Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005786

Physical Location & Seq

Genomic Coordinates Reverse (-)

1272560 .. 1278635

Gene Structure 6076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG017900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGTGCCTCACTGCGCCTAATCGCCGTCGCGTTGAGACTAGTACAATGGGTGATCGCCACTCTGCTCAGCCGTGCTCTGTGACTCTGTTTCTCATTGAGTTTGTGTTGTTGGGTTTGGTCTTTGCTGCTCTGCCTAGGATTAGTGGCACCACTGATGCTTCTGATGTTCAAGCTCTTCAGGTTATGTATACCTCAGTAAACAGTCCTCCCCAGCTAACTAATTGGAAAAGTAGTGGCGGCGATCCATGTGGAGAGTCATGGAAAGGGGTAACTTGTGAAGGCACAGCTGTTGTTGCAATAGAGGTTTCTGGATTAGGACTCAGCGGAACTACGGGATACTTGCTCTCCGACCTGTTATCATTGAGAAAATTTGATTTGAGTGACAACAGTTTTCATGATACAATACCATATCAACTACCTCCAAATCTTACGAGCCTAAATCTTGCAAGGAACAACTTCAGTGGGAATTTTCCATATTCCATTTCCACCATGGTTTCTCTCAATTACTTGAATGTTAGCCATAATTCGCTATCCGAGTCAATCGGAGATATTTTTGCTACTCTTGGTAGCCTTGCAACGTTGGATCTATCTCTGAACAACTTCTCTGGTGATATCCCTGCGTCCTTCAGTTCATTGTCCAATCTTTCTGCACTCTATGTGCAGAACAATCAATTGACGGGTTCTCTCAATGCTCTTACGGGTTTGCCTTTGACTACTTTAAATGTTGCCAACAACCATTTCAGTGGATGGATACCCCGAGAGCTTAGCTCAGTTCATACTTTTATATATGATGGAAACTCCTTTGACAATGGTCCTGCTCCTCCACCGCCACCATATAACCCGCCTCCCCCAGGAAGACCCAGTCACAATCATTCTGGACCTGGTACACGTCCACAGAGAACTGATGGAAAATCATCTGAATCGAAGAAAGGATTGACAGTTGGGGCTTTGGTGGGAATCATTGCGGGTTCTGTTTTTGTTGCTCTCATTCTCCTACTAGCTCTTTTCTTTTGCATTCGCAAAAATAAAAGGGAAGGCAGTGTTGCAAGACCTTCGAGGGGAGGTCGCTCTGTTGGCACAAATAATGTAAATACTGAGATGCAAGAGCAGAGGGTAAAAAGTGCATCTGCTGTAACTGATCTCAAGCCCCCACCGGCAGAAATATTGGTGGTTGATAGGTTACATGGAAAAAATGGATCAATAAAAAGAATAAAATCACCTATCACTGCTACTCCTTATACTGTTGCCACTCTCCAAACAGCAACAAATAGCTTTAGTCAAGAATTTCTTGTTGGTGAAGGTTCCCTTGGTCGTGTTTACCGAGCTGAGTTCCCCAATGGAAAGATGATGGCCATTAAGAAAATCGACAATGCAGCACTATCTCTACAAGAGGAGGATAACTTTCTTGAAGCTGTTTCAAATATGTCGCGCTTGAGGCATCCAAACATCGTTACACTGGTTGGATATTGTGCAGAACATGGACAGCGTCTTCTAGTCTATGAGTATATAGGAAATGGGAGCTTGCATGACATACTTCATTTTGCTGAAGATGGCACTAACACACTGACATGGAATGCCCGTGTTAGGGTAGCACTTGGCACTGCTCGAGCTTTAGAGTACTTGCATGAGGTGTGCTTACCTTCAGTTGTACATAGAAACTTCAAGTCAGCAAATATTTTACTTGATGAAGAGCTCAATGCCCATCTATCTGACTGTGGCTTAGCTGCTCTAACGCCAAACACAGAGCGACAGGTTTCAACTCAGATGGTAGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCCTTGTCCGGAGTATACACTGTAAAAAGTGATGTCTACAGCTTTGGGGTGGTGATGCTAGAGCTGTTGACTGGTCGCAAGCCACTGGACAGTTCAAGGGCAAGGTCAGAACAATCACTTGTAAGATGGGCTACTCCCCAACTCCATGATATAGATGCTCTAGCAAAAATGGTTGATCCTTCCCTAAATGGCATGTATCCGGCGAAATCTCTTTCACGCTTTGCTGACATCATCGCCCTTTGTGTTCAGCCGGAACCTGAATTTCGGCCTCCCATGTCTGAAGTTGTGCAAGCGCTGGTCCGCTTAGTGCAAAGAGCTAGTATGGTCAAAAGACGTTCAAGTGATGAATCTGGTTTTGCATACAGGACCCCTGATCATGAAGCAATTGACATGTCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

733

Amino Acids

79.44

Weight (kDa)

6.64

Isoelectric Point (pI)

37.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	53 - 92	2e-11	Leucine rich repeat N-terminal domain
LRR_8	PF13855	141 - 201	6.4e-07	Leucine rich repeat
Pkinase	PF00069	428 - 697	2.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	431 - 699	2.3e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22130 AT4G22130
fragaria_vesca	FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460 FvH4_3g01460
malus_domestica	MD05G1351900.v1.1 MD10G1326000.v1.1
prunus_persica	Prupe.4G015700_v2.0.a1 Prupe.4G015700_v2.0.a1 Prupe.4G015700_v2.0.a1
pyrus_communis	pycom05g31890 pycom10g27590 pycom10g27600
rosa_chinensis	RchiOBHm_Chr5g0002301
rosa_laevigata	RLG00000031016
rosa_multiflora	Rmu_sc0001492.1_g000010
rosa_roxburghii	Rroxscaffold_1G00073570 Rroxscaffold_1G00073600
rosa_rugosa	Rorug04G0395200
rosa_samantha	Rh5AG017900 Rh5BG020500 Rh5CG019700 Rh5DG018600
rosa_wichuraiana	Rw5G001680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	146
AccI	GTMKAC	3 cut(s)	188, 1815, 1836
AccII	CGCG	2 cut(s)	30, 1429
AccIII	TCCGGA	1 cut(s)	1808
AciI	CCGC	6 cut(s)	237, 324, 827, 842, 965, 2101
AclI	AACGTT	1 cut(s)	578
AclWI	GGATC	4 cut(s)	236, 591, 1204, 1970
AcoI	YGGCCR	1 cut(s)	1350
AcsI	RAATTY	4 cut(s)	368, 466, 1283, 2060
AcuI	CTGAAG	6 cut(s)	161, 442, 610, 1566, 1626, 2100
AfaI	GTAC	4 cut(s)	43, 886, 1619, 1650
AfeI	AGCGCT	1 cut(s)	2094
AfiI	CCNNNNNNNGG	4 cut(s)	851, 1058, 1584, 1585
AflIII	ACRYGT	2 cut(s)	887, 2190
AgsI	TTSAA	8 cut(s)	170, 511, 1409, 1419, 1663, 1758, 1896, 2139
AhlI	ACTAGT	1 cut(s)	38
AjiI	CACGTC	1 cut(s)	890
AjnI	CCWGG	2 cut(s)	850, 880
AjuI	GAANNNNNNNTTGG	6 cut(s)	722, 754, 1275, 1290, 1307, 1322
Alw21I	GWGCWC	3 cut(s)	77, 1695, 1792
Alw26I	GTCTC	1 cut(s)	29
AlwI	GGATC	4 cut(s)	236, 591, 1204, 1970
Ama87I	CYCGRG	2 cut(s)	756, 1605
Aor13HI	TCCGGA	1 cut(s)	1808
Aor51HI	AGCGCT	1 cut(s)	2094
AoxI	GGCC	2 cut(s)	1350, 2066
ApeKI	GCWGC	3 cut(s)	125, 1373, 1724
ApoI	RAATTY	4 cut(s)	368, 466, 1283, 2060
Asp700I	GAANNNNTTC	2 cut(s)	455, 599
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	3 cut(s)	16, 1431, 2095
AspS9I	GGNCC	4 cut(s)	812, 878, 2098, 2166
AsuHPI	GGTGA	5 cut(s)	62, 620, 1209, 1307, 1864
AvaI	CYCGRG	2 cut(s)	756, 1605
AvaII	GGWCC	4 cut(s)	812, 878, 2098, 2166
AvrII	CCTAGG	1 cut(s)	134
BalI	TGGCCA	1 cut(s)	1352
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	1695
BbsI	GAAGAC	2 cut(s)	862, 1481
Bbv12I	GWGCWC	3 cut(s)	77, 1695, 1792
BbvI	GCAGC	3 cut(s)	112, 1385, 1711
BccI	CCATC	8 cut(s)	741, 785, 899, 1342, 1544, 1710, 1759, 1920
BceAI	ACGGC	2 cut(s)	9, 55
BcgI	CGANNNNNNTGC	2 cut(s)	1035, 1069
BciT130I	CCWGG	2 cut(s)	852, 882
BciVI	GTATCC	3 cut(s)	329, 744, 2007
BclI	TGATCA	1 cut(s)	2173
BcoDI	GTCTC	1 cut(s)	29
BcuI	ACTAGT	1 cut(s)	38
BfaI	CTAG	7 cut(s)	39, 135, 998, 1493, 1859, 1961, 2118
BfmI	CTRYAG	1 cut(s)	1837
BfoI	RGCGCY	1 cut(s)	2096
BfuI	GTATCC	3 cut(s)	329, 744, 2007
BisI	GCNGC	4 cut(s)	126, 238, 1374, 1725
BlnI	CCTAGG	1 cut(s)	134
BlpI	GCTNAGC	3 cut(s)	66, 764, 1720
BlsI	GCNGC	4 cut(s)	127, 239, 1375, 1726
BmcAI	AGTACT	1 cut(s)	1619
Bme1390I	CCNGG	2 cut(s)	852, 882
Bme18I	GGWCC	4 cut(s)	812, 878, 2098, 2166
BmeT110I	CYCGRG	2 cut(s)	756, 1605
BmgBI	CACGTC	1 cut(s)	890
BmgT120I	GGNCC	4 cut(s)	812, 878, 2098, 2166
BmiI	GGNNCC	4 cut(s)	148, 1303, 2055, 2168
BmrFI	CCNGG	2 cut(s)	852, 882
BmrI	ACTGGG	1 cut(s)	855
BmsI	GCATC	6 cut(s)	145, 1089, 1133, 1447, 1845, 1945
BmuI	ACTGGG	1 cut(s)	855
BoxI	GACNNNNGTC	1 cut(s)	810
BpiI	GAAGAC	2 cut(s)	862, 1481
BplI	GAGNNNNNCTC	2 cut(s)	752, 784
Bpu1102I	GCTNAGC	3 cut(s)	66, 764, 1720
BpuEI	CTTGAG	2 cut(s)	1127, 1453
BsaJI	CCNNGG	4 cut(s)	134, 489, 850, 1306
BsaWI	WCCGGW	1 cut(s)	1808
BsaXI	ACNNNNNCTCC	4 cut(s)	329, 359, 1216, 1246
Bsc4I	CCNNNNNNNGG	4 cut(s)	851, 1058, 1584, 1585
Bse118I	RCCGGY	1 cut(s)	1153
Bse1I	ACTGG	4 cut(s)	861, 1461, 1876, 1890
Bse3DI	GCAATG	1 cut(s)	960
BseAI	TCCGGA	1 cut(s)	1808
BseBI	CCWGG	2 cut(s)	852, 882
BseDI	CCNNGG	4 cut(s)	134, 489, 850, 1306
BseGI	GGATG	2 cut(s)	752, 1438
BseLI	CCNNNNNNNGG	4 cut(s)	851, 1058, 1584, 1585
BseMI	GCAATG	1 cut(s)	960
BseMII	CTCAG	8 cut(s)	80, 207, 334, 783, 1086, 1317, 1775, 1785
BseNI	ACTGG	4 cut(s)	861, 1461, 1876, 1890
BseRI	GAGGAG	2 cut(s)	810, 1406
BseXI	GCAGC	3 cut(s)	112, 1385, 1711
BseYI	CCCAGC	1 cut(s)	210
BsgI	GTGCAG	3 cut(s)	633, 680, 1491
Bsh1236I	CGCG	2 cut(s)	30, 1429
BshFI	GGCC	2 cut(s)	1352, 2068
BshNI	GGYRCC	1 cut(s)	146
BsiHKAI	GWGCWC	3 cut(s)	77, 1695, 1792
BsiHKCI	CYCGRG	2 cut(s)	756, 1605
BsiSI	CCGG	4 cut(s)	1154, 1809, 2000, 2051
BslI	CCNNNNNNNGG	4 cut(s)	851, 1058, 1584, 1585
BsmAI	GTCTC	1 cut(s)	29
BsmI	GAATGC	2 cut(s)	1014, 1579
BsnI	GGCC	2 cut(s)	1352, 2068
BsoBI	CYCGRG	2 cut(s)	756, 1605
Bsp1286I	GDGCHC	3 cut(s)	77, 1695, 1792
Bsp13I	TCCGGA	1 cut(s)	1808
Bsp1407I	TGTACA	1 cut(s)	1648
Bsp143I	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
Bsp1720I	GCTNAGC	3 cut(s)	66, 764, 1720
Bsp19I	CCATGG	1 cut(s)	489
BspACI	CCGC	6 cut(s)	237, 324, 827, 842, 965, 2101
BspANI	GGCC	2 cut(s)	1352, 2068
BspCNI	CTCAG	8 cut(s)	79, 206, 333, 782, 1087, 1318, 1774, 1786
BspEI	TCCGGA	1 cut(s)	1808
BspFNI	CGCG	2 cut(s)	30, 1429
BspHI	TCATGA	2 cut(s)	394, 2176
BspLI	GGNNCC	4 cut(s)	148, 1303, 2055, 2168
BspPI	GGATC	4 cut(s)	236, 591, 1204, 1970
BspQI	GCTCTTC	2 cut(s)	180, 1683
BspT107I	GGYRCC	1 cut(s)	146
BsrDI	GCAATG	1 cut(s)	960
BsrFI	RCCGGY	1 cut(s)	1153
BsrGI	TGTACA	1 cut(s)	1648
BsrI	ACTGG	4 cut(s)	861, 1461, 1876, 1890
BssAI	RCCGGY	1 cut(s)	1153
BssECI	CCNNGG	4 cut(s)	134, 489, 850, 1306
BssMI	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
BssNAI	GTATAC	2 cut(s)	189, 1816
BssT1I	CCWWGG	3 cut(s)	134, 489, 1306
Bst1107I	GTATAC	2 cut(s)	189, 1816
Bst2UI	CCWGG	2 cut(s)	852, 882
Bst4CI	ACNGT	7 cut(s)	203, 389, 940, 1243, 1715, 1822, 1892
Bst6I	CTCTTC	2 cut(s)	180, 1683
BstAUI	TGTACA	1 cut(s)	1648
BstC8I	GCNNGC	3 cut(s)	1523, 1880, 2091
BstDSI	CCRYGG	1 cut(s)	489
BstENI	CCTNNNNNAGG	1 cut(s)	849
BstF5I	GGATG	2 cut(s)	752, 1438
BstFNI	CGCG	2 cut(s)	30, 1429
BstH2I	RGCGCY	1 cut(s)	2096
BstHHI	GCGC	3 cut(s)	16, 1431, 2095
BstKTI	GATC	7 cut(s)	55, 244, 586, 1141, 1199, 1978, 2176
BstMAI	GTCTC	1 cut(s)	29
BstMBI	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
BstMWI	GCNNNNNNNGC	3 cut(s)	293, 1074, 1435
BstNI	CCWGG	2 cut(s)	852, 882
BstNSI	RCATGY	2 cut(s)	1996, 2194
BstPAI	GACNNNNGTC	1 cut(s)	810
BstSCI	CCNGG	2 cut(s)	850, 880
BstSFI	CTRYAG	1 cut(s)	1837
BstUI	CGCG	2 cut(s)	30, 1429
BstV1I	GCAGC	3 cut(s)	112, 1385, 1711
BstV2I	GAAGAC	2 cut(s)	862, 1481
BstX2I	RGATCY	1 cut(s)	583
BstXI	CCANNNNNNTGG	1 cut(s)	743
BstYI	RGATCY	1 cut(s)	583
BstZ17I	GTATAC	2 cut(s)	189, 1816
BsuI	GTATCC	3 cut(s)	329, 744, 2007
BsuRI	GGCC	2 cut(s)	1352, 2068
BtgI	CCRYGG	1 cut(s)	489
BtgZI	GCGATG	1 cut(s)	2017
BtrI	CACGTC	1 cut(s)	890
BtsCI	GGATG	2 cut(s)	752, 1438
BtsI	GCAGTG	4 cut(s)	9, 1045, 1224, 1599
Cac8I	GCNNGC	3 cut(s)	1523, 1880, 2091
CciI	TCATGA	2 cut(s)	394, 2176
CfoI	GCGC	3 cut(s)	16, 1431, 2095
Cfr10I	RCCGGY	1 cut(s)	1153
Cfr13I	GGNCC	4 cut(s)	812, 878, 2098, 2166
CseI	GACGC	2 cut(s)	609, 1475
CsiI	ACCWGGT	1 cut(s)	880
Csp6I	GTAC	4 cut(s)	42, 885, 1618, 1649
CspCI	CAANNNNNGTGG	2 cut(s)	442, 477
CviQI	GTAC	4 cut(s)	42, 885, 1618, 1649
DpnI	GATC	7 cut(s)	54, 243, 585, 1140, 1198, 1977, 2175
DpnII	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	1 cut(s)	1350
Eam1104I	CTCTTC	2 cut(s)	180, 1683
EarI	CTCTTC	2 cut(s)	180, 1683
Ecl136II	GAGCTC	1 cut(s)	1693
Eco130I	CCWWGG	3 cut(s)	134, 489, 1306
Eco24I	GRGCYC	1 cut(s)	1695
Eco32I	GATATC	1 cut(s)	613
Eco47I	GGWCC	4 cut(s)	812, 878, 2098, 2166
Eco47III	AGCGCT	1 cut(s)	2094
Eco53kI	GAGCTC	1 cut(s)	1693
Eco57I	CTGAAG	6 cut(s)	161, 442, 610, 1566, 1626, 2100
Eco88I	CYCGRG	2 cut(s)	756, 1605
EcoICRI	GAGCTC	1 cut(s)	1693
EcoNI	CCTNNNNNAGG	1 cut(s)	849
EcoO109I	RGGNCCY	1 cut(s)	2166
EcoRII	CCWGG	2 cut(s)	850, 880
EcoRV	GATATC	1 cut(s)	613
EcoT14I	CCWWGG	3 cut(s)	134, 489, 1306
EcoT38I	GRGCYC	1 cut(s)	1695
ErhI	CCWWGG	3 cut(s)	134, 489, 1306
FalI	AAGNNNNNCTT	4 cut(s)	1272, 1304, 1290, 1322
FauI	CCCGC	2 cut(s)	849, 958
FbaI	TGATCA	1 cut(s)	2173
FblI	GTMKAC	3 cut(s)	188, 1815, 1836
Fnu4HI	GCNGC	4 cut(s)	126, 238, 1374, 1725
FokI	GGATG	2 cut(s)	759, 1425
FriOI	GRGCYC	1 cut(s)	1695
Fsp4HI	GCNGC	4 cut(s)	126, 238, 1374, 1725
FspBI	CTAG	7 cut(s)	39, 135, 998, 1493, 1859, 1961, 2118
GlaI	GCGC	3 cut(s)	15, 1430, 2094
GluI	GCNGC	4 cut(s)	126, 238, 1374, 1725
GsaI	CCCAGC	1 cut(s)	214
HaeII	RGCGCY	1 cut(s)	2096
HaeIII	GGCC	2 cut(s)	1352, 2068
HapII	CCGG	4 cut(s)	1154, 1809, 2000, 2051
HgaI	GACGC	2 cut(s)	609, 1475
HhaI	GCGC	3 cut(s)	16, 1431, 2095
Hin6I	GCGC	3 cut(s)	14, 1429, 2093
HinP1I	GCGC	3 cut(s)	14, 1429, 2093
HincII	GTYRAC	1 cut(s)	1869
HindII	GTYRAC	1 cut(s)	1869
HinfI	GANTC	7 cut(s)	82, 254, 318, 536, 920, 957, 2147
HpaII	CCGG	4 cut(s)	1154, 1809, 2000, 2051
HphI	GGTGA	5 cut(s)	62, 620, 1209, 1307, 1864
Hpy166II	GTNNAC	8 cut(s)	189, 199, 887, 893, 1318, 1816, 1837, 1869
Hpy188III	TCNNGA	8 cut(s)	309, 395, 876, 1280, 1406, 1793, 1809, 2177
Hpy8I	GTNNAC	8 cut(s)	189, 199, 887, 893, 1318, 1816, 1837, 1869
Hpy99I	CGWCG	1 cut(s)	30
HpyAV	CCTTC	7 cut(s)	272, 634, 1028, 1062, 1292, 1650, 1989
HpyCH4III	ACNGT	7 cut(s)	203, 389, 940, 1243, 1715, 1822, 1892
HpyCH4IV	ACGT	3 cut(s)	578, 889, 2134
HpyF10VI	GCNNNNNNNGC	3 cut(s)	293, 1074, 1435
HpySE526I	ACGT	3 cut(s)	578, 889, 2134
HspAI	GCGC	3 cut(s)	14, 1429, 2093
Kpn2I	TCCGGA	1 cut(s)	1808
Ksp22I	TGATCA	1 cut(s)	2173
Kzo9I	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
LguI	GCTCTTC	2 cut(s)	180, 1683
LmnI	GCTCC	3 cut(s)	823, 1518, 1795
Lsp1109I	GCAGC	3 cut(s)	112, 1385, 1711
LweI	GCATC	6 cut(s)	145, 1089, 1133, 1447, 1845, 1945
MabI	ACCWGGT	1 cut(s)	880
MaeI	CTAG	7 cut(s)	39, 135, 998, 1493, 1859, 1961, 2118
MaeII	ACGT	3 cut(s)	578, 889, 2134
MaeIII	GTNAC	7 cut(s)	79, 268, 380, 863, 1132, 1179, 1450
MalI	GATC	7 cut(s)	54, 243, 585, 1140, 1198, 1977, 2175
MboI	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
MboII	GAAGA	6 cut(s)	167, 867, 937, 1481, 1559, 1700
MfeI	CAATTG	2 cut(s)	671, 2184
MflI	RGATCY	1 cut(s)	583
MhlI	GDGCHC	3 cut(s)	77, 1695, 1792
MlsI	TGGCCA	1 cut(s)	1352
MluCI	AATT	9 cut(s)	220, 368, 466, 502, 523, 671, 1283, 2060, 2184
MluNI	TGGCCA	1 cut(s)	1352
MlyI	GAGTC	4 cut(s)	76, 263, 312, 545
MmeI	TCCRAC	3 cut(s)	372, 561, 1441
Mox20I	TGGCCA	1 cut(s)	1352
MroI	TCCGGA	1 cut(s)	1808
MroXI	GAANNNNTTC	2 cut(s)	455, 599
MscI	TGGCCA	1 cut(s)	1352
MseI	TTAA	2 cut(s)	719, 1356
MslI	CAYNNNNRTG	2 cut(s)	741, 1567
Msp20I	TGGCCA	1 cut(s)	1352
MspA1I	CMGCKG	2 cut(s)	287, 324
MspI	CCGG	4 cut(s)	1154, 1809, 2000, 2051
MspR9I	CCNGG	2 cut(s)	852, 882
MunI	CAATTG	2 cut(s)	671, 2184
Mva1269I	GAATGC	2 cut(s)	1014, 1579
MvaI	CCWGG	2 cut(s)	852, 882
MvnI	CGCG	2 cut(s)	30, 1429
MwoI	GCNNNNNNNGC	3 cut(s)	293, 1074, 1435
NcoI	CCATGG	1 cut(s)	489
NdeII	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
NlaIV	GGNNCC	4 cut(s)	148, 1303, 2055, 2168
NmuCI	GTSAC	3 cut(s)	79, 380, 863
NspI	RCATGY	2 cut(s)	1996, 2194
PaeR7I	CTCGAG	1 cut(s)	1605
PagI	TCATGA	2 cut(s)	394, 2176
PciI	ACATGT	1 cut(s)	2190
PciSI	GCTCTTC	2 cut(s)	180, 1683
PcsI	WCGNNNNNNNCGW	1 cut(s)	1318
PctI	GAATGC	2 cut(s)	1014, 1579
PdmI	GAANNNNTTC	2 cut(s)	455, 599
PfeI	GAWTC	3 cut(s)	920, 957, 2147
PflFI	GACNNNGTC	2 cut(s)	861, 1485
PkrI	GCNGC	4 cut(s)	127, 239, 1375, 1726
PleI	GAGTC	4 cut(s)	76, 262, 312, 544
PpsI	GAGTC	4 cut(s)	76, 262, 312, 544
PpuMI	RGGWCCY	1 cut(s)	2166
PscI	ACATGT	1 cut(s)	2190
PshAI	GACNNNNGTC	1 cut(s)	810
Psp124BI	GAGCTC	1 cut(s)	1695
Psp1406I	AACGTT	1 cut(s)	578
Psp5II	RGGWCCY	1 cut(s)	2166
Psp6I	CCWGG	2 cut(s)	850, 880
PspFI	CCCAGC	1 cut(s)	210
PspGI	CCWGG	2 cut(s)	850, 880
PspN4I	GGNNCC	4 cut(s)	148, 1303, 2055, 2168
PspPI	GGNCC	4 cut(s)	812, 878, 2098, 2166
PspPPI	RGGWCCY	1 cut(s)	2166
PspXI	VCTCGAGB	1 cut(s)	1605
PsuI	RGATCY	1 cut(s)	583
PsyI	GACNNNGTC	2 cut(s)	861, 1485
PvuII	CAGCTG	1 cut(s)	287
RsaI	GTAC	4 cut(s)	43, 886, 1619, 1650
RsaNI	GTAC	4 cut(s)	42, 885, 1618, 1649
RseI	CAYNNNNRTG	2 cut(s)	741, 1567
SacI	GAGCTC	1 cut(s)	1695
SapI	GCTCTTC	2 cut(s)	180, 1683
SaqAI	TTAA	2 cut(s)	719, 1356
SatI	GCNGC	4 cut(s)	126, 238, 1374, 1725
Sau3AI	GATC	7 cut(s)	52, 241, 583, 1138, 1196, 1975, 2173
Sau96I	GGNCC	4 cut(s)	812, 878, 2098, 2166
ScaI	AGTACT	1 cut(s)	1619
SchI	GAGTC	4 cut(s)	76, 263, 312, 545
ScrFI	CCNGG	2 cut(s)	852, 882
SduI	GDGCHC	3 cut(s)	77, 1695, 1792
SexAI	ACCWGGT	1 cut(s)	880
SfaNI	GCATC	6 cut(s)	145, 1089, 1133, 1447, 1845, 1945
SfcI	CTRYAG	1 cut(s)	1837
Sfr274I	CTCGAG	1 cut(s)	1605
SinI	GGWCC	4 cut(s)	812, 878, 2098, 2166
SlaI	CTCGAG	1 cut(s)	1605
SmiMI	CAYNNNNRTG	2 cut(s)	741, 1567
SmlI	CTYRAG	3 cut(s)	1142, 1432, 1605
SmoI	CTYRAG	3 cut(s)	1142, 1432, 1605
SpeI	ACTAGT	1 cut(s)	38
Sse9I	AATT	9 cut(s)	220, 368, 466, 502, 523, 671, 1283, 2060, 2184
SsiI	CCGC	6 cut(s)	237, 324, 827, 842, 965, 2101
SspI	AATATT	2 cut(s)	1164, 1675
SspMI	CTAG	7 cut(s)	39, 135, 998, 1493, 1859, 1961, 2118
SstI	GAGCTC	1 cut(s)	1695
StyD4I	CCNGG	2 cut(s)	850, 880
StyI	CCWWGG	3 cut(s)	134, 489, 1306
TaaI	ACNGT	7 cut(s)	203, 389, 940, 1243, 1715, 1822, 1892
TaiI	ACGT	3 cut(s)	581, 892, 2137
TaqI	TCGA	4 cut(s)	923, 1055, 1365, 1606
TasI	AATT	9 cut(s)	220, 368, 466, 502, 523, 671, 1283, 2060, 2184
TatI	WGTACW	3 cut(s)	41, 1617, 1648
TauI	GCSGC	1 cut(s)	240
TfiI	GAWTC	3 cut(s)	920, 957, 2147
Tru1I	TTAA	2 cut(s)	719, 1356
Tru9I	TTAA	2 cut(s)	719, 1356
TseFI	GTSAC	3 cut(s)	79, 380, 863
TseI	GCWGC	3 cut(s)	125, 1373, 1724
Tsp45I	GTSAC	3 cut(s)	79, 380, 863
TspDTI	ATGAA	7 cut(s)	383, 621, 764, 1526, 1701, 2160, 2193
Tth111I	GACNNNGTC	2 cut(s)	861, 1485
VpaK11BI	GGWCC	4 cut(s)	812, 878, 2098, 2166
XagI	CCTNNNNNAGG	1 cut(s)	849
XapI	RAATTY	4 cut(s)	368, 466, 1283, 2060
XceI	RCATGY	2 cut(s)	1996, 2194
XcmI	CCANNNNNNNNNTGG	1 cut(s)	487
XhoI	CTCGAG	1 cut(s)	1605
XmaJI	CCTAGG	1 cut(s)	134
XmiI	GTMKAC	3 cut(s)	188, 1815, 1836
XmnI	GAANNNNTTC	2 cut(s)	455, 599
XspI	CTAG	7 cut(s)	39, 135, 998, 1493, 1859, 1961, 2118
ZrmI	AGTACT	1 cut(s)	1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.