Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005786

Physical Location & Seq

Genomic Coordinates Forward (+)

94371680 .. 94377586

Gene Structure 5907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00073570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTGCCTCACTGCGCCTAATCGCCGTCGCGTTGAGACTAGTACAATGGGTGATCGCCACTCTGCTCAGCCGTGCTCTGTGACTCTGTTTCTCATTGAGTTTGTATTGTTGGGTTTGGTCTTTGCTGCTCTGCCTAGGATTAGTGGCACCACTGATGCTTCTGATGTTCAAGCTCTTCAGGTTATGTATACCTCAGTAAACAGTCCTTCTCAGCTAACTAATTGGAAAAGTAGTGGCGGCGATCCATGTGGAGAGTCATGGAAAGGGGTAACTTGTGAAGGCACAGCTGTTGTTGCAATAGAGGTTTCTGGATTAGGACTCAGCGGAACTACGGGATACTTGCTTTCCGACCTGTTATCATTGAGAAAATTAAATCTTGCAAGGAACAACTTCAGTGGGAATTTTCCATATTCCATTTCCACCATGGTTTCTCTCAATTACTTGAATGTTAGCCATAATTCGCTATCCGAGTCAATCGGAGATATTTTTGCTACTCTTGGTAGCCTTGCAACGTTGGATCTATCTCTAAACAACTTCTCTGGTGATATCCCTGCTTCCTTCAGTTCATTGTCCAATCTTTCTGCTCTCTATGTGCAGAACAACCAATTAACGGGTTCTCTCAATGCTCTTACGGGTTTGCCTTTGACTACTTTAAATGTTGCCAACAACCATTTCAGTGGATGGATACCCCGAGAGCTTAGCTCAGTTCATACTTTTATATATAATGGAAACTCCTTTGACAATGGTCCTGCTCCGCCACCGCCACCATATAACCCGCCTCCCCCAGGAAGACCCAGTCGCAATCATTCTGGACCTGGTACACGTCCACAGAGAACTGATGGAAAATCATCTGAATCGAAGAAAGGATTGACAGTTGGGGCTTTGGTGGGAATCATTGCGGGTTCTGTTTTTGTTGCTCTCATTCTCCTACTAGCTCTTTTCTTTTGCATTCGCAAAAATAAAAGGGAAGGCAGTGTTGCAAGACCTTCGAGGGGAGCAACAAATAGCTTTAGTCAAGAATTTCTTGTTGGTGAAGGTTCCCTTGGTCGTGTTTACCGAGCTGAGTTCCCCAATGGAAAGATGATGGCCATTAAGAAAATCGACAATGCAGCACTATCTCTACAAGAGGAGGATAACTTTCTTGAAGCTGTTTCAAATATGTCGCGCTTGAGGCATCCAAACATCGTTACACTGGTTGGATATTGCGCAGAACATGGACAGCGTCTTCTTGTCTATGAGTATATAGGAAATGGGAGCTTGCATGACATACTTCATTTTGCTGAAGATGGCAGCAACACACTGACATGGAATGCCCGTGTTAGGGTAGCACTTGGCACTGCTCGAGCTTTAGAGTACTTGCATGAGGTGTGCTTACCTTCAGTTGTACATAGAAACTTCAAGTCAGCAAATATTTTACTTGATGAAGAGCTCAATGCCCATCTATCCGACTGTGGCTTAGCTGCACTAACGCCAAACACAGAGCGACAGGTTTCAACTCAGATGGTAGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCCTTGTCCGGAGTATACACTGTAAAAAGTGATGTCTACAGCTTTGGGGTGGTGATGCTAGAGCTGTTGACTGGTCGCAAGCCACTAGACAGTTCAAGGGCAAGGTCAGAACAATCACTTGTAAGATGGGCTACTCCCCAACTCCATGATATAGATGCTCTAGCAAAAATGGTTGATCCTTCCCTAAATGGCATGTATCCGGCGAAATCTCTTTCACGCTTCGCTGACATCATCGCCCTTTGTGTTCAGCCGGAACCTGAATTTCGGCCTCCCATGTCTGAAGTTGTGCAAGCGCTGGTCCGCTTAGTGCAAAGAGCTAGTATGGTCAAAAGACGTTCAAGTGATGAATCTGGTTTTGCATACAGGACCCCTGATCATGAAGCAATTGACATGTCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

645

Amino Acids

69.86

Weight (kDa)

6.71

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	53 - 92	1.7e-11	Leucine rich repeat N-terminal domain
Pkinase	PF00069	340 - 609	2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	343 - 611	1.8e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22130 AT4G22130
fragaria_vesca	FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460
malus_domestica	MD05G1351900.v1.1 MD10G1326000.v1.1
prunus_persica	Prupe.4G015700_v2.0.a1 Prupe.4G015700_v2.0.a1 Prupe.4G015700_v2.0.a1
pyrus_communis	pycom05g31890 pycom10g27590 pycom10g27600
rosa_chinensis	RchiOBHm_Chr5g0002301
rosa_laevigata	RLG00000031016
rosa_multiflora	Rmu_sc0001492.1_g000010
rosa_roxburghii	Rroxscaffold_1G00073570 Rroxscaffold_1G00073600
rosa_rugosa	Rorug04G0395200
rosa_samantha	Rh5AG017900 Rh5BG020500 Rh5CG019700 Rh5DG018600
rosa_wichuraiana	Rw5G001680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1207
AccB1I	GGYRCC	1 cut(s)	146
AccI	GTMKAC	3 cut(s)	188, 1551, 1572
AccII	CGCG	2 cut(s)	30, 1165
AccIII	TCCGGA	1 cut(s)	1544
AciI	CCGC	7 cut(s)	237, 324, 755, 761, 776, 899, 1837
AclI	AACGTT	1 cut(s)	512
AclWI	GGATC	3 cut(s)	236, 525, 1706
AcoI	YGGCCR	1 cut(s)	1086
AcsI	RAATTY	3 cut(s)	400, 1019, 1796
AcuI	CTGAAG	6 cut(s)	161, 376, 544, 1302, 1362, 1836
AfaI	GTAC	4 cut(s)	43, 820, 1355, 1386
AfeI	AGCGCT	1 cut(s)	1830
AfiI	CCNNNNNNNGG	5 cut(s)	610, 785, 992, 1320, 1321
AflIII	ACRYGT	2 cut(s)	821, 1926
AgsI	TTSAA	8 cut(s)	170, 445, 1145, 1155, 1399, 1494, 1632, 1875
AhlI	ACTAGT	1 cut(s)	38
AjiI	CACGTC	1 cut(s)	824
AjnI	CCWGG	2 cut(s)	784, 814
AjuI	GAANNNNNNNTTGG	6 cut(s)	656, 688, 1011, 1026, 1043, 1058
Alw21I	GWGCWC	3 cut(s)	77, 1431, 1528
Alw26I	GTCTC	1 cut(s)	29
AlwI	GGATC	3 cut(s)	236, 525, 1706
Ama87I	CYCGRG	2 cut(s)	690, 1341
Aor13HI	TCCGGA	1 cut(s)	1544
Aor51HI	AGCGCT	1 cut(s)	1830
AoxI	GGCC	2 cut(s)	1086, 1802
ApeKI	GCWGC	4 cut(s)	125, 1109, 1290, 1460
ApoI	RAATTY	3 cut(s)	400, 1019, 1796
Asp700I	GAANNNNTTC	1 cut(s)	389
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	4 cut(s)	16, 1167, 1208, 1831
AspS9I	GGNCC	4 cut(s)	746, 812, 1834, 1902
AsuHPI	GGTGA	4 cut(s)	62, 554, 1043, 1600
AvaI	CYCGRG	2 cut(s)	690, 1341
AvaII	GGWCC	4 cut(s)	746, 812, 1834, 1902
AvrII	CCTAGG	1 cut(s)	134
BalI	TGGCCA	1 cut(s)	1088
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	1431
BbsI	GAAGAC	2 cut(s)	796, 1217
Bbv12I	GWGCWC	3 cut(s)	77, 1431, 1528
BbvI	GCAGC	4 cut(s)	112, 1121, 1302, 1447
BccI	CCATC	7 cut(s)	675, 833, 1078, 1280, 1446, 1495, 1656
BceAI	ACGGC	2 cut(s)	9, 55
BcgI	CGANNNNNNTGC	2 cut(s)	969, 1003
BciT130I	CCWGG	2 cut(s)	786, 816
BciVI	GTATCC	3 cut(s)	329, 678, 1743
BclI	TGATCA	1 cut(s)	1909
BcoDI	GTCTC	1 cut(s)	29
BcuI	ACTAGT	1 cut(s)	38
BfaI	CTAG	7 cut(s)	39, 135, 932, 1595, 1622, 1697, 1854
BfmI	CTRYAG	1 cut(s)	1573
BfoI	RGCGCY	1 cut(s)	1832
BfuI	GTATCC	3 cut(s)	329, 678, 1743
BisI	GCNGC	5 cut(s)	126, 238, 1110, 1291, 1461
BlnI	CCTAGG	1 cut(s)	134
BlpI	GCTNAGC	3 cut(s)	66, 698, 1456
BlsI	GCNGC	5 cut(s)	127, 239, 1111, 1292, 1462
BmcAI	AGTACT	1 cut(s)	1355
Bme1390I	CCNGG	2 cut(s)	786, 816
Bme18I	GGWCC	4 cut(s)	746, 812, 1834, 1902
BmeT110I	CYCGRG	2 cut(s)	690, 1341
BmgBI	CACGTC	1 cut(s)	824
BmgT120I	GGNCC	4 cut(s)	746, 812, 1834, 1902
BmiI	GGNNCC	4 cut(s)	148, 1039, 1791, 1904
BmrFI	CCNGG	2 cut(s)	786, 816
BmrI	ACTGGG	1 cut(s)	789
BmsI	GCATC	4 cut(s)	145, 1183, 1581, 1681
BmuI	ACTGGG	1 cut(s)	789
BoxI	GACNNNNGTC	1 cut(s)	744
BpiI	GAAGAC	2 cut(s)	796, 1217
BplI	GAGNNNNNCTC	2 cut(s)	686, 718
Bpu1102I	GCTNAGC	3 cut(s)	66, 698, 1456
BpuEI	CTTGAG	1 cut(s)	1189
BsaJI	CCNNGG	4 cut(s)	134, 423, 784, 1042
BsaWI	WCCGGW	1 cut(s)	1544
Bsc4I	CCNNNNNNNGG	5 cut(s)	610, 785, 992, 1320, 1321
Bse1I	ACTGG	3 cut(s)	795, 1197, 1612
Bse3DI	GCAATG	1 cut(s)	894
BseAI	TCCGGA	1 cut(s)	1544
BseBI	CCWGG	2 cut(s)	786, 816
BseDI	CCNNGG	4 cut(s)	134, 423, 784, 1042
BseGI	GGATG	2 cut(s)	686, 1174
BseLI	CCNNNNNNNGG	5 cut(s)	610, 785, 992, 1320, 1321
BseMI	GCAATG	1 cut(s)	894
BseMII	CTCAG	8 cut(s)	80, 207, 224, 334, 717, 1053, 1511, 1521
BseNI	ACTGG	3 cut(s)	795, 1197, 1612
BseRI	GAGGAG	1 cut(s)	1142
BseXI	GCAGC	4 cut(s)	112, 1121, 1302, 1447
BsgI	GTGCAG	2 cut(s)	614, 1446
Bsh1236I	CGCG	2 cut(s)	30, 1165
BshFI	GGCC	2 cut(s)	1088, 1804
BshNI	GGYRCC	1 cut(s)	146
BsiHKAI	GWGCWC	3 cut(s)	77, 1431, 1528
BsiHKCI	CYCGRG	2 cut(s)	690, 1341
BsiSI	CCGG	3 cut(s)	1545, 1736, 1787
BslI	CCNNNNNNNGG	5 cut(s)	610, 785, 992, 1320, 1321
BsmAI	GTCTC	1 cut(s)	29
BsmI	GAATGC	2 cut(s)	948, 1315
BsnI	GGCC	2 cut(s)	1088, 1804
BsoBI	CYCGRG	2 cut(s)	690, 1341
Bsp1286I	GDGCHC	3 cut(s)	77, 1431, 1528
Bsp13I	TCCGGA	1 cut(s)	1544
Bsp1407I	TGTACA	1 cut(s)	1384
Bsp143I	GATC	5 cut(s)	52, 241, 517, 1711, 1909
Bsp1720I	GCTNAGC	3 cut(s)	66, 698, 1456
Bsp19I	CCATGG	1 cut(s)	423
BspACI	CCGC	7 cut(s)	237, 324, 755, 761, 776, 899, 1837
BspANI	GGCC	2 cut(s)	1088, 1804
BspCNI	CTCAG	8 cut(s)	79, 206, 223, 333, 716, 1054, 1510, 1522
BspEI	TCCGGA	1 cut(s)	1544
BspFNI	CGCG	2 cut(s)	30, 1165
BspHI	TCATGA	1 cut(s)	1912
BspLI	GGNNCC	4 cut(s)	148, 1039, 1791, 1904
BspPI	GGATC	3 cut(s)	236, 525, 1706
BspQI	GCTCTTC	2 cut(s)	180, 1419
BspT107I	GGYRCC	1 cut(s)	146
BsrDI	GCAATG	1 cut(s)	894
BsrGI	TGTACA	1 cut(s)	1384
BsrI	ACTGG	3 cut(s)	795, 1197, 1612
BssECI	CCNNGG	4 cut(s)	134, 423, 784, 1042
BssMI	GATC	5 cut(s)	52, 241, 517, 1711, 1909
BssNAI	GTATAC	2 cut(s)	189, 1552
BssT1I	CCWWGG	3 cut(s)	134, 423, 1042
Bst1107I	GTATAC	2 cut(s)	189, 1552
Bst2UI	CCWGG	2 cut(s)	786, 816
Bst4CI	ACNGT	5 cut(s)	203, 874, 1451, 1558, 1628
Bst6I	CTCTTC	2 cut(s)	180, 1419
BstAUI	TGTACA	1 cut(s)	1384
BstC8I	GCNNGC	3 cut(s)	1259, 1616, 1827
BstDSI	CCRYGG	1 cut(s)	423
BstENI	CCTNNNNNAGG	1 cut(s)	783
BstF5I	GGATG	2 cut(s)	686, 1174
BstFNI	CGCG	2 cut(s)	30, 1165
BstH2I	RGCGCY	1 cut(s)	1832
BstHHI	GCGC	4 cut(s)	16, 1167, 1208, 1831
BstKTI	GATC	5 cut(s)	55, 244, 520, 1714, 1912
BstMAI	GTCTC	1 cut(s)	29
BstMBI	GATC	5 cut(s)	52, 241, 517, 1711, 1909
BstMWI	GCNNNNNNNGC	2 cut(s)	293, 1171
BstNI	CCWGG	2 cut(s)	786, 816
BstNSI	RCATGY	2 cut(s)	1732, 1930
BstPAI	GACNNNNGTC	1 cut(s)	744
BstSCI	CCNGG	2 cut(s)	784, 814
BstSFI	CTRYAG	1 cut(s)	1573
BstUI	CGCG	2 cut(s)	30, 1165
BstV1I	GCAGC	4 cut(s)	112, 1121, 1302, 1447
BstV2I	GAAGAC	2 cut(s)	796, 1217
BstX2I	RGATCY	1 cut(s)	517
BstXI	CCANNNNNNTGG	1 cut(s)	677
BstYI	RGATCY	1 cut(s)	517
BstZ17I	GTATAC	2 cut(s)	189, 1552
BsuI	GTATCC	3 cut(s)	329, 678, 1743
BsuRI	GGCC	2 cut(s)	1088, 1804
BtgI	CCRYGG	1 cut(s)	423
BtgZI	GCGATG	1 cut(s)	1753
BtrI	CACGTC	1 cut(s)	824
BtsCI	GGATG	2 cut(s)	686, 1174
BtsI	GCAGTG	3 cut(s)	9, 979, 1335
BtsIMutI	CAGTG	9 cut(s)	9, 150, 400, 682, 979, 1190, 1298, 1335, 1554
Cac8I	GCNNGC	3 cut(s)	1259, 1616, 1827
CciI	TCATGA	1 cut(s)	1912
CfoI	GCGC	4 cut(s)	16, 1167, 1208, 1831
Cfr13I	GGNCC	4 cut(s)	746, 812, 1834, 1902
CseI	GACGC	1 cut(s)	1211
CsiI	ACCWGGT	1 cut(s)	814
Csp6I	GTAC	4 cut(s)	42, 819, 1354, 1385
CspCI	CAANNNNNGTGG	2 cut(s)	376, 411
CviQI	GTAC	4 cut(s)	42, 819, 1354, 1385
DpnI	GATC	5 cut(s)	54, 243, 519, 1713, 1911
DpnII	GATC	5 cut(s)	52, 241, 517, 1711, 1909
DraI	TTTAAA	1 cut(s)	654
EaeI	YGGCCR	1 cut(s)	1086
Eam1104I	CTCTTC	2 cut(s)	180, 1419
EarI	CTCTTC	2 cut(s)	180, 1419
EciI	GGCGGA	1 cut(s)	744
Ecl136II	GAGCTC	1 cut(s)	1429
Eco130I	CCWWGG	3 cut(s)	134, 423, 1042
Eco24I	GRGCYC	1 cut(s)	1431
Eco32I	GATATC	1 cut(s)	547
Eco47I	GGWCC	4 cut(s)	746, 812, 1834, 1902
Eco47III	AGCGCT	1 cut(s)	1830
Eco53kI	GAGCTC	1 cut(s)	1429
Eco57I	CTGAAG	6 cut(s)	161, 376, 544, 1302, 1362, 1836
Eco88I	CYCGRG	2 cut(s)	690, 1341
EcoICRI	GAGCTC	1 cut(s)	1429
EcoNI	CCTNNNNNAGG	1 cut(s)	783
EcoO109I	RGGNCCY	1 cut(s)	1902
EcoRII	CCWGG	2 cut(s)	784, 814
EcoRV	GATATC	1 cut(s)	547
EcoT14I	CCWWGG	3 cut(s)	134, 423, 1042
EcoT38I	GRGCYC	1 cut(s)	1431
ErhI	CCWWGG	3 cut(s)	134, 423, 1042
FalI	AAGNNNNNCTT	4 cut(s)	1008, 1040, 1026, 1058
FauI	CCCGC	2 cut(s)	783, 892
FbaI	TGATCA	1 cut(s)	1909
FblI	GTMKAC	3 cut(s)	188, 1551, 1572
Fnu4HI	GCNGC	5 cut(s)	126, 238, 1110, 1291, 1461
FokI	GGATG	2 cut(s)	693, 1161
FriOI	GRGCYC	1 cut(s)	1431
Fsp4HI	GCNGC	5 cut(s)	126, 238, 1110, 1291, 1461
FspBI	CTAG	7 cut(s)	39, 135, 932, 1595, 1622, 1697, 1854
FspI	TGCGCA	1 cut(s)	1207
GlaI	GCGC	4 cut(s)	15, 1166, 1207, 1830
GluI	GCNGC	5 cut(s)	126, 238, 1110, 1291, 1461
HaeII	RGCGCY	1 cut(s)	1832
HaeIII	GGCC	2 cut(s)	1088, 1804
HapII	CCGG	3 cut(s)	1545, 1736, 1787
HgaI	GACGC	1 cut(s)	1211
HhaI	GCGC	4 cut(s)	16, 1167, 1208, 1831
Hin6I	GCGC	4 cut(s)	14, 1165, 1206, 1829
HinP1I	GCGC	4 cut(s)	14, 1165, 1206, 1829
HincII	GTYRAC	1 cut(s)	1605
HindII	GTYRAC	1 cut(s)	1605
HinfI	GANTC	7 cut(s)	82, 254, 318, 470, 854, 891, 1883
HpaII	CCGG	3 cut(s)	1545, 1736, 1787
HphI	GGTGA	4 cut(s)	62, 554, 1043, 1600
Hpy166II	GTNNAC	8 cut(s)	189, 199, 821, 827, 1054, 1552, 1573, 1605
Hpy188I	TCNGA	9 cut(s)	163, 349, 469, 479, 853, 1447, 1500, 1645, 1816
Hpy188III	TCNNGA	7 cut(s)	309, 810, 1016, 1142, 1529, 1545, 1913
Hpy8I	GTNNAC	8 cut(s)	189, 199, 821, 827, 1054, 1552, 1573, 1605
Hpy99I	CGWCG	1 cut(s)	30
HpyAV	CCTTC	8 cut(s)	216, 272, 568, 962, 996, 1028, 1386, 1725
HpyCH4III	ACNGT	5 cut(s)	203, 874, 1451, 1558, 1628
HpyCH4IV	ACGT	3 cut(s)	512, 823, 1870
HpyF10VI	GCNNNNNNNGC	2 cut(s)	293, 1171
HpySE526I	ACGT	3 cut(s)	512, 823, 1870
HspAI	GCGC	4 cut(s)	14, 1165, 1206, 1829
Kpn2I	TCCGGA	1 cut(s)	1544
Ksp22I	TGATCA	1 cut(s)	1909
Kzo9I	GATC	5 cut(s)	52, 241, 517, 1711, 1909
LguI	GCTCTTC	2 cut(s)	180, 1419
LmnI	GCTCC	4 cut(s)	757, 995, 1254, 1531
Lsp1109I	GCAGC	4 cut(s)	112, 1121, 1302, 1447
LweI	GCATC	4 cut(s)	145, 1183, 1581, 1681
MabI	ACCWGGT	1 cut(s)	814
MaeI	CTAG	7 cut(s)	39, 135, 932, 1595, 1622, 1697, 1854
MaeII	ACGT	3 cut(s)	512, 823, 1870
MaeIII	GTNAC	3 cut(s)	79, 268, 1186
MalI	GATC	5 cut(s)	54, 243, 519, 1713, 1911
MboI	GATC	5 cut(s)	52, 241, 517, 1711, 1909
MboII	GAAGA	6 cut(s)	167, 801, 871, 1217, 1295, 1436
MfeI	CAATTG	1 cut(s)	1920
MflI	RGATCY	1 cut(s)	517
MhlI	GDGCHC	3 cut(s)	77, 1431, 1528
MlsI	TGGCCA	1 cut(s)	1088
MluCI	AATT	9 cut(s)	220, 368, 400, 436, 457, 605, 1019, 1796, 1920
MluNI	TGGCCA	1 cut(s)	1088
MlyI	GAGTC	4 cut(s)	76, 263, 312, 479
MmeI	TCCRAC	4 cut(s)	372, 495, 1177, 1470
Mox20I	TGGCCA	1 cut(s)	1088
MroI	TCCGGA	1 cut(s)	1544
MroXI	GAANNNNTTC	1 cut(s)	389
MscI	TGGCCA	1 cut(s)	1088
MseI	TTAA	4 cut(s)	371, 608, 653, 1092
MslI	CAYNNNNRTG	2 cut(s)	675, 1303
Msp20I	TGGCCA	1 cut(s)	1088
MspA1I	CMGCKG	2 cut(s)	287, 324
MspI	CCGG	3 cut(s)	1545, 1736, 1787
MspR9I	CCNGG	2 cut(s)	786, 816
MunI	CAATTG	1 cut(s)	1920
Mva1269I	GAATGC	2 cut(s)	948, 1315
MvaI	CCWGG	2 cut(s)	786, 816
MvnI	CGCG	2 cut(s)	30, 1165
MwoI	GCNNNNNNNGC	2 cut(s)	293, 1171
NcoI	CCATGG	1 cut(s)	423
NdeII	GATC	5 cut(s)	52, 241, 517, 1711, 1909
NlaIV	GGNNCC	4 cut(s)	148, 1039, 1791, 1904
NmuCI	GTSAC	1 cut(s)	79
NsbI	TGCGCA	1 cut(s)	1207
NspI	RCATGY	2 cut(s)	1732, 1930
PaeR7I	CTCGAG	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	1912
PciI	ACATGT	1 cut(s)	1926
PciSI	GCTCTTC	2 cut(s)	180, 1419
PcsI	WCGNNNNNNNCGW	1 cut(s)	1054
PctI	GAATGC	2 cut(s)	948, 1315
PdmI	GAANNNNTTC	1 cut(s)	389
PfeI	GAWTC	3 cut(s)	854, 891, 1883
PflFI	GACNNNGTC	2 cut(s)	795, 1221
PkrI	GCNGC	5 cut(s)	127, 239, 1111, 1292, 1462
PleI	GAGTC	4 cut(s)	76, 262, 312, 478
PpsI	GAGTC	4 cut(s)	76, 262, 312, 478
PpuMI	RGGWCCY	1 cut(s)	1902
PscI	ACATGT	1 cut(s)	1926
PshAI	GACNNNNGTC	1 cut(s)	744
Psp124BI	GAGCTC	1 cut(s)	1431
Psp1406I	AACGTT	1 cut(s)	512
Psp5II	RGGWCCY	1 cut(s)	1902
Psp6I	CCWGG	2 cut(s)	784, 814
PspGI	CCWGG	2 cut(s)	784, 814
PspN4I	GGNNCC	4 cut(s)	148, 1039, 1791, 1904
PspPI	GGNCC	4 cut(s)	746, 812, 1834, 1902
PspPPI	RGGWCCY	1 cut(s)	1902
PspXI	VCTCGAGB	1 cut(s)	1341
PsuI	RGATCY	1 cut(s)	517
PsyI	GACNNNGTC	2 cut(s)	795, 1221
PvuII	CAGCTG	1 cut(s)	287
RsaI	GTAC	4 cut(s)	43, 820, 1355, 1386
RsaNI	GTAC	4 cut(s)	42, 819, 1354, 1385
RseI	CAYNNNNRTG	2 cut(s)	675, 1303
SacI	GAGCTC	1 cut(s)	1431
SapI	GCTCTTC	2 cut(s)	180, 1419
SaqAI	TTAA	4 cut(s)	371, 608, 653, 1092
SatI	GCNGC	5 cut(s)	126, 238, 1110, 1291, 1461
Sau3AI	GATC	5 cut(s)	52, 241, 517, 1711, 1909
Sau96I	GGNCC	4 cut(s)	746, 812, 1834, 1902
ScaI	AGTACT	1 cut(s)	1355
SchI	GAGTC	4 cut(s)	76, 263, 312, 479
ScrFI	CCNGG	2 cut(s)	786, 816
SduI	GDGCHC	3 cut(s)	77, 1431, 1528
SexAI	ACCWGGT	1 cut(s)	814
SfaNI	GCATC	4 cut(s)	145, 1183, 1581, 1681
SfcI	CTRYAG	1 cut(s)	1573
Sfr274I	CTCGAG	1 cut(s)	1341
SinI	GGWCC	4 cut(s)	746, 812, 1834, 1902
SlaI	CTCGAG	1 cut(s)	1341
SmiMI	CAYNNNNRTG	2 cut(s)	675, 1303
SmlI	CTYRAG	2 cut(s)	1168, 1341
SmoI	CTYRAG	2 cut(s)	1168, 1341
SpeI	ACTAGT	1 cut(s)	38
Sse9I	AATT	9 cut(s)	220, 368, 400, 436, 457, 605, 1019, 1796, 1920
SsiI	CCGC	7 cut(s)	237, 324, 755, 761, 776, 899, 1837
SspI	AATATT	1 cut(s)	1411
SspMI	CTAG	7 cut(s)	39, 135, 932, 1595, 1622, 1697, 1854
SstI	GAGCTC	1 cut(s)	1431
StyD4I	CCNGG	2 cut(s)	784, 814
StyI	CCWWGG	3 cut(s)	134, 423, 1042
TaaI	ACNGT	5 cut(s)	203, 874, 1451, 1558, 1628
TaiI	ACGT	3 cut(s)	515, 826, 1873
TaqI	TCGA	4 cut(s)	857, 989, 1101, 1342
TasI	AATT	9 cut(s)	220, 368, 400, 436, 457, 605, 1019, 1796, 1920
TatI	WGTACW	3 cut(s)	41, 1353, 1384
TauI	GCSGC	1 cut(s)	240
TfiI	GAWTC	3 cut(s)	854, 891, 1883
Tru1I	TTAA	4 cut(s)	371, 608, 653, 1092
Tru9I	TTAA	4 cut(s)	371, 608, 653, 1092
TscAI	CASTG	9 cut(s)	16, 157, 400, 682, 979, 1197, 1305, 1342, 1561
TseFI	GTSAC	1 cut(s)	79
TseI	GCWGC	4 cut(s)	125, 1109, 1290, 1460
Tsp45I	GTSAC	1 cut(s)	79
TspDTI	ATGAA	6 cut(s)	555, 698, 1262, 1437, 1896, 1929
TspRI	CASTG	9 cut(s)	16, 157, 400, 682, 979, 1197, 1305, 1342, 1561
Tth111I	GACNNNGTC	2 cut(s)	795, 1221
VpaK11BI	GGWCC	4 cut(s)	746, 812, 1834, 1902
XagI	CCTNNNNNAGG	1 cut(s)	783
XapI	RAATTY	3 cut(s)	400, 1019, 1796
XceI	RCATGY	2 cut(s)	1732, 1930
XcmI	CCANNNNNNNNNTGG	1 cut(s)	421
XhoI	CTCGAG	1 cut(s)	1341
XmaJI	CCTAGG	1 cut(s)	134
XmiI	GTMKAC	3 cut(s)	188, 1551, 1572
XmnI	GAANNNNTTC	1 cut(s)	389
XspI	CTAG	7 cut(s)	39, 135, 932, 1595, 1622, 1697, 1854
ZrmI	AGTACT	1 cut(s)	1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.