Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007049

Physical Location & Seq

Genomic Coordinates Forward (+)

8894982 .. 8897863

Gene Structure 2882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00086730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGCTTGTCAAGGCTGGGGCGCCTGTTGATCAGACCATAAAGACTCTCTCCGTCTACCTGGAGAAGGGTGACTGCATTATTGATGGTGGTAATGAGTGGTATGAGAACACTGAGAGGAGGCAGAAAGCCATGGCTGAATTGGGTCTTCTTTACCTTGGAATGGGAGTTTCAGGTGGCGAAGAGGGGGCTCGATATGGACCCTCTATGATGCCTGGAGGATCCTTTGAGGCCTATAAGTACATTGAAGACATCCTTCTTAAGGTGTCAGCTCAAGTTCCGGACAGTGGCCCCTGTGTGACTTACGTTGGCAAAGGTGGGTCTGGTAACTTTGTGAAGATGATTCATAATGGAATTGAATATGGTGACATGCAGCTGATAGCAGAGGCTTATGATGTTCTTAAATCTGTTGGGAAGTTGTCAAATGAGGAACTACAAAATGTTTTCTCAGAATGGAACAAGGGAGAGCTGCTGAGCTTCTTGATTGAAATCACTGCAGATATTTTTGGAATCAAGGACGACAAGGGAGATGGATATTTGGTGGACAAGGTTTTGGACAAGACCGGCATGAAGGGTACTGGTAAATGGACCGTACAGCAAGCTGCTGAACTATCCATTGCCGCTCCCACAATTGAATCTTCTTTGGATGCAAGGTTCCTCAGTGGGTTAAAGGATGAGAGGGTTGAAGCTGCTAAAGTGTTCAAAGCAGGTGGCTTTGGTGATATCTTGACTGACCAAGAGGTGGATAAGGCAAAGTTGGTTGATGATGTGAGGCAAGCTCTTTATGCATCCAAGATATGCAGTTATGCACAGGGCATGAATTTGATCCGTGCAAAGAGTATTGAGAAGGGATGGGACTTGAAGTTGGGCGAATTGGCTAGGATTTGGAAGGGAGGTTGCATCATTCGAGCTGTGTTCTTGGACAGAATTAAGCAGGCTTACGATAGGAACTGTGATCTTCCAAACCTTCTTGTGGACCCTGAGTTTTCGAAGGAGATCATTGAGCGACAGTCTGCGTGGCGAAGGGTGGTATGCCTTGCTATCAACTCAGGCATCAGTACCCCAGGTATGTCAGCTAGTCTTGCTTATTTTGACACCTACAGAAGGGCGAGACTGCCAGCTAACTTGGTCCAAGCTCAACGCGACTACTTTGGTGCTCATACATATGAAAGAACTGATGTTGAAGGTGCTTTCCACACTGAATGGTTCAAGATTGCTAAGCAATCCAAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003674 GO:0003824 GO:0004616 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006950 GO:0006970 GO:0008037 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009566 GO:0009567 GO:0009570 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0009988 GO:0010033 GO:0010035 GO:0016043 GO:0016491 GO:0016614 GO:0016616 GO:0019822 GO:0019953 GO:0022412 GO:0022414 GO:0032501 GO:0032504 GO:0033993 GO:0042221 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045026 GO:0050896 GO:0051704 GO:0055114 GO:0061024 GO:0061025 GO:0061936 GO:0071840 GO:0080173 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00030 ko00480 ko01100 ko01110 ko01120 ko01130 ko01200 map00030 map00480 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

6PGD NAD_binding_2

Protein Analysis

410

Amino Acids

45.32

Weight (kDa)

5.45

Isoelectric Point (pI)

29.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_2	PF03446	1 - 103	7.1e-25	NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD	PF00393	108 - 401	3.4e-127	6-phosphogluconate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02360 AT3G02360
fragaria_vesca	FvH4_6g45960 FvH4_6g45960
malus_domestica	MD09G1078700.v1.1 MD17G1068900.v1.1
prunus_persica	Prupe.3G245700_v2.0.a1 Prupe.3G245700_v2.0.a1 Prupe.3G245700_v2.0.a1
pyrus_communis	pycom09g00550 pycom17g06930
rosa_chinensis	RchiOBHm_Chr2g0164191
rosa_laevigata	RLG00000021443
rosa_multiflora	Rmu_sc0001427.1_g000016 Rmu_sc0025732.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086730
rosa_rugosa	Rorug02G0506700 Rorug02G0506800 Rorug02G0506900 Rorug02G0507000
rosa_samantha	Rh2AG575200 Rh2BG585900 Rh2CG556800 Rh2DG595500
rosa_wichuraiana	Rw2G047610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	695
Acc36I	ACCTGC	1 cut(s)	695
AccB1I	GGYRCC	1 cut(s)	19
AccB7I	CCANNNNNTGG	1 cut(s)	739
AccBSI	CCGCTC	1 cut(s)	620
AccI	GTMKAC	1 cut(s)	54
AccII	CGCG	1 cut(s)	1140
AccIII	TCCGGA	1 cut(s)	277
AciI	CCGC	1 cut(s)	618
AclWI	GGATC	3 cut(s)	213, 226, 817
AcsI	RAATTY	1 cut(s)	817
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	4 cut(s)	239, 574, 591, 1057
AfiI	CCNNNNNNNGG	7 cut(s)	64, 160, 259, 284, 739, 970, 1101
AflII	CTTAAG	1 cut(s)	257
AgsI	TTSAA	9 cut(s)	245, 356, 485, 632, 683, 700, 859, 1181, 1207
AjnI	CCWGG	3 cut(s)	57, 211, 1060
AloI	GAACNNNNNNTCC	2 cut(s)	635, 667
Alw21I	GWGCWC	1 cut(s)	1156
Alw26I	GTCTC	1 cut(s)	1102
AlwI	GGATC	3 cut(s)	213, 226, 817
Aor13HI	TCCGGA	1 cut(s)	277
AoxI	GGCC	2 cut(s)	228, 286
ApeKI	GCWGC	4 cut(s)	370, 466, 599, 686
ApoI	RAATTY	1 cut(s)	817
AspLEI	GCGC	1 cut(s)	22
AspS9I	GGNCC	5 cut(s)	197, 287, 585, 973, 1126
AsuHPI	GGTGA	3 cut(s)	80, 374, 728
AsuII	TTCGAA	1 cut(s)	986
AvaII	GGWCC	4 cut(s)	197, 585, 973, 1126
BamHI	GGATCC	1 cut(s)	218
BanI	GGYRCC	1 cut(s)	19
BanII	GRGCYC	1 cut(s)	190
BbsI	GAAGAC	2 cut(s)	137, 252
Bbv12I	GWGCWC	1 cut(s)	1156
BbvI	GCAGC	4 cut(s)	382, 453, 586, 673
BccI	CCATC	3 cut(s)	77, 521, 843
BciT130I	CCWGG	3 cut(s)	59, 213, 1062
BclI	TGATCA	1 cut(s)	28
BcoDI	GTCTC	1 cut(s)	1102
BfaI	CTAG	2 cut(s)	876, 1074
BfmI	CTRYAG	2 cut(s)	492, 1096
BfoI	RGCGCY	1 cut(s)	23
BfrI	CTTAAG	1 cut(s)	257
BfuAI	ACCTGC	1 cut(s)	695
BisI	GCNGC	5 cut(s)	371, 467, 600, 618, 687
BlpI	GCTNAGC	2 cut(s)	470, 1215
BlsI	GCNGC	5 cut(s)	372, 468, 601, 619, 688
Bme1390I	CCNGG	3 cut(s)	59, 213, 1062
Bme18I	GGWCC	4 cut(s)	197, 585, 973, 1126
BmgT120I	GGNCC	5 cut(s)	197, 287, 585, 973, 1126
BmiI	GGNNCC	6 cut(s)	21, 199, 220, 289, 653, 975
BmrFI	CCNGG	3 cut(s)	59, 213, 1062
BmsI	GCATC	5 cut(s)	198, 634, 794, 906, 1059
BpiI	GAAGAC	2 cut(s)	137, 252
BplI	GAGNNNNNCTC	2 cut(s)	760, 792
BpmI	CTGGAG	2 cut(s)	80, 234
Bpu1102I	GCTNAGC	2 cut(s)	470, 1215
Bpu14I	TTCGAA	1 cut(s)	986
BpuEI	CTTGAG	1 cut(s)	255
BsaBI	GATNNNNATC	1 cut(s)	485
BsaHI	GRCGYC	1 cut(s)	20
BsaJI	CCNNGG	3 cut(s)	129, 154, 1060
BsaWI	WCCGGW	1 cut(s)	277
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 160, 259, 284, 739, 970, 1101
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	1 cut(s)	580
Bse3DI	GCAATG	1 cut(s)	612
Bse8I	GATNNNNATC	1 cut(s)	485
BseAI	TCCGGA	1 cut(s)	277
BseBI	CCWGG	3 cut(s)	59, 213, 1062
BseDI	CCNNGG	3 cut(s)	129, 154, 1060
BseGI	GGATG	5 cut(s)	249, 649, 676, 785, 854
BseJI	GATNNNNATC	1 cut(s)	485
BseLI	CCNNNNNNNGG	7 cut(s)	64, 160, 259, 284, 739, 970, 1101
BseMI	GCAATG	1 cut(s)	612
BseMII	CTCAG	6 cut(s)	102, 459, 461, 670, 969, 1059
BseNI	ACTGG	1 cut(s)	580
BseRI	GAGGAG	1 cut(s)	130
BseXI	GCAGC	4 cut(s)	382, 453, 586, 673
BseYI	CCCAGC	1 cut(s)	14
Bsh1236I	CGCG	1 cut(s)	1140
BshFI	GGCC	2 cut(s)	230, 288
BshNI	GGYRCC	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	1156
BsiSI	CCGG	2 cut(s)	278, 561
BslFI	GGGAC	1 cut(s)	866
BslI	CCNNNNNNNGG	7 cut(s)	64, 160, 259, 284, 739, 970, 1101
BsmAI	GTCTC	1 cut(s)	1102
BsmFI	GGGAC	1 cut(s)	866
BsnI	GGCC	2 cut(s)	230, 288
Bsp119I	TTCGAA	1 cut(s)	986
Bsp1286I	GDGCHC	2 cut(s)	190, 1156
Bsp13I	TCCGGA	1 cut(s)	277
Bsp143I	GATC	5 cut(s)	28, 218, 822, 952, 993
Bsp1720I	GCTNAGC	2 cut(s)	470, 1215
Bsp19I	CCATGG	1 cut(s)	129
BspACI	CCGC	1 cut(s)	618
BspANI	GGCC	2 cut(s)	230, 288
BspCNI	CTCAG	6 cut(s)	103, 458, 462, 669, 970, 1058
BspEI	TCCGGA	1 cut(s)	277
BspFNI	CGCG	1 cut(s)	1140
BspLI	GGNNCC	6 cut(s)	21, 199, 220, 289, 653, 975
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	1 cut(s)	695
BspPI	GGATC	3 cut(s)	213, 226, 817
BspT104I	TTCGAA	1 cut(s)	986
BspT107I	GGYRCC	1 cut(s)	19
BspTI	CTTAAG	1 cut(s)	257
BsrBI	CCGCTC	1 cut(s)	620
BsrDI	GCAATG	1 cut(s)	612
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	1 cut(s)	580
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	3 cut(s)	129, 154, 1060
BssMI	GATC	5 cut(s)	28, 218, 822, 952, 993
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	129, 154
Bst2UI	CCWGG	3 cut(s)	59, 213, 1062
Bst4CI	ACNGT	4 cut(s)	284, 589, 950, 1008
Bst6I	CTCTTC	1 cut(s)	174
BstACI	GRCGYC	1 cut(s)	20
BstAFI	CTTAAG	1 cut(s)	257
BstBI	TTCGAA	1 cut(s)	986
BstC8I	GCNNGC	4 cut(s)	597, 774, 933, 1116
BstDEI	CTNAG	7 cut(s)	111, 445, 470, 656, 978, 1045, 1215
BstDSI	CCRYGG	1 cut(s)	129
BstENI	CCTNNNNNAGG	3 cut(s)	62, 257, 1099
BstF5I	GGATG	5 cut(s)	249, 649, 676, 785, 854
BstFNI	CGCG	1 cut(s)	1140
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	1 cut(s)	22
BstKTI	GATC	5 cut(s)	31, 221, 825, 955, 996
BstMAI	GTCTC	1 cut(s)	1102
BstMBI	GATC	5 cut(s)	28, 218, 822, 952, 993
BstMWI	GCNNNNNNNGC	2 cut(s)	782, 1079
BstNI	CCWGG	3 cut(s)	59, 213, 1062
BstNSI	RCATGY	1 cut(s)	370
BstSCI	CCNGG	3 cut(s)	57, 211, 1060
BstSFI	CTRYAG	2 cut(s)	492, 1096
BstUI	CGCG	1 cut(s)	1140
BstV1I	GCAGC	4 cut(s)	382, 453, 586, 673
BstV2I	GAAGAC	2 cut(s)	137, 252
BstX2I	RGATCY	1 cut(s)	218
BstYI	RGATCY	1 cut(s)	218
BsuRI	GGCC	2 cut(s)	230, 288
BtgI	CCRYGG	1 cut(s)	129
BtsCI	GGATG	5 cut(s)	249, 649, 676, 785, 854
BtsI	GCAGTG	1 cut(s)	489
BtsIMutI	CAGTG	5 cut(s)	108, 289, 489, 664, 1194
BveI	ACCTGC	1 cut(s)	695
Cac8I	GCNNGC	4 cut(s)	597, 774, 933, 1116
CfoI	GCGC	1 cut(s)	22
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	5 cut(s)	197, 287, 585, 973, 1126
Csp6I	GTAC	4 cut(s)	238, 573, 590, 1056
CspCI	CAANNNNNGTGG	2 cut(s)	688, 723
CviAII	CATG	4 cut(s)	130, 367, 565, 814
CviQI	GTAC	4 cut(s)	238, 573, 590, 1056
DdeI	CTNAG	7 cut(s)	111, 445, 470, 656, 978, 1045, 1215
DinI	GGCGCC	1 cut(s)	21
DpnI	GATC	5 cut(s)	30, 220, 824, 954, 995
DpnII	GATC	5 cut(s)	28, 218, 822, 952, 993
Eam1104I	CTCTTC	1 cut(s)	174
EarI	CTCTTC	1 cut(s)	174
Eco130I	CCWWGG	2 cut(s)	129, 154
Eco147I	AGGCCT	1 cut(s)	230
Eco24I	GRGCYC	1 cut(s)	190
Eco32I	GATATC	1 cut(s)	721
Eco47I	GGWCC	4 cut(s)	197, 585, 973, 1126
EcoNI	CCTNNNNNAGG	3 cut(s)	62, 257, 1099
EcoRII	CCWGG	3 cut(s)	57, 211, 1060
EcoRV	GATATC	1 cut(s)	721
EcoT14I	CCWWGG	2 cut(s)	129, 154
EcoT22I	ATGCAT	1 cut(s)	787
EcoT38I	GRGCYC	1 cut(s)	190
EgeI	GGCGCC	1 cut(s)	21
EheI	GGCGCC	1 cut(s)	21
ErhI	CCWWGG	2 cut(s)	129, 154
FaeI	CATG	4 cut(s)	133, 370, 568, 817
FalI	AAGNNNNNCTT	2 cut(s)	237, 269
FaqI	GGGAC	1 cut(s)	866
FatI	CATG	4 cut(s)	129, 366, 564, 813
FauNDI	CATATG	1 cut(s)	1162
FbaI	TGATCA	1 cut(s)	28
FblI	GTMKAC	1 cut(s)	54
Fnu4HI	GCNGC	5 cut(s)	371, 467, 600, 618, 687
FokI	GGATG	5 cut(s)	236, 656, 683, 772, 861
FriOI	GRGCYC	1 cut(s)	190
Fsp4HI	GCNGC	5 cut(s)	371, 467, 600, 618, 687
FspBI	CTAG	2 cut(s)	876, 1074
GlaI	GCGC	1 cut(s)	21
GluI	GCNGC	5 cut(s)	371, 467, 600, 618, 687
GsaI	CCCAGC	1 cut(s)	18
GsuI	CTGGAG	2 cut(s)	80, 234
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	2 cut(s)	230, 288
HapII	CCGG	2 cut(s)	278, 561
HhaI	GCGC	1 cut(s)	22
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	4 cut(s)	133, 370, 568, 817
Hin6I	GCGC	1 cut(s)	20
HinP1I	GCGC	1 cut(s)	20
HinfI	GANTC	4 cut(s)	43, 340, 507, 632
HpaII	CCGG	2 cut(s)	278, 561
HphI	GGTGA	3 cut(s)	80, 374, 728
Hpy166II	GTNNAC	3 cut(s)	55, 541, 973
Hpy188I	TCNGA	2 cut(s)	33, 448
Hpy188III	TCNNGA	4 cut(s)	278, 478, 724, 1207
Hpy8I	GTNNAC	3 cut(s)	55, 541, 973
HpyCH4III	ACNGT	4 cut(s)	284, 589, 950, 1008
HpyCH4IV	ACGT	1 cut(s)	303
HpyCH4V	TGCA	9 cut(s)	75, 370, 494, 647, 785, 798, 806, 830, 897
HpyF10VI	GCNNNNNNNGC	2 cut(s)	782, 1079
HpyF3I	CTNAG	7 cut(s)	111, 445, 470, 656, 978, 1045, 1215
HpySE526I	ACGT	1 cut(s)	303
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	4 cut(s)	133, 370, 568, 817
HspAI	GCGC	1 cut(s)	20
KasI	GGCGCC	1 cut(s)	19
Kpn2I	TCCGGA	1 cut(s)	277
Ksp22I	TGATCA	1 cut(s)	28
Kzo9I	GATC	5 cut(s)	28, 218, 822, 952, 993
LmnI	GCTCC	1 cut(s)	625
Lsp1109I	GCAGC	4 cut(s)	382, 453, 586, 673
LweI	GCATC	5 cut(s)	198, 634, 794, 906, 1059
MaeI	CTAG	2 cut(s)	876, 1074
MaeII	ACGT	1 cut(s)	303
MaeIII	GTNAC	4 cut(s)	68, 295, 323, 362
MalI	GATC	5 cut(s)	30, 220, 824, 954, 995
MbiI	CCGCTC	1 cut(s)	620
MboI	GATC	5 cut(s)	28, 218, 822, 952, 993
MboII	GAAGA	6 cut(s)	137, 191, 257, 346, 627, 947
MfeI	CAATTG	1 cut(s)	627
MflI	RGATCY	1 cut(s)	218
MhlI	GDGCHC	2 cut(s)	190, 1156
MluCI	AATT	6 cut(s)	137, 351, 627, 817, 869, 924
Mly113I	GGCGCC	1 cut(s)	20
MlyI	GAGTC	1 cut(s)	37
Mph1103I	ATGCAT	1 cut(s)	787
MroI	TCCGGA	1 cut(s)	277
MseI	TTAA	5 cut(s)	258, 399, 665, 927, 1231
MslI	CAYNNNNRTG	1 cut(s)	1161
MspA1I	CMGCKG	1 cut(s)	373
MspCI	CTTAAG	1 cut(s)	257
MspI	CCGG	2 cut(s)	278, 561
MspR9I	CCNGG	3 cut(s)	59, 213, 1062
MunI	CAATTG	1 cut(s)	627
MvaI	CCWGG	3 cut(s)	59, 213, 1062
MvnI	CGCG	1 cut(s)	1140
MwoI	GCNNNNNNNGC	2 cut(s)	782, 1079
NarI	GGCGCC	1 cut(s)	20
NcoI	CCATGG	1 cut(s)	129
NdeI	CATATG	1 cut(s)	1162
NdeII	GATC	5 cut(s)	28, 218, 822, 952, 993
NlaIII	CATG	4 cut(s)	133, 370, 568, 817
NlaIV	GGNNCC	6 cut(s)	21, 199, 220, 289, 653, 975
NmuCI	GTSAC	3 cut(s)	68, 295, 362
NsiI	ATGCAT	1 cut(s)	787
NspI	RCATGY	1 cut(s)	370
NspV	TTCGAA	1 cut(s)	986
PaqCI	CACCTGC	1 cut(s)	695
PceI	AGGCCT	1 cut(s)	230
PfeI	GAWTC	3 cut(s)	340, 507, 632
PflMI	CCANNNNNTGG	1 cut(s)	739
PkrI	GCNGC	5 cut(s)	372, 468, 601, 619, 688
PleI	GAGTC	1 cut(s)	37
PluTI	GGCGCC	1 cut(s)	23
PpsI	GAGTC	1 cut(s)	37
Psp6I	CCWGG	3 cut(s)	57, 211, 1060
PspFI	CCCAGC	1 cut(s)	14
PspGI	CCWGG	3 cut(s)	57, 211, 1060
PspN4I	GGNNCC	6 cut(s)	21, 199, 220, 289, 653, 975
PspPI	GGNCC	5 cut(s)	197, 287, 585, 973, 1126
PstI	CTGCAG	1 cut(s)	496
PsuI	RGATCY	1 cut(s)	218
PvuII	CAGCTG	1 cut(s)	373
RsaI	GTAC	4 cut(s)	239, 574, 591, 1057
RsaNI	GTAC	4 cut(s)	238, 573, 590, 1056
RseI	CAYNNNNRTG	1 cut(s)	1161
SaqAI	TTAA	5 cut(s)	258, 399, 665, 927, 1231
SatI	GCNGC	5 cut(s)	371, 467, 600, 618, 687
Sau3AI	GATC	5 cut(s)	28, 218, 822, 952, 993
Sau96I	GGNCC	5 cut(s)	197, 287, 585, 973, 1126
SchI	GAGTC	1 cut(s)	37
ScrFI	CCNGG	3 cut(s)	59, 213, 1062
SduI	GDGCHC	2 cut(s)	190, 1156
SfaNI	GCATC	5 cut(s)	198, 634, 794, 906, 1059
SfcI	CTRYAG	2 cut(s)	492, 1096
SfoI	GGCGCC	1 cut(s)	21
SfuI	TTCGAA	1 cut(s)	986
SinI	GGWCC	4 cut(s)	197, 585, 973, 1126
SmiMI	CAYNNNNRTG	1 cut(s)	1161
SmlI	CTYRAG	2 cut(s)	257, 270
SmoI	CTYRAG	2 cut(s)	257, 270
Sse9I	AATT	6 cut(s)	137, 351, 627, 817, 869, 924
SseBI	AGGCCT	1 cut(s)	230
SsiI	CCGC	1 cut(s)	618
SspDI	GGCGCC	1 cut(s)	19
SspMI	CTAG	2 cut(s)	876, 1074
StuI	AGGCCT	1 cut(s)	230
StyD4I	CCNGG	3 cut(s)	57, 211, 1060
StyI	CCWWGG	2 cut(s)	129, 154
TaaI	ACNGT	4 cut(s)	284, 589, 950, 1008
TaiI	ACGT	1 cut(s)	306
TaqI	TCGA	3 cut(s)	190, 904, 986
TasI	AATT	6 cut(s)	137, 351, 627, 817, 869, 924
TatI	WGTACW	1 cut(s)	237
TauI	GCSGC	1 cut(s)	620
TfiI	GAWTC	3 cut(s)	340, 507, 632
Tru1I	TTAA	5 cut(s)	258, 399, 665, 927, 1231
Tru9I	TTAA	5 cut(s)	258, 399, 665, 927, 1231
TscAI	CASTG	5 cut(s)	115, 289, 496, 664, 1201
TseFI	GTSAC	3 cut(s)	68, 295, 362
TseI	GCWGC	4 cut(s)	370, 466, 599, 686
Tsp45I	GTSAC	3 cut(s)	68, 295, 362
TspDTI	ATGAA	4 cut(s)	332, 581, 830, 1179
TspGWI	ACGGA	2 cut(s)	40, 815
TspRI	CASTG	5 cut(s)	115, 289, 496, 664, 1201
Van91I	CCANNNNNTGG	1 cut(s)	739
Vha464I	CTTAAG	1 cut(s)	257
VpaK11BI	GGWCC	4 cut(s)	197, 585, 973, 1126
XagI	CCTNNNNNAGG	3 cut(s)	62, 257, 1099
XapI	RAATTY	1 cut(s)	817
XceI	RCATGY	1 cut(s)	370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	136
XmiI	GTMKAC	1 cut(s)	54
XspI	CTAG	2 cut(s)	876, 1074
Zsp2I	ATGCAT	1 cut(s)	787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.