Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0010533

Physical Location & Seq

Genomic Coordinates Reverse (-)

86058 .. 88360

Gene Structure 2303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG000800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGGAGGAGGAGGAGGACTGCGAAAAGCGGCCAAGAAGATGGTGGTGGCAGCTGCCAATGCATGTGGTGGTTCCTTCTCTTCCAGGAGGAAGCCTCTTGTGGACCCCATCGTCTTCTTCGATCATACCACCGCCACTGCCTCTGCCTCTTTCTCAGGTTCTTCGGCTGTGTCTCCCACCAACTCCACAGCAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAATGCATTGCAAAGGAGACGGAATCTGCAACCACCAATTCTAACAATGTACCTTCCTCTTCTTCTTCTAATAAGAACTTGTGCGCAATATGTCTAGACCCTCTGAGTTACCATAGCAAGGGACGGATCTCAGGGCAGGCTATATTCACGGCCCAGTGCTCCCATGCATTCCACTTTGCCTGCATCTCTTCCAATGTCCGCCATGGTAGTGTCACCTGCCCCATCTGCCGTGCCCATTGGACTCAGCTGCCCCGCAATCTGAACCCACCTGGTGGTTCCCTTTCCTCTTGCAACCCAACTGATCCCATCCTCCAAATCCTTGATGACTCTATAGCCACTTTCCGCATCCACAGGCGCTCTTTCCTGCGCTCTGCTCGCTATGATGATGATGACCCAATTGAGCCTCCCGATCACATGCCTAATTTCCCCCGTCTCCAATTCTCTCTAGCACCCTTACCACCTAGTACTCCACCCCATGGCTTTCAACCGTCCTGGTGCACCACACACCCATATCATCCACCCCCACATCACCTGAGCTATAGCTCCACATCATTGTTACAATCGCCAACCAGGCCAAAGCCCTATACCACTATGTATGCCTCTTCGGACAGAGCTTATCTTTCGGTGAAATTGGCAGAGCAGCGAGCAACTGATTTTGTCTTGGTTGCTAGTCCCAACGGACCACACTTGAGGCTTCTCAAGCAGTGCATGGCATTGGTGGTTTTCTCCCTTAGACCTATTGATCGTTTGGCCATTGTTACCTACTCATCAGCTGCTGCTCGTGTCTTCCCTCTAAGACGCATGACATCTTATGGGAAGCGAACAGCCCAGCAGGTTATTGACCGCCTGTTCTACATGGGGCAAGCAGATCCAGTGGAAGGGCTCAAGAAAGGGATCAAGATACTTCAAGATCGTGTATACAAGAATCAAAATTCGGGTATCCTGCATCTTTCTGACACCCCAACTCGATCCTACCATGCTGCTCTCAATATGGACGTGCCCATTCCAGTGCATCGTTTTCATGTAGGATTTGGATTTGGCACTTCAAATGGTTTTATCATGCATGAATTTGAAGAGTTCCTCAGAAGACTCATAGGTGGTGTTGTTAGAGAAATCCAGTTAAGGATCAGCACAACGGAGGAAGCCAGCAGTAGGATTGTAAGAATAGGAGAGCTAAGAAACGGAGAAGAAAGGAAAATCTTAGTGGACTTGAGTGTTTGTGGACATATTTGTGTGGGATACAGCTACATAGAGGATGGTGAGATTGACGAACCTATCACAACAGGGGAAACTATGGTGAGCATAGGAGACGGTAAAAGTAATATTAGTGCAGCTGAAGCAGATTCTGCTGGGTCAGGGACGAGCGGTCCAATTATTGGTGGGAGGCCTAGTAGTGCAGACAGTTGGGACTACCATGATCCTTACATGGCTAGAAGATGGGCCAAACATTTGCATGGCTACAGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_2 zf-C3HC4 zf-RING_2 zf-rbx1

Protein Analysis

562

Amino Acids

61.56

Weight (kDa)

7.94

Isoelectric Point (pI)

60.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	100 - 150	2.1e-07	Ring finger domain
zf-rbx1	PF12678	100 - 150	1.3e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	101 - 149	1.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	101 - 135	1.8e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010533)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00090 FvH4_3g00090
malus_domestica	MD05G1364100.v1.1
prunus_persica	Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1 Prupe.4G001000_v2.0.a1
pyrus_communis	pycom05g33030
rosa_chinensis	RchiOBHm_Chr5g0000121
rosa_laevigata	RLG00000030843
rosa_multiflora	Rmu_sc0003125.1_g000002 Rmu_ssc0000243.1_g000019
rosa_roxburghii	Rroxscaffold_1G00075980
rosa_rugosa	Rorug04G0381700
rosa_samantha	Rh5AG000800 Rh5BG002000 Rh5CG000900 Rh5DG000800
rosa_wichuraiana	Rw5G000110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	443
AasI	GACNNNNNNGTC	1 cut(s)	110
Acc16I	TGCGCA	1 cut(s)	304
Acc36I	ACCTGC	2 cut(s)	443, 1042
AccB7I	CCANNNNNTGG	3 cut(s)	491, 695, 1595
AccBSI	CCGCTC	1 cut(s)	1584
AccI	GTMKAC	1 cut(s)	1137
AciI	CCGC	7 cut(s)	29, 132, 418, 472, 562, 1063, 1584
AclWI	GGATC	7 cut(s)	353, 515, 1082, 1121, 1182, 1352, 1631
AcoI	YGGCCR	2 cut(s)	30, 969
AcsI	RAATTY	2 cut(s)	1150, 1286
AcuI	CTGAAG	1 cut(s)	1575
AdeI	CACNNNGTG	1 cut(s)	491
AfaI	GTAC	2 cut(s)	270, 685
AfiI	CCNNNNNNNGG	6 cut(s)	337, 491, 695, 1097, 1371, 1595
AgsI	TTSAA	4 cut(s)	704, 1127, 1266, 1292
AhdI	GACNNNNNGTC	1 cut(s)	1584
AjiI	CACGTC	1 cut(s)	1216
AjnI	CCWGG	4 cut(s)	83, 487, 710, 788
AluBI	AGCT	9 cut(s)	53, 466, 756, 762, 833, 992, 1393, 1464, 1553
AluI	AGCT	9 cut(s)	53, 466, 756, 762, 833, 992, 1393, 1464, 1553
Alw21I	GWGCWC	2 cut(s)	380, 719
Alw26I	GTCTC	4 cut(s)	177, 230, 656, 1521
Alw44I	GTGCAC	1 cut(s)	715
AlwI	GGATC	7 cut(s)	353, 515, 1082, 1121, 1182, 1352, 1631
AlwNI	CAGNNNCTG	2 cut(s)	995, 1565
AoxI	GGCC	6 cut(s)	30, 369, 791, 969, 1604, 1659
ApaLI	GTGCAC	1 cut(s)	715
ApeKI	GCWGC	9 cut(s)	50, 53, 191, 466, 859, 992, 995, 1199, 1550
ApoI	RAATTY	2 cut(s)	1150, 1286
AspLEI	GCGC	3 cut(s)	305, 576, 588
AspS9I	GGNCC	5 cut(s)	103, 370, 899, 1586, 1659
AsuHPI	GGTGA	5 cut(s)	424, 740, 856, 1490, 1528
AvaII	GGWCC	3 cut(s)	103, 899, 1586
BaeGI	GKGCMC	3 cut(s)	454, 719, 1221
BalI	TGGCCA	1 cut(s)	971
BanII	GRGCYC	1 cut(s)	1104
BauI	CACGAG	1 cut(s)	999
BbsI	GAAGAC	3 cut(s)	106, 997, 1312
Bbv12I	GWGCWC	2 cut(s)	380, 719
BbvI	GCAGC	9 cut(s)	40, 62, 203, 453, 871, 979, 982, 1186, 1562
BccI	CCATC	6 cut(s)	34, 116, 449, 533, 1469, 1650
BceAI	ACGGC	2 cut(s)	384, 432
BciT130I	CCWGG	4 cut(s)	85, 489, 712, 790
BciVI	GTATCC	2 cut(s)	1169, 1451
BcoDI	GTCTC	4 cut(s)	177, 230, 656, 1521
BfaI	CTAG	6 cut(s)	314, 665, 681, 888, 1608, 1650
BfmI	CTRYAG	3 cut(s)	549, 757, 1678
BfoI	RGCGCY	1 cut(s)	577
BfuAI	ACCTGC	2 cut(s)	443, 1042
BfuI	GTATCC	2 cut(s)	1169, 1451
BglI	GCCNNNNNGGC	1 cut(s)	790
BmcAI	AGTACT	1 cut(s)	685
Bme1390I	CCNGG	4 cut(s)	85, 489, 712, 790
Bme18I	GGWCC	3 cut(s)	103, 899, 1586
BmeRI	GACNNNNNGTC	1 cut(s)	1584
BmgBI	CACGTC	1 cut(s)	1216
BmgT120I	GGNCC	5 cut(s)	103, 370, 899, 1586, 1659
BmiI	GGNNCC	3 cut(s)	73, 105, 496
BmrFI	CCNGG	4 cut(s)	85, 489, 712, 790
BmrI	ACTGGG	1 cut(s)	367
BmsI	GCATC	4 cut(s)	411, 573, 1174, 1240
BmuI	ACTGGG	1 cut(s)	367
BpiI	GAAGAC	3 cut(s)	106, 997, 1312
BplI	GAGNNNNNCTC	2 cut(s)	79, 111
Bpu10I	CCTNAGC	1 cut(s)	752
BpuEI	CTTGAG	4 cut(s)	902, 928, 1088, 1450
BsaJI	CCNNGG	2 cut(s)	421, 694
BsaXI	ACNNNNNCTCC	2 cut(s)	1594, 1624
Bsc4I	CCNNNNNNNGG	6 cut(s)	337, 491, 695, 1097, 1371, 1595
Bse1I	ACTGG	4 cut(s)	373, 1091, 1226, 1336
Bse3DI	GCAATG	1 cut(s)	225
BseBI	CCWGG	4 cut(s)	85, 489, 712, 790
BseDI	CCNNGG	2 cut(s)	421, 694
BseGI	GGATG	4 cut(s)	525, 564, 733, 1480
BseLI	CCNNNNNNNGG	6 cut(s)	337, 491, 695, 1097, 1371, 1595
BseMI	GCAATG	1 cut(s)	225
BseMII	CTCAG	6 cut(s)	168, 314, 363, 476, 743, 1315
BseNI	ACTGG	4 cut(s)	373, 1091, 1226, 1336
BseRI	GAGGAG	3 cut(s)	21, 24, 27
BseSI	GKGCMC	3 cut(s)	454, 719, 1221
BseXI	GCAGC	9 cut(s)	40, 62, 203, 453, 871, 979, 982, 1186, 1562
BseYI	CCCAGC	2 cut(s)	1047, 1568
BsgI	GTGCAG	2 cut(s)	1569, 1635
BshFI	GGCC	6 cut(s)	32, 371, 793, 971, 1606, 1661
BsiHKAI	GWGCWC	2 cut(s)	380, 719
BslFI	GGGAC	4 cut(s)	354, 876, 1591, 1640
BslI	CCNNNNNNNGG	6 cut(s)	337, 491, 695, 1097, 1371, 1595
BsmAI	GTCTC	4 cut(s)	177, 230, 656, 1521
BsmBI	CGTCTC	3 cut(s)	230, 656, 1521
BsmFI	GGGAC	4 cut(s)	354, 876, 1591, 1640
BsmI	GAATGC	2 cut(s)	227, 386
BsnI	GGCC	6 cut(s)	32, 371, 793, 971, 1606, 1661
Bsp1286I	GDGCHC	5 cut(s)	380, 454, 719, 1104, 1221
Bsp19I	CCATGG	2 cut(s)	421, 694
BspACI	CCGC	7 cut(s)	29, 132, 418, 472, 562, 1063, 1584
BspANI	GGCC	6 cut(s)	32, 371, 793, 971, 1606, 1661
BspCNI	CTCAG	6 cut(s)	167, 315, 362, 475, 744, 1314
BspLI	GGNNCC	3 cut(s)	73, 105, 496
BspMI	ACCTGC	2 cut(s)	443, 1042
BspPI	GGATC	7 cut(s)	353, 515, 1082, 1121, 1182, 1352, 1631
BsrBI	CCGCTC	1 cut(s)	1584
BsrDI	GCAATG	1 cut(s)	225
BsrI	ACTGG	4 cut(s)	373, 1091, 1226, 1336
BssECI	CCNNGG	2 cut(s)	421, 694
BssNAI	GTATAC	1 cut(s)	1138
BssSI	CACGAG	1 cut(s)	999
BssT1I	CCWWGG	2 cut(s)	421, 694
Bst1107I	GTATAC	1 cut(s)	1138
Bst2BI	CACGAG	1 cut(s)	999
Bst2UI	CCWGG	4 cut(s)	85, 489, 712, 790
Bst4CI	ACNGT	3 cut(s)	708, 1532, 1622
Bst6I	CTCTTC	5 cut(s)	85, 283, 412, 826, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1565
BstC8I	GCNNGC	6 cut(s)	357, 400, 595, 864, 1083, 1366
BstDSI	CCRYGG	2 cut(s)	421, 694
BstF5I	GGATG	4 cut(s)	525, 564, 733, 1480
BstH2I	RGCGCY	1 cut(s)	577
BstHHI	GCGC	3 cut(s)	305, 576, 588
BstMAI	GTCTC	4 cut(s)	177, 230, 656, 1521
BstMWI	GCNNNNNNNGC	7 cut(s)	59, 444, 594, 790, 919, 1556, 1565
BstNI	CCWGG	4 cut(s)	85, 489, 712, 790
BstNSI	RCATGY	2 cut(s)	66, 637
BstSCI	CCNGG	4 cut(s)	83, 487, 710, 788
BstSFI	CTRYAG	3 cut(s)	549, 757, 1678
BstSLI	GKGCMC	3 cut(s)	454, 719, 1221
BstV1I	GCAGC	9 cut(s)	40, 62, 203, 453, 871, 979, 982, 1186, 1562
BstV2I	GAAGAC	3 cut(s)	106, 997, 1312
BstX2I	RGATCY	2 cut(s)	345, 1087
BstXI	CCANNNNNNTGG	1 cut(s)	40
BstYI	RGATCY	2 cut(s)	345, 1087
BstZ17I	GTATAC	1 cut(s)	1138
BsuI	GTATCC	2 cut(s)	1169, 1451
BsuRI	GGCC	6 cut(s)	32, 371, 793, 971, 1606, 1661
BtgI	CCRYGG	2 cut(s)	421, 694
BtrI	CACGTC	1 cut(s)	1216
BtsCI	GGATG	4 cut(s)	525, 564, 733, 1480
BtsI	GCAGTG	2 cut(s)	135, 929
BtsIMutI	CAGTG	5 cut(s)	135, 380, 929, 1098, 1233
BveI	ACCTGC	2 cut(s)	443, 1042
Cac8I	GCNNGC	6 cut(s)	357, 400, 595, 864, 1083, 1366
CaiI	CAGNNNCTG	2 cut(s)	995, 1565
CfoI	GCGC	3 cut(s)	305, 576, 588
Cfr13I	GGNCC	5 cut(s)	103, 370, 899, 1586, 1659
CseI	GACGC	1 cut(s)	1026
CsiI	ACCWGGT	1 cut(s)	487
Csp6I	GTAC	2 cut(s)	269, 684
CspCI	CAANNNNNGTGG	2 cut(s)	46, 81
CviQI	GTAC	2 cut(s)	269, 684
DraIII	CACNNNGTG	1 cut(s)	491
DrdI	GACNNNNNNGTC	1 cut(s)	110
DriI	GACNNNNNGTC	1 cut(s)	1584
DseDI	GACNNNNNNGTC	1 cut(s)	110
EaeI	YGGCCR	2 cut(s)	30, 969
Eam1104I	CTCTTC	5 cut(s)	85, 283, 412, 826, 1287
Eam1105I	GACNNNNNGTC	1 cut(s)	1584
EarI	CTCTTC	5 cut(s)	85, 283, 412, 826, 1287
EciI	GGCGGA	1 cut(s)	407
Eco130I	CCWWGG	2 cut(s)	421, 694
Eco147I	AGGCCT	1 cut(s)	1606
Eco24I	GRGCYC	1 cut(s)	1104
Eco47I	GGWCC	3 cut(s)	103, 899, 1586
Eco57I	CTGAAG	1 cut(s)	1575
EcoRII	CCWGG	4 cut(s)	83, 487, 710, 788
EcoT14I	CCWWGG	2 cut(s)	421, 694
EcoT22I	ATGCAT	4 cut(s)	64, 227, 388, 1284
EcoT38I	GRGCYC	1 cut(s)	1104
ErhI	CCWWGG	2 cut(s)	421, 694
Esp3I	CGTCTC	3 cut(s)	230, 656, 1521
FaqI	GGGAC	4 cut(s)	354, 876, 1591, 1640
FauI	CCCGC	1 cut(s)	479
FblI	GTMKAC	1 cut(s)	1137
FokI	GGATG	4 cut(s)	512, 551, 720, 1487
FriOI	GRGCYC	1 cut(s)	1104
FspBI	CTAG	6 cut(s)	314, 665, 681, 888, 1608, 1650
FspI	TGCGCA	1 cut(s)	304
GlaI	GCGC	3 cut(s)	304, 575, 587
GsaI	CCCAGC	2 cut(s)	1051, 1572
HaeII	RGCGCY	1 cut(s)	577
HaeIII	GGCC	6 cut(s)	32, 371, 793, 971, 1606, 1661
HgaI	GACGC	1 cut(s)	1026
HhaI	GCGC	3 cut(s)	305, 576, 588
Hin6I	GCGC	3 cut(s)	303, 574, 586
HinP1I	GCGC	3 cut(s)	303, 574, 586
HinfI	GANTC	6 cut(s)	242, 460, 545, 1144, 1308, 1562
HphI	GGTGA	5 cut(s)	424, 740, 856, 1490, 1528
Hpy166II	GTNNAC	5 cut(s)	103, 717, 1138, 1426, 1442
Hpy188I	TCNGA	5 cut(s)	324, 480, 826, 1174, 1304
Hpy188III	TCNNGA	5 cut(s)	314, 626, 1105, 1117, 1127
Hpy8I	GTNNAC	5 cut(s)	103, 717, 1138, 1426, 1442
HpyAV	CCTTC	3 cut(s)	85, 282, 1091
HpyCH4III	ACNGT	3 cut(s)	708, 1532, 1622
HpyCH4IV	ACGT	1 cut(s)	1215
HpyF10VI	GCNNNNNNNGC	7 cut(s)	59, 444, 594, 790, 919, 1556, 1565
HpySE526I	ACGT	1 cut(s)	1215
HspAI	GCGC	3 cut(s)	303, 574, 586
LmnI	GCTCC	2 cut(s)	383, 767
Lsp1109I	GCAGC	9 cut(s)	40, 62, 203, 453, 871, 979, 982, 1186, 1562
LweI	GCATC	4 cut(s)	411, 573, 1174, 1240
MabI	ACCWGGT	1 cut(s)	487
MaeI	CTAG	6 cut(s)	314, 665, 681, 888, 1608, 1650
MaeII	ACGT	1 cut(s)	1215
MaeIII	GTNAC	4 cut(s)	326, 430, 774, 976
MbiI	CCGCTC	1 cut(s)	1584
MfeI	CAATTG	1 cut(s)	615
MflI	RGATCY	2 cut(s)	345, 1087
MhlI	GDGCHC	5 cut(s)	380, 454, 719, 1104, 1221
MlsI	TGGCCA	1 cut(s)	971
MluCI	AATT	8 cut(s)	256, 615, 640, 656, 848, 1150, 1286, 1590
MluNI	TGGCCA	1 cut(s)	971
MlyI	GAGTC	3 cut(s)	454, 539, 1302
Mox20I	TGGCCA	1 cut(s)	971
Mph1103I	ATGCAT	4 cut(s)	64, 227, 388, 1284
MscI	TGGCCA	1 cut(s)	971
MseI	TTAA	1 cut(s)	1340
MslI	CAYNNNNRTG	4 cut(s)	426, 1226, 1449, 1671
Msp20I	TGGCCA	1 cut(s)	971
MspA1I	CMGCKG	4 cut(s)	53, 466, 992, 1553
MspR9I	CCNGG	4 cut(s)	85, 489, 712, 790
MunI	CAATTG	1 cut(s)	615
Mva1269I	GAATGC	2 cut(s)	227, 386
MvaI	CCWGG	4 cut(s)	85, 489, 712, 790
MwoI	GCNNNNNNNGC	7 cut(s)	59, 444, 594, 790, 919, 1556, 1565
NcoI	CCATGG	2 cut(s)	421, 694
NlaIV	GGNNCC	3 cut(s)	73, 105, 496
NmuCI	GTSAC	1 cut(s)	430
NsbI	TGCGCA	1 cut(s)	304
NsiI	ATGCAT	4 cut(s)	64, 227, 388, 1284
NspI	RCATGY	2 cut(s)	66, 637
PaqCI	CACCTGC	1 cut(s)	443
PceI	AGGCCT	1 cut(s)	1606
PcsI	WCGNNNNNNNCGW	1 cut(s)	117
PctI	GAATGC	2 cut(s)	227, 386
PfeI	GAWTC	3 cut(s)	242, 1144, 1562
PflMI	CCANNNNNTGG	3 cut(s)	491, 695, 1595
PfoI	TCCNGGA	1 cut(s)	83
PleI	GAGTC	3 cut(s)	454, 539, 1302
PpsI	GAGTC	3 cut(s)	454, 539, 1302
Psp6I	CCWGG	4 cut(s)	83, 487, 710, 788
PspFI	CCCAGC	2 cut(s)	1047, 1568
PspGI	CCWGG	4 cut(s)	83, 487, 710, 788
PspN4I	GGNNCC	3 cut(s)	73, 105, 496
PspPI	GGNCC	5 cut(s)	103, 370, 899, 1586, 1659
PstNI	CAGNNNCTG	2 cut(s)	995, 1565
PsuI	RGATCY	2 cut(s)	345, 1087
PvuII	CAGCTG	4 cut(s)	53, 466, 992, 1553
RsaI	GTAC	2 cut(s)	270, 685
RsaNI	GTAC	2 cut(s)	269, 684
RseI	CAYNNNNRTG	4 cut(s)	426, 1226, 1449, 1671
SaqAI	TTAA	1 cut(s)	1340
Sau96I	GGNCC	5 cut(s)	103, 370, 899, 1586, 1659
ScaI	AGTACT	1 cut(s)	685
SchI	GAGTC	3 cut(s)	454, 539, 1302
ScrFI	CCNGG	4 cut(s)	85, 489, 712, 790
SduI	GDGCHC	5 cut(s)	380, 454, 719, 1104, 1221
SexAI	ACCWGGT	1 cut(s)	487
SfaNI	GCATC	4 cut(s)	411, 573, 1174, 1240
SfcI	CTRYAG	3 cut(s)	549, 757, 1678
SinI	GGWCC	3 cut(s)	103, 899, 1586
SmiMI	CAYNNNNRTG	4 cut(s)	426, 1226, 1449, 1671
SmlI	CTYRAG	4 cut(s)	907, 917, 1103, 1429
SmoI	CTYRAG	4 cut(s)	907, 917, 1103, 1429
Sse9I	AATT	8 cut(s)	256, 615, 640, 656, 848, 1150, 1286, 1590
SseBI	AGGCCT	1 cut(s)	1606
SsiI	CCGC	7 cut(s)	29, 132, 418, 472, 562, 1063, 1584
SspI	AATATT	1 cut(s)	1543
SspMI	CTAG	6 cut(s)	314, 665, 681, 888, 1608, 1650
StuI	AGGCCT	1 cut(s)	1606
StyD4I	CCNGG	4 cut(s)	83, 487, 710, 788
StyI	CCWWGG	2 cut(s)	421, 694
TaaI	ACNGT	3 cut(s)	708, 1532, 1622
TaiI	ACGT	1 cut(s)	1218
TaqI	TCGA	2 cut(s)	120, 1186
TasI	AATT	8 cut(s)	256, 615, 640, 656, 848, 1150, 1286, 1590
TatI	WGTACW	1 cut(s)	683
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	3 cut(s)	242, 1144, 1562
Tru1I	TTAA	1 cut(s)	1340
Tru9I	TTAA	1 cut(s)	1340
TscAI	CASTG	5 cut(s)	142, 380, 929, 1098, 1233
TseFI	GTSAC	1 cut(s)	430
TseI	GCWGC	9 cut(s)	50, 53, 191, 466, 859, 992, 995, 1199, 1550
Tsp45I	GTSAC	1 cut(s)	430
TspDTI	ATGAA	2 cut(s)	1229, 1299
TspGWI	ACGGA	5 cut(s)	254, 358, 912, 1370, 1416
TspRI	CASTG	5 cut(s)	142, 380, 929, 1098, 1233
Van91I	CCANNNNNTGG	3 cut(s)	491, 695, 1595
VneI	GTGCAC	1 cut(s)	715
VpaK11BI	GGWCC	3 cut(s)	103, 899, 1586
XapI	RAATTY	2 cut(s)	1150, 1286
XbaI	TCTAGA	1 cut(s)	313
XceI	RCATGY	2 cut(s)	66, 637
XcmI	CCANNNNNNNNNTGG	1 cut(s)	40
XmiI	GTMKAC	1 cut(s)	1137
XspI	CTAG	6 cut(s)	314, 665, 681, 888, 1608, 1650
ZrmI	AGTACT	1 cut(s)	685
Zsp2I	ATGCAT	4 cut(s)	64, 227, 388, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.