No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04985 AT1G04985 |
| fragaria_vesca | FvH4_6g41990 |
| malus_domestica | MD17G1107300.v1.1 |
| prunus_persica | Prupe.3G209000_v2.0.a1 Prupe.3G209000_v2.0.a1 |
| pyrus_communis | pycom09g03990 pycom17g10000 |
| rosa_chinensis | RchiOBHm_Chr2g0157891 |
| rosa_laevigata | RLG00000021034 |
| rosa_multiflora | Rmu_sc0002441.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00091870 |
| rosa_rugosa | Rorug02G0464200 |
| rosa_samantha | Rh2AG529600 Rh2BG544200 Rh2CG513900 Rh2DG552500 |
| rosa_wichuraiana | Rw2G043820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 189 |
| AciI | CCGC | 1 cut(s) | 502 |
| AcuI | CTGAAG | 1 cut(s) | 159 |
| AfaI | GTAC | 1 cut(s) | 207 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 54, 189 |
| AflIII | ACRYGT | 1 cut(s) | 587 |
| AgsI | TTSAA | 3 cut(s) | 116, 254, 277 |
| AluBI | AGCT | 3 cut(s) | 28, 77, 173 |
| AluI | AGCT | 3 cut(s) | 28, 77, 173 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| Alw26I | GTCTC | 1 cut(s) | 45 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 43 |
| ApeKI | GCWGC | 1 cut(s) | 499 |
| BaeGI | GKGCMC | 1 cut(s) | 468 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 213, 246 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 511 |
| BccI | CCATC | 1 cut(s) | 516 |
| BciVI | GTATCC | 1 cut(s) | 498 |
| BclI | TGATCA | 1 cut(s) | 381 |
| BcoDI | GTCTC | 1 cut(s) | 45 |
| BfaI | CTAG | 1 cut(s) | 461 |
| BfmI | CTRYAG | 1 cut(s) | 168 |
| BfuI | GTATCC | 1 cut(s) | 498 |
| BisI | GCNGC | 1 cut(s) | 500 |
| BlsI | GCNGC | 1 cut(s) | 501 |
| BmiI | GGNNCC | 1 cut(s) | 373 |
| Bpu10I | CCTNAGC | 2 cut(s) | 19, 494 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 54, 189 |
| BseGI | GGATG | 2 cut(s) | 130, 527 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 54, 189 |
| BseMII | CTCAG | 3 cut(s) | 33, 50, 71 |
| BseSI | GKGCMC | 1 cut(s) | 468 |
| BseXI | GCAGC | 1 cut(s) | 511 |
| BsgI | GTGCAG | 1 cut(s) | 600 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 54, 189 |
| BsmAI | GTCTC | 1 cut(s) | 45 |
| Bsp1286I | GDGCHC | 2 cut(s) | 79, 468 |
| Bsp143I | GATC | 4 cut(s) | 83, 232, 381, 597 |
| BspACI | CCGC | 1 cut(s) | 502 |
| BspCNI | CTCAG | 3 cut(s) | 32, 49, 72 |
| BspHI | TCATGA | 1 cut(s) | 662 |
| BspLI | GGNNCC | 1 cut(s) | 373 |
| BssMI | GATC | 4 cut(s) | 83, 232, 381, 597 |
| Bst4CI | ACNGT | 4 cut(s) | 157, 205, 262, 271 |
| BstDEI | CTNAG | 5 cut(s) | 11, 19, 36, 80, 494 |
| BstF5I | GGATG | 2 cut(s) | 130, 527 |
| BstKTI | GATC | 4 cut(s) | 86, 235, 384, 600 |
| BstMAI | GTCTC | 1 cut(s) | 45 |
| BstMBI | GATC | 4 cut(s) | 83, 232, 381, 597 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 179, 472, 499 |
| BstSFI | CTRYAG | 1 cut(s) | 168 |
| BstSLI | GKGCMC | 1 cut(s) | 468 |
| BstV1I | GCAGC | 1 cut(s) | 511 |
| BsuI | GTATCC | 1 cut(s) | 498 |
| BtsCI | GGATG | 2 cut(s) | 130, 527 |
| BtsI | GCAGTG | 1 cut(s) | 363 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| CaiI | CAGNNNCTG | 1 cut(s) | 43 |
| CciI | TCATGA | 1 cut(s) | 662 |
| Csp6I | GTAC | 1 cut(s) | 206 |
| CviAII | CATG | 5 cut(s) | 87, 189, 218, 354, 663 |
| CviJI | RGCY | 8 cut(s) | 18, 28, 77, 173, 241, 362, 390, 475 |
| CviKI_1 | RGCY | 8 cut(s) | 18, 28, 77, 173, 241, 362, 390, 475 |
| CviQI | GTAC | 1 cut(s) | 206 |
| DdeI | CTNAG | 5 cut(s) | 11, 19, 36, 80, 494 |
| DpnI | GATC | 4 cut(s) | 85, 234, 383, 599 |
| DpnII | GATC | 4 cut(s) | 83, 232, 381, 597 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 1 cut(s) | 159 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoT22I | ATGCAT | 1 cut(s) | 359 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| FaeI | CATG | 5 cut(s) | 90, 192, 221, 357, 666 |
| FatI | CATG | 5 cut(s) | 86, 188, 217, 353, 662 |
| FbaI | TGATCA | 1 cut(s) | 381 |
| Fnu4HI | GCNGC | 1 cut(s) | 500 |
| FokI | GGATG | 2 cut(s) | 137, 534 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 500 |
| FspBI | CTAG | 1 cut(s) | 461 |
| GluI | GCNGC | 1 cut(s) | 500 |
| Hin1II | CATG | 5 cut(s) | 90, 192, 221, 357, 666 |
| HinfI | GANTC | 4 cut(s) | 136, 245, 305, 631 |
| Hpy166II | GTNNAC | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 4 cut(s) | 81, 237, 310, 440 |
| Hpy188III | TCNNGA | 3 cut(s) | 101, 333, 663 |
| Hpy8I | GTNNAC | 1 cut(s) | 153 |
| HpyAV | CCTTC | 1 cut(s) | 408 |
| HpyCH4III | ACNGT | 4 cut(s) | 157, 205, 262, 271 |
| HpyCH4IV | ACGT | 2 cut(s) | 468, 587 |
| HpyCH4V | TGCA | 4 cut(s) | 357, 425, 578, 617 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 179, 472, 499 |
| HpyF3I | CTNAG | 5 cut(s) | 11, 19, 36, 80, 494 |
| HpySE526I | ACGT | 2 cut(s) | 468, 587 |
| Hsp92II | CATG | 5 cut(s) | 90, 192, 221, 357, 666 |
| Ksp22I | TGATCA | 1 cut(s) | 381 |
| Kzo9I | GATC | 4 cut(s) | 83, 232, 381, 597 |
| LmnI | GCTCC | 1 cut(s) | 445 |
| LpnPI | CCDG | 6 cut(s) | 6, 86, 318, 354, 582, 648 |
| Lsp1109I | GCAGC | 1 cut(s) | 511 |
| MaeI | CTAG | 1 cut(s) | 461 |
| MaeII | ACGT | 2 cut(s) | 468, 587 |
| MalI | GATC | 4 cut(s) | 85, 234, 383, 599 |
| MboI | GATC | 4 cut(s) | 83, 232, 381, 597 |
| MboII | GAAGA | 2 cut(s) | 289, 342 |
| MfeI | CAATTG | 1 cut(s) | 488 |
| MhlI | GDGCHC | 2 cut(s) | 79, 468 |
| MluCI | AATT | 5 cut(s) | 50, 488, 527, 533, 622 |
| MlyI | GAGTC | 2 cut(s) | 145, 254 |
| MmeI | TCCRAC | 1 cut(s) | 139 |
| MnlI | CCTC | 4 cut(s) | 8, 60, 231, 401 |
| Mph1103I | ATGCAT | 1 cut(s) | 359 |
| MseI | TTAA | 5 cut(s) | 53, 300, 471, 540, 639 |
| MslI | CAYNNNNRTG | 1 cut(s) | 216 |
| MspA1I | CMGCKG | 1 cut(s) | 502 |
| MunI | CAATTG | 1 cut(s) | 488 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 179, 472, 499 |
| NdeII | GATC | 4 cut(s) | 83, 232, 381, 597 |
| NlaIII | CATG | 5 cut(s) | 90, 192, 221, 357, 666 |
| NlaIV | GGNNCC | 1 cut(s) | 373 |
| NsiI | ATGCAT | 1 cut(s) | 359 |
| PagI | TCATGA | 1 cut(s) | 662 |
| PfeI | GAWTC | 2 cut(s) | 305, 631 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 189 |
| PkrI | GCNGC | 1 cut(s) | 501 |
| PleI | GAGTC | 2 cut(s) | 144, 253 |
| PpsI | GAGTC | 2 cut(s) | 144, 253 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 1 cut(s) | 373 |
| PstNI | CAGNNNCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 207 |
| RsaNI | GTAC | 1 cut(s) | 206 |
| RseI | CAYNNNNRTG | 1 cut(s) | 216 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| SaqAI | TTAA | 5 cut(s) | 53, 300, 471, 540, 639 |
| SatI | GCNGC | 1 cut(s) | 500 |
| Sau3AI | GATC | 4 cut(s) | 83, 232, 381, 597 |
| SchI | GAGTC | 2 cut(s) | 145, 254 |
| SduI | GDGCHC | 2 cut(s) | 79, 468 |
| SfcI | CTRYAG | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 1 cut(s) | 242 |
| SmoI | CTYRAG | 1 cut(s) | 242 |
| Sse9I | AATT | 5 cut(s) | 50, 488, 527, 533, 622 |
| SsiI | CCGC | 1 cut(s) | 502 |
| SspMI | CTAG | 1 cut(s) | 461 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| TaaI | ACNGT | 4 cut(s) | 157, 205, 262, 271 |
| TaiI | ACGT | 2 cut(s) | 471, 590 |
| TaqI | TCGA | 1 cut(s) | 248 |
| TasI | AATT | 5 cut(s) | 50, 488, 527, 533, 622 |
| TfiI | GAWTC | 2 cut(s) | 305, 631 |
| Tru1I | TTAA | 5 cut(s) | 53, 300, 471, 540, 639 |
| Tru9I | TTAA | 5 cut(s) | 53, 300, 471, 540, 639 |
| TscAI | CASTG | 1 cut(s) | 370 |
| TseI | GCWGC | 1 cut(s) | 499 |
| TspDTI | ATGAA | 3 cut(s) | 17, 342, 467 |
| TspRI | CASTG | 1 cut(s) | 370 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 189 |
| XspI | CTAG | 1 cut(s) | 461 |
| Zsp2I | ATGCAT | 1 cut(s) | 359 |