.1 MD10G1322300.v1.1
prunus_persica	Prupe.4G019600_v2.0.a1
pyrus_communis	pycom05g31540 pycom10g27280
rosa_chinensis	RchiOBHm_Chr5g0002861
rosa_laevigata	RLG00000031066
rosa_multiflora	Rmu_sc0013603.1_g000009 Rmu_sc0020722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072990
rosa_rugosa	Rorug04G0400300
rosa_samantha	Rh5AG023200 Rh5BG025900 Rh5CG025800 Rh5DG024300
rosa_wichuraiana	Rw5G002160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	243, 837
Acc36I	ACCTGC	1 cut(s)	994
AccB1I	GGYRCC	5 cut(s)	320, 344, 444, 1201, 1408
AccBSI	CCGCTC	1 cut(s)	426
AccI	GTMKAC	2 cut(s)	816, 1149
AclWI	GGATC	3 cut(s)	149, 160, 631
AcoI	YGGCCR	5 cut(s)	297, 615, 856, 1084, 1605
AcuI	CTGAAG	2 cut(s)	653, 925
AcvI	CACGTG	1 cut(s)	461
AcyI	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
AfaI	GTAC	2 cut(s)	569, 1229
AfiI	CCNNNNNNNGG	5 cut(s)	364, 542, 829, 1086, 1254
AflIII	ACRYGT	3 cut(s)	327, 460, 564
AgeI	ACCGGT	1 cut(s)	1402
AhlI	ACTAGT	1 cut(s)	1694
AjiI	CACGTC	3 cut(s)	328, 985, 1153
AjnI	CCWGG	4 cut(s)	192, 431, 681, 1372
AloI	GAACNNNNNNTCC	4 cut(s)	494, 526, 1106, 1138
Alw21I	GWGCWC	5 cut(s)	228, 389, 527, 852, 1533
Alw26I	GTCTC	3 cut(s)	136, 1237, 1716
AlwI	GGATC	3 cut(s)	149, 160, 631
AoxI	GGCC	8 cut(s)	297, 435, 615, 628, 856, 909, 1084, 1605
ApeKI	GCWGC	8 cut(s)	334, 475, 1291, 1294, 1351, 1590, 1618, 1637
ArsI	GACNNNNNNTTYG	5 cut(s)	31, 1106, 1138, 1236, 1268
AsiGI	ACCGGT	1 cut(s)	1402
AspA2I	CCTAGG	1 cut(s)	1493
AspLEI	GCGC	8 cut(s)	323, 347, 447, 585, 602, 645, 647, 1204
AspS9I	GGNCC	9 cut(s)	435, 861, 951, 1006, 1114, 1176, 1207, 1264, 1584
AsuC2I	CCSGG	6 cut(s)	349, 619, 763, 825, 955, 1118
AsuHPI	GGTGA	4 cut(s)	829, 1399, 1429, 1438
AsuII	TTCGAA	1 cut(s)	921
AvaII	GGWCC	8 cut(s)	861, 951, 1006, 1114, 1176, 1207, 1264, 1584
AvrII	CCTAGG	1 cut(s)	1493
BaeGI	GKGCMC	1 cut(s)	1413
BanI	GGYRCC	5 cut(s)	320, 344, 444, 1201, 1408
BanII	GRGCYC	4 cut(s)	389, 527, 852, 1493
BauI	CACGAG	1 cut(s)	1609
BbrPI	CACGTG	1 cut(s)	461
BbsI	GAAGAC	4 cut(s)	890, 910, 931, 1035
Bbv12I	GWGCWC	5 cut(s)	228, 389, 527, 852, 1533
BbvI	GCAGC	8 cut(s)	321, 462, 1278, 1281, 1338, 1602, 1624, 1630
BccI	CCATC	1 cut(s)	273
BcgI	CGANNNNNNTGC	1 cut(s)	28
BciT130I	CCWGG	4 cut(s)	194, 433, 683, 1374
BcnI	CCSGG	6 cut(s)	349, 619, 763, 825, 955, 1118
BcoDI	GTCTC	3 cut(s)	136, 1237, 1716
BcuI	ACTAGT	1 cut(s)	1694
BfaI	CTAG	5 cut(s)	1016, 1022, 1494, 1677, 1695
BfmI	CTRYAG	1 cut(s)	335
BfoI	RGCGCY	4 cut(s)	324, 348, 448, 1205
BfuAI	ACCTGC	1 cut(s)	994
BglI	GCCNNNNNGGC	1 cut(s)	296
BglII	AGATCT	3 cut(s)	213, 504, 573
BlnI	CCTAGG	1 cut(s)	1493
Bme18I	GGWCC	8 cut(s)	861, 951, 1006, 1114, 1176, 1207, 1264, 1584
BmgBI	CACGTC	3 cut(s)	328, 985, 1153
BmgT120I	GGNCC	9 cut(s)	435, 861, 951, 1006, 1114, 1176, 1207, 1264, 1584
BoxI	GACNNNNGTC	1 cut(s)	812
BpiI	GAAGAC	4 cut(s)	890, 910, 931, 1035
BplI	GAGNNNNNCTC	4 cut(s)	167, 199, 834, 866
Bpu14I	TTCGAA	1 cut(s)	921
BpuEI	CTTGAG	2 cut(s)	38, 395
BpuMI	CCSGG	6 cut(s)	349, 619, 763, 825, 955, 1118
Bsa29I	ATCGAT	2 cut(s)	1701, 1736
BsaAI	YACGTR	3 cut(s)	461, 567, 1689
BsaHI	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
BsaI	GGTCTC	1 cut(s)	1237
BsaJI	CCNNGG	9 cut(s)	192, 315, 432, 667, 823, 1169, 1179, 1373, 1493
BsaWI	WCCGGW	4 cut(s)	276, 948, 1384, 1402
Bsc4I	CCNNNNNNNGG	5 cut(s)	364, 542, 829, 1086, 1254
Bse118I	RCCGGY	2 cut(s)	1204, 1402
Bse1I	ACTGG	2 cut(s)	1308, 1594
BseBI	CCWGG	4 cut(s)	194, 433, 683, 1374
BseCI	ATCGAT	2 cut(s)	1701, 1736
BseDI	CCNNGG	9 cut(s)	192, 315, 432, 667, 823, 1169, 1179, 1373, 1493
BseLI	CCNNNNNNNGG	5 cut(s)	364, 542, 829, 1086, 1254
BseMII	CTCAG	4 cut(s)	176, 1232, 1455, 1565
BseNI	ACTGG	2 cut(s)	1308, 1594
BsePI	GCGCGC	1 cut(s)	643
BseRI	GAGGAG	4 cut(s)	19, 1301, 1538, 1541
BseSI	GKGCMC	1 cut(s)	1413
BseX3I	CGGCCG	2 cut(s)	856, 1084
BseXI	GCAGC	8 cut(s)	321, 462, 1278, 1281, 1338, 1602, 1624, 1630
Bsh1285I	CGRYCG	5 cut(s)	232, 733, 859, 1087, 1191
BshFI	GGCC	8 cut(s)	299, 437, 617, 630, 858, 911, 1086, 1607
BshNI	GGYRCC	5 cut(s)	320, 344, 444, 1201, 1408
BshTI	ACCGGT	1 cut(s)	1402
BshVI	ATCGAT	2 cut(s)	1701, 1736
BsiEI	CGRYCG	5 cut(s)	232, 733, 859, 1087, 1191
BsiHKAI	GWGCWC	5 cut(s)	228, 389, 527, 852, 1533
BslFI	GGGAC	5 cut(s)	227, 503, 937, 1390, 1524
BslI	CCNNNNNNNGG	5 cut(s)	364, 542, 829, 1086, 1254
BsmAI	GTCTC	3 cut(s)	136, 1237, 1716
BsmBI	CGTCTC	1 cut(s)	136
BsmFI	GGGAC	5 cut(s)	227, 503, 937, 1390, 1524
BsmI	GAATGC	2 cut(s)	489, 1630
BsnI	GGCC	8 cut(s)	299, 437, 617, 630, 858, 911, 1086, 1607
Bso31I	GGTCTC	1 cut(s)	1237
Bsp119I	TTCGAA	1 cut(s)	921
Bsp1286I	GDGCHC	7 cut(s)	228, 389, 527, 852, 1413, 1493, 1533
Bsp143I	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
Bsp19I	CCATGG	1 cut(s)	1179
BspANI	GGCC	8 cut(s)	299, 437, 617, 630, 858, 911, 1086, 1607
BspCNI	CTCAG	4 cut(s)	175, 1233, 1456, 1564
BspDI	ATCGAT	2 cut(s)	1701, 1736
BspMAI	CTGCAG	1 cut(s)	339
BspMI	ACCTGC	1 cut(s)	994
BspPI	GGATC	3 cut(s)	149, 160, 631
BspT104I	TTCGAA	1 cut(s)	921
BspT107I	GGYRCC	5 cut(s)	320, 344, 444, 1201, 1408
BspTNI	GGTCTC	1 cut(s)	1237
BsrBI	CCGCTC	1 cut(s)	426
BsrFI	RCCGGY	2 cut(s)	1204, 1402
BsrI	ACTGG	2 cut(s)	1308, 1594
BssAI	RCCGGY	2 cut(s)	1204, 1402
BssECI	CCNNGG	9 cut(s)	192, 315, 432, 667, 823, 1169, 1179, 1373, 1493
BssHII	GCGCGC	1 cut(s)	643
BssMI	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
BssNI	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
BssSI	CACGAG	1 cut(s)	1609
BssT1I	CCWWGG	2 cut(s)	1179, 1493
Bst2BI	CACGAG	1 cut(s)	1609
Bst2UI	CCWGG	4 cut(s)	194, 433, 683, 1374
Bst4CI	ACNGT	3 cut(s)	1097, 1192, 1417
Bst6I	CTCTTC	1 cut(s)	668
BstACI	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
BstBAI	YACGTR	3 cut(s)	461, 567, 1689
BstBI	TTCGAA	1 cut(s)	921
BstC8I	GCNNGC	6 cut(s)	319, 455, 645, 1001, 1395, 1616
BstDEI	CTNAG	5 cut(s)	162, 1241, 1464, 1551, 1749
BstDSI	CCRYGG	3 cut(s)	315, 1169, 1179
BstH2I	RGCGCY	4 cut(s)	324, 348, 448, 1205
BstHHI	GCGC	8 cut(s)	323, 347, 447, 585, 602, 645, 647, 1204
BstKTI	GATC	9 cut(s)	157, 168, 216, 396, 405, 507, 576, 639, 652
BstMAI	GTCTC	3 cut(s)	136, 1237, 1716
BstMBI	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
BstMCI	CGRYCG	5 cut(s)	232, 733, 859, 1087, 1191
BstMWI	GCNNNNNNNGC	7 cut(s)	55, 296, 384, 484, 819, 986, 1627
BstNI	CCWGG	4 cut(s)	194, 433, 683, 1374
BstNSI	RCATGY	1 cut(s)	1069
BstPAI	GACNNNNGTC	1 cut(s)	812
BstSFI	CTRYAG	1 cut(s)	335
BstSLI	GKGCMC	1 cut(s)	1413
BstV1I	GCAGC	8 cut(s)	321, 462, 1278, 1281, 1338, 1602, 1624, 1630
BstV2I	GAAGAC	4 cut(s)	890, 910, 931, 1035
BstX2I	RGATCY	5 cut(s)	165, 213, 504, 573, 636
BstYI	RGATCY	5 cut(s)	165, 213, 504, 573, 636
BstZI	CGGCCG	2 cut(s)	856, 1084
Bsu15I	ATCGAT	2 cut(s)	1701, 1736
BsuRI	GGCC	8 cut(s)	299, 437, 617, 630, 858, 911, 1086, 1607
BsuTUI	ATCGAT	2 cut(s)	1701, 1736
BtgI	CCRYGG	3 cut(s)	315, 1169, 1179
BtgZI	GCGATG	2 cut(s)	451, 772
BtrI	CACGTC	3 cut(s)	328, 985, 1153
BtsI	GCAGTG	1 cut(s)	707
BtsIMutI	CAGTG	2 cut(s)	707, 1422
BveI	ACCTGC	1 cut(s)	994
Cac8I	GCNNGC	6 cut(s)	319, 455, 645, 1001, 1395, 1616
CfoI	GCGC	8 cut(s)	323, 347, 447, 585, 602, 645, 647, 1204
Cfr10I	RCCGGY	2 cut(s)	1204, 1402
Cfr13I	GGNCC	9 cut(s)	435, 861, 951, 1006, 1114, 1176, 1207, 1264, 1584
Cfr42I	CCGCGG	2 cut(s)	318, 1172
ClaI	ATCGAT	2 cut(s)	1701, 1736
CseI	GACGC	7 cut(s)	27, 70, 296, 755, 802, 1135, 1590
Csp6I	GTAC	2 cut(s)	568, 1228
CspAI	ACCGGT	1 cut(s)	1402
CviAII	CATG	4 cut(s)	499, 829, 1066, 1180
CviQI	GTAC	2 cut(s)	568, 1228
DdeI	CTNAG	5 cut(s)	162, 1241, 1464, 1551, 1749
DinI	GGCGCC	4 cut(s)	322, 346, 446, 1203
DpnI	GATC	9 cut(s)	156, 167, 215, 395, 404, 506, 575, 638, 651
DpnII	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
EaeI	YGGCCR	5 cut(s)	297, 615, 856, 1084, 1605
EagI	CGGCCG	2 cut(s)	856, 1084
Eam1104I	CTCTTC	1 cut(s)	668
EarI	CTCTTC	1 cut(s)	668
EciI	GGCGGA	5 cut(s)	36, 208, 418, 1067, 1597
Ecl136II	GAGCTC	3 cut(s)	387, 525, 850
EclXI	CGGCCG	2 cut(s)	856, 1084
Eco130I	CCWWGG	2 cut(s)	1179, 1493
Eco24I	GRGCYC	4 cut(s)	389, 527, 852, 1493
Eco31I	GGTCTC	1 cut(s)	1237
Eco47I	GGWCC	8 cut(s)	861, 951, 1006, 1114, 1176, 1207, 1264, 1584
Eco52I	CGGCCG	2 cut(s)	856, 1084
Eco53kI	GAGCTC	3 cut(s)	387, 525, 850
Eco57I	CTGAAG	2 cut(s)	653, 925
Eco72I	CACGTG	1 cut(s)	461
EcoICRI	GAGCTC	3 cut(s)	387, 525, 850
EcoO109I	RGGNCCY	1 cut(s)	1006
EcoRII	CCWGG	4 cut(s)	192, 431, 681, 1372
EcoT14I	CCWWGG	2 cut(s)	1179, 1493
EcoT38I	GRGCYC	4 cut(s)	389, 527, 852, 1493
EgeI	GGCGCC	4 cut(s)	322, 346, 446, 1203
EheI	GGCGCC	4 cut(s)	322, 346, 446, 1203
ErhI	CCWWGG	2 cut(s)	1179, 1493
Esp3I	CGTCTC	1 cut(s)	136
FaeI	CATG	4 cut(s)	502, 832, 1069, 1183
FaiI	YATR	6 cut(s)	90, 500, 830, 1067, 1181, 1686
FaqI	GGGAC	5 cut(s)	227, 503, 937, 1390, 1524
FatI	CATG	4 cut(s)	498, 828, 1065, 1179
FauI	CCCGC	7 cut(s)	152, 310, 480, 694, 985, 1377, 1636
FblI	GTMKAC	2 cut(s)	816, 1149
FriOI	GRGCYC	4 cut(s)	389, 527, 852, 1493
FspBI	CTAG	5 cut(s)	1016, 1022, 1494, 1677, 1695
GlaI	GCGC	8 cut(s)	322, 346, 446, 584, 601, 644, 646, 1203
HaeII	RGCGCY	4 cut(s)	324, 348, 448, 1205
HaeIII	GGCC	8 cut(s)	299, 437, 617, 630, 858, 911, 1086, 1607
HgaI	GACGC	7 cut(s)	27, 70, 296, 755, 802, 1135, 1590
HhaI	GCGC	8 cut(s)	323, 347, 447, 585, 602, 645, 647, 1204
Hin1I	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
Hin1II	CATG	4 cut(s)	502, 832, 1069, 1183
Hin6I	GCGC	8 cut(s)	321, 345, 445, 583, 600, 643, 645, 1202
HinP1I	GCGC	8 cut(s)	321, 345, 445, 583, 600, 643, 645, 1202
HincII	GTYRAC	1 cut(s)	1150
HindII	GTYRAC	1 cut(s)	1150
HphI	GGTGA	4 cut(s)	829, 1399, 1429, 1438
Hpy166II	GTNNAC	4 cut(s)	85, 817, 1150, 1692
Hpy8I	GTNNAC	4 cut(s)	85, 817, 1150, 1692
HpyAV	CCTTC	4 cut(s)	760, 901, 1321, 1569
HpyCH4III	ACNGT	3 cut(s)	1097, 1192, 1417
HpyCH4V	TGCA	3 cut(s)	337, 364, 928
HpyF10VI	GCNNNNNNNGC	7 cut(s)	55, 296, 384, 484, 819, 986, 1627
HpyF3I	CTNAG	5 cut(s)	162, 1241, 1464, 1551, 1749
Hsp92I	GRCGYC	9 cut(s)	38, 240, 288, 321, 345, 445, 747, 834, 1202
Hsp92II	CATG	4 cut(s)	502, 832, 1069, 1183
HspAI	GCGC	8 cut(s)	321, 345, 445, 583, 600, 643, 645, 1202
KasI	GGCGCC	4 cut(s)	320, 344, 444, 1201
KspI	CCGCGG	2 cut(s)	318, 1172
Kzo9I	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
Lsp1109I	GCAGC	8 cut(s)	321, 462, 1278, 1281, 1338, 1602, 1624, 1630
MaeI	CTAG	5 cut(s)	1016, 1022, 1494, 1677, 1695
MaeIII	GTNAC	5 cut(s)	705, 835, 1153, 1192, 1299
MalI	GATC	9 cut(s)	156, 167, 215, 395, 404, 506, 575, 638, 651
MbiI	CCGCTC	1 cut(s)	426
MboI	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
MboII	GAAGA	9 cut(s)	646, 655, 733, 895, 910, 931, 1040, 1465, 1729
MfeI	CAATTG	1 cut(s)	865
MflI	RGATCY	5 cut(s)	165, 213, 504, 573, 636
MhlI	GDGCHC	7 cut(s)	228, 389, 527, 852, 1413, 1493, 1533
MluCI	AATT	1 cut(s)	865
Mly113I	GGCGCC	4 cut(s)	321, 345, 445, 1202
MlyI	GAGTC	6 cut(s)	154, 176, 185, 788, 924, 1543
MmeI	TCCRAC	5 cut(s)	182, 204, 585, 807, 877
MseI	TTAA	3 cut(s)	281, 1277, 1505
MslI	CAYNNNNRTG	2 cut(s)	470, 1481
MspA1I	CMGCKG	2 cut(s)	317, 1171
MunI	CAATTG	1 cut(s)	865
Mva1269I	GAATGC	2 cut(s)	489, 1630
MvaI	CCWGG	4 cut(s)	194, 433, 683, 1374
MwoI	GCNNNNNNNGC	7 cut(s)	55, 296, 384, 484, 819, 986, 1627
NarI	GGCGCC	4 cut(s)	321, 345, 445, 1202
NciI	CCSGG	6 cut(s)	349, 619, 763, 825, 955, 1118
NcoI	CCATGG	1 cut(s)	1179
NdeII	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
NlaIII	CATG	4 cut(s)	502, 832, 1069, 1183
NmeAIII	GCCGAG	2 cut(s)	648, 871
NmuCI	GTSAC	3 cut(s)	705, 835, 1153
NspI	RCATGY	1 cut(s)	1069
NspV	TTCGAA	1 cut(s)	921
PauI	GCGCGC	1 cut(s)	643
PctI	GAATGC	2 cut(s)	489, 1630
PfeI	GAWTC	5 cut(s)	126, 795, 890, 1057, 1074
PflFI	GACNNNGTC	2 cut(s)	37, 778
PfoI	TCCNGGA	1 cut(s)	953
PinAI	ACCGGT	1 cut(s)	1402
PleI	GAGTC	6 cut(s)	154, 176, 184, 787, 923, 1543
PluTI	GGCGCC	4 cut(s)	324, 348, 448, 1205
PmaCI	CACGTG	1 cut(s)	461
PmlI	CACGTG	1 cut(s)	461
PpsI	GAGTC	6 cut(s)	154, 176, 184, 787, 923, 1543
Ppu21I	YACGTR	3 cut(s)	461, 567, 1689
PpuMI	RGGWCCY	1 cut(s)	1006
PshAI	GACNNNNGTC	1 cut(s)	812
Psp124BI	GAGCTC	3 cut(s)	389, 527, 852
Psp5II	RGGWCCY	1 cut(s)	1006
Psp6I	CCWGG	4 cut(s)	192, 431, 681, 1372
PspCI	CACGTG	1 cut(s)	461
PspGI	CCWGG	4 cut(s)	192, 431, 681, 1372
PspPI	GGNCC	9 cut(s)	435, 861, 951, 1006, 1114, 1176, 1207, 1264, 1584
PspPPI	RGGWCCY	1 cut(s)	1006
PstI	CTGCAG	1 cut(s)	339
PsuI	RGATCY	5 cut(s)	165, 213, 504, 573, 636
PsyI	GACNNNGTC	2 cut(s)	37, 778
PteI	GCGCGC	1 cut(s)	643
RsaI	GTAC	2 cut(s)	569, 1229
RsaNI	GTAC	2 cut(s)	568, 1228
RseI	CAYNNNNRTG	2 cut(s)	470, 1481
SacI	GAGCTC	3 cut(s)	389, 527, 852
SacII	CCGCGG	2 cut(s)	318, 1172
SalI	GTCGAC	1 cut(s)	1148
SaqAI	TTAA	3 cut(s)	281, 1277, 1505
Sau3AI	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
Sau96I	GGNCC	9 cut(s)	435, 861, 951, 1006, 1114, 1176, 1207, 1264, 1584
SchI	GAGTC	6 cut(s)	154, 176, 185, 788, 924, 1543
SduI	GDGCHC	7 cut(s)	228, 389, 527, 852, 1413, 1493, 1533
SfcI	CTRYAG	1 cut(s)	335
SfoI	GGCGCC	4 cut(s)	322, 346, 446, 1203
Sfr303I	CCGCGG	2 cut(s)	318, 1172
SfuI	TTCGAA	1 cut(s)	921
SgrBI	CCGCGG	2 cut(s)	318, 1172
SgrDI	CGTCGACG	1 cut(s)	1148
SinI	GGWCC	8 cut(s)	861, 951, 1006, 1114, 1176, 1207, 1264, 1584
SmiMI	CAYNNNNRTG	2 cut(s)	470, 1481
SmlI	CTYRAG	2 cut(s)	53, 410
SmoI	CTYRAG	2 cut(s)	53, 410
SpeI	ACTAGT	1 cut(s)	1694
Sse9I	AATT	1 cut(s)	865
SspDI	GGCGCC	4 cut(s)	320, 344, 444, 1201
SspMI	CTAG	5 cut(s)	1016, 1022, 1494, 1677, 1695
SstI	GAGCTC	3 cut(s)	389, 527, 852
StyI	CCWWGG	2 cut(s)	1179, 1493
TaaI	ACNGT	3 cut(s)	1097, 1192, 1417
TaqII	GACCGA	3 cut(s)	747, 791, 902
TasI	AATT	1 cut(s)	865
TfiI	GAWTC	5 cut(s)	126, 795, 890, 1057, 1074
Tru1I	TTAA	3 cut(s)	281, 1277, 1505
Tru9I	TTAA	3 cut(s)	281, 1277, 1505
TscAI	CASTG	2 cut(s)	714, 1422
TseFI	GTSAC	3 cut(s)	705, 835, 1153
TseI	GCWGC	8 cut(s)	334, 475, 1291, 1294, 1351, 1590, 1618, 1637
Tsp45I	GTSAC	3 cut(s)	705, 835, 1153
TspGWI	ACGGA	8 cut(s)	517, 525, 546, 883, 1240, 1263, 1277, 1298
TspRI	CASTG	2 cut(s)	714, 1422
Tth111I	GACNNNGTC	2 cut(s)	37, 778
VpaK11BI	GGWCC	8 cut(s)	861, 951, 1006, 1114, 1176, 1207, 1264, 1584
XbaI	TCTAGA	1 cut(s)	1015
XceI	RCATGY	1 cut(s)	1069
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1420
XmaJI	CCTAGG	1 cut(s)	1493
XmiI	GTMKAC	2 cut(s)	816, 1149
XspI	CTAG	5 cut(s)	1016, 1022, 1494, 1677, 1695
ZraI	GACGTC	2 cut(s)	241, 835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.