Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010533

Physical Location & Seq

Genomic Coordinates Forward (+)

96505770 .. 96508515

Gene Structure 2746 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00075980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGGAGGAGGAGGAGGACTGCGAAAAGCGGCCAAGAAGATGGTGGTGGCAGCTGCCAATGCATGTGGTGGTTCCTTCTCTTCCAGGAGGAAGCCTCTTGTGGACCCCATCGTCTTCTTCGATCATACCACCGCCACTGCCTCTATCTCAGGTTCTTCGGCTGTGTCTCCCACCAACTCCACAGCAGCAGAAGAAGAAGAAGAAGAAGAAGAATGCATTGCAAAGGAGACAGAATCTGCAATCACCAATTCTAACAATGTACCTTCTTCTTCTTCTAATAAGAACTTGTGCGCAATATGTCTAGACCCTCTGAGTTACCATAGCAAGGGACGGATCTCAGGGCAGGCTATATTCACGGCCCAGTGCTCCCATGCATTCCACTTTGCCTGCATCTCTTCCAATGTCCGCCATGGTAGTGTCACCTGCCCCATCTGCCGTGCCCATTGGACTCAGCTGCCCCGCAATCTGAACCCACCTGGTGGTTCCCTTTCCTCTTGCAACCCAACTGATCCCATCCTCCAAATCCTTGATGACTCTATAGCCACTTTCCGCATCCACAGGCGCTCTTTCCTGCGCTCTGCTCGCTATGATGATGATGACCCAATTGAGCCTCCCGATCACATGCCTAATTTCCCCCGTCTCCAATTCTCTCTAACACCCTTACCACCTAGTACTCCACCCCATAGCTTTCAACCGTCCTGGTGCACCACACACCCATATCATCCAACCCCACATCACCTGAGCTATAGCTCCACATCATTGTTACAATCGCCAACCAGGCCAAAGCCCTATACTACTACTATGTATGCCTCTTCGGACAGAGCTTATCTTTCGGTGAAATTGGCAGAGCAGCGAGCAACTGATTTTGTCTTGGTTGCTAGTCCCAACGGACCACACTTGAGGCTTCTCAAGCAGTGCATGGCATTGGTGGTTTTCTCCCTTAGACCTATTGATCGTTTGGCCATTGTTACCTACTCATCAGCTGCTGCGCGTGTCTTCCCTCTAAGACGCATGACATCTTATGGGAAGCGAACAGCCCAGCAGGTTATTGACCGCCTGTTCTACATGGGGCAAGCAGATCCAGTGGAAGGGCTCAAGAAAGGGATCAAGATACTTCAAGAACGTGTATACAAGAATCAAAATTCGGGTATCCTGCATCTTTCTGACACCCCAACTCGATCCTACCATGCTGCTCTCAATATGGACCTGCCCATTCCAGTGCATCGTTTTCATGTAGGATTTGGATTTGGCACTTCAAATGGTTTTATCATGCATGAATTTGAAGAGTTCCTCAGAAGACTCATAGGTGGTGTTGTTAGAGAAATCCAGTTAAGGATCAGCACAACGGAGGAAGCCAGCAGTAGGATTGTAAGAATAGGAGAGCTAAGAAACGGAGAAGAAAGGAAAATCTTAGTGGACTTGAGTGTTTGTGGACATATTTGTGTGGGATACAGCTACATAGAGGATGGTGAGATTGACGAACCTATCACAACAGGGGAAACTATGGTGAGCATAGGAGATGGTAAAAGTAATATTAGTGCAGCTGAAGCAGCTTCTGCTGGGTCAGGGACGAGCGGTCCAATTATTGGTGGGAGGCCTAGTAGTGCAGACAGTTGGGACTACCATGATCCTTACATGGCTAGAAGATGGGCCAAACATTTGCATGGCTACCGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_2 zf-C3HC4 zf-RING_2 zf-rbx1

Protein Analysis

559

Amino Acids

61.31

Weight (kDa)

8.35

Isoelectric Point (pI)

58.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	96 - 146	2.1e-07	Ring finger domain
zf-rbx1	PF12678	96 - 146	1.3e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	97 - 145	1.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	97 - 131	1.8e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010533)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00090 FvH4_3g00090
malus_domestica	MD05G1364100.v1.1
prunus_persica	Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1
pyrus_communis	pycom05g33030
rosa_chinensis	RchiOBHm_Chr5g0000121
rosa_laevigata	RLG00000030843
rosa_multiflora	Rmu_sc0003125.1_g000002 Rmu_ssc0000243.1_g000019
rosa_roxburghii	Rroxscaffold_1G00075980
rosa_rugosa	Rorug04G0381700
rosa_samantha	Rh5AG000800 Rh5BG002000 Rh5CG000900 Rh5DG000800
rosa_wichuraiana	Rw5G000110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	431
AasI	GACNNNNNNGTC	1 cut(s)	110
Acc16I	TGCGCA	1 cut(s)	292
Acc36I	ACCTGC	3 cut(s)	431, 1033, 1215
AccB7I	CCANNNNNTGG	2 cut(s)	479, 1586
AccBSI	CCGCTC	1 cut(s)	1575
AccI	GTMKAC	1 cut(s)	1128
AccII	CGCG	1 cut(s)	991
AciI	CCGC	7 cut(s)	29, 132, 406, 460, 550, 1054, 1575
AclWI	GGATC	7 cut(s)	341, 503, 1073, 1112, 1173, 1343, 1622
AcoI	YGGCCR	2 cut(s)	30, 960
AcsI	RAATTY	2 cut(s)	1141, 1277
AcuI	CTGAAG	1 cut(s)	1566
AdeI	CACNNNGTG	1 cut(s)	479
AfaI	GTAC	2 cut(s)	261, 673
AfiI	CCNNNNNNNGG	5 cut(s)	325, 479, 1088, 1362, 1586
AflIII	ACRYGT	1 cut(s)	1123
AgsI	TTSAA	4 cut(s)	692, 1118, 1257, 1283
AhdI	GACNNNNNGTC	1 cut(s)	1575
AjnI	CCWGG	4 cut(s)	83, 475, 698, 776
Alw21I	GWGCWC	2 cut(s)	368, 707
Alw26I	GTCTC	3 cut(s)	171, 221, 644
Alw44I	GTGCAC	1 cut(s)	703
AlwI	GGATC	7 cut(s)	341, 503, 1073, 1112, 1173, 1343, 1622
AlwNI	CAGNNNCTG	3 cut(s)	236, 986, 1556
AoxI	GGCC	6 cut(s)	30, 357, 779, 960, 1595, 1650
ApaLI	GTGCAC	1 cut(s)	703
ApoI	RAATTY	2 cut(s)	1141, 1277
AspLEI	GCGC	4 cut(s)	293, 564, 576, 991
AspS9I	GGNCC	6 cut(s)	103, 358, 890, 1204, 1577, 1650
AsuHPI	GGTGA	6 cut(s)	235, 412, 728, 847, 1481, 1519
AvaII	GGWCC	4 cut(s)	103, 890, 1204, 1577
BaeGI	GKGCMC	2 cut(s)	442, 707
BalI	TGGCCA	1 cut(s)	962
BanII	GRGCYC	1 cut(s)	1095
BbsI	GAAGAC	3 cut(s)	106, 988, 1303
Bbv12I	GWGCWC	2 cut(s)	368, 707
BccI	CCATC	7 cut(s)	34, 116, 437, 521, 1460, 1514, 1641
BceAI	ACGGC	2 cut(s)	372, 420
BciT130I	CCWGG	4 cut(s)	85, 477, 700, 778
BciVI	GTATCC	2 cut(s)	1160, 1442
BcoDI	GTCTC	3 cut(s)	171, 221, 644
BfaI	CTAG	5 cut(s)	302, 669, 879, 1599, 1641
BfmI	CTRYAG	2 cut(s)	537, 745
BfoI	RGCGCY	1 cut(s)	565
BfuAI	ACCTGC	3 cut(s)	431, 1033, 1215
BfuI	GTATCC	2 cut(s)	1160, 1442
BglI	GCCNNNNNGGC	1 cut(s)	778
BmcAI	AGTACT	1 cut(s)	673
Bme1390I	CCNGG	4 cut(s)	85, 477, 700, 778
Bme18I	GGWCC	4 cut(s)	103, 890, 1204, 1577
BmeRI	GACNNNNNGTC	1 cut(s)	1575
BmgT120I	GGNCC	6 cut(s)	103, 358, 890, 1204, 1577, 1650
BmiI	GGNNCC	3 cut(s)	73, 105, 484
BmrFI	CCNGG	4 cut(s)	85, 477, 700, 778
BmrI	ACTGGG	1 cut(s)	355
BmsI	GCATC	4 cut(s)	399, 561, 1165, 1231
BmuI	ACTGGG	1 cut(s)	355
BpiI	GAAGAC	3 cut(s)	106, 988, 1303
BplI	GAGNNNNNCTC	2 cut(s)	79, 111
Bpu10I	CCTNAGC	1 cut(s)	740
BpuEI	CTTGAG	4 cut(s)	893, 919, 1079, 1441
BsaJI	CCNNGG	1 cut(s)	409
BsaXI	ACNNNNNCTCC	2 cut(s)	1585, 1615
Bsc4I	CCNNNNNNNGG	5 cut(s)	325, 479, 1088, 1362, 1586
Bse118I	RCCGGY	1 cut(s)	1671
Bse1I	ACTGG	4 cut(s)	361, 1082, 1217, 1327
Bse3DI	GCAATG	1 cut(s)	216
BseBI	CCWGG	4 cut(s)	85, 477, 700, 778
BseDI	CCNNGG	1 cut(s)	409
BseGI	GGATG	4 cut(s)	513, 552, 721, 1471
BseLI	CCNNNNNNNGG	5 cut(s)	325, 479, 1088, 1362, 1586
BseMI	GCAATG	1 cut(s)	216
BseMII	CTCAG	6 cut(s)	162, 302, 351, 464, 731, 1306
BseNI	ACTGG	4 cut(s)	361, 1082, 1217, 1327
BseRI	GAGGAG	3 cut(s)	21, 24, 27
BseSI	GKGCMC	2 cut(s)	442, 707
BseYI	CCCAGC	2 cut(s)	1038, 1559
BsgI	GTGCAG	2 cut(s)	1560, 1626
Bsh1236I	CGCG	1 cut(s)	991
BshFI	GGCC	6 cut(s)	32, 359, 781, 962, 1597, 1652
BsiHKAI	GWGCWC	2 cut(s)	368, 707
BsiSI	CCGG	1 cut(s)	1672
BslFI	GGGAC	4 cut(s)	342, 867, 1582, 1631
BslI	CCNNNNNNNGG	5 cut(s)	325, 479, 1088, 1362, 1586
BsmAI	GTCTC	3 cut(s)	171, 221, 644
BsmBI	CGTCTC	1 cut(s)	644
BsmFI	GGGAC	4 cut(s)	342, 867, 1582, 1631
BsmI	GAATGC	2 cut(s)	218, 374
BsnI	GGCC	6 cut(s)	32, 359, 781, 962, 1597, 1652
Bsp1286I	GDGCHC	4 cut(s)	368, 442, 707, 1095
Bsp19I	CCATGG	1 cut(s)	409
BspACI	CCGC	7 cut(s)	29, 132, 406, 460, 550, 1054, 1575
BspANI	GGCC	6 cut(s)	32, 359, 781, 962, 1597, 1652
BspCNI	CTCAG	6 cut(s)	161, 303, 350, 463, 732, 1305
BspFNI	CGCG	1 cut(s)	991
BspLI	GGNNCC	3 cut(s)	73, 105, 484
BspMI	ACCTGC	3 cut(s)	431, 1033, 1215
BspPI	GGATC	7 cut(s)	341, 503, 1073, 1112, 1173, 1343, 1622
BsrBI	CCGCTC	1 cut(s)	1575
BsrDI	GCAATG	1 cut(s)	216
BsrFI	RCCGGY	1 cut(s)	1671
BsrI	ACTGG	4 cut(s)	361, 1082, 1217, 1327
BssAI	RCCGGY	1 cut(s)	1671
BssECI	CCNNGG	1 cut(s)	409
BssNAI	GTATAC	1 cut(s)	1129
BssT1I	CCWWGG	1 cut(s)	409
Bst1107I	GTATAC	1 cut(s)	1129
Bst2UI	CCWGG	4 cut(s)	85, 477, 700, 778
Bst4CI	ACNGT	2 cut(s)	696, 1613
Bst6I	CTCTTC	4 cut(s)	85, 400, 817, 1278
BstAPI	GCANNNNNTGC	1 cut(s)	1556
BstC8I	GCNNGC	6 cut(s)	345, 388, 583, 855, 1074, 1357
BstDSI	CCRYGG	1 cut(s)	409
BstF5I	GGATG	4 cut(s)	513, 552, 721, 1471
BstFNI	CGCG	1 cut(s)	991
BstH2I	RGCGCY	1 cut(s)	565
BstHHI	GCGC	4 cut(s)	293, 564, 576, 991
BstMAI	GTCTC	3 cut(s)	171, 221, 644
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 432, 582, 778, 910, 1547, 1550, 1556
BstNI	CCWGG	4 cut(s)	85, 477, 700, 778
BstNSI	RCATGY	2 cut(s)	66, 625
BstSCI	CCNGG	4 cut(s)	83, 475, 698, 776
BstSFI	CTRYAG	2 cut(s)	537, 745
BstSLI	GKGCMC	2 cut(s)	442, 707
BstUI	CGCG	1 cut(s)	991
BstV2I	GAAGAC	3 cut(s)	106, 988, 1303
BstX2I	RGATCY	2 cut(s)	333, 1078
BstXI	CCANNNNNNTGG	1 cut(s)	40
BstYI	RGATCY	2 cut(s)	333, 1078
BstZ17I	GTATAC	1 cut(s)	1129
BsuI	GTATCC	2 cut(s)	1160, 1442
BsuRI	GGCC	6 cut(s)	32, 359, 781, 962, 1597, 1652
BtgI	CCRYGG	1 cut(s)	409
BtsCI	GGATG	4 cut(s)	513, 552, 721, 1471
BtsI	GCAGTG	2 cut(s)	135, 920
BtsIMutI	CAGTG	5 cut(s)	135, 368, 920, 1089, 1224
BveI	ACCTGC	3 cut(s)	431, 1033, 1215
Cac8I	GCNNGC	6 cut(s)	345, 388, 583, 855, 1074, 1357
CaiI	CAGNNNCTG	3 cut(s)	236, 986, 1556
CfoI	GCGC	4 cut(s)	293, 564, 576, 991
Cfr10I	RCCGGY	1 cut(s)	1671
Cfr13I	GGNCC	6 cut(s)	103, 358, 890, 1204, 1577, 1650
CseI	GACGC	1 cut(s)	1017
CsiI	ACCWGGT	1 cut(s)	475
Csp6I	GTAC	2 cut(s)	260, 672
CspCI	CAANNNNNGTGG	2 cut(s)	46, 81
CviQI	GTAC	2 cut(s)	260, 672
DraIII	CACNNNGTG	1 cut(s)	479
DrdI	GACNNNNNNGTC	1 cut(s)	110
DriI	GACNNNNNGTC	1 cut(s)	1575
DseDI	GACNNNNNNGTC	1 cut(s)	110
EaeI	YGGCCR	2 cut(s)	30, 960
Eam1104I	CTCTTC	4 cut(s)	85, 400, 817, 1278
Eam1105I	GACNNNNNGTC	1 cut(s)	1575
EarI	CTCTTC	4 cut(s)	85, 400, 817, 1278
EciI	GGCGGA	1 cut(s)	395
Eco130I	CCWWGG	1 cut(s)	409
Eco147I	AGGCCT	1 cut(s)	1597
Eco24I	GRGCYC	1 cut(s)	1095
Eco47I	GGWCC	4 cut(s)	103, 890, 1204, 1577
Eco57I	CTGAAG	1 cut(s)	1566
EcoRII	CCWGG	4 cut(s)	83, 475, 698, 776
EcoT14I	CCWWGG	1 cut(s)	409
EcoT22I	ATGCAT	4 cut(s)	64, 218, 376, 1275
EcoT38I	GRGCYC	1 cut(s)	1095
ErhI	CCWWGG	1 cut(s)	409
Esp3I	CGTCTC	1 cut(s)	644
FaqI	GGGAC	4 cut(s)	342, 867, 1582, 1631
FauI	CCCGC	1 cut(s)	467
FblI	GTMKAC	1 cut(s)	1128
FokI	GGATG	4 cut(s)	500, 539, 708, 1478
FriOI	GRGCYC	1 cut(s)	1095
FspBI	CTAG	5 cut(s)	302, 669, 879, 1599, 1641
FspI	TGCGCA	1 cut(s)	292
GlaI	GCGC	4 cut(s)	292, 563, 575, 990
GsaI	CCCAGC	2 cut(s)	1042, 1563
HaeII	RGCGCY	1 cut(s)	565
HaeIII	GGCC	6 cut(s)	32, 359, 781, 962, 1597, 1652
HapII	CCGG	1 cut(s)	1672
HgaI	GACGC	1 cut(s)	1017
HhaI	GCGC	4 cut(s)	293, 564, 576, 991
Hin6I	GCGC	4 cut(s)	291, 562, 574, 989
HinP1I	GCGC	4 cut(s)	291, 562, 574, 989
HinfI	GANTC	5 cut(s)	233, 448, 533, 1135, 1299
HpaII	CCGG	1 cut(s)	1672
HphI	GGTGA	6 cut(s)	235, 412, 728, 847, 1481, 1519
Hpy166II	GTNNAC	5 cut(s)	103, 705, 1129, 1417, 1433
Hpy188I	TCNGA	5 cut(s)	312, 468, 817, 1165, 1295
Hpy188III	TCNNGA	5 cut(s)	302, 614, 1096, 1108, 1118
Hpy8I	GTNNAC	5 cut(s)	103, 705, 1129, 1417, 1433
HpyAV	CCTTC	3 cut(s)	85, 273, 1082
HpyCH4III	ACNGT	2 cut(s)	696, 1613
HpyCH4IV	ACGT	1 cut(s)	1123
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 432, 582, 778, 910, 1547, 1550, 1556
HpySE526I	ACGT	1 cut(s)	1123
HspAI	GCGC	4 cut(s)	291, 562, 574, 989
LmnI	GCTCC	2 cut(s)	371, 755
LweI	GCATC	4 cut(s)	399, 561, 1165, 1231
MabI	ACCWGGT	1 cut(s)	475
MaeI	CTAG	5 cut(s)	302, 669, 879, 1599, 1641
MaeII	ACGT	1 cut(s)	1123
MaeIII	GTNAC	4 cut(s)	314, 418, 762, 967
MbiI	CCGCTC	1 cut(s)	1575
MfeI	CAATTG	1 cut(s)	603
MflI	RGATCY	2 cut(s)	333, 1078
MhlI	GDGCHC	4 cut(s)	368, 442, 707, 1095
MlsI	TGGCCA	1 cut(s)	962
MluCI	AATT	8 cut(s)	247, 603, 628, 644, 839, 1141, 1277, 1581
MluNI	TGGCCA	1 cut(s)	962
MlyI	GAGTC	3 cut(s)	442, 527, 1293
MmeI	TCCRAC	1 cut(s)	749
Mox20I	TGGCCA	1 cut(s)	962
Mph1103I	ATGCAT	4 cut(s)	64, 218, 376, 1275
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	1 cut(s)	1331
MslI	CAYNNNNRTG	4 cut(s)	414, 1217, 1440, 1662
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	4 cut(s)	53, 454, 983, 1544
MspI	CCGG	1 cut(s)	1672
MspR9I	CCNGG	4 cut(s)	85, 477, 700, 778
MunI	CAATTG	1 cut(s)	603
Mva1269I	GAATGC	2 cut(s)	218, 374
MvaI	CCWGG	4 cut(s)	85, 477, 700, 778
MvnI	CGCG	1 cut(s)	991
MwoI	GCNNNNNNNGC	8 cut(s)	59, 432, 582, 778, 910, 1547, 1550, 1556
NcoI	CCATGG	1 cut(s)	409
NlaIV	GGNNCC	3 cut(s)	73, 105, 484
NmuCI	GTSAC	1 cut(s)	418
NsbI	TGCGCA	1 cut(s)	292
NsiI	ATGCAT	4 cut(s)	64, 218, 376, 1275
NspI	RCATGY	2 cut(s)	66, 625
PaqCI	CACCTGC	1 cut(s)	431
PceI	AGGCCT	1 cut(s)	1597
PcsI	WCGNNNNNNNCGW	1 cut(s)	117
PctI	GAATGC	2 cut(s)	218, 374
PfeI	GAWTC	2 cut(s)	233, 1135
PflMI	CCANNNNNTGG	2 cut(s)	479, 1586
PfoI	TCCNGGA	1 cut(s)	83
PleI	GAGTC	3 cut(s)	442, 527, 1293
PpsI	GAGTC	3 cut(s)	442, 527, 1293
Psp6I	CCWGG	4 cut(s)	83, 475, 698, 776
PspFI	CCCAGC	2 cut(s)	1038, 1559
PspGI	CCWGG	4 cut(s)	83, 475, 698, 776
PspN4I	GGNNCC	3 cut(s)	73, 105, 484
PspPI	GGNCC	6 cut(s)	103, 358, 890, 1204, 1577, 1650
PstNI	CAGNNNCTG	3 cut(s)	236, 986, 1556
PsuI	RGATCY	2 cut(s)	333, 1078
PvuII	CAGCTG	4 cut(s)	53, 454, 983, 1544
RsaI	GTAC	2 cut(s)	261, 673
RsaNI	GTAC	2 cut(s)	260, 672
RseI	CAYNNNNRTG	4 cut(s)	414, 1217, 1440, 1662
SaqAI	TTAA	1 cut(s)	1331
Sau96I	GGNCC	6 cut(s)	103, 358, 890, 1204, 1577, 1650
ScaI	AGTACT	1 cut(s)	673
SchI	GAGTC	3 cut(s)	442, 527, 1293
ScrFI	CCNGG	4 cut(s)	85, 477, 700, 778
SduI	GDGCHC	4 cut(s)	368, 442, 707, 1095
SexAI	ACCWGGT	1 cut(s)	475
SfaNI	GCATC	4 cut(s)	399, 561, 1165, 1231
SfcI	CTRYAG	2 cut(s)	537, 745
SinI	GGWCC	4 cut(s)	103, 890, 1204, 1577
SmiMI	CAYNNNNRTG	4 cut(s)	414, 1217, 1440, 1662
SmlI	CTYRAG	4 cut(s)	898, 908, 1094, 1420
SmoI	CTYRAG	4 cut(s)	898, 908, 1094, 1420
Sse9I	AATT	8 cut(s)	247, 603, 628, 644, 839, 1141, 1277, 1581
SseBI	AGGCCT	1 cut(s)	1597
SsiI	CCGC	7 cut(s)	29, 132, 406, 460, 550, 1054, 1575
SspI	AATATT	1 cut(s)	1534
SspMI	CTAG	5 cut(s)	302, 669, 879, 1599, 1641
StuI	AGGCCT	1 cut(s)	1597
StyD4I	CCNGG	4 cut(s)	83, 475, 698, 776
StyI	CCWWGG	1 cut(s)	409
TaaI	ACNGT	2 cut(s)	696, 1613
TaiI	ACGT	1 cut(s)	1126
TaqI	TCGA	2 cut(s)	120, 1177
TasI	AATT	8 cut(s)	247, 603, 628, 644, 839, 1141, 1277, 1581
TatI	WGTACW	1 cut(s)	671
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	2 cut(s)	233, 1135
Tru1I	TTAA	1 cut(s)	1331
Tru9I	TTAA	1 cut(s)	1331
TscAI	CASTG	5 cut(s)	142, 368, 920, 1089, 1224
TseFI	GTSAC	1 cut(s)	418
Tsp45I	GTSAC	1 cut(s)	418
TspDTI	ATGAA	2 cut(s)	1220, 1290
TspGWI	ACGGA	4 cut(s)	346, 903, 1361, 1407
TspRI	CASTG	5 cut(s)	142, 368, 920, 1089, 1224
Van91I	CCANNNNNTGG	2 cut(s)	479, 1586
VneI	GTGCAC	1 cut(s)	703
VpaK11BI	GGWCC	4 cut(s)	103, 890, 1204, 1577
XapI	RAATTY	2 cut(s)	1141, 1277
XbaI	TCTAGA	1 cut(s)	301
XceI	RCATGY	2 cut(s)	66, 625
XcmI	CCANNNNNNNNNTGG	1 cut(s)	40
XmiI	GTMKAC	1 cut(s)	1128
XspI	CTAG	5 cut(s)	302, 669, 879, 1599, 1641
ZrmI	AGTACT	1 cut(s)	673
Zsp2I	ATGCAT	4 cut(s)	64, 218, 376, 1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.