Rroxscaffold_2G00114310

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
40250844 .. 40268814
17971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00114310.1

Sequence Viewer

Length: 2388 bp
ATGGAGGATACACGAGACGATGCTGGGCCAGCAGAGCAAGGGCCTTCAAATGCTTCATGGTGGCCATCAGATTTTGTGGAAAGATTTGGGTCTGCTTCTTTGGGCTCTCAAGAAGAGACCTTGAGTAACACGGATTCTCCTAGAAGCTTGGATCAAGATGTGTTTTCATCTCAGAAAGCATCACAAGTTCTATGGCAAACAGGAATGCTTTTTGAACTAATTCCCAATGGATTCTACTCTGTCATTCCGGAGAAAAGGCTCAAGGAGGGTTTTGATGATATTCCTACTCTTGATGAGCTTCATGCTTTGGAGGCAGAGGGTTTGAAAGCCGATATTATTCTTGTAGATACTGCAAAAGACAAAAAGCTGTCCATGCTGAAGCAACTGATTGTAGCACTAGTGAAAGGATTGAACTCAAATCCACATGCAATGATAAAAAAGATTGCTGGATTGGTTTCAGATGTTTATAAACGGCCAAACTCAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAACCTCCCACATGTTTGAGAATAGAGGAGTTCAGCTACTGGGGCAAATACGGAATGGTTCATGTCGTCCTCGAGCAATCTTGTTCAAAGTTCTAGCAGATACTGTTGGACTTGAAAGTCGGTTAATGGTGGGTTTGCCTAACGATGGCACTATTGAGTGTGCGGACTCATATAAGCATTTGTCAGTGATAGTTGTGTTGAACTCTGTTGAACTGTTGGTCGACCTAATGCGGTTTCCAGGCCAGCTGATTCCTCGTTCAACCAAGGCAATCTTTATGACCCATGTATCTGCAGCAGGGGAGAGTGATTCTGCAGAAAATGACTCCTGTGATTCACCATTAGAACCAAACAGTCCTCTATATGGAGTTTCAGAGAGAGTGGATCCTGACAGTGCTGAAAAGGATGAGAGCCTTCAGTTCCGCGGAAGATTTGATGTTGCCTCAAATGTAGCAGGTCCTTCATTGCGAAATATGATGTTGCGACCTACAGCTGCTTTTGACAGAAAACTGAGTTTATCACATAGTGAACCCAACATTGCAACTACTTTTTGGCGGCGTAGCCGGAGAAAGGCCATTGCTGAACAGCGGACTGCTAGTTCGAGTCCAGAACATCCTTCCTTTCGGGCACGTGGCCGGTCCATGCTCGGTGGTGATAGGAAGTCTTTTAGAGATTATGCTGATGACATGCCTAAATCAAGCTACAAGTCAGATGGTGCATCAACATCAGAAGCGCGTAGATTAAGAAGAAGAAGCATTAGTATTACTCCAGAGATTGGTGATGACATCGTAAGCTCAATAACTGGGTATTCAATCAACAACATTAGGGCTGTACGTGCGATGAATGAAACATTGAAGCAAAACCGTCTATTAAGAGGGCAGGGAGACGAGAGGTCATACAGCCACTCTTCAAATGACAGTAATAATCTTCAGAATAATGACCAAATCAGTACACAGAAAGCAATATCATTACCTTCATCGCCGCATCAGTATAGGAGCCAAACATCTGAGAGGGCTGGACCTTCAGAATTCACGAGAAGTGCTGAACTGGTTTCAACATGGAACAGAATTCTTGAATCTGCCACATTTGATAACAAACCTCTATTGCCTTACCAAGAATGGAATATTGATTTCTCAGAATTGAGTGTTGGAACTCGTGTCGGAATAGGATTCTTTGGAGAGGTCTTTCGTGGCATTTGGAATGGAACAGATGTTGCAATTAAGGTTTTTTTAGAGCAAGATCTTACTACGGAGAACATGGAAGATTTCTGCAATGAAATATCCATTCTTAGCCGCATTCGGCATCCAAATGTCATTTTATTTCTGGGTGCATGCACAAAGCCACCACGCTTGTCAATGGTTACAGAATACATGGAGATGGGATCCTTGTATTATTTGATTCATGGCCAGAAGAAGAAGCTTAGCTGGCGAAGGAAACTAAAAATGTTGCGCGATATATGCAGGGGGTTGATGTGCATACACCGCATGAAGATAGTTCATCGTGACCTAAAGAGTGCAAATTGTCTAGTGAATAAGCATTGGGCTGTCAAGATTTGTGATTTTGGGCTCTCAAGAATGATGACTGAGGCAAACATGAAGGACTCCTCATCTGCTGGAACTCCTGAATGGATGGCACCTGAGCTTATCCGAAATGAACCCTTCACAGAAAAGTGTGATATATTCAGCTTTGGGGTGATAATGTGGGAGCTCTGCACTCTAAATAGACCTTGGGAAGGTGTACCACCAGAGAGGGTTGTTTATGCTGTTGCTAATGAGGGTTCACGGTTAGACATTCCGGATAATCCACTAGGCAGGCTCATCTCAGGTATGGGCAATTTGAAAGTATTGTTGGACAGAGCCGCATTTACGACCAACCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
Pfam Domains
Protein Families

Protein Analysis

795

Amino Acids

88.94

Weight (kDa)

6.58

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 57 - 254 2.7e-52 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 552 - 774 9.3e-61 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 552 - 752 1.1e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 468
AasI GACNNNNNNGTC 1 cut(s) 627
Acc36I ACCTGC 1 cut(s) 953
AccB1I GGYRCC 1 cut(s) 2140
AccB7I CCANNNNNTGG 1 cut(s) 1283
AccI GTMKAC 1 cut(s) 732
AccII CGCG 3 cut(s) 933, 1243, 1959
AccIII TCCGGA 2 cut(s) 247, 2302
AclWI GGATC 5 cut(s) 159, 887, 900, 1884, 1897
AcoI YGGCCR 4 cut(s) 62, 473, 1141, 1912
AcsI RAATTY 2 cut(s) 1535, 1575
AcuI CTGAAG 4 cut(s) 398, 908, 1421, 1515
AcvI CACGTG 1 cut(s) 1139
AdeI CACNNNGTG 1 cut(s) 1034
AfaI GTAC 3 cut(s) 1341, 1459, 2247
AfiI CCNNNNNNNGG 5 cut(s) 656, 872, 1078, 1283, 2240
AflIII ACRYGT 1 cut(s) 522
AhdI GACNNNNNGTC 1 cut(s) 1399
AhlI ACTAGT 1 cut(s) 397
AjnI CCWGG 1 cut(s) 748
AjuI GAANNNNNNNTTGG 4 cut(s) 1638, 1670, 2339, 2371
AloI GAACNNNNNNTCC 2 cut(s) 1090, 1122
Alw21I GWGCWC 1 cut(s) 2217
Alw26I GTCTC 3 cut(s) 9, 110, 1386
AlwI GGATC 5 cut(s) 159, 887, 900, 1884, 1897
AlwNI CAGNNNCTG 2 cut(s) 550, 614
Ama87I CYCGRG 1 cut(s) 582
Aor13HI TCCGGA 2 cut(s) 247, 2302
AoxI GGCC 8 cut(s) 26, 41, 62, 473, 751, 1080, 1141, 1912
ApeKI GCWGC 3 cut(s) 500, 803, 1001
ApoI RAATTY 2 cut(s) 1535, 1575
ArsI GACNNNNNNTTYG 2 cut(s) 1090, 1122
Asp700I GAANNNNTTC 1 cut(s) 219
AspLEI GCGC 2 cut(s) 1243, 1959
AspS9I GGNCC 5 cut(s) 26, 41, 965, 1146, 1526
AsuHPI GGTGA 4 cut(s) 837, 1172, 1298, 2212
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 3 cut(s) 965, 1146, 1526
BaeGI GKGCMC 1 cut(s) 1138
BaeI ACNNNNGTAYC 2 cut(s) 780, 813
BalI TGGCCA 2 cut(s) 64, 1914
BamHI GGATCC 2 cut(s) 892, 1889
BanI GGYRCC 1 cut(s) 2140
BanII GRGCYC 3 cut(s) 107, 2076, 2217
BauI CACGAG 3 cut(s) 12, 1540, 1662
BbrPI CACGTG 1 cut(s) 1139
Bbv12I GWGCWC 1 cut(s) 2217
BbvI GCAGC 3 cut(s) 487, 815, 988
BccI CCATC 5 cut(s) 73, 650, 1214, 1879, 2131
BceAI ACGGC 1 cut(s) 488
BciT130I CCWGG 1 cut(s) 750
BcoDI GTCTC 3 cut(s) 9, 110, 1386
BcuI ACTAGT 1 cut(s) 397
BfaI CTAG 6 cut(s) 141, 398, 605, 1104, 2033, 2315
BfmI CTRYAG 3 cut(s) 801, 822, 996
BfuAI ACCTGC 1 cut(s) 953
BglII AGATCT 1 cut(s) 1747
BisI GCNGC 7 cut(s) 501, 804, 1002, 1064, 1490, 1801, 2367
BlpI GCTNAGC 1 cut(s) 1928
BlsI GCNGC 7 cut(s) 502, 805, 1003, 1065, 1491, 1802, 2368
Bme1390I CCNGG 1 cut(s) 750
Bme18I GGWCC 3 cut(s) 965, 1146, 1526
BmeRI GACNNNNNGTC 1 cut(s) 1399
BmeT110I CYCGRG 1 cut(s) 582
BmgT120I GGNCC 5 cut(s) 26, 41, 965, 1146, 1526
BmiI GGNNCC 4 cut(s) 894, 1505, 1891, 2142
BmrFI CCNGG 1 cut(s) 750
BmrI ACTGGG 2 cut(s) 560, 1320
BmsI GCATC 5 cut(s) 10, 188, 1235, 1501, 1819
BmuI ACTGGG 2 cut(s) 560, 1320
BpmI CTGGAG 1 cut(s) 1260
Bpu10I CCTNAGC 1 cut(s) 2145
Bpu1102I GCTNAGC 1 cut(s) 1928
BpuEI CTTGAG 4 cut(s) 93, 142, 245, 2062
BsaAI YACGTR 2 cut(s) 1139, 1343
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 3 cut(s) 774, 931, 2234
BsaWI WCCGGW 2 cut(s) 247, 2302
BsaXI ACNNNNNCTCC 2 cut(s) 121, 151
Bsc4I CCNNNNNNNGG 5 cut(s) 656, 872, 1078, 1283, 2240
Bse118I RCCGGY 1 cut(s) 1143
Bse1I ACTGG 4 cut(s) 510, 555, 1315, 1560
Bse3DI GCAATG 5 cut(s) 435, 971, 1044, 1083, 1786
BseAI TCCGGA 2 cut(s) 247, 2302
BseBI CCWGG 1 cut(s) 750
BseDI CCNNGG 3 cut(s) 774, 931, 2234
BseGI GGATG 4 cut(s) 919, 1120, 1810, 2142
BseLI CCNNNNNNNGG 5 cut(s) 656, 872, 1078, 1283, 2240
BseMI GCAATG 5 cut(s) 435, 971, 1044, 1083, 1786
BseMII CTCAG 8 cut(s) 185, 495, 1010, 1506, 1656, 2082, 2136, 2343
BseNI ACTGG 4 cut(s) 510, 555, 1315, 1560
BseRI GAGGAG 2 cut(s) 552, 2101
BseSI GKGCMC 1 cut(s) 1138
BseXI GCAGC 3 cut(s) 487, 815, 988
BseYI CCCAGC 1 cut(s) 23
BsgI GTGCAG 2 cut(s) 486, 2203
Bsh1236I CGCG 3 cut(s) 933, 1243, 1959
BshFI GGCC 8 cut(s) 28, 43, 64, 475, 753, 1082, 1143, 1914
BshNI GGYRCC 1 cut(s) 2140
BsiHKAI GWGCWC 1 cut(s) 2217
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 4 cut(s) 248, 1072, 1144, 2303
BslI CCNNNNNNNGG 5 cut(s) 656, 872, 1078, 1283, 2240
BsmAI GTCTC 3 cut(s) 9, 110, 1386
BsmBI CGTCTC 2 cut(s) 9, 1386
BsmI GAATGC 2 cut(s) 210, 1803
BsnI GGCC 8 cut(s) 28, 43, 64, 475, 753, 1082, 1143, 1914
Bso31I GGTCTC 1 cut(s) 110
BsoBI CYCGRG 1 cut(s) 582
Bsp1286I GDGCHC 4 cut(s) 107, 1138, 2076, 2217
Bsp13I TCCGGA 2 cut(s) 247, 2302
Bsp143I GATC 4 cut(s) 151, 892, 1747, 1889
Bsp1720I GCTNAGC 1 cut(s) 1928
BspANI GGCC 8 cut(s) 28, 43, 64, 475, 753, 1082, 1143, 1914
BspCNI CTCAG 8 cut(s) 184, 494, 1011, 1507, 1655, 2083, 2137, 2342
BspEI TCCGGA 2 cut(s) 247, 2302
BspFNI CGCG 3 cut(s) 933, 1243, 1959
BspLI GGNNCC 4 cut(s) 894, 1505, 1891, 2142
BspMAI CTGCAG 2 cut(s) 805, 826
BspMI ACCTGC 1 cut(s) 953
BspPI GGATC 5 cut(s) 159, 887, 900, 1884, 1897
BspT107I GGYRCC 1 cut(s) 2140
BspTNI GGTCTC 1 cut(s) 110
BsrDI GCAATG 5 cut(s) 435, 971, 1044, 1083, 1786
BsrFI RCCGGY 1 cut(s) 1143
BsrI ACTGG 4 cut(s) 510, 555, 1315, 1560
BssAI RCCGGY 1 cut(s) 1143
BssECI CCNNGG 3 cut(s) 774, 931, 2234
BssMI GATC 4 cut(s) 151, 892, 1747, 1889
BssSI CACGAG 3 cut(s) 12, 1540, 1662
BssT1I CCWWGG 2 cut(s) 774, 2234
Bst2BI CACGAG 3 cut(s) 12, 1540, 1662
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 7 cut(s) 616, 726, 863, 902, 1373, 1427, 2292
Bst6I CTCTTC 2 cut(s) 108, 1420
BstAPI GCANNNNNTGC 1 cut(s) 500
BstBAI YACGTR 2 cut(s) 1139, 1343
BstC8I GCNNGC 5 cut(s) 30, 755, 1840, 1934, 2321
BstDSI CCRYGG 1 cut(s) 931
BstENI CCTNNNNNAGG 1 cut(s) 2238
BstF5I GGATG 4 cut(s) 919, 1120, 1810, 2142
BstFNI CGCG 3 cut(s) 933, 1243, 1959
BstHHI GCGC 2 cut(s) 1243, 1959
BstKTI GATC 4 cut(s) 154, 895, 1750, 1892
BstMAI GTCTC 3 cut(s) 9, 110, 1386
BstMBI GATC 4 cut(s) 151, 892, 1747, 1889
BstNI CCWGG 1 cut(s) 750
BstNSI RCATGY 4 cut(s) 428, 526, 1198, 1842
BstSCI CCNGG 1 cut(s) 748
BstSFI CTRYAG 3 cut(s) 801, 822, 996
BstSLI GKGCMC 1 cut(s) 1138
BstUI CGCG 3 cut(s) 933, 1243, 1959
BstV1I GCAGC 3 cut(s) 487, 815, 988
BstX2I RGATCY 3 cut(s) 892, 1747, 1889
BstYI RGATCY 3 cut(s) 892, 1747, 1889
BsuRI GGCC 8 cut(s) 28, 43, 64, 475, 753, 1082, 1143, 1914
BtgI CCRYGG 1 cut(s) 931
BtgZI GCGATG 2 cut(s) 1361, 1470
BtsCI GGATG 4 cut(s) 919, 1120, 1810, 2142
BtsIMutI CAGTG 3 cut(s) 503, 702, 907
BveI ACCTGC 1 cut(s) 953
Cac8I GCNNGC 5 cut(s) 30, 755, 1840, 1934, 2321
CaiI CAGNNNCTG 2 cut(s) 550, 614
CfoI GCGC 2 cut(s) 1243, 1959
Cfr10I RCCGGY 1 cut(s) 1143
Cfr13I GGNCC 5 cut(s) 26, 41, 965, 1146, 1526
Cfr42I CCGCGG 1 cut(s) 934
Csp6I GTAC 3 cut(s) 1340, 1458, 2246
CspCI CAANNNNNGTGG 2 cut(s) 1839, 1874
CviQI GTAC 3 cut(s) 1340, 1458, 2246
DpnI GATC 4 cut(s) 153, 894, 1749, 1891
DpnII GATC 4 cut(s) 151, 892, 1747, 1889
DraIII CACNNNGTG 1 cut(s) 1034
DrdI GACNNNNNNGTC 1 cut(s) 627
DriI GACNNNNNGTC 1 cut(s) 1399
DseDI GACNNNNNNGTC 1 cut(s) 627
EaeI YGGCCR 4 cut(s) 62, 473, 1141, 1912
Eam1104I CTCTTC 2 cut(s) 108, 1420
Eam1105I GACNNNNNGTC 1 cut(s) 1399
EarI CTCTTC 2 cut(s) 108, 1420
Ecl136II GAGCTC 1 cut(s) 2215
Eco130I CCWWGG 2 cut(s) 774, 2234
Eco24I GRGCYC 3 cut(s) 107, 2076, 2217
Eco31I GGTCTC 1 cut(s) 110
Eco47I GGWCC 3 cut(s) 965, 1146, 1526
Eco53kI GAGCTC 1 cut(s) 2215
Eco57I CTGAAG 4 cut(s) 398, 908, 1421, 1515
Eco72I CACGTG 1 cut(s) 1139
Eco88I CYCGRG 1 cut(s) 582
EcoICRI GAGCTC 1 cut(s) 2215
EcoNI CCTNNNNNAGG 1 cut(s) 2238
EcoO109I RGGNCCY 2 cut(s) 41, 965
EcoRI GAATTC 2 cut(s) 1535, 1575
EcoRII CCWGG 1 cut(s) 748
EcoT14I CCWWGG 2 cut(s) 774, 2234
EcoT38I GRGCYC 3 cut(s) 107, 2076, 2217
ErhI CCWWGG 2 cut(s) 774, 2234
Esp3I CGTCTC 2 cut(s) 9, 1386
FalI AAGNNNNNCTT 2 cut(s) 767, 799
FblI GTMKAC 1 cut(s) 732
Fnu4HI GCNGC 7 cut(s) 501, 804, 1002, 1064, 1490, 1801, 2367
FokI GGATG 4 cut(s) 926, 1107, 1797, 2149
FriOI GRGCYC 3 cut(s) 107, 2076, 2217
Fsp4HI GCNGC 7 cut(s) 501, 804, 1002, 1064, 1490, 1801, 2367
FspBI CTAG 6 cut(s) 141, 398, 605, 1104, 2033, 2315
GlaI GCGC 2 cut(s) 1242, 1958
GluI GCNGC 7 cut(s) 501, 804, 1002, 1064, 1490, 1801, 2367
GsaI CCCAGC 1 cut(s) 27
GsuI CTGGAG 1 cut(s) 1260
HaeIII GGCC 8 cut(s) 28, 43, 64, 475, 753, 1082, 1143, 1914
HapII CCGG 4 cut(s) 248, 1072, 1144, 2303
HhaI GCGC 2 cut(s) 1243, 1959
Hin6I GCGC 2 cut(s) 1241, 1957
HinP1I GCGC 2 cut(s) 1241, 1957
HincII GTYRAC 1 cut(s) 733
HindII GTYRAC 1 cut(s) 733
HindIII AAGCTT 2 cut(s) 145, 1925
HpaII CCGG 4 cut(s) 248, 1072, 1144, 2303
HphI GGTGA 4 cut(s) 837, 1172, 1298, 2212
Hpy166II GTNNAC 5 cut(s) 733, 1037, 1460, 2246, 2288
Hpy8I GTNNAC 5 cut(s) 733, 1037, 1460, 2246, 2288
HpyCH4III ACNGT 7 cut(s) 616, 726, 863, 902, 1373, 1427, 2292
HpyCH4IV ACGT 2 cut(s) 1138, 1342
HpySE526I ACGT 2 cut(s) 1138, 1342
HspAI GCGC 2 cut(s) 1241, 1957
Kpn2I TCCGGA 2 cut(s) 247, 2302
KspI CCGCGG 1 cut(s) 934
Kzo9I GATC 4 cut(s) 151, 892, 1747, 1889
LmnI GCTCC 2 cut(s) 1503, 2212
Lsp1109I GCAGC 3 cut(s) 487, 815, 988
LweI GCATC 5 cut(s) 10, 188, 1235, 1501, 1819
MaeI CTAG 6 cut(s) 141, 398, 605, 1104, 2033, 2315
MaeII ACGT 2 cut(s) 1138, 1342
MaeIII GTNAC 3 cut(s) 125, 1867, 2009
MalI GATC 4 cut(s) 153, 894, 1749, 1891
MboI GATC 4 cut(s) 151, 892, 1747, 1889
MflI RGATCY 3 cut(s) 892, 1747, 1889
MhlI GDGCHC 4 cut(s) 107, 1138, 2076, 2217
MlsI TGGCCA 2 cut(s) 64, 1914
MluCI AATT 7 cut(s) 219, 1535, 1575, 1646, 1725, 2026, 2341
MluNI TGGCCA 2 cut(s) 64, 1914
MlyI GAGTC 4 cut(s) 671, 827, 1120, 2102
MmeI TCCRAC 4 cut(s) 598, 1636, 1648, 2337
Mox20I TGGCCA 2 cut(s) 64, 1914
MroI TCCGGA 2 cut(s) 247, 2302
MroXI GAANNNNTTC 1 cut(s) 219
MscI TGGCCA 2 cut(s) 64, 1914
MseI TTAA 4 cut(s) 635, 1250, 1379, 1728
MslI CAYNNNNRTG 2 cut(s) 1815, 1883
Msp20I TGGCCA 2 cut(s) 64, 1914
MspA1I CMGCKG 4 cut(s) 757, 933, 1001, 1096
MspI CCGG 4 cut(s) 248, 1072, 1144, 2303
MspR9I CCNGG 1 cut(s) 750
Mva1269I GAATGC 2 cut(s) 210, 1803
MvaI CCWGG 1 cut(s) 750
MvnI CGCG 3 cut(s) 933, 1243, 1959
NdeII GATC 4 cut(s) 151, 892, 1747, 1889
NlaIV GGNNCC 4 cut(s) 894, 1505, 1891, 2142
NmuCI GTSAC 1 cut(s) 2009
NspI RCATGY 4 cut(s) 428, 526, 1198, 1842
PaeI GCATGC 1 cut(s) 1842
PaeR7I CTCGAG 1 cut(s) 582
PciI ACATGT 1 cut(s) 522
PctI GAATGC 2 cut(s) 210, 1803
PdmI GAANNNNTTC 1 cut(s) 219
PfeI GAWTC 8 cut(s) 134, 231, 760, 818, 842, 1583, 1677, 1906
PflMI CCANNNNNTGG 1 cut(s) 1283
PkrI GCNGC 7 cut(s) 502, 805, 1003, 1065, 1491, 1802, 2368
PleI GAGTC 4 cut(s) 671, 827, 1119, 2102
PmaCI CACGTG 1 cut(s) 1139
PmlI CACGTG 1 cut(s) 1139
PpsI GAGTC 4 cut(s) 671, 827, 1119, 2102
Ppu21I YACGTR 2 cut(s) 1139, 1343
PpuMI RGGWCCY 1 cut(s) 965
PscI ACATGT 1 cut(s) 522
PsiI TTATAA 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 2217
Psp5II RGGWCCY 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 748
PspCI CACGTG 1 cut(s) 1139
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 4 cut(s) 894, 1505, 1891, 2142
PspPI GGNCC 5 cut(s) 26, 41, 965, 1146, 1526
PspPPI RGGWCCY 1 cut(s) 965
PspXI VCTCGAGB 1 cut(s) 582
PstI CTGCAG 2 cut(s) 805, 826
PstNI CAGNNNCTG 2 cut(s) 550, 614
PsuI RGATCY 3 cut(s) 892, 1747, 1889
PvuII CAGCTG 2 cut(s) 757, 1001
RsaI GTAC 3 cut(s) 1341, 1459, 2247
RsaNI GTAC 3 cut(s) 1340, 1458, 2246
RseI CAYNNNNRTG 2 cut(s) 1815, 1883
SacI GAGCTC 1 cut(s) 2217
SacII CCGCGG 1 cut(s) 934
SalI GTCGAC 1 cut(s) 731
SaqAI TTAA 4 cut(s) 635, 1250, 1379, 1728
SatI GCNGC 7 cut(s) 501, 804, 1002, 1064, 1490, 1801, 2367
Sau3AI GATC 4 cut(s) 151, 892, 1747, 1889
Sau96I GGNCC 5 cut(s) 26, 41, 965, 1146, 1526
SchI GAGTC 4 cut(s) 671, 827, 1120, 2102
ScrFI CCNGG 1 cut(s) 750
SduI GDGCHC 4 cut(s) 107, 1138, 2076, 2217
SfaNI GCATC 5 cut(s) 10, 188, 1235, 1501, 1819
SfcI CTRYAG 3 cut(s) 801, 822, 996
Sfr274I CTCGAG 1 cut(s) 582
Sfr303I CCGCGG 1 cut(s) 934
SgrBI CCGCGG 1 cut(s) 934
SinI GGWCC 3 cut(s) 965, 1146, 1526
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 2 cut(s) 1815, 1883
SmlI CTYRAG 5 cut(s) 108, 121, 260, 582, 2077
SmoI CTYRAG 5 cut(s) 108, 121, 260, 582, 2077
SpeI ACTAGT 1 cut(s) 397
SphI GCATGC 1 cut(s) 1842
Sse9I AATT 7 cut(s) 219, 1535, 1575, 1646, 1725, 2026, 2341
SspI AATATT 1 cut(s) 1633
SspMI CTAG 6 cut(s) 141, 398, 605, 1104, 2033, 2315
SstI GAGCTC 1 cut(s) 2217
StyD4I CCNGG 1 cut(s) 748
StyI CCWWGG 2 cut(s) 774, 2234
TaaI ACNGT 7 cut(s) 616, 726, 863, 902, 1373, 1427, 2292
TaiI ACGT 2 cut(s) 1141, 1345
TaqI TCGA 3 cut(s) 583, 732, 1109
TasI AATT 7 cut(s) 219, 1535, 1575, 1646, 1725, 2026, 2341
TatI WGTACW 1 cut(s) 1457
TauI GCSGC 4 cut(s) 1066, 1492, 1803, 2369
TfiI GAWTC 8 cut(s) 134, 231, 760, 818, 842, 1583, 1677, 1906
Tru1I TTAA 4 cut(s) 635, 1250, 1379, 1728
Tru9I TTAA 4 cut(s) 635, 1250, 1379, 1728
TscAI CASTG 3 cut(s) 510, 702, 907
TseFI GTSAC 1 cut(s) 2009
TseI GCWGC 3 cut(s) 500, 803, 1001
Tsp45I GTSAC 1 cut(s) 2009
TspGWI ACGGA 3 cut(s) 146, 577, 1772
TspRI CASTG 3 cut(s) 510, 702, 907
Van91I CCANNNNNTGG 1 cut(s) 1283
VpaK11BI GGWCC 3 cut(s) 965, 1146, 1526
XagI CCTNNNNNAGG 1 cut(s) 2238
XapI RAATTY 2 cut(s) 1535, 1575
XceI RCATGY 4 cut(s) 428, 526, 1198, 1842
XhoI CTCGAG 1 cut(s) 582
XmiI GTMKAC 1 cut(s) 732
XmnI GAANNNNTTC 1 cut(s) 219
XspI CTAG 6 cut(s) 141, 398, 605, 1104, 2033, 2315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.