Rh2CG231900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
23569872 .. 23576047
6176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG231900.1

Sequence Viewer

Length: 3207 bp
ATGGCTACCTTCATTGAGGGTATGGCCAAAAGCTTTGCTACTGATGGCTTGAAAGGGGTGGCAGAGAAGCTTGAACACGAATCTGCCCCTGATGTCAAATTCAACTCTTTTGCACCACTTCCCTTGGGTGACAAAACTTCACACAATTTGTGTTCTAATAAAAGCATGGAGGGAGCCATTAAAACGCAAGTGAATCATGCTTGTGTTCCTAGTGCTCCCCCATTGTTACTCGAATCTTCTTTGGAGATTAATGAACATGTTGTGGAGCAAAGTCCAAGTCGTGGTGCACATGAAACAACTCACACACCGAGTTTGACTGCTCCCCTAAACACTAGTGTTTCAAGCACAGAAATAAGTGTCTATTCAGGCAGTGGTACAGTGATCGATACTAATGAAATTTCTCAGTCACCCAAATTTCCAATCAGGACTCATGGTGGTGTGGAAGTAAATACACATCCAGTTCCTTCACTGGTTCACCTGTCAGTATGTAATGCAAGAGAGCAGGGTACATGGGGTGCTGTAATTTCTTATGAAGCATGTGTTAGGCTCTGCCTTCATGCATGGGCTAACCACTATTCCACTGAAGTTCACTATTTCCTTGAGAATGAATGTGCACTGTTGCGTGAGGCATTTGGTCTACAGAATGTATTATTACAATCAGAAGCTGAACTTTTGGCAAAAGGGTCTTCAAAGCTCTCAAGTGAATCAGCTGCTCCAAATCCTGTGAAAACTTCTGGCAAAATAAAATTGCAAGTTCGTAAAGTAATAATGGGTTTGGATGAACCACCTGCCAGCTGCAGTTTTTCATCTCTAAAAGAACCAAAAATTAACAAAGACTCAATTGGTAGACACATCTCCAATTTAAGGTCCAGTTTATATCCCTGGTTAAAATCTGTATGGAAGAATTATTTACCACCACGTGCCCCTGCAAAATGTTCCTTCCGTCAGAGTTTGGATTATGTACAGACTAGAGCTAAACGTATTAAAAAGGTACCCCTTAAAGATGCGAGAAGTACTTTGTGCAATCCATCCTCATCATCACATGAAACATATTCTTGCTTCTTGAGATTGAGAAGCTCACCTGAAGAGGATGCAGTCCGAATGCAACCAGGATCCAGCGAAGCCCATTTCTTTTTTCCAGATAGCCTTGGTGATGATTTAATCATAGCAGTTCAAGATTCAAAAGGAAAGCATTGTGGTCATGCCCGAGCTCAAGTGTCTGCCATAGCTGATAAGCCAGGTGACAAGTTACGATGGTGTCCTATATATACCGATCTAGAGCTTGAACCTGTTGGCAGAATTCAGTTGTGCATGGAGTACTCCACAAATCCAGATGAAAATCATCATCTTAAGTTTGGCTCCGTTGCAGAAACTGCAGCATATGACTATGTCTTCGTAGCTGCAATCAAATTTCAACATTTTCAACAAAGAAGCTTCTTGATAGATGGCTCTTGGAATTGGTTGCTGACTGAATTTGCATCTTACTTTGGAGTATCAGAGGCATACACAAAATTAAGACACCTTTCCTACATTATGGATGTGGCAACACCGACCGAAGACTGTCTGACCATAGTACATGATATGCTATCGGAGATATTGATGATGAAGGGAAAGAGCACAAATCAGCTTAGTCCATTGGAGAACCACATGCTGGCGAAGATTTTGGATCAAGTAAACCAGATTCTTGCTTTGGTTTTCGAGAATTACAAGTCACTTGAAGAAGATTCGCCGTCAGGGATGATGAATGTTTCTAAACCTGCCAGTGGATTGGCGGCACCATCTTTGGGACCTGCATTCCAGCTATACTCCCTTCTGCATGATGTGTTGAGTCCCGAGGTGCAAATGAAACTCTGCAGATATTTTCGGGTTGCTGCAAAGAAGAGGTTAAGAGTGCACTTCATGGAGACAGATAACCTCATTCTAAGCAGCAATGAGGGAACACAGAAGGATCCAGTCACTTCTTATCAGAGGATGAATTCTCTGGTCTCGAGTATCAGAAATGAAATTCTTACTGACATAAGCATCCAGAACCAGAACATCCTCCCAAGTTTTGTAGACCTTCCAAATATTTCTTCATCCATATATAACATTGAGCTCTGCAGTAGATTGCGTGCTTTCCTTGTTGCATGTCCTCCTCCAGGCTTATCACCTCCAGTTGCAGAACTTATTATTGCAACAGCCGAATTTCAAAAGGATCTTTCCTTGTGGAGCATCGATCCTGTAGTCGATGGAGTTAATGCTAAAGAATTGTTTCACTCGCATATAGTTTCATGGATTCGAAACAAGCATTGTACTTTGCTTGACAGGTGCAAACTAGATAAGGAAAACTGGTCTGGTAAAGAAAAACAGAATGAAACAACTCCTTTTATTCATGCTATTTACAACCAGCTGATGGAGACGCTCCATGAATATGAGATCATCAGTTCTCACTTGCCGATGTATACATCTGCTTTGGAGAATGCTATTGCAGATGTTGAGAAGGCAGTTGCTAAAACTCTGGAAAAACGCTATGCTAATGTTTTATCCCTACTGAAAGACAATCTGAGAAACAAAATACTAGGCAATAAGTATGTCAAAAAATTATCCAGTCAAACCATTGAGACTTATTATGTCCCAGCCGAGGTAGGAATTGTTTTCAACTCCATGAAGTGCATGCTGGATGTCATGTGGCCGAACATAGAAGCTAAGTTTGAGTCTTGGATGCCTTCGATCGCTGATGATGGATACACCAGGGGAGAACATCTCAATGATGTAATTGTACTCCTAAGAACCAAATATAGAAATTACCGACGAGCAATTGTGGAGAAGCTTGCAAAGAATGCTAGAGTCCAGGCAGCAACAAAGTTGAAGAACATTATGCGAGACTCAAAGGAAGTGGAATCAGAGGTCCGAAGTAGAATGCAGCCTTTAGAGGATCTTTTGCGAAAGGAAATAGATAATCTCAGTACTGTCGCCAATCCTACTGTGTGCGTAGAACTCTGCCAGGAATTTTGGGACAGGACAGGACAGGATGTCCTGCGTCTCTTGGAATATAGGAGGAGCAGATCCTGGTACAAAGGCCTACGTGTTGCAGTTTCTATCCTGGATGACATATTTGGCTCCGAAATGCAAAGACTGTGCAGGACTTCATTGAAAGAAAAAGACACGGCGCGACCCGAAGCAATAAAGGAAGTACATTCCATTCTTGATCATGATGCTGCAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1068

Amino Acids

119.89

Weight (kDa)

6.66

Isoelectric Point (pI)

49.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0008390)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 796
Acc36I ACCTGC 3 cut(s) 796, 1765, 1798
Acc65I GGTACC 1 cut(s) 991
AccB1I GGYRCC 2 cut(s) 991, 1774
AccB7I CCANNNNNTGG 3 cut(s) 281, 1651, 2392
AccI GTMKAC 4 cut(s) 637, 847, 2055, 2441
AccII CGCG 1 cut(s) 3151
AciI CCGC 1 cut(s) 1772
AclWI GGATC 9 cut(s) 1107, 1120, 1674, 1943, 1956, 2202, 2210, 2922, 3039
AcoI YGGCCR 2 cut(s) 24, 2669
AcuI CTGAAG 2 cut(s) 603, 1104
AcvI CACGTG 1 cut(s) 920
AdeI CACNNNGTG 1 cut(s) 920
AfiI CCNNNNNNNGG 8 cut(s) 281, 864, 1651, 1763, 1784, 2138, 2392, 2620
AflII CTTAAG 1 cut(s) 1349
AflIII ACRYGT 2 cut(s) 256, 3064
AhdI GACNNNNNGTC 1 cut(s) 3011
AhlI ACTAGT 1 cut(s) 332
AjnI CCWGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
AjuI GAANNNNNNNTTGG 2 cut(s) 2056, 2088
Alw21I GWGCWC 7 cut(s) 217, 289, 616, 1213, 1619, 1896, 2097
Alw26I GTCTC 6 cut(s) 1898, 1990, 2390, 2594, 2856, 3026
Alw44I GTGCAC 3 cut(s) 285, 612, 1892
AlwI GGATC 9 cut(s) 1107, 1120, 1674, 1943, 1956, 2202, 2210, 2922, 3039
AlwNI CAGNNNCTG 3 cut(s) 665, 1373, 3048
Ama87I CYCGRG 3 cut(s) 1206, 1832, 1987
AoxI GGCC 3 cut(s) 24, 2669, 3058
ApaLI GTGCAC 3 cut(s) 285, 612, 1892
ApeKI GCWGC 9 cut(s) 710, 795, 1376, 1400, 1871, 1926, 2834, 2902, 3197
ArsI GACNNNNNNTTYG 4 cut(s) 262, 294, 1376, 1408
AseI ATTAAT 1 cut(s) 249
Asp700I GAANNNNTTC 1 cut(s) 2250
Asp718I GGTACC 1 cut(s) 991
AspLEI GCGC 1 cut(s) 3151
AspS9I GGNCC 3 cut(s) 867, 1787, 2887
AsuHPI GGTGA 7 cut(s) 140, 399, 467, 1071, 1163, 1253, 2139
AsuII TTCGAA 1 cut(s) 2278
AvaI CYCGRG 3 cut(s) 1206, 1832, 1987
AvaII GGWCC 3 cut(s) 867, 1787, 2887
BaeGI GKGCMC 4 cut(s) 289, 616, 925, 1896
BalI TGGCCA 1 cut(s) 26
BamHI GGATCC 2 cut(s) 1112, 1948
BanI GGYRCC 2 cut(s) 991, 1774
BanII GRGCYC 2 cut(s) 1213, 2097
BbrPI CACGTG 1 cut(s) 920
BbsI GAAGAC 3 cut(s) 678, 1384, 1563
Bbv12I GWGCWC 7 cut(s) 217, 289, 616, 1213, 1619, 1896, 2097
BbvI GCAGC 9 cut(s) 697, 782, 1387, 1388, 1858, 1938, 2846, 2914, 3184
BccI CCATC 8 cut(s) 38, 1036, 1248, 1439, 1786, 2222, 2386, 2714
BceAI ACGGC 2 cut(s) 1714, 3162
BciT130I CCWGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
BciVI GTATCC 1 cut(s) 2717
BclI TGATCA 1 cut(s) 3187
BcoDI GTCTC 6 cut(s) 1898, 1990, 2390, 2594, 2856, 3026
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 7 cut(s) 210, 333, 969, 1277, 2315, 2558, 2823
BfmI CTRYAG 6 cut(s) 638, 796, 1374, 1852, 2098, 2220
BfrI CTTAAG 1 cut(s) 1349
BfuAI ACCTGC 3 cut(s) 796, 1765, 1798
BfuI GTATCC 1 cut(s) 2717
BmcAI AGTACT 3 cut(s) 1015, 1319, 2947
Bme1390I CCNGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
Bme18I GGWCC 3 cut(s) 867, 1787, 2887
BmeRI GACNNNNNGTC 1 cut(s) 3011
BmeT110I CYCGRG 3 cut(s) 1206, 1832, 1987
BmgT120I GGNCC 3 cut(s) 867, 1787, 2887
BmiI GGNNCC 8 cut(s) 175, 993, 1114, 1360, 1776, 1788, 1950, 3100
BmrFI CCNGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
BmsI GCATC 7 cut(s) 994, 1081, 1487, 2031, 2220, 2691, 3184
BpiI GAAGAC 3 cut(s) 678, 1384, 1563
BplI GAGNNNNNCTC 2 cut(s) 2727, 2759
BpmI CTGGAG 2 cut(s) 2121, 2136
Bpu14I TTCGAA 1 cut(s) 2278
BpuEI CTTGAG 4 cut(s) 620, 682, 1084, 1197
Bsa29I ATCGAT 2 cut(s) 384, 2214
BsaAI YACGTR 2 cut(s) 920, 3065
BsaBI GATNNNNATC 1 cut(s) 1338
BsaI GGTCTC 1 cut(s) 1990
BsaJI CCNNGG 6 cut(s) 123, 881, 1147, 1833, 2619, 2730
Bsc4I CCNNNNNNNGG 8 cut(s) 281, 864, 1651, 1763, 1784, 2138, 2392, 2620
Bse1I ACTGG 8 cut(s) 458, 474, 870, 1761, 1952, 2153, 2333, 2586
Bse3DI GCAATG 1 cut(s) 1936
Bse8I GATNNNNATC 1 cut(s) 1338
BseBI CCWGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
BseCI ATCGAT 2 cut(s) 384, 2214
BseDI CCNNGG 6 cut(s) 123, 881, 1147, 1833, 2619, 2730
BseJI GATNNNNATC 1 cut(s) 1338
BseLI CCNNNNNNNGG 8 cut(s) 281, 864, 1651, 1763, 1784, 2138, 2392, 2620
BseMI GCAATG 1 cut(s) 1936
BseMII CTCAG 3 cut(s) 416, 2534, 2956
BseNI ACTGG 8 cut(s) 458, 474, 870, 1761, 1952, 2153, 2333, 2586
BseRI GAGGAG 2 cut(s) 2124, 3052
BseSI GKGCMC 4 cut(s) 289, 616, 925, 1896
BseXI GCAGC 9 cut(s) 697, 782, 1387, 1388, 1858, 1938, 2846, 2914, 3184
BseYI CCCAGC 1 cut(s) 2614
BsgI GTGCAG 1 cut(s) 3139
Bsh1236I CGCG 1 cut(s) 3151
Bsh1285I CGRYCG 2 cut(s) 1554, 2712
BshFI GGCC 3 cut(s) 26, 2671, 3060
BshNI GGYRCC 2 cut(s) 991, 1774
BshVI ATCGAT 2 cut(s) 384, 2214
BsiEI CGRYCG 2 cut(s) 1554, 2712
BsiHKAI GWGCWC 7 cut(s) 217, 289, 616, 1213, 1619, 1896, 2097
BsiHKCI CYCGRG 3 cut(s) 1206, 1832, 1987
BslFI GGGAC 4 cut(s) 1800, 1815, 2597, 3008
BslI CCNNNNNNNGG 8 cut(s) 281, 864, 1651, 1763, 1784, 2138, 2392, 2620
BsmAI GTCTC 6 cut(s) 1898, 1990, 2390, 2594, 2856, 3026
BsmBI CGTCTC 2 cut(s) 2390, 3026
BsmFI GGGAC 4 cut(s) 1800, 1815, 2597, 3008
BsmI GAATGC 5 cut(s) 1107, 1793, 2464, 2824, 2904
BsnI GGCC 3 cut(s) 26, 2671, 3060
Bso31I GGTCTC 1 cut(s) 1990
BsoBI CYCGRG 3 cut(s) 1206, 1832, 1987
Bsp119I TTCGAA 1 cut(s) 2278
Bsp1286I GDGCHC 8 cut(s) 217, 289, 616, 925, 1213, 1619, 1896, 2097
Bsp1407I TGTACA 1 cut(s) 961
BspACI CCGC 1 cut(s) 1772
BspANI GGCC 3 cut(s) 26, 2671, 3060
BspCNI CTCAG 3 cut(s) 415, 2535, 2955
BspDI ATCGAT 2 cut(s) 384, 2214
BspFNI CGCG 1 cut(s) 3151
BspHI TCATGA 1 cut(s) 3190
BspLI GGNNCC 8 cut(s) 175, 993, 1114, 1360, 1776, 1788, 1950, 3100
BspMAI CTGCAG 4 cut(s) 800, 1378, 1856, 2102
BspMI ACCTGC 3 cut(s) 796, 1765, 1798
BspPI GGATC 9 cut(s) 1107, 1120, 1674, 1943, 1956, 2202, 2210, 2922, 3039
BspT104I TTCGAA 1 cut(s) 2278
BspT107I GGYRCC 2 cut(s) 991, 1774
BspTI CTTAAG 1 cut(s) 1349
BspTNI GGTCTC 1 cut(s) 1990
BsrDI GCAATG 1 cut(s) 1936
BsrGI TGTACA 1 cut(s) 961
BsrI ACTGG 8 cut(s) 458, 474, 870, 1761, 1952, 2153, 2333, 2586
BssECI CCNNGG 6 cut(s) 123, 881, 1147, 1833, 2619, 2730
BssNAI GTATAC 1 cut(s) 2442
BssT1I CCWWGG 2 cut(s) 123, 1147
Bst1107I GTATAC 1 cut(s) 2442
Bst2UI CCWGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
Bst4CI ACNGT 6 cut(s) 379, 618, 1562, 2950, 2965, 3117
Bst6I CTCTTC 2 cut(s) 1080, 1874
BstAFI CTTAAG 1 cut(s) 1349
BstAPI GCANNNNNTGC 2 cut(s) 1373, 2819
BstAUI TGTACA 1 cut(s) 961
BstBAI YACGTR 2 cut(s) 920, 3065
BstBI TTCGAA 1 cut(s) 2278
BstC8I GCNNGC 5 cut(s) 793, 1653, 2112, 2654, 2811
BstDEI CTNAG 7 cut(s) 402, 1628, 1922, 2543, 2685, 2765, 2942
BstENI CCTNNNNNAGG 1 cut(s) 2136
BstFNI CGCG 1 cut(s) 3151
BstHHI GCGC 1 cut(s) 3151
BstMAI GTCTC 6 cut(s) 1898, 1990, 2390, 2594, 2856, 3026
BstMCI CGRYCG 2 cut(s) 1554, 2712
BstMWI GCNNNNNNNGC 2 cut(s) 1373, 2819
BstNI CCWGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
BstNSI RCATGY 5 cut(s) 260, 540, 1651, 2130, 2656
BstSCI CCNGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
BstSFI CTRYAG 6 cut(s) 638, 796, 1374, 1852, 2098, 2220
BstSLI GKGCMC 4 cut(s) 289, 616, 925, 1896
BstUI CGCG 1 cut(s) 3151
BstV1I GCAGC 9 cut(s) 697, 782, 1387, 1388, 1858, 1938, 2846, 2914, 3184
BstV2I GAAGAC 3 cut(s) 678, 1384, 1563
BstX2I RGATCY 5 cut(s) 1112, 1948, 2194, 2914, 3044
BstXI CCANNNNNNTGG 1 cut(s) 1768
BstYI RGATCY 5 cut(s) 1112, 1948, 2194, 2914, 3044
BstZ17I GTATAC 1 cut(s) 2442
Bsu15I ATCGAT 2 cut(s) 384, 2214
BsuI GTATCC 1 cut(s) 2717
BsuRI GGCC 3 cut(s) 26, 2671, 3060
BsuTUI ATCGAT 2 cut(s) 384, 2214
BtsI GCAGTG 1 cut(s) 376
BtsIMutI CAGTG 6 cut(s) 376, 384, 467, 579, 614, 1768
BveI ACCTGC 3 cut(s) 796, 1765, 1798
Cac8I GCNNGC 5 cut(s) 793, 1653, 2112, 2654, 2811
CaiI CAGNNNCTG 3 cut(s) 665, 1373, 3048
CciI TCATGA 1 cut(s) 3190
CfoI GCGC 1 cut(s) 3151
Cfr13I GGNCC 3 cut(s) 867, 1787, 2887
ClaI ATCGAT 2 cut(s) 384, 2214
CseI GACGC 2 cut(s) 2407, 3008
CspCI CAANNNNNGTGG 4 cut(s) 105, 140, 2856, 2891
DdeI CTNAG 7 cut(s) 402, 1628, 1922, 2543, 2685, 2765, 2942
DraIII CACNNNGTG 1 cut(s) 920
DriI GACNNNNNGTC 1 cut(s) 3011
EaeI YGGCCR 2 cut(s) 24, 2669
Eam1104I CTCTTC 2 cut(s) 1080, 1874
Eam1105I GACNNNNNGTC 1 cut(s) 3011
EarI CTCTTC 2 cut(s) 1080, 1874
Ecl136II GAGCTC 2 cut(s) 1211, 2095
Eco130I CCWWGG 2 cut(s) 123, 1147
Eco147I AGGCCT 1 cut(s) 3060
Eco24I GRGCYC 2 cut(s) 1213, 2097
Eco31I GGTCTC 1 cut(s) 1990
Eco47I GGWCC 3 cut(s) 867, 1787, 2887
Eco53kI GAGCTC 2 cut(s) 1211, 2095
Eco57I CTGAAG 2 cut(s) 603, 1104
Eco72I CACGTG 1 cut(s) 920
Eco88I CYCGRG 3 cut(s) 1206, 1832, 1987
EcoICRI GAGCTC 2 cut(s) 1211, 2095
EcoNI CCTNNNNNAGG 1 cut(s) 2136
EcoO109I RGGNCCY 1 cut(s) 1787
EcoRI GAATTC 2 cut(s) 1299, 1975
EcoRII CCWGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
EcoT14I CCWWGG 2 cut(s) 123, 1147
EcoT22I ATGCAT 1 cut(s) 562
EcoT38I GRGCYC 2 cut(s) 1213, 2097
ErhI CCWWGG 2 cut(s) 123, 1147
Esp3I CGTCTC 2 cut(s) 2390, 3026
FalI AAGNNNNNCTT 2 cut(s) 654, 686
FaqI GGGAC 4 cut(s) 1800, 1815, 2597, 3008
FauNDI CATATG 1 cut(s) 1381
FbaI TGATCA 1 cut(s) 3187
FblI GTMKAC 4 cut(s) 637, 847, 2055, 2441
FriOI GRGCYC 2 cut(s) 1213, 2097
FspBI CTAG 7 cut(s) 210, 333, 969, 1277, 2315, 2558, 2823
GlaI GCGC 1 cut(s) 3150
GsaI CCCAGC 1 cut(s) 2618
GsuI CTGGAG 2 cut(s) 2121, 2136
HaeIII GGCC 3 cut(s) 26, 2671, 3060
HgaI GACGC 2 cut(s) 2407, 3008
HhaI GCGC 1 cut(s) 3151
Hin6I GCGC 1 cut(s) 3149
HinP1I GCGC 1 cut(s) 3149
HindIII AAGCTT 4 cut(s) 31, 68, 1432, 2807
HphI GGTGA 7 cut(s) 140, 399, 467, 1071, 1163, 1253, 2139
Hpy99I CGWCG 1 cut(s) 2793
HpyCH4III ACNGT 6 cut(s) 379, 618, 1562, 2950, 2965, 3117
HpyCH4IV ACGT 3 cut(s) 919, 979, 3064
HpyF10VI GCNNNNNNNGC 2 cut(s) 1373, 2819
HpyF3I CTNAG 7 cut(s) 402, 1628, 1922, 2543, 2685, 2765, 2942
HpySE526I ACGT 3 cut(s) 919, 979, 3064
HspAI GCGC 1 cut(s) 3149
KpnI GGTACC 1 cut(s) 995
Ksp22I TGATCA 1 cut(s) 3187
Lsp1109I GCAGC 9 cut(s) 697, 782, 1387, 1388, 1858, 1938, 2846, 2914, 3184
LweI GCATC 7 cut(s) 994, 1081, 1487, 2031, 2220, 2691, 3184
MaeI CTAG 7 cut(s) 210, 333, 969, 1277, 2315, 2558, 2823
MaeII ACGT 3 cut(s) 919, 979, 3064
MaeIII GTNAC 7 cut(s) 128, 225, 405, 1241, 1248, 1710, 1954
MfeI CAATTG 2 cut(s) 840, 2796
MflI RGATCY 5 cut(s) 1112, 1948, 2194, 2914, 3044
MhlI GDGCHC 8 cut(s) 217, 289, 616, 925, 1213, 1619, 1896, 2097
MlsI TGGCCA 1 cut(s) 26
MluNI TGGCCA 1 cut(s) 26
MlyI GAGTC 6 cut(s) 421, 830, 1837, 2702, 2835, 2858
Mox20I TGGCCA 1 cut(s) 26
Mph1103I ATGCAT 1 cut(s) 562
MroXI GAANNNNTTC 1 cut(s) 2250
MscI TGGCCA 1 cut(s) 26
MslI CAYNNNNRTG 4 cut(s) 201, 435, 2409, 2745
Msp20I TGGCCA 1 cut(s) 26
MspA1I CMGCKG 3 cut(s) 710, 795, 2389
MspCI CTTAAG 1 cut(s) 1349
MspR9I CCNGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
MunI CAATTG 2 cut(s) 840, 2796
Mva1269I GAATGC 5 cut(s) 1107, 1793, 2464, 2824, 2904
MvaI CCWGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
MvnI CGCG 1 cut(s) 3151
MwoI GCNNNNNNNGC 2 cut(s) 1373, 2819
NdeI CATATG 1 cut(s) 1381
NlaIV GGNNCC 8 cut(s) 175, 993, 1114, 1360, 1776, 1788, 1950, 3100
NmeAIII GCCGAG 1 cut(s) 2644
NmuCI GTSAC 5 cut(s) 128, 405, 1241, 1710, 1954
NsiI ATGCAT 1 cut(s) 562
NspI RCATGY 5 cut(s) 260, 540, 1651, 2130, 2656
NspV TTCGAA 1 cut(s) 2278
PaeI GCATGC 1 cut(s) 2656
PaeR7I CTCGAG 1 cut(s) 1987
PagI TCATGA 1 cut(s) 3190
PaqCI CACCTGC 1 cut(s) 796
PceI AGGCCT 1 cut(s) 3060
PciI ACATGT 1 cut(s) 256
PctI GAATGC 5 cut(s) 1107, 1793, 2464, 2824, 2904
PdmI GAANNNNTTC 1 cut(s) 2250
PfeI GAWTC 9 cut(s) 80, 193, 233, 704, 1178, 1681, 1724, 2275, 2879
PflFI GACNNNGTC 1 cut(s) 1388
PflMI CCANNNNNTGG 3 cut(s) 281, 1651, 2392
PfoI TCCNGGA 1 cut(s) 3081
Ple19I CGATCG 1 cut(s) 2712
PleI GAGTC 6 cut(s) 421, 830, 1836, 2701, 2834, 2858
PmaCI CACGTG 1 cut(s) 920
PmlI CACGTG 1 cut(s) 920
PpsI GAGTC 6 cut(s) 421, 830, 1836, 2701, 2834, 2858
Ppu21I YACGTR 2 cut(s) 920, 3065
PpuMI RGGWCCY 1 cut(s) 1787
PscI ACATGT 1 cut(s) 256
PshBI ATTAAT 1 cut(s) 249
Psp124BI GAGCTC 2 cut(s) 1213, 2097
Psp5II RGGWCCY 1 cut(s) 1787
Psp6I CCWGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
PspCI CACGTG 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 2614
PspGI CCWGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
PspN4I GGNNCC 8 cut(s) 175, 993, 1114, 1360, 1776, 1788, 1950, 3100
PspPI GGNCC 3 cut(s) 867, 1787, 2887
PspPPI RGGWCCY 1 cut(s) 1787
PstI CTGCAG 4 cut(s) 800, 1378, 1856, 2102
PstNI CAGNNNCTG 3 cut(s) 665, 1373, 3048
PsuI RGATCY 5 cut(s) 1112, 1948, 2194, 2914, 3044
PsyI GACNNNGTC 1 cut(s) 1388
PvuI CGATCG 1 cut(s) 2712
PvuII CAGCTG 3 cut(s) 710, 795, 2389
RseI CAYNNNNRTG 4 cut(s) 201, 435, 2409, 2745
SacI GAGCTC 2 cut(s) 1213, 2097
Sau96I GGNCC 3 cut(s) 867, 1787, 2887
ScaI AGTACT 3 cut(s) 1015, 1319, 2947
SchI GAGTC 6 cut(s) 421, 830, 1837, 2702, 2835, 2858
ScrFI CCNGG 9 cut(s) 883, 1110, 1239, 2139, 2731, 2831, 2984, 3049, 3083
SduI GDGCHC 8 cut(s) 217, 289, 616, 925, 1213, 1619, 1896, 2097
SfaNI GCATC 7 cut(s) 994, 1081, 1487, 2031, 2220, 2691, 3184
SfcI CTRYAG 6 cut(s) 638, 796, 1374, 1852, 2098, 2220
Sfr274I CTCGAG 1 cut(s) 1987
SfuI TTCGAA 1 cut(s) 2278
SinI GGWCC 3 cut(s) 867, 1787, 2887
SlaI CTCGAG 1 cut(s) 1987
SmiMI CAYNNNNRTG 4 cut(s) 201, 435, 2409, 2745
SmlI CTYRAG 6 cut(s) 599, 697, 1063, 1212, 1349, 1987
SmoI CTYRAG 6 cut(s) 599, 697, 1063, 1212, 1349, 1987
SpeI ACTAGT 1 cut(s) 332
SphI GCATGC 1 cut(s) 2656
SseBI AGGCCT 1 cut(s) 3060
SsiI CCGC 1 cut(s) 1772
SspI AATATT 1 cut(s) 2068
SspMI CTAG 7 cut(s) 210, 333, 969, 1277, 2315, 2558, 2823
SstI GAGCTC 2 cut(s) 1213, 2097
StuI AGGCCT 1 cut(s) 3060
StyD4I CCNGG 9 cut(s) 881, 1108, 1237, 2137, 2729, 2829, 2982, 3047, 3081
StyI CCWWGG 2 cut(s) 123, 1147
TaaI ACNGT 6 cut(s) 379, 618, 1562, 2950, 2965, 3117
TaiI ACGT 3 cut(s) 922, 982, 3067
TaqI TCGA 8 cut(s) 231, 384, 1698, 1988, 2214, 2226, 2278, 2708
TaqII GACCGA 1 cut(s) 1568
TatI WGTACW 8 cut(s) 961, 1013, 1317, 1573, 2291, 2758, 2945, 3172
TauI GCSGC 1 cut(s) 1775
TfiI GAWTC 9 cut(s) 80, 193, 233, 704, 1178, 1681, 1724, 2275, 2879
TscAI CASTG 6 cut(s) 376, 384, 474, 586, 621, 1768
TseFI GTSAC 5 cut(s) 128, 405, 1241, 1710, 1954
TseI GCWGC 9 cut(s) 710, 795, 1376, 1400, 1871, 1926, 2834, 2902, 3197
Tsp45I GTSAC 5 cut(s) 128, 405, 1241, 1710, 1954
TspGWI ACGGA 2 cut(s) 932, 1351
TspRI CASTG 6 cut(s) 376, 384, 474, 586, 621, 1768
Tth111I GACNNNGTC 1 cut(s) 1388
Van91I CCANNNNNTGG 3 cut(s) 281, 1651, 2392
Vha464I CTTAAG 1 cut(s) 1349
VneI GTGCAC 3 cut(s) 285, 612, 1892
VpaK11BI GGWCC 3 cut(s) 867, 1787, 2887
VspI ATTAAT 1 cut(s) 249
XagI CCTNNNNNAGG 1 cut(s) 2136
XbaI TCTAGA 1 cut(s) 1276
XceI RCATGY 5 cut(s) 260, 540, 1651, 2130, 2656
XhoI CTCGAG 1 cut(s) 1987
XmiI GTMKAC 4 cut(s) 637, 847, 2055, 2441
XmnI GAANNNNTTC 1 cut(s) 2250
XspI CTAG 7 cut(s) 210, 333, 969, 1277, 2315, 2558, 2823
ZrmI AGTACT 3 cut(s) 1015, 1319, 2947
Zsp2I ATGCAT 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.