No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G22370 AT4G22370 AT4G22370 |
| fragaria_vesca | FvH4_3g00940 FvH4_3g00940 |
| malus_domestica | MD10G1332100.v1.1 |
| prunus_persica | Prupe.4G010000_v2.0.a1 Prupe.4G010000_v2.0.a1 |
| pyrus_communis | pycom10g28150 |
| rosa_chinensis | RchiOBHm_Chr5g0001461 |
| rosa_laevigata | RLG00000030930 |
| rosa_multiflora | Rmu_sc0003749.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00074930 |
| rosa_rugosa | Rorug04G0390400 |
| rosa_samantha | Rh5AG011300 Rh5BG013800 Rh5CG012300 Rh5DG011500 |
| rosa_wichuraiana | Rw5G001070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 458 |
| AccB1I | GGYRCC | 1 cut(s) | 196 |
| AciI | CCGC | 1 cut(s) | 237 |
| AclWI | GGATC | 2 cut(s) | 248, 261 |
| AcsI | RAATTY | 2 cut(s) | 60, 97 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 152, 386, 571 |
| AflIII | ACRYGT | 1 cut(s) | 67 |
| AgsI | TTSAA | 1 cut(s) | 170 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 150, 182 |
| AluBI | AGCT | 4 cut(s) | 116, 263, 319, 549 |
| AluI | AGCT | 4 cut(s) | 116, 263, 319, 549 |
| Alw21I | GWGCWC | 1 cut(s) | 265 |
| AlwI | GGATC | 2 cut(s) | 248, 261 |
| Ama87I | CYCGRG | 1 cut(s) | 314 |
| AoxI | GGCC | 1 cut(s) | 154 |
| ApoI | RAATTY | 2 cut(s) | 60, 97 |
| AspA2I | CCTAGG | 1 cut(s) | 433 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 2 cut(s) | 213, 592 |
| AvaI | CYCGRG | 1 cut(s) | 314 |
| AvrII | CCTAGG | 1 cut(s) | 433 |
| BamHI | GGATCC | 1 cut(s) | 253 |
| BanI | GGYRCC | 1 cut(s) | 196 |
| BanII | GRGCYC | 1 cut(s) | 265 |
| BauI | CACGAG | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 265 |
| BccI | CCATC | 3 cut(s) | 95, 187, 470 |
| BfaI | CTAG | 1 cut(s) | 434 |
| BlnI | CCTAGG | 1 cut(s) | 433 |
| BmeT110I | CYCGRG | 1 cut(s) | 314 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmiI | GGNNCC | 2 cut(s) | 198, 255 |
| BsaJI | CCNNGG | 1 cut(s) | 433 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 152, 386, 571 |
| BseDI | CCNNGG | 1 cut(s) | 433 |
| BseGI | GGATG | 4 cut(s) | 87, 139, 372, 486 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 152, 386, 571 |
| BsgI | GTGCAG | 2 cut(s) | 252, 372 |
| BshFI | GGCC | 1 cut(s) | 156 |
| BshNI | GGYRCC | 1 cut(s) | 196 |
| BsiHKAI | GWGCWC | 1 cut(s) | 265 |
| BsiHKCI | CYCGRG | 1 cut(s) | 314 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 152, 386, 571 |
| BsnI | GGCC | 1 cut(s) | 156 |
| BsoBI | CYCGRG | 1 cut(s) | 314 |
| Bsp1286I | GDGCHC | 1 cut(s) | 265 |
| Bsp143I | GATC | 2 cut(s) | 244, 253 |
| BspACI | CCGC | 1 cut(s) | 237 |
| BspANI | GGCC | 1 cut(s) | 156 |
| BspHI | TCATGA | 1 cut(s) | 472 |
| BspLI | GGNNCC | 2 cut(s) | 198, 255 |
| BspPI | GGATC | 2 cut(s) | 248, 261 |
| BspT107I | GGYRCC | 1 cut(s) | 196 |
| BssECI | CCNNGG | 1 cut(s) | 433 |
| BssMI | GATC | 2 cut(s) | 244, 253 |
| BssSI | CACGAG | 1 cut(s) | 258 |
| BssT1I | CCWWGG | 1 cut(s) | 433 |
| Bst2BI | CACGAG | 1 cut(s) | 258 |
| BstC8I | GCNNGC | 2 cut(s) | 235, 355 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstF5I | GGATG | 4 cut(s) | 87, 139, 372, 486 |
| BstKTI | GATC | 2 cut(s) | 247, 256 |
| BstMBI | GATC | 2 cut(s) | 244, 253 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstNSI | RCATGY | 1 cut(s) | 71 |
| BstX2I | RGATCY | 1 cut(s) | 253 |
| BstYI | RGATCY | 1 cut(s) | 253 |
| BsuRI | GGCC | 1 cut(s) | 156 |
| BtsCI | GGATG | 4 cut(s) | 87, 139, 372, 486 |
| Cac8I | GCNNGC | 2 cut(s) | 235, 355 |
| CciI | TCATGA | 1 cut(s) | 472 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| CviAII | CATG | 4 cut(s) | 55, 68, 295, 473 |
| CviJI | RGCY | 8 cut(s) | 5, 116, 156, 263, 293, 319, 503, 549 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 116, 156, 263, 293, 319, 503, 549 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 2 cut(s) | 246, 255 |
| DpnII | GATC | 2 cut(s) | 244, 253 |
| EciI | GGCGGA | 1 cut(s) | 252 |
| Ecl136II | GAGCTC | 1 cut(s) | 263 |
| Eco130I | CCWWGG | 1 cut(s) | 433 |
| Eco24I | GRGCYC | 1 cut(s) | 265 |
| Eco53kI | GAGCTC | 1 cut(s) | 263 |
| Eco88I | CYCGRG | 1 cut(s) | 314 |
| EcoICRI | GAGCTC | 1 cut(s) | 263 |
| EcoT14I | CCWWGG | 1 cut(s) | 433 |
| EcoT38I | GRGCYC | 1 cut(s) | 265 |
| ErhI | CCWWGG | 1 cut(s) | 433 |
| FaeI | CATG | 4 cut(s) | 58, 71, 298, 476 |
| FatI | CATG | 4 cut(s) | 54, 67, 294, 472 |
| FokI | GGATG | 4 cut(s) | 74, 126, 359, 493 |
| FriOI | GRGCYC | 1 cut(s) | 265 |
| FspBI | CTAG | 1 cut(s) | 434 |
| HaeIII | GGCC | 1 cut(s) | 156 |
| Hin1II | CATG | 4 cut(s) | 58, 71, 298, 476 |
| HinfI | GANTC | 1 cut(s) | 166 |
| HphI | GGTGA | 2 cut(s) | 213, 592 |
| Hpy188I | TCNGA | 2 cut(s) | 325, 428 |
| Hpy188III | TCNNGA | 3 cut(s) | 266, 314, 473 |
| HpyAV | CCTTC | 5 cut(s) | 25, 168, 221, 392, 571 |
| HpyCH4V | TGCA | 3 cut(s) | 58, 233, 353 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 4 cut(s) | 58, 71, 298, 476 |
| Kzo9I | GATC | 2 cut(s) | 244, 253 |
| LmnI | GCTCC | 1 cut(s) | 513 |
| LpnPI | CCDG | 6 cut(s) | 31, 90, 219, 236, 237, 339 |
| MaeI | CTAG | 1 cut(s) | 434 |
| MalI | GATC | 2 cut(s) | 246, 255 |
| MboI | GATC | 2 cut(s) | 244, 253 |
| MboII | GAAGA | 2 cut(s) | 254, 310 |
| MflI | RGATCY | 1 cut(s) | 253 |
| MhlI | GDGCHC | 1 cut(s) | 265 |
| MluCI | AATT | 5 cut(s) | 60, 97, 108, 133, 444 |
| MmeI | TCCRAC | 2 cut(s) | 400, 451 |
| MnlI | CCTC | 3 cut(s) | 319, 376, 380 |
| MseI | TTAA | 2 cut(s) | 72, 588 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 2 cut(s) | 244, 253 |
| NlaIII | CATG | 4 cut(s) | 58, 71, 298, 476 |
| NlaIV | GGNNCC | 2 cut(s) | 198, 255 |
| NspI | RCATGY | 1 cut(s) | 71 |
| PaeR7I | CTCGAG | 1 cut(s) | 314 |
| PagI | TCATGA | 1 cut(s) | 472 |
| PciI | ACATGT | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 166 |
| PscI | ACATGT | 1 cut(s) | 67 |
| PsiI | TTATAA | 1 cut(s) | 458 |
| Psp124BI | GAGCTC | 1 cut(s) | 265 |
| PspN4I | GGNNCC | 2 cut(s) | 198, 255 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| PsuI | RGATCY | 1 cut(s) | 253 |
| SacI | GAGCTC | 1 cut(s) | 265 |
| SaqAI | TTAA | 2 cut(s) | 72, 588 |
| Sau3AI | GATC | 2 cut(s) | 244, 253 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| SduI | GDGCHC | 1 cut(s) | 265 |
| SetI | ASST | 9 cut(s) | 118, 163, 232, 265, 321, 330, 435, 551, 582 |
| Sfr274I | CTCGAG | 1 cut(s) | 314 |
| SlaI | CTCGAG | 1 cut(s) | 314 |
| SmlI | CTYRAG | 1 cut(s) | 314 |
| SmoI | CTYRAG | 1 cut(s) | 314 |
| Sse9I | AATT | 5 cut(s) | 60, 97, 108, 133, 444 |
| SsiI | CCGC | 1 cut(s) | 237 |
| SspMI | CTAG | 1 cut(s) | 434 |
| SstI | GAGCTC | 1 cut(s) | 265 |
| StyI | CCWWGG | 1 cut(s) | 433 |
| TaqI | TCGA | 3 cut(s) | 267, 315, 385 |
| TasI | AATT | 5 cut(s) | 60, 97, 108, 133, 444 |
| TfiI | GAWTC | 1 cut(s) | 166 |
| Tru1I | TTAA | 2 cut(s) | 72, 588 |
| Tru9I | TTAA | 2 cut(s) | 72, 588 |
| TspDTI | ATGAA | 5 cut(s) | 128, 311, 354, 461, 497 |
| XapI | RAATTY | 2 cut(s) | 60, 97 |
| XceI | RCATGY | 1 cut(s) | 71 |
| XhoI | CTCGAG | 1 cut(s) | 314 |
| XmaJI | CCTAGG | 1 cut(s) | 433 |
| XspI | CTAG | 1 cut(s) | 434 |