Rroxscaffold_2G00132160

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
69167414 .. 69176058
8645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00132160.1

Sequence Viewer

Length: 2940 bp
ATGGCTACCTTCATTGAGGGTATGACCAAAAGCTTTGCCACTGATGGCTTGAAAGGGGCGGCAGAGAAGCTTGAACACCAATCTGCCCCTGATGTCAAATTCAACTCTGTTGCACCACTTCCCTTGGGTGACGAAACTTCACACAATTTGTGTTCTAATAAAAGCATGGAGGGAGCCATTAAAACACAAGTGAATCATGCTATTGTTCCTAGTGCTCCCCCATTGTTACTCGAATCTTCTTTGGAGATTAATGAACATGTTGTGGAGCAAAGTCCAAGTCTTGGTGCACGTGAAACAACTCACACACCGAGTTTGACTGCTCCCCTAGACACTAGTGTTTCAAGCACAGAAATAAGTGTCTATTCAGACAGTGGTCCAGTGATCGATACTAATGAAATTTCTCTGTCACCCAAATTTCCAATCAGGACTCATGGTGGTGTGGAAGTAAATGCACATCCAGTTCCTTCACTGGTTCACCTGTCAGTATGTAATGCAAGAGAGCAGGGTTCATGGGGTGCTCTAATTTCTTATGAAGCATGTGTTAGGCTCTGCCTTCATGCATGGGCTAACCACTACTCCACTGAAGTTCACTGTTTCCTTGAGAATGAATGTGCACTGTTGCGTGAGGCATTTGGTCTACAGAATGTATTATTACAATCAGAAGCTGAACTTTTGGCAAAAGGGTCTTCAAAGCTCTCAAGTGAATCAGCTGCTCCAAATCCTGTGAAAACTTCTGGCAAAATAAAATTGCAAGTTCGTAAAGTAATAATGGGTTTGGATGAACCACCTGCCAGCTGCAGTTTTTCATCTCTAAAAGAACCAAAGATTAATAAAGACTCAATTGGTAGACACATCTCCAATTTAAGTTTTCCAGATAGCCTTGGTGATGATTTAATCATAGCAGTTCAAGATTCAAAAGGAAAGCATTGTGGTCATGCCCGAGCTCAAGTGTCTGCCATAGCTGATAAGCCCGGTGACAAGTTACGATGGTGTCCAATATATACCGATCTAGAGCTTGAACCTGTTGGCAGAATTCAGTTGTGCATGGAGTATTCCACAAATCCAGATGAAAATCATCATCTTAAGTTTGGCTCCATTGCAGAAACTGCGGCATATGACTATGTCTTCGTAGCTGCAATCAAATTTCAACATTTTCAGCAAAGAAGCTTCTTGATAGATGGCTCTTGGAATTGGTTACTGACTGAATTCGCATCTTACTTTGGAGTATCACAGGCATACACAAAATTAAGACACCTTTCCTACATTATGGATGTGGCATCACCGACCGAAGACTGTCTGACCATAGTACATGATATGCTATCGGAGATATTGATGATGAAGAGAAAGAGCACAAATCAGCTTAGTCCATTGGAGAACCACATGCTGGTGAAGATTTTGGATCAAGTAAACCAGATTCTTGCTTTGGTTTTCGAGAATTACAAGTCACTTGAAGAAGATTCGCTGTCAGGGATGATGAATGTTTCTAAACCTGCCAGTGGATTGGCGGCGCCATCTTTGGGACCTGCATTCCAGCTATACTCCCTTCTGCATGATGTGTTGAGTCCCAAGGCGAAAATGAAACTCTGCAGATATTTTCGGGTTGCTGCAAAGAAGAGGTTAAGAGTGCACTTCATGGAGACAGATAACCTCATTCTAAGCAGTAATGAGGGAACACAGAAGGATCCAGTCACTTCTTTTCAGAGGATGAATTCTCTGGTCTCGAGTATCAGAAATGAAATTCTTACTGACATAAGCATCCAGAACCAGAACATCCTCCCAAGTTTTGTAGACCTTCCAAATATTTCTTCATCCATATATAACGTTGAGCTCTGCAGTAGATTGCGTGCTTTCCTTGTTGCATGTCCTCCTCCAGGCTTATCACCTCCAGTTGCAGAACTTATTATTGCAACAGCCGAATTTCAAAAAGATCTTTCCTTGTGGAACATCGATCCTGTAGTCGATGGAGTTAATGCTAAAGAATTGTTTCACTCGCATATAGTTTCATGGATTCGAAACAAGCATTGTACTTTGCTTGACAGGTGCAAACTAGATAAGGAAAACTGGTCTGGTAAAGAAAAACAGAATGAAACAACTCCTTTTATTCATGCTATTTACAACCAGCTGATGGAGACGCTCCATGAATATGAGATCATCAGTTCTCACTTGCCGATGTATACATCTGCTTTGGAGAATGCTATTGCAGATGTTGAGAAGGCAGTTGCTAAAACTCTGGAAAAACGCTATGCTAATGTTTTATCACCACTGAAAGACAATCTGAGAAACAAAATACGAGGCAATAAGTACGTCAAAAAATTATCCGGTCAAACCATTGAGACTTATTATGTCCCAGCCGAGGTAGGAATTGTTTTCAACTCCATGAAGTGCATGCTAGATGTCATGTGGCCGAACATAGAAGCTAAGTTTGAGTCTTGGATGCCTTGGATCGCTAATGATGGATACACCAGAGGAGAACATCTCAATGATGTAATTGTACTCCTGAGAACCAAATATAGAAATTACCGACGAGCAATTGTGGAGAAGCTTGCAAAGAATGCTAGAGTCCAGACAGCAACAAAGTTGAAGAACATTATGCAAGACTCAAAGGAAGTGGAATCAGAGGTCCGAAGTAGAATGCAGCCTTTAGAGGATCTTTTGCGAAAGGAAATAGATAATCTCAGTACTGTCGCCAATGCTACTGTGTGCGTAGATCTCTGCCAGGAATTTTGGGACAGGACAGGACAGGATGTCCTGCGTCTCTTGGAATATAGGAGGAGCAGATCCTGGTACAAAGGCCTACGTGTCGCAGTTTCTATCCTGGATGACATATTTGGCTCGGAAATGCAAAGACTGTGCAGGACTTCATTGAAAGAAAAAGACATGGCGCCACCCGAATCAATAAAGGAAGTACATTCCATTCTTGATCATGATGCTGCAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

979

Amino Acids

109.63

Weight (kDa)

6.2

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0008390)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 796
Acc36I ACCTGC 3 cut(s) 796, 1498, 1531
AccB1I GGYRCC 2 cut(s) 1507, 2881
AccB7I CCANNNNNTGG 3 cut(s) 281, 1384, 2125
AccI GTMKAC 4 cut(s) 637, 847, 1788, 2174
AciI CCGC 3 cut(s) 59, 1109, 1505
AclI AACGTT 1 cut(s) 1821
AclWI GGATC 7 cut(s) 1407, 1676, 1689, 1943, 2450, 2655, 2772
AcoI YGGCCR 1 cut(s) 2402
AcuI CTGAAG 1 cut(s) 603
AcvI CACGTG 1 cut(s) 290
AcyI GRCGYC 2 cut(s) 1508, 2882
AfaI GTAC 7 cut(s) 1308, 2026, 2303, 2493, 2680, 2786, 2907
AfiI CCNNNNNNNGG 7 cut(s) 281, 1384, 1496, 1517, 1871, 2125, 2353
AflII CTTAAG 1 cut(s) 1082
AflIII ACRYGT 2 cut(s) 256, 2797
AhdI GACNNNNNGTC 1 cut(s) 2744
AhlI ACTAGT 1 cut(s) 332
AjnI CCWGG 4 cut(s) 1870, 2715, 2780, 2814
AjuI GAANNNNNNNTTGG 2 cut(s) 1789, 1821
Alw21I GWGCWC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
Alw26I GTCTC 5 cut(s) 1631, 1723, 2123, 2327, 2759
Alw44I GTGCAC 3 cut(s) 285, 612, 1625
AlwI GGATC 7 cut(s) 1407, 1676, 1689, 1943, 2450, 2655, 2772
AlwNI CAGNNNCTG 3 cut(s) 665, 1106, 2781
Ama87I CYCGRG 2 cut(s) 939, 1720
AoxI GGCC 2 cut(s) 2402, 2791
ApaLI GTGCAC 3 cut(s) 285, 612, 1625
ApeKI GCWGC 6 cut(s) 710, 795, 1133, 1604, 2635, 2930
ArsI GACNNNNNNTTYG 4 cut(s) 262, 294, 1109, 1141
AseI ATTAAT 2 cut(s) 249, 828
Asp700I GAANNNNTTC 1 cut(s) 1983
AspLEI GCGC 2 cut(s) 1510, 2884
AspS9I GGNCC 3 cut(s) 374, 1520, 2620
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 9 cut(s) 140, 399, 467, 896, 986, 1272, 1399, 1872, 2250
AsuII TTCGAA 1 cut(s) 2011
AvaI CYCGRG 2 cut(s) 939, 1720
AvaII GGWCC 3 cut(s) 374, 1520, 2620
BaeGI GKGCMC 3 cut(s) 289, 616, 1629
BamHI GGATCC 1 cut(s) 1681
BanI GGYRCC 2 cut(s) 1507, 2881
BanII GRGCYC 2 cut(s) 946, 1830
BbrPI CACGTG 1 cut(s) 290
BbsI GAAGAC 3 cut(s) 678, 1117, 1296
Bbv12I GWGCWC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
BbvI GCAGC 6 cut(s) 697, 782, 1120, 1591, 2647, 2917
BccI CCATC 7 cut(s) 38, 981, 1172, 1519, 1955, 2119, 2447
BciT130I CCWGG 4 cut(s) 1872, 2717, 2782, 2816
BciVI GTATCC 1 cut(s) 2450
BclI TGATCA 1 cut(s) 2920
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 5 cut(s) 1631, 1723, 2123, 2327, 2759
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 7 cut(s) 210, 326, 333, 1010, 2048, 2390, 2556
BfmI CTRYAG 5 cut(s) 638, 796, 1585, 1831, 1953
BfoI RGCGCY 2 cut(s) 1511, 2885
BfrI CTTAAG 1 cut(s) 1082
BfuAI ACCTGC 3 cut(s) 796, 1498, 1531
BfuI GTATCC 1 cut(s) 2450
BglII AGATCT 2 cut(s) 1927, 2707
BisI GCNGC 9 cut(s) 60, 711, 796, 1110, 1134, 1506, 1605, 2636, 2931
BlsI GCNGC 9 cut(s) 61, 712, 797, 1111, 1135, 1507, 1606, 2637, 2932
BmcAI AGTACT 1 cut(s) 2680
Bme1390I CCNGG 5 cut(s) 972, 1872, 2717, 2782, 2816
Bme18I GGWCC 3 cut(s) 374, 1520, 2620
BmeRI GACNNNNNGTC 1 cut(s) 2744
BmeT110I CYCGRG 2 cut(s) 939, 1720
BmgT120I GGNCC 3 cut(s) 374, 1520, 2620
BmiI GGNNCC 6 cut(s) 175, 1093, 1509, 1521, 1683, 2883
BmrFI CCNGG 5 cut(s) 972, 1872, 2717, 2782, 2816
BmsI GCATC 5 cut(s) 1220, 1286, 1764, 2424, 2917
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 3 cut(s) 678, 1117, 1296
BplI GAGNNNNNCTC 2 cut(s) 2460, 2492
BpmI CTGGAG 2 cut(s) 1854, 1869
Bpu14I TTCGAA 1 cut(s) 2011
BpuEI CTTGAG 3 cut(s) 620, 682, 930
BpuMI CCSGG 1 cut(s) 972
Bsa29I ATCGAT 2 cut(s) 384, 1947
BsaAI YACGTR 2 cut(s) 290, 2798
BsaBI GATNNNNATC 1 cut(s) 1071
BsaHI GRCGYC 2 cut(s) 1508, 2882
BsaI GGTCTC 1 cut(s) 1723
BsaJI CCNNGG 5 cut(s) 123, 880, 1566, 2352, 2438
BsaWI WCCGGW 1 cut(s) 2318
BsaXI ACNNNNNCTCC 2 cut(s) 560, 590
Bsc4I CCNNNNNNNGG 7 cut(s) 281, 1384, 1496, 1517, 1871, 2125, 2353
Bse1I ACTGG 7 cut(s) 377, 458, 474, 1494, 1685, 1886, 2066
Bse3DI GCAATG 1 cut(s) 1095
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 4 cut(s) 1872, 2717, 2782, 2816
BseCI ATCGAT 2 cut(s) 384, 1947
BseDI CCNNGG 5 cut(s) 123, 880, 1566, 2352, 2438
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 7 cut(s) 281, 1384, 1496, 1517, 1871, 2125, 2353
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 3 cut(s) 2267, 2489, 2689
BseNI ACTGG 7 cut(s) 377, 458, 474, 1494, 1685, 1886, 2066
BseRI GAGGAG 3 cut(s) 1857, 2481, 2785
BseSI GKGCMC 3 cut(s) 289, 616, 1629
BseXI GCAGC 6 cut(s) 697, 782, 1120, 1591, 2647, 2917
BseYI CCCAGC 1 cut(s) 2347
BsgI GTGCAG 1 cut(s) 2872
Bsh1285I CGRYCG 1 cut(s) 1287
BshFI GGCC 2 cut(s) 2404, 2793
BshNI GGYRCC 2 cut(s) 1507, 2881
BshVI ATCGAT 2 cut(s) 384, 1947
BsiEI CGRYCG 1 cut(s) 1287
BsiHKAI GWGCWC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
BsiHKCI CYCGRG 2 cut(s) 939, 1720
BsiSI CCGG 2 cut(s) 972, 2319
BslFI GGGAC 4 cut(s) 1533, 1548, 2330, 2741
BslI CCNNNNNNNGG 7 cut(s) 281, 1384, 1496, 1517, 1871, 2125, 2353
BsmAI GTCTC 5 cut(s) 1631, 1723, 2123, 2327, 2759
BsmBI CGTCTC 2 cut(s) 2123, 2759
BsmFI GGGAC 4 cut(s) 1533, 1548, 2330, 2741
BsmI GAATGC 4 cut(s) 1526, 2197, 2557, 2637
BsnI GGCC 2 cut(s) 2404, 2793
Bso31I GGTCTC 1 cut(s) 1723
BsoBI CYCGRG 2 cut(s) 939, 1720
Bsp119I TTCGAA 1 cut(s) 2011
Bsp1286I GDGCHC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
BspACI CCGC 3 cut(s) 59, 1109, 1505
BspANI GGCC 2 cut(s) 2404, 2793
BspCNI CTCAG 3 cut(s) 2268, 2490, 2688
BspDI ATCGAT 2 cut(s) 384, 1947
BspHI TCATGA 1 cut(s) 2923
BspLI GGNNCC 6 cut(s) 175, 1093, 1509, 1521, 1683, 2883
BspMAI CTGCAG 3 cut(s) 800, 1589, 1835
BspMI ACCTGC 3 cut(s) 796, 1498, 1531
BspPI GGATC 7 cut(s) 1407, 1676, 1689, 1943, 2450, 2655, 2772
BspT104I TTCGAA 1 cut(s) 2011
BspT107I GGYRCC 2 cut(s) 1507, 2881
BspTI CTTAAG 1 cut(s) 1082
BspTNI GGTCTC 1 cut(s) 1723
BsrDI GCAATG 1 cut(s) 1095
BsrI ACTGG 7 cut(s) 377, 458, 474, 1494, 1685, 1886, 2066
BssECI CCNNGG 5 cut(s) 123, 880, 1566, 2352, 2438
BssNAI GTATAC 1 cut(s) 2175
BssNI GRCGYC 2 cut(s) 1508, 2882
BssT1I CCWWGG 4 cut(s) 123, 880, 1566, 2438
Bst1107I GTATAC 1 cut(s) 2175
Bst2UI CCWGG 4 cut(s) 1872, 2717, 2782, 2816
Bst4CI ACNGT 7 cut(s) 371, 593, 618, 1295, 2683, 2698, 2850
Bst6I CTCTTC 2 cut(s) 1334, 1607
BstACI GRCGYC 2 cut(s) 1508, 2882
BstAFI CTTAAG 1 cut(s) 1082
BstAPI GCANNNNNTGC 2 cut(s) 1106, 2552
BstBAI YACGTR 2 cut(s) 290, 2798
BstBI TTCGAA 1 cut(s) 2011
BstC8I GCNNGC 4 cut(s) 793, 1845, 2387, 2544
BstDEI CTNAG 6 cut(s) 1361, 1655, 2276, 2418, 2498, 2675
BstENI CCTNNNNNAGG 1 cut(s) 1869
BstH2I RGCGCY 2 cut(s) 1511, 2885
BstHHI GCGC 2 cut(s) 1510, 2884
BstMAI GTCTC 5 cut(s) 1631, 1723, 2123, 2327, 2759
BstMCI CGRYCG 1 cut(s) 1287
BstMWI GCNNNNNNNGC 2 cut(s) 1106, 2552
BstNI CCWGG 4 cut(s) 1872, 2717, 2782, 2816
BstNSI RCATGY 5 cut(s) 260, 540, 1384, 1863, 2389
BstPAI GACNNNNGTC 1 cut(s) 372
BstSCI CCNGG 5 cut(s) 970, 1870, 2715, 2780, 2814
BstSFI CTRYAG 5 cut(s) 638, 796, 1585, 1831, 1953
BstSLI GKGCMC 3 cut(s) 289, 616, 1629
BstV1I GCAGC 6 cut(s) 697, 782, 1120, 1591, 2647, 2917
BstV2I GAAGAC 3 cut(s) 678, 1117, 1296
BstX2I RGATCY 5 cut(s) 1681, 1927, 2647, 2707, 2777
BstXI CCANNNNNNTGG 1 cut(s) 1501
BstYI RGATCY 5 cut(s) 1681, 1927, 2647, 2707, 2777
BstZ17I GTATAC 1 cut(s) 2175
Bsu15I ATCGAT 2 cut(s) 384, 1947
BsuI GTATCC 1 cut(s) 2450
BsuRI GGCC 2 cut(s) 2404, 2793
BsuTUI ATCGAT 2 cut(s) 384, 1947
BtsIMutI CAGTG 9 cut(s) 39, 376, 384, 467, 579, 589, 614, 1501, 2261
BveI ACCTGC 3 cut(s) 796, 1498, 1531
Cac8I GCNNGC 4 cut(s) 793, 1845, 2387, 2544
CaiI CAGNNNCTG 3 cut(s) 665, 1106, 2781
CciI TCATGA 1 cut(s) 2923
CfoI GCGC 2 cut(s) 1510, 2884
Cfr13I GGNCC 3 cut(s) 374, 1520, 2620
ClaI ATCGAT 2 cut(s) 384, 1947
CseI GACGC 2 cut(s) 2140, 2741
Csp6I GTAC 7 cut(s) 1307, 2025, 2302, 2492, 2679, 2785, 2906
CspCI CAANNNNNGTGG 4 cut(s) 105, 140, 2589, 2624
CviQI GTAC 7 cut(s) 1307, 2025, 2302, 2492, 2679, 2785, 2906
DdeI CTNAG 6 cut(s) 1361, 1655, 2276, 2418, 2498, 2675
DinI GGCGCC 2 cut(s) 1509, 2883
DriI GACNNNNNGTC 1 cut(s) 2744
EaeI YGGCCR 1 cut(s) 2402
Eam1104I CTCTTC 2 cut(s) 1334, 1607
Eam1105I GACNNNNNGTC 1 cut(s) 2744
EarI CTCTTC 2 cut(s) 1334, 1607
Ecl136II GAGCTC 2 cut(s) 944, 1828
Eco130I CCWWGG 4 cut(s) 123, 880, 1566, 2438
Eco147I AGGCCT 1 cut(s) 2793
Eco24I GRGCYC 2 cut(s) 946, 1830
Eco31I GGTCTC 1 cut(s) 1723
Eco47I GGWCC 3 cut(s) 374, 1520, 2620
Eco53kI GAGCTC 2 cut(s) 944, 1828
Eco57I CTGAAG 1 cut(s) 603
Eco72I CACGTG 1 cut(s) 290
Eco88I CYCGRG 2 cut(s) 939, 1720
EcoICRI GAGCTC 2 cut(s) 944, 1828
EcoNI CCTNNNNNAGG 1 cut(s) 1869
EcoO109I RGGNCCY 1 cut(s) 1520
EcoRI GAATTC 3 cut(s) 1032, 1205, 1708
EcoRII CCWGG 4 cut(s) 1870, 2715, 2780, 2814
EcoT14I CCWWGG 4 cut(s) 123, 880, 1566, 2438
EcoT22I ATGCAT 1 cut(s) 562
EcoT38I GRGCYC 2 cut(s) 946, 1830
EgeI GGCGCC 2 cut(s) 1509, 2883
EheI GGCGCC 2 cut(s) 1509, 2883
ErhI CCWWGG 4 cut(s) 123, 880, 1566, 2438
Esp3I CGTCTC 2 cut(s) 2123, 2759
FalI AAGNNNNNCTT 2 cut(s) 654, 686
FaqI GGGAC 4 cut(s) 1533, 1548, 2330, 2741
FauNDI CATATG 1 cut(s) 1114
FbaI TGATCA 1 cut(s) 2920
FblI GTMKAC 4 cut(s) 637, 847, 1788, 2174
Fnu4HI GCNGC 9 cut(s) 60, 711, 796, 1110, 1134, 1506, 1605, 2636, 2931
FriOI GRGCYC 2 cut(s) 946, 1830
Fsp4HI GCNGC 9 cut(s) 60, 711, 796, 1110, 1134, 1506, 1605, 2636, 2931
FspBI CTAG 7 cut(s) 210, 326, 333, 1010, 2048, 2390, 2556
GlaI GCGC 2 cut(s) 1509, 2883
GluI GCNGC 9 cut(s) 60, 711, 796, 1110, 1134, 1506, 1605, 2636, 2931
GsaI CCCAGC 1 cut(s) 2351
GsuI CTGGAG 2 cut(s) 1854, 1869
HaeII RGCGCY 2 cut(s) 1511, 2885
HaeIII GGCC 2 cut(s) 2404, 2793
HapII CCGG 2 cut(s) 972, 2319
HgaI GACGC 2 cut(s) 2140, 2741
HhaI GCGC 2 cut(s) 1510, 2884
Hin1I GRCGYC 2 cut(s) 1508, 2882
Hin6I GCGC 2 cut(s) 1508, 2882
HinP1I GCGC 2 cut(s) 1508, 2882
HindIII AAGCTT 4 cut(s) 31, 68, 1165, 2540
HpaII CCGG 2 cut(s) 972, 2319
HphI GGTGA 9 cut(s) 140, 399, 467, 896, 986, 1272, 1399, 1872, 2250
Hpy99I CGWCG 1 cut(s) 2526
HpyAV CCTTC 7 cut(s) 19, 474, 563, 1553, 1672, 1802, 2206
HpyCH4III ACNGT 7 cut(s) 371, 593, 618, 1295, 2683, 2698, 2850
HpyCH4IV ACGT 4 cut(s) 289, 1821, 2304, 2797
HpyF10VI GCNNNNNNNGC 2 cut(s) 1106, 2552
HpyF3I CTNAG 6 cut(s) 1361, 1655, 2276, 2418, 2498, 2675
HpySE526I ACGT 4 cut(s) 289, 1821, 2304, 2797
Hsp92I GRCGYC 2 cut(s) 1508, 2882
HspAI GCGC 2 cut(s) 1508, 2882
KasI GGCGCC 2 cut(s) 1507, 2881
Ksp22I TGATCA 1 cut(s) 2920
LmnI GCTCC 8 cut(s) 173, 220, 265, 325, 718, 1097, 2139, 2772
Lsp1109I GCAGC 6 cut(s) 697, 782, 1120, 1591, 2647, 2917
LweI GCATC 5 cut(s) 1220, 1286, 1764, 2424, 2917
MaeI CTAG 7 cut(s) 210, 326, 333, 1010, 2048, 2390, 2556
MaeII ACGT 4 cut(s) 289, 1821, 2304, 2797
MaeIII GTNAC 8 cut(s) 128, 225, 405, 974, 981, 1194, 1443, 1687
MfeI CAATTG 2 cut(s) 840, 2529
MflI RGATCY 5 cut(s) 1681, 1927, 2647, 2707, 2777
MhlI GDGCHC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
Mly113I GGCGCC 2 cut(s) 1508, 2882
MlyI GAGTC 6 cut(s) 421, 830, 1570, 2435, 2568, 2591
Mph1103I ATGCAT 1 cut(s) 562
MroXI GAANNNNTTC 1 cut(s) 1983
MslI CAYNNNNRTG 4 cut(s) 435, 1385, 2142, 2478
MspA1I CMGCKG 3 cut(s) 710, 795, 2122
MspCI CTTAAG 1 cut(s) 1082
MspI CCGG 2 cut(s) 972, 2319
MspR9I CCNGG 5 cut(s) 972, 1872, 2717, 2782, 2816
MunI CAATTG 2 cut(s) 840, 2529
Mva1269I GAATGC 4 cut(s) 1526, 2197, 2557, 2637
MvaI CCWGG 4 cut(s) 1872, 2717, 2782, 2816
MwoI GCNNNNNNNGC 2 cut(s) 1106, 2552
NarI GGCGCC 2 cut(s) 1508, 2882
NciI CCSGG 1 cut(s) 972
NdeI CATATG 1 cut(s) 1114
NlaIV GGNNCC 6 cut(s) 175, 1093, 1509, 1521, 1683, 2883
NmeAIII GCCGAG 1 cut(s) 2377
NmuCI GTSAC 5 cut(s) 128, 405, 974, 1443, 1687
NsiI ATGCAT 1 cut(s) 562
NspI RCATGY 5 cut(s) 260, 540, 1384, 1863, 2389
NspV TTCGAA 1 cut(s) 2011
PaeI GCATGC 1 cut(s) 2389
PaeR7I CTCGAG 1 cut(s) 1720
PagI TCATGA 1 cut(s) 2923
PaqCI CACCTGC 1 cut(s) 796
PceI AGGCCT 1 cut(s) 2793
PciI ACATGT 1 cut(s) 256
PctI GAATGC 4 cut(s) 1526, 2197, 2557, 2637
PdmI GAANNNNTTC 1 cut(s) 1983
PfeI GAWTC 9 cut(s) 193, 233, 704, 911, 1414, 1457, 2008, 2612, 2891
PflFI GACNNNGTC 1 cut(s) 1121
PflMI CCANNNNNTGG 3 cut(s) 281, 1384, 2125
PfoI TCCNGGA 1 cut(s) 2814
PkrI GCNGC 9 cut(s) 61, 712, 797, 1111, 1135, 1507, 1606, 2637, 2932
PleI GAGTC 6 cut(s) 421, 830, 1569, 2434, 2567, 2591
PluTI GGCGCC 2 cut(s) 1511, 2885
PmaCI CACGTG 1 cut(s) 290
PmlI CACGTG 1 cut(s) 290
PpsI GAGTC 6 cut(s) 421, 830, 1569, 2434, 2567, 2591
Ppu21I YACGTR 2 cut(s) 290, 2798
PpuMI RGGWCCY 1 cut(s) 1520
PscI ACATGT 1 cut(s) 256
PshAI GACNNNNGTC 1 cut(s) 372
PshBI ATTAAT 2 cut(s) 249, 828
Psp124BI GAGCTC 2 cut(s) 946, 1830
Psp1406I AACGTT 1 cut(s) 1821
Psp5II RGGWCCY 1 cut(s) 1520
Psp6I CCWGG 4 cut(s) 1870, 2715, 2780, 2814
PspCI CACGTG 1 cut(s) 290
PspFI CCCAGC 1 cut(s) 2347
PspGI CCWGG 4 cut(s) 1870, 2715, 2780, 2814
PspN4I GGNNCC 6 cut(s) 175, 1093, 1509, 1521, 1683, 2883
PspPI GGNCC 3 cut(s) 374, 1520, 2620
PspPPI RGGWCCY 1 cut(s) 1520
PstI CTGCAG 3 cut(s) 800, 1589, 1835
PstNI CAGNNNCTG 3 cut(s) 665, 1106, 2781
PsuI RGATCY 5 cut(s) 1681, 1927, 2647, 2707, 2777
PsyI GACNNNGTC 1 cut(s) 1121
PvuII CAGCTG 3 cut(s) 710, 795, 2122
RsaI GTAC 7 cut(s) 1308, 2026, 2303, 2493, 2680, 2786, 2907
RsaNI GTAC 7 cut(s) 1307, 2025, 2302, 2492, 2679, 2785, 2906
RseI CAYNNNNRTG 4 cut(s) 435, 1385, 2142, 2478
SacI GAGCTC 2 cut(s) 946, 1830
SatI GCNGC 9 cut(s) 60, 711, 796, 1110, 1134, 1506, 1605, 2636, 2931
Sau96I GGNCC 3 cut(s) 374, 1520, 2620
ScaI AGTACT 1 cut(s) 2680
SchI GAGTC 6 cut(s) 421, 830, 1570, 2435, 2568, 2591
ScrFI CCNGG 5 cut(s) 972, 1872, 2717, 2782, 2816
SduI GDGCHC 8 cut(s) 217, 289, 520, 616, 946, 1352, 1629, 1830
SfaNI GCATC 5 cut(s) 1220, 1286, 1764, 2424, 2917
SfcI CTRYAG 5 cut(s) 638, 796, 1585, 1831, 1953
SfoI GGCGCC 2 cut(s) 1509, 2883
Sfr274I CTCGAG 1 cut(s) 1720
SfuI TTCGAA 1 cut(s) 2011
SinI GGWCC 3 cut(s) 374, 1520, 2620
SlaI CTCGAG 1 cut(s) 1720
SmiMI CAYNNNNRTG 4 cut(s) 435, 1385, 2142, 2478
SmlI CTYRAG 5 cut(s) 599, 697, 945, 1082, 1720
SmoI CTYRAG 5 cut(s) 599, 697, 945, 1082, 1720
SpeI ACTAGT 1 cut(s) 332
SphI GCATGC 1 cut(s) 2389
SseBI AGGCCT 1 cut(s) 2793
SsiI CCGC 3 cut(s) 59, 1109, 1505
SspDI GGCGCC 2 cut(s) 1507, 2881
SspI AATATT 1 cut(s) 1801
SspMI CTAG 7 cut(s) 210, 326, 333, 1010, 2048, 2390, 2556
SstI GAGCTC 2 cut(s) 946, 1830
StuI AGGCCT 1 cut(s) 2793
StyD4I CCNGG 5 cut(s) 970, 1870, 2715, 2780, 2814
StyI CCWWGG 4 cut(s) 123, 880, 1566, 2438
TaaI ACNGT 7 cut(s) 371, 593, 618, 1295, 2683, 2698, 2850
TaiI ACGT 4 cut(s) 292, 1824, 2307, 2800
TaqI TCGA 7 cut(s) 231, 384, 1431, 1721, 1947, 1959, 2011
TaqII GACCGA 1 cut(s) 1301
TatI WGTACW 5 cut(s) 1306, 2024, 2491, 2678, 2905
TauI GCSGC 3 cut(s) 62, 1112, 1508
TfiI GAWTC 9 cut(s) 193, 233, 704, 911, 1414, 1457, 2008, 2612, 2891
TscAI CASTG 9 cut(s) 46, 376, 384, 474, 586, 596, 621, 1501, 2268
TseFI GTSAC 5 cut(s) 128, 405, 974, 1443, 1687
TseI GCWGC 6 cut(s) 710, 795, 1133, 1604, 2635, 2930
Tsp45I GTSAC 5 cut(s) 128, 405, 974, 1443, 1687
TspRI CASTG 9 cut(s) 46, 376, 384, 474, 586, 596, 621, 1501, 2268
Tth111I GACNNNGTC 1 cut(s) 1121
Van91I CCANNNNNTGG 3 cut(s) 281, 1384, 2125
Vha464I CTTAAG 1 cut(s) 1082
VneI GTGCAC 3 cut(s) 285, 612, 1625
VpaK11BI GGWCC 3 cut(s) 374, 1520, 2620
VspI ATTAAT 2 cut(s) 249, 828
XagI CCTNNNNNAGG 1 cut(s) 1869
XbaI TCTAGA 1 cut(s) 1009
XceI RCATGY 5 cut(s) 260, 540, 1384, 1863, 2389
XhoI CTCGAG 1 cut(s) 1720
XmiI GTMKAC 4 cut(s) 637, 847, 1788, 2174
XmnI GAANNNNTTC 1 cut(s) 1983
XspI CTAG 7 cut(s) 210, 326, 333, 1010, 2048, 2390, 2556
ZrmI AGTACT 1 cut(s) 2680
Zsp2I ATGCAT 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.