Rorug02G0506700

Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
63817833 .. 63824749
6917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0506700.1

Sequence Viewer

Length: 3936 bp
ATGTTCTCTCCCGGAACCAAGCGGCCCAACGCCAACCCTCGCCGCGACCAAGGCTCTCCGGCCACTCCTCTCACCGAGATCCGGCGATCCTCTCCGGACAATTCTGTCCCCAATCACCCCACCACCGGCACTCCGGCTCCCTGGGCTCCTCGCCTTTCCGTCCTCGCCAGGGTTCTACCGGGTAATCAAAACGAAAAAGGCGATGAAATTAAGCCTGTATATGTTGGAGAGTTTCCGCAAGTTGTTCGTGATGAACAGGCTAGTATGCTCCAGAGGCATGTTCATGGCGATGCCTCGGTATCGGGTGGAATGGAGAGAGGGACATCATTGGCGTGGATTATATGCGGAGGCAGACTCTTTGTGTGGAGTTATTTGTCTCCTGGTTCGTCGACGAGTTGCACTGTTCTTGAGATCCCTGGAAGCGTTTTCGAAGGTGGGGAGGCTGGGAGGACCGGTGGGAACTCGTGGTTGCTCCGCGTGGTTAATTGGGATAACACGTCTACGAGAACAAAGAAAGTTGTGAAACAATGTAGCTCTGCTGGTATTGTACTGTGTAACAAAAAGACCCGCGCTGCTGTGTATTGGCCTGACATATACGGTGAAGGGAGAACTGATCCGGTTGTTAGTGTTGCATCTTCTGATGAATTGGAGGTGGCGTCCTCACCCATTGATAGGAAGACTCCCCAAAGGAGGCAGCAGTTACTTAGCAGGCACAGGAGTAGTTTGACTGGATCTTGTACTTTTAACTCTCTGATTGCGTGTGCAGTCCCTGATTCCCGTAATGAGTGTGTTGCAGTTGCCTGTAGTTCAAATGGTGAGCTATGGCAGTTTCATTGTTGCCCATCTGGTGTTAGCCGTAAGAAAGTCTATCAACACAATCAGACTTCATCCCCCCAAGGGGGTGACAGTGGCAGCAAAGGCTATCCAAGGTCACTGACCTGGTGCTTTCCAAATCTTCATGTGCAGGAATCCAGCCGGCAATTTGTTGTTCTGACAGATCGTGAGATGCAATGTTTTACCATTGAACTTTCTCCTGATTATGTTGTGTCAAAGCTCTGGTCTCATGAGATTATTGGCTCAGATGGTGATCGGGGTATCAAGAAGGATTTGGCCGGGCAGAAGCGAATATGGCCTCTTGACATGCAGGTAGACTATCACGGTAAAGTGACTACCATTCTAGTTGCTACCTTCTGCTTGGACCGGGGTAGTAGTTCAAGCTACACGCAGTATTCTCTTTTGAACATGCAGTATAAATCTGGAGGTAGTATAGCACCTACTCAAGAAACAGTTTTAGAGAGAAAAGATCCTATCCAGGTGATCATTCCAAAAGCAAGAGTAGAAGAAGAAGACTTCTTATTCTCCATGAGACTGCGGGTAGGGGGAAAGCCTTCCGGATCAGCAACTATACTTTCTGGTGATGGAACCGCTACAGTATCCCATTATTATAGAACGACTACACGGCTTTATAAATTTGACCTACCTTATGATGCTGGAAAGGTTCTAGATGCTTCAATTCTTCCCTCTACAGATGATGGTGAAGAAGGGGCATGGGTTGTTCTAACTGAGAAGGCAGGAATATGGGCAATACCCGAGAAGGCTGTTATGATTGGTGGAGTTGAACCTCCTGAGCGAAGTTTATCACGTAAAGGTAGCTCAAATGAAGGATCCGCACAAGAAGAGAGAAAGAACCTTACATTTGCAGGGAATCTTGCTCCTAGAAGGGCTAGTTCTGAAGCATGGGATGCTGGAGATAGACAAAGGGTTATGCCTGTAATTGCACGTCAAACTGCCCAAGATGAAGAATCAGAAACTTTACTGAGCCAGCTTTTCCATGATTATCATTTACATGGGCAGGTTGATGCATCACTTGAAAAGCTAAAAATTGCGGGGGCATTTGAAAGGGATAGAGAGACTAATGTTTTTGCACGACTGAGCAAATCAATTGTTGATACCTTAGCTAAACATTGGACAACAACCAGAGGAGCTGAGATTTTGGCAATGGCCGTGGTATCCTCCCAACTCACGGATAAGCAACAGAAGCATACAAAATTTCTGGAGTTTCTTGCTCTATCCAAATGTCATGAGGAGCTATGTTCTAGACAGAGACATTCTTTGCAAATTATCTTGGAACACGGCGAAAAGCTTGCTGGAATGATTCAACTACGGGAATTGCAGAACATCATCAGCCAGAACCGCTCCAGTGGACTCAGCACCTCCCGTTCTAGTCCAGAAAATCAAATATCTGGTGCTCTGTGGGATCTTATTCAATTAGTCGGTGATAGAGCCCGTCGGAATACGGTGCTTCTAATGGACAGGGACAATGCTGAAGTATTCTACAGTAAAGTTTCTGATCTTCAAGAAGTGTTTTCTTGCTTAGACAAGCAGCTGGAGTATGTAATCCCTGCAGAGCAGCCATATGGGATTCAGGTCCAGAGAGCTTGTGAACTCTCAAATGCATGTGTTAGTATTGTCCGTGCAGCCATGCAATACAGAAACACGCATCACTTGTGGTATCCACCACCTGAGTGCTTAACACCCTGGTATTGCCAAGCTGTTGTACGCAATGGGATGTGGCAGGTTGCTTCCTTCATGCTGCAACTGTTAAAAGAAGCATCTCAGATTGATATGTCTGCAAAATCAGATTTATATTCTCATCTAGAACTGCTGGCTGAAGTTCTGCTTGAGGCATATGCTGGTTCTGTCACCGCCAAAGTTGAACTTGGTCACGAACACAAAGGCTTATTAGATGAGTATTGGAATAGAAGGGATGCACTCCTAGACTCACTTTATCACCAAGTCAAAGATTTTGTGGAAGTTGGGCATGAGCAGAATTTGAATGAAGGATCTGATGAGCTCAATGAAGAAATTTTTGGGAAGCTTTCTTCATGTTTGCTTCCCATGGCAAAGCGGCATGAATGCTACAGTACTTTATGGAAAATATGCTGTGACATTAATGATTCTGAACTACTAAAAAATCTGATGCATGACAGCATGGGACCTAATGGAGGGTTCAGTTACTATGTGTTCAAACAACTATATGCGAGGAAACAATTTTCCAAACTTCTCAGGCTTGGGGAAGAGTTTCACGAAGCGCTCTCAATATTTTTAAAGTATCATCCAGATCTTCTGTGGCTTCATGAAGTGTTTCTTCATCAGTTTTCTTCAGCTTCAGACACCCTTCATGAATTAGCTCTTTCTCAAGAAGAAAGCTCAATTTCAGAGCCTGAAGATGGGACTGGTCCTGGGCATCTCACTACATTACCGAAGCTGGCAGATAGAAAGCGTTTTTTGAATCTCTCAAAAATAGCTGCAATTGCAGGTAAGGATGTTGACTGTGAGATCAAAGTGAAGCGCATTGAGGCTGATTTGAAAATCCTAAAAGTGCAGGAAGAAGTAATAGAACTCCTTTCTTCTGATGAAACAAAGCAAAACCTTGACAAGCGGCTACTTCATCCAGAAGATCTTATCAAGCTGTGCCTCGAAGGTGAAAGCGCAGAGCTCTCATTGCGGGCTTTTGATGTTTTCGCATGGACCAGCTCCTCCTTTCGTAGGACCCATGCAAACCTCTTGGACGATTGCTGGAGAAATGCCGCTGATCAAGATGATTGGAGTAAAATGTACCAAGCATCGGTATCTGAAGGGTGGAGTGATGAGGAAACCTTGCAGAACCTGAAAGAGACGGTACTTTTTCAGGCTTCAAGTAGATGTTACGGACCTGAAGCTGAGACTTTCGGAGAAGGGTTTGATGAAGTGCTCCCACTGAGACAAGAAATTGTGGAGCCTTCAACCATGAAAGATTCAGTTTCTTCTGTAGAGGCCATACTTATGCAGCACAAGGACTACTCGGAGGCTGGGAAGCTGATGCTCACTGCAATCATGCTAGGTAGTTTACAGTATGACACCATAGAGGAGGAGGGTCCTGTTTCTATGGAATGA

Protein Analysis

1311

Amino Acids

146.54

Weight (kDa)

5.61

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoporin_N PF08801 74 - 527 3e-33 Nup133 N terminal like
Nucleoporin_C PF03177 1004 - 1156 3.4e-10 Non-repetitive/WGA-negative nucleoporin C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1467
AasI GACNNNNNNGTC 1 cut(s) 104
Acc36I ACCTGC 4 cut(s) 1135, 1843, 2566, 3308
AccBSI CCGCTC 1 cut(s) 2196
AccI GTMKAC 3 cut(s) 389, 500, 1149
AccII CGCG 3 cut(s) 45, 477, 570
AccIII TCCGGA 2 cut(s) 94, 1391
AcoI YGGCCR 3 cut(s) 60, 1110, 2001
AcsI RAATTY 4 cut(s) 1469, 2048, 2830, 2865
AcuI CTGAAG 8 cut(s) 1752, 2346, 2691, 3147, 3153, 3246, 3657, 3738
AcyI GRCGYC 1 cut(s) 656
AfaI GTAC 6 cut(s) 549, 739, 2559, 2926, 3620, 3684
AfeI AGCGCT 1 cut(s) 3093
AflIII ACRYGT 1 cut(s) 495
AgeI ACCGGT 1 cut(s) 452
AjiI CACGTC 2 cut(s) 498, 1781
AjnI CCWGG 8 cut(s) 140, 167, 379, 415, 938, 1311, 2537, 3241
AjuI GAANNNNNNNTTGG 2 cut(s) 2853, 2885
AleI CACNNNNGTG 1 cut(s) 2524
Alw21I GWGCWC 4 cut(s) 2251, 2856, 3501, 3756
Alw26I GTCTC 8 cut(s) 381, 1065, 1360, 1904, 2098, 3671, 3719, 3757
AlwNI CAGNNNCTG 3 cut(s) 770, 3224, 3670
Ama87I CYCGRG 1 cut(s) 1589
Aor13HI TCCGGA 2 cut(s) 94, 1391
Aor51HI AGCGCT 1 cut(s) 3093
AoxI GGCC 7 cut(s) 23, 60, 584, 1110, 1130, 2001, 3816
ApeKI GCWGC 9 cut(s) 572, 694, 912, 2383, 2410, 2477, 2593, 3308, 3829
ApoI RAATTY 4 cut(s) 1469, 2048, 2830, 2865
ArsI GACNNNNNNTTYG 2 cut(s) 1043, 1075
AseI ATTAAT 1 cut(s) 2952
AsiGI ACCGGT 1 cut(s) 452
Asp700I GAANNNNTTC 3 cut(s) 1387, 3081, 3144
AspLEI GCGC 4 cut(s) 572, 3094, 3354, 3494
AsuC2I CCSGG 4 cut(s) 12, 180, 1114, 1202
AsuII TTCGAA 1 cut(s) 429
AvaI CYCGRG 1 cut(s) 1589
AvaII GGWCC 9 cut(s) 450, 1198, 2428, 2996, 3239, 3531, 3552, 3713, 3917
BamHI GGATCC 1 cut(s) 1664
BanII GRGCYC 4 cut(s) 148, 2287, 2856, 3501
BauI CACGAG 1 cut(s) 463
BbsI GAAGAC 2 cut(s) 683, 1353
Bbv12I GWGCWC 4 cut(s) 2251, 2856, 3501, 3756
BbvI GCAGC 9 cut(s) 559, 706, 924, 2395, 2422, 2489, 2580, 3295, 3841
BccI CCATC 5 cut(s) 850, 1076, 1412, 1526, 3224
BceAI ACGGC 4 cut(s) 840, 1475, 1988, 2149
BcgI CGANNNNNNTGC 4 cut(s) 227, 261, 2126, 2160
BciT130I CCWGG 8 cut(s) 142, 169, 381, 417, 940, 1313, 2539, 3243
BciVI GTATCC 3 cut(s) 1444, 2020, 2523
BclI TGATCA 2 cut(s) 1317, 3595
BcnI CCSGG 4 cut(s) 12, 180, 1114, 1202
BcoDI GTCTC 8 cut(s) 381, 1065, 1360, 1904, 2098, 3671, 3719, 3757
BfmI CTRYAG 7 cut(s) 802, 1428, 1524, 2335, 2403, 2920, 3810
BfoI RGCGCY 1 cut(s) 3095
BfuAI ACCTGC 4 cut(s) 1135, 1843, 2566, 3308
BfuI GTATCC 3 cut(s) 1444, 2020, 2523
BglII AGATCT 2 cut(s) 3121, 3460
BmcAI AGTACT 1 cut(s) 2926
Bme18I GGWCC 9 cut(s) 450, 1198, 2428, 2996, 3239, 3531, 3552, 3713, 3917
BmeT110I CYCGRG 1 cut(s) 1589
BmgBI CACGTC 2 cut(s) 498, 1781
BmiI GGNNCC 9 cut(s) 16, 138, 147, 1423, 1666, 2997, 3554, 3780, 3918
BpiI GAAGAC 2 cut(s) 683, 1353
BplI GAGNNNNNCTC 2 cut(s) 339, 371
BpmI CTGGAG 7 cut(s) 254, 1278, 1767, 2075, 2182, 2408, 3601
Bpu10I CCTNAGC 2 cut(s) 1626, 1954
Bpu14I TTCGAA 1 cut(s) 429
BpuEI CTTGAG 4 cut(s) 428, 1263, 2702, 3183
BpuMI CCSGG 4 cut(s) 12, 180, 1114, 1202
BsaAI YACGTR 1 cut(s) 1643
BsaBI GATNNNNATC 1 cut(s) 1086
BsaHI GRCGYC 1 cut(s) 656
BsaI GGTCTC 1 cut(s) 1065
BsaWI WCCGGW 4 cut(s) 94, 452, 616, 1391
BsaXI ACNNNNNCTCC 8 cut(s) 115, 121, 145, 151, 439, 469, 641, 671
Bse118I RCCGGY 3 cut(s) 125, 452, 975
Bse1I ACTGG 3 cut(s) 733, 2199, 3241
Bse3DI GCAATG 4 cut(s) 1016, 2004, 2569, 3503
Bse8I GATNNNNATC 1 cut(s) 1086
BseAI TCCGGA 2 cut(s) 94, 1391
BseBI CCWGG 8 cut(s) 142, 169, 381, 417, 940, 1313, 2539, 3243
BseGI GGATG 7 cut(s) 887, 1747, 2574, 2773, 3115, 3331, 3451
BseJI GATNNNNATC 1 cut(s) 1086
BseMI GCAATG 4 cut(s) 1016, 2004, 2569, 3503
BseNI ACTGG 3 cut(s) 733, 2199, 3241
BseRI GAGGAG 7 cut(s) 57, 138, 1995, 2099, 3529, 3923, 3926
BseXI GCAGC 9 cut(s) 559, 706, 924, 2395, 2422, 2489, 2580, 3295, 3841
BseYI CCCAGC 2 cut(s) 443, 3851
BsgI GTGCAG 4 cut(s) 783, 983, 2496, 3404
Bsh1236I CGCG 3 cut(s) 45, 477, 570
BshFI GGCC 7 cut(s) 25, 62, 586, 1112, 1132, 2003, 3818
BshTI ACCGGT 1 cut(s) 452
BsiHKAI GWGCWC 4 cut(s) 2251, 2856, 3501, 3756
BsiHKCI CYCGRG 1 cut(s) 1589
BslFI GGGAC 6 cut(s) 92, 334, 752, 2330, 3009, 3247
BsmAI GTCTC 8 cut(s) 381, 1065, 1360, 1904, 2098, 3671, 3719, 3757
BsmBI CGTCTC 1 cut(s) 3671
BsmFI GGGAC 6 cut(s) 92, 334, 752, 2330, 3009, 3247
BsmI GAATGC 1 cut(s) 2921
BsnI GGCC 7 cut(s) 25, 62, 586, 1112, 1132, 2003, 3818
Bso31I GGTCTC 1 cut(s) 1065
BsoBI CYCGRG 1 cut(s) 1589
Bsp119I TTCGAA 1 cut(s) 429
Bsp1286I GDGCHC 6 cut(s) 148, 2251, 2287, 2856, 3501, 3756
Bsp13I TCCGGA 2 cut(s) 94, 1391
Bsp19I CCATGG 1 cut(s) 2898
BspANI GGCC 7 cut(s) 25, 62, 586, 1112, 1132, 2003, 3818
BspEI TCCGGA 2 cut(s) 94, 1391
BspFNI CGCG 3 cut(s) 45, 477, 570
BspHI TCATGA 4 cut(s) 1063, 2080, 3136, 3181
BspLI GGNNCC 9 cut(s) 16, 138, 147, 1423, 1666, 2997, 3554, 3780, 3918
BspMAI CTGCAG 1 cut(s) 2407
BspMI ACCTGC 4 cut(s) 1135, 1843, 2566, 3308
BspT104I TTCGAA 1 cut(s) 429
BspTNI GGTCTC 1 cut(s) 1065
BsrBI CCGCTC 1 cut(s) 2196
BsrDI GCAATG 4 cut(s) 1016, 2004, 2569, 3503
BsrFI RCCGGY 3 cut(s) 125, 452, 975
BsrI ACTGG 3 cut(s) 733, 2199, 3241
BssAI RCCGGY 3 cut(s) 125, 452, 975
BssNI GRCGYC 1 cut(s) 656
BssSI CACGAG 1 cut(s) 463
BssT1I CCWWGG 4 cut(s) 49, 895, 926, 2898
Bst2BI CACGAG 1 cut(s) 463
Bst2UI CCWGG 8 cut(s) 142, 169, 381, 417, 940, 1313, 2539, 3243
Bst6I CTCTTC 2 cut(s) 1671, 3072
BstACI GRCGYC 1 cut(s) 656
BstAPI GCANNNNNTGC 1 cut(s) 1742
BstBAI YACGTR 1 cut(s) 1643
BstBI TTCGAA 1 cut(s) 429
BstC8I GCNNGC 7 cut(s) 710, 977, 1823, 2145, 2667, 3270, 3510
BstDSI CCRYGG 2 cut(s) 2004, 2898
BstENI CCTNNNNNAGG 2 cut(s) 3003, 3547
BstF5I GGATG 7 cut(s) 887, 1747, 2574, 2773, 3115, 3331, 3451
BstFNI CGCG 3 cut(s) 45, 477, 570
BstH2I RGCGCY 1 cut(s) 3095
BstHHI GCGC 4 cut(s) 572, 3094, 3354, 3494
BstMAI GTCTC 8 cut(s) 381, 1065, 1360, 1904, 2098, 3671, 3719, 3757
BstNI CCWGG 8 cut(s) 142, 169, 381, 417, 940, 1313, 2539, 3243
BstNSI RCATGY 4 cut(s) 281, 1144, 1246, 2460
BstSFI CTRYAG 7 cut(s) 802, 1428, 1524, 2335, 2403, 2920, 3810
BstUI CGCG 3 cut(s) 45, 477, 570
BstV1I GCAGC 9 cut(s) 559, 706, 924, 2395, 2422, 2489, 2580, 3295, 3841
BstV2I GAAGAC 2 cut(s) 683, 1353
BstX2I RGATCY 9 cut(s) 78, 411, 731, 1303, 1664, 2257, 2843, 3121, 3460
BstYI RGATCY 9 cut(s) 78, 411, 731, 1303, 1664, 2257, 2843, 3121, 3460
BsuI GTATCC 3 cut(s) 1444, 2020, 2523
BsuRI GGCC 7 cut(s) 25, 62, 586, 1112, 1132, 2003, 3818
BtgI CCRYGG 2 cut(s) 2004, 2898
BtgZI GCGATG 2 cut(s) 216, 303
BtrI CACGTC 2 cut(s) 498, 1781
BtsCI GGATG 7 cut(s) 887, 1747, 2574, 2773, 3115, 3331, 3451
BtsI GCAGTG 1 cut(s) 3867
BtsIMutI CAGTG 6 cut(s) 399, 913, 932, 2206, 3758, 3867
BveI ACCTGC 4 cut(s) 1135, 1843, 2566, 3308
Cac8I GCNNGC 7 cut(s) 710, 977, 1823, 2145, 2667, 3270, 3510
CaiI CAGNNNCTG 3 cut(s) 770, 3224, 3670
CciI TCATGA 4 cut(s) 1063, 2080, 3136, 3181
CfoI GCGC 4 cut(s) 572, 3094, 3354, 3494
Cfr10I RCCGGY 3 cut(s) 125, 452, 975
CseI GACGC 1 cut(s) 645
CsiI ACCWGGT 1 cut(s) 938
Csp6I GTAC 6 cut(s) 548, 738, 2558, 2925, 3619, 3683
CspAI ACCGGT 1 cut(s) 452
CspCI CAANNNNNGTGG 2 cut(s) 1986, 2021
CviQI GTAC 6 cut(s) 548, 738, 2558, 2925, 3619, 3683
DraI TTTAAA 1 cut(s) 3108
DrdI GACNNNNNNGTC 1 cut(s) 104
DseDI GACNNNNNNGTC 1 cut(s) 104
EaeI YGGCCR 3 cut(s) 60, 1110, 2001
Eam1104I CTCTTC 2 cut(s) 1671, 3072
EarI CTCTTC 2 cut(s) 1671, 3072
Ecl136II GAGCTC 2 cut(s) 2854, 3499
Eco130I CCWWGG 4 cut(s) 49, 895, 926, 2898
Eco24I GRGCYC 4 cut(s) 148, 2287, 2856, 3501
Eco31I GGTCTC 1 cut(s) 1065
Eco47I GGWCC 9 cut(s) 450, 1198, 2428, 2996, 3239, 3531, 3552, 3713, 3917
Eco47III AGCGCT 1 cut(s) 3093
Eco53kI GAGCTC 2 cut(s) 2854, 3499
Eco57I CTGAAG 8 cut(s) 1752, 2346, 2691, 3147, 3153, 3246, 3657, 3738
Eco88I CYCGRG 1 cut(s) 1589
EcoICRI GAGCTC 2 cut(s) 2854, 3499
EcoNI CCTNNNNNAGG 2 cut(s) 3003, 3547
EcoO109I RGGNCCY 3 cut(s) 2996, 3552, 3917
EcoRII CCWGG 8 cut(s) 140, 167, 379, 415, 938, 1311, 2537, 3241
EcoT14I CCWWGG 4 cut(s) 49, 895, 926, 2898
EcoT22I ATGCAT 3 cut(s) 1864, 2458, 2985
EcoT38I GRGCYC 4 cut(s) 148, 2287, 2856, 3501
ErhI CCWWGG 4 cut(s) 49, 895, 926, 2898
Esp3I CGTCTC 1 cut(s) 3671
FalI AAGNNNNNCTT 6 cut(s) 2664, 2696, 2703, 2735, 3132, 3164
FaqI GGGAC 6 cut(s) 92, 334, 752, 2330, 3009, 3247
FauI CCCGC 4 cut(s) 575, 1365, 1879, 3501
FauNDI CATATG 2 cut(s) 2416, 2689
FbaI TGATCA 2 cut(s) 1317, 3595
FblI GTMKAC 3 cut(s) 389, 500, 1149
FokI GGATG 7 cut(s) 874, 1754, 2581, 2780, 3102, 3338, 3438
FriOI GRGCYC 4 cut(s) 148, 2287, 2856, 3501
GlaI GCGC 4 cut(s) 571, 3093, 3353, 3493
GsaI CCCAGC 2 cut(s) 447, 3855
GsuI CTGGAG 7 cut(s) 254, 1278, 1767, 2075, 2182, 2408, 3601
HaeII RGCGCY 1 cut(s) 3095
HaeIII GGCC 7 cut(s) 25, 62, 586, 1112, 1132, 2003, 3818
HgaI GACGC 1 cut(s) 645
HhaI GCGC 4 cut(s) 572, 3094, 3354, 3494
Hin1I GRCGYC 1 cut(s) 656
Hin6I GCGC 4 cut(s) 570, 3092, 3352, 3492
HinP1I GCGC 4 cut(s) 570, 3092, 3352, 3492
HincII GTYRAC 2 cut(s) 390, 3331
HindII GTYRAC 2 cut(s) 390, 3331
HindIII AAGCTT 2 cut(s) 2141, 2876
Hpy166II GTNNAC 7 cut(s) 390, 501, 1150, 2204, 2444, 3331, 3890
Hpy8I GTNNAC 7 cut(s) 390, 501, 1150, 2204, 2444, 3331, 3890
Hpy99I CGWCG 3 cut(s) 391, 394, 2292
HpyCH4IV ACGT 3 cut(s) 497, 1642, 1780
HpySE526I ACGT 3 cut(s) 497, 1642, 1780
Hsp92I GRCGYC 1 cut(s) 656
HspAI GCGC 4 cut(s) 570, 3092, 3352, 3492
Kpn2I TCCGGA 2 cut(s) 94, 1391
KroI GCCGGC 1 cut(s) 975
KroNI GCCGGC 1 cut(s) 977
Ksp22I TGATCA 2 cut(s) 1317, 3595
Lsp1109I GCAGC 9 cut(s) 559, 706, 924, 2395, 2422, 2489, 2580, 3295, 3841
MabI ACCWGGT 1 cut(s) 938
MaeII ACGT 3 cut(s) 497, 1642, 1780
MbiI CCGCTC 1 cut(s) 2196
MfeI CAATTG 2 cut(s) 1941, 3312
MflI RGATCY 9 cut(s) 78, 411, 731, 1303, 1664, 2257, 2843, 3121, 3460
MhlI GDGCHC 6 cut(s) 148, 2251, 2287, 2856, 3501, 3756
MlyI GAGTC 4 cut(s) 348, 673, 2199, 2774
MmeI TCCRAC 2 cut(s) 205, 2270
Mph1103I ATGCAT 3 cut(s) 1864, 2458, 2985
MroI TCCGGA 2 cut(s) 94, 1391
MroNI GCCGGC 1 cut(s) 975
MroXI GAANNNNTTC 3 cut(s) 1387, 3081, 3144
MseI TTAA 7 cut(s) 210, 483, 744, 2531, 2603, 2952, 3107
MslI CAYNNNNRTG 6 cut(s) 282, 288, 331, 1845, 2524, 3824
MspA1I CMGCKG 2 cut(s) 2386, 3593
MunI CAATTG 2 cut(s) 1941, 3312
Mva1269I GAATGC 1 cut(s) 2921
MvaI CCWGG 8 cut(s) 142, 169, 381, 417, 940, 1313, 2539, 3243
MvnI CGCG 3 cut(s) 45, 477, 570
NaeI GCCGGC 1 cut(s) 977
NciI CCSGG 4 cut(s) 12, 180, 1114, 1202
NcoI CCATGG 1 cut(s) 2898
NdeI CATATG 2 cut(s) 2416, 2689
NgoMIV GCCGGC 1 cut(s) 975
NlaIV GGNNCC 9 cut(s) 16, 138, 147, 1423, 1666, 2997, 3554, 3780, 3918
NmuCI GTSAC 6 cut(s) 902, 930, 1165, 2701, 2723, 2945
NsiI ATGCAT 3 cut(s) 1864, 2458, 2985
NspI RCATGY 4 cut(s) 281, 1144, 1246, 2460
NspV TTCGAA 1 cut(s) 429
OliI CACNNNNGTG 1 cut(s) 2524
PagI TCATGA 4 cut(s) 1063, 2080, 3136, 3181
PasI CCCWGGG 1 cut(s) 141
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 2921
PdiI GCCGGC 1 cut(s) 977
PdmI GAANNNNTTC 3 cut(s) 1387, 3081, 3144
PfeI GAWTC 9 cut(s) 773, 968, 1705, 1802, 2155, 2422, 2957, 3292, 3797
PfoI TCCNGGA 1 cut(s) 10
PinAI ACCGGT 1 cut(s) 452
PleI GAGTC 4 cut(s) 348, 673, 2199, 2774
PpsI GAGTC 4 cut(s) 348, 673, 2199, 2774
Ppu21I YACGTR 1 cut(s) 1643
PpuMI RGGWCCY 3 cut(s) 2996, 3552, 3917
PshBI ATTAAT 1 cut(s) 2952
PsiI TTATAA 1 cut(s) 1467
Psp124BI GAGCTC 2 cut(s) 2856, 3501
Psp5II RGGWCCY 3 cut(s) 2996, 3552, 3917
Psp6I CCWGG 8 cut(s) 140, 167, 379, 415, 938, 1311, 2537, 3241
PspFI CCCAGC 2 cut(s) 443, 3851
PspGI CCWGG 8 cut(s) 140, 167, 379, 415, 938, 1311, 2537, 3241
PspN4I GGNNCC 9 cut(s) 16, 138, 147, 1423, 1666, 2997, 3554, 3780, 3918
PspPPI RGGWCCY 3 cut(s) 2996, 3552, 3917
PstI CTGCAG 1 cut(s) 2407
PstNI CAGNNNCTG 3 cut(s) 770, 3224, 3670
PsuI RGATCY 9 cut(s) 78, 411, 731, 1303, 1664, 2257, 2843, 3121, 3460
PvuII CAGCTG 1 cut(s) 2386
RsaI GTAC 6 cut(s) 549, 739, 2559, 2926, 3620, 3684
RsaNI GTAC 6 cut(s) 548, 738, 2558, 2925, 3619, 3683
RseI CAYNNNNRTG 6 cut(s) 282, 288, 331, 1845, 2524, 3824
SacI GAGCTC 2 cut(s) 2856, 3501
SalI GTCGAC 1 cut(s) 388
SaqAI TTAA 7 cut(s) 210, 483, 744, 2531, 2603, 2952, 3107
ScaI AGTACT 1 cut(s) 2926
SchI GAGTC 4 cut(s) 348, 673, 2199, 2774
SduI GDGCHC 6 cut(s) 148, 2251, 2287, 2856, 3501, 3756
SexAI ACCWGGT 1 cut(s) 938
SfcI CTRYAG 7 cut(s) 802, 1428, 1524, 2335, 2403, 2920, 3810
SfuI TTCGAA 1 cut(s) 429
SgrDI CGTCGACG 1 cut(s) 388
SinI GGWCC 9 cut(s) 450, 1198, 2428, 2996, 3239, 3531, 3552, 3713, 3917
SmiMI CAYNNNNRTG 6 cut(s) 282, 288, 331, 1845, 2524, 3824
SmlI CTYRAG 4 cut(s) 407, 1278, 2681, 3198
SmoI CTYRAG 4 cut(s) 407, 1278, 2681, 3198
SspI AATATT 1 cut(s) 3102
SstI GAGCTC 2 cut(s) 2856, 3501
StyI CCWWGG 4 cut(s) 49, 895, 926, 2898
TaiI ACGT 3 cut(s) 500, 1645, 1783
TaqI TCGA 3 cut(s) 389, 429, 3480
TatI WGTACW 3 cut(s) 547, 737, 2924
TauI GCSGC 5 cut(s) 25, 45, 2911, 3445, 3593
TfiI GAWTC 9 cut(s) 773, 968, 1705, 1802, 2155, 2422, 2957, 3292, 3797
Tru1I TTAA 7 cut(s) 210, 483, 744, 2531, 2603, 2952, 3107
Tru9I TTAA 7 cut(s) 210, 483, 744, 2531, 2603, 2952, 3107
TscAI CASTG 6 cut(s) 406, 913, 939, 2206, 3765, 3874
TseFI GTSAC 6 cut(s) 902, 930, 1165, 2701, 2723, 2945
TseI GCWGC 9 cut(s) 572, 694, 912, 2383, 2410, 2477, 2593, 3308, 3829
Tsp45I GTSAC 6 cut(s) 902, 930, 1165, 2701, 2723, 2945
TspGWI ACGGA 4 cut(s) 148, 2039, 2462, 3726
TspRI CASTG 6 cut(s) 406, 913, 939, 2206, 3765, 3874
VpaK11BI GGWCC 9 cut(s) 450, 1198, 2428, 2996, 3239, 3531, 3552, 3713, 3917
VspI ATTAAT 1 cut(s) 2952
XagI CCTNNNNNAGG 2 cut(s) 3003, 3547
XapI RAATTY 4 cut(s) 1469, 2048, 2830, 2865
XbaI TCTAGA 3 cut(s) 1501, 2096, 2656
XceI RCATGY 4 cut(s) 281, 1144, 1246, 2460
XcmI CCANNNNNNNNNTGG 1 cut(s) 3126
XmiI GTMKAC 3 cut(s) 389, 500, 1149
XmnI GAANNNNTTC 3 cut(s) 1387, 3081, 3144
ZrmI AGTACT 1 cut(s) 2926
Zsp2I ATGCAT 3 cut(s) 1864, 2458, 2985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.