4Fe-4S single cluster domain of Ferredoxin I
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g51170 |
| malus_domestica | MD17G1030400.v1.1 |
| prunus_persica | Prupe.3G207200_v2.0.a1 Prupe.3G289400_v2.0.a1 Prupe.3G289400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0172761 |
| rosa_laevigata | RLG00000022131 |
| rosa_multiflora | Rmu_sc0010744.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00079460 Rroxscaffold_2G00079550 |
| rosa_rugosa | Rorug02G0561300 Rorug02G0561400 Rorug02G0562900 |
| rosa_samantha | Rh2AG638600 Rh2BG652100 Rh2CG618400 Rh2DG666200 |
| rosa_wichuraiana | Rw2G052750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 355 |
| AcoI | YGGCCR | 1 cut(s) | 185 |
| AcsI | RAATTY | 1 cut(s) | 397 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AflIII | ACRYGT | 1 cut(s) | 30 |
| AgsI | TTSAA | 2 cut(s) | 71, 262 |
| Alw21I | GWGCWC | 2 cut(s) | 12, 165 |
| Alw44I | GTGCAC | 1 cut(s) | 8 |
| Ama87I | CYCGRG | 1 cut(s) | 164 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApaLI | GTGCAC | 1 cut(s) | 8 |
| ApeKI | GCWGC | 1 cut(s) | 248 |
| ApoI | RAATTY | 1 cut(s) | 397 |
| AspLEI | GCGC | 1 cut(s) | 355 |
| AsuHPI | GGTGA | 2 cut(s) | 89, 293 |
| AvaI | CYCGRG | 1 cut(s) | 164 |
| BaeGI | GKGCMC | 1 cut(s) | 12 |
| Bbv12I | GWGCWC | 2 cut(s) | 12, 165 |
| BbvI | GCAGC | 1 cut(s) | 235 |
| BccI | CCATC | 2 cut(s) | 306, 376 |
| BisI | GCNGC | 1 cut(s) | 249 |
| BlsI | GCNGC | 1 cut(s) | 250 |
| BmeT110I | CYCGRG | 1 cut(s) | 164 |
| BpuEI | CTTGAG | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 1 cut(s) | 182 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 2 cut(s) | 158, 413 |
| BseDI | CCNNGG | 1 cut(s) | 182 |
| BseGI | GGATG | 2 cut(s) | 56, 174 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseNI | ACTGG | 2 cut(s) | 158, 413 |
| BseRI | GAGGAG | 2 cut(s) | 228, 293 |
| BseSI | GKGCMC | 1 cut(s) | 12 |
| BseXI | GCAGC | 1 cut(s) | 235 |
| Bsh1236I | CGCG | 1 cut(s) | 355 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BsiHKAI | GWGCWC | 2 cut(s) | 12, 165 |
| BsiHKCI | CYCGRG | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmI | GAATGC | 2 cut(s) | 129, 389 |
| BsnI | GGCC | 1 cut(s) | 187 |
| BsoBI | CYCGRG | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 2 cut(s) | 12, 165 |
| Bsp143I | GATC | 2 cut(s) | 85, 375 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspFNI | CGCG | 1 cut(s) | 355 |
| BsrI | ACTGG | 2 cut(s) | 158, 413 |
| BssECI | CCNNGG | 1 cut(s) | 182 |
| BssMI | GATC | 2 cut(s) | 85, 375 |
| Bst4CI | ACNGT | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 1 cut(s) | 357 |
| BstDEI | CTNAG | 1 cut(s) | 252 |
| BstF5I | GGATG | 2 cut(s) | 56, 174 |
| BstFNI | CGCG | 1 cut(s) | 355 |
| BstHHI | GCGC | 1 cut(s) | 355 |
| BstKTI | GATC | 2 cut(s) | 88, 378 |
| BstMBI | GATC | 2 cut(s) | 85, 375 |
| BstNSI | RCATGY | 1 cut(s) | 34 |
| BstSLI | GKGCMC | 1 cut(s) | 12 |
| BstUI | CGCG | 1 cut(s) | 355 |
| BstV1I | GCAGC | 1 cut(s) | 235 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| BtsCI | GGATG | 2 cut(s) | 56, 174 |
| BtsIMutI | CAGTG | 2 cut(s) | 165, 406 |
| Cac8I | GCNNGC | 1 cut(s) | 357 |
| CfoI | GCGC | 1 cut(s) | 355 |
| CviAII | CATG | 3 cut(s) | 31, 114, 244 |
| CviJI | RGCY | 6 cut(s) | 44, 181, 187, 248, 284, 359 |
| CviKI_1 | RGCY | 6 cut(s) | 44, 181, 187, 248, 284, 359 |
| DdeI | CTNAG | 1 cut(s) | 252 |
| DpnI | GATC | 2 cut(s) | 87, 377 |
| DpnII | GATC | 2 cut(s) | 85, 375 |
| EaeI | YGGCCR | 1 cut(s) | 185 |
| Eco88I | CYCGRG | 1 cut(s) | 164 |
| FaeI | CATG | 3 cut(s) | 34, 117, 247 |
| FaiI | YATR | 4 cut(s) | 32, 115, 245, 371 |
| FatI | CATG | 3 cut(s) | 30, 113, 243 |
| Fnu4HI | GCNGC | 1 cut(s) | 249 |
| FokI | GGATG | 2 cut(s) | 63, 161 |
| Fsp4HI | GCNGC | 1 cut(s) | 249 |
| GlaI | GCGC | 1 cut(s) | 354 |
| GluI | GCNGC | 1 cut(s) | 249 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| HhaI | GCGC | 1 cut(s) | 355 |
| Hin1II | CATG | 3 cut(s) | 34, 117, 247 |
| Hin6I | GCGC | 1 cut(s) | 353 |
| HinP1I | GCGC | 1 cut(s) | 353 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HinfI | GANTC | 1 cut(s) | 110 |
| HphI | GGTGA | 2 cut(s) | 89, 293 |
| Hpy166II | GTNNAC | 3 cut(s) | 10, 109, 124 |
| Hpy188I | TCNGA | 1 cut(s) | 50 |
| Hpy188III | TCNNGA | 1 cut(s) | 379 |
| Hpy8I | GTNNAC | 3 cut(s) | 10, 109, 124 |
| HpyAV | CCTTC | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 1 cut(s) | 77 |
| HpyCH4V | TGCA | 3 cut(s) | 10, 56, 129 |
| HpyF3I | CTNAG | 1 cut(s) | 252 |
| Hsp92II | CATG | 3 cut(s) | 34, 117, 247 |
| HspAI | GCGC | 1 cut(s) | 353 |
| Kzo9I | GATC | 2 cut(s) | 85, 375 |
| LpnPI | CCDG | 7 cut(s) | 132, 171, 191, 243, 351, 388, 394 |
| Lsp1109I | GCAGC | 1 cut(s) | 235 |
| MaeIII | GTNAC | 1 cut(s) | 77 |
| MalI | GATC | 2 cut(s) | 87, 377 |
| MboI | GATC | 2 cut(s) | 85, 375 |
| MboII | GAAGA | 4 cut(s) | 161, 338, 341, 385 |
| MhlI | GDGCHC | 2 cut(s) | 12, 165 |
| MluCI | AATT | 1 cut(s) | 397 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MnlI | CCTC | 8 cut(s) | 34, 91, 182, 192, 206, 209, 271, 274 |
| MseI | TTAA | 1 cut(s) | 63 |
| Mva1269I | GAATGC | 2 cut(s) | 129, 389 |
| MvnI | CGCG | 1 cut(s) | 355 |
| NdeII | GATC | 2 cut(s) | 85, 375 |
| NlaIII | CATG | 3 cut(s) | 34, 117, 247 |
| NmeAIII | GCCGAG | 1 cut(s) | 163 |
| NmuCI | GTSAC | 1 cut(s) | 77 |
| NspI | RCATGY | 1 cut(s) | 34 |
| PaeR7I | CTCGAG | 1 cut(s) | 164 |
| PciI | ACATGT | 1 cut(s) | 30 |
| PctI | GAATGC | 2 cut(s) | 129, 389 |
| PkrI | GCNGC | 1 cut(s) | 250 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| PscI | ACATGT | 1 cut(s) | 30 |
| PspXI | VCTCGAGB | 1 cut(s) | 164 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| SatI | GCNGC | 1 cut(s) | 249 |
| Sau3AI | GATC | 2 cut(s) | 85, 375 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SduI | GDGCHC | 2 cut(s) | 12, 165 |
| SetI | ASST | 3 cut(s) | 29, 102, 220 |
| Sfr274I | CTCGAG | 1 cut(s) | 164 |
| SlaI | CTCGAG | 1 cut(s) | 164 |
| SmlI | CTYRAG | 2 cut(s) | 164, 342 |
| SmoI | CTYRAG | 2 cut(s) | 164, 342 |
| Sse9I | AATT | 1 cut(s) | 397 |
| SspI | AATATT | 1 cut(s) | 207 |
| TaaI | ACNGT | 1 cut(s) | 77 |
| TaqI | TCGA | 1 cut(s) | 165 |
| TasI | AATT | 1 cut(s) | 397 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TscAI | CASTG | 2 cut(s) | 165, 413 |
| TseFI | GTSAC | 1 cut(s) | 77 |
| TseI | GCWGC | 1 cut(s) | 248 |
| Tsp45I | GTSAC | 1 cut(s) | 77 |
| TspDTI | ATGAA | 4 cut(s) | 122, 232, 306, 386 |
| TspGWI | ACGGA | 1 cut(s) | 216 |
| TspRI | CASTG | 2 cut(s) | 165, 413 |
| VneI | GTGCAC | 1 cut(s) | 8 |
| XapI | RAATTY | 1 cut(s) | 397 |
| XceI | RCATGY | 1 cut(s) | 34 |
| XhoI | CTCGAG | 1 cut(s) | 164 |