ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G60660 |
| fragaria_vesca | FvH4_1g06100 FvH4_1g06100 FvH4_1g06100 |
| malus_domestica | MD02G1065500.v1.1 |
| prunus_persica | Prupe.7G220000_v2.0.a1 Prupe.7G220000_v2.0.a1 |
| pyrus_communis | pycom02g05160 |
| rosa_chinensis | RchiOBHm_Chr2g0091851 |
| rosa_laevigata | RLG00000016257 |
| rosa_multiflora | Rmu_co8418845.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00149670 Rroxscaffold_2G00149680 |
| rosa_rugosa | Rorug02G0021500 |
| rosa_samantha | Rh2AG066300 Rh2AG066500 Rh2BG065700 Rh2CG067100 Rh2DG065500 |
| rosa_wichuraiana | Rw2G005440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 59, 542 |
| AccII | CGCG | 1 cut(s) | 659 |
| AciI | CCGC | 2 cut(s) | 403, 734 |
| AcyI | GRCGYC | 1 cut(s) | 60 |
| AfaI | GTAC | 3 cut(s) | 268, 280, 467 |
| AflIII | ACRYGT | 1 cut(s) | 651 |
| AgsI | TTSAA | 3 cut(s) | 157, 377, 715 |
| AjiI | CACGTC | 1 cut(s) | 652 |
| AluBI | AGCT | 1 cut(s) | 305 |
| AluI | AGCT | 1 cut(s) | 305 |
| AoxI | GGCC | 2 cut(s) | 68, 551 |
| ApeKI | GCWGC | 1 cut(s) | 606 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 28, 60 |
| AseI | ATTAAT | 1 cut(s) | 348 |
| AspLEI | GCGC | 3 cut(s) | 62, 176, 659 |
| AspS9I | GGNCC | 1 cut(s) | 69 |
| AsuHPI | GGTGA | 4 cut(s) | 200, 496, 544, 680 |
| BanI | GGYRCC | 2 cut(s) | 59, 542 |
| BbvI | GCAGC | 1 cut(s) | 618 |
| BccI | CCATC | 3 cut(s) | 142, 395, 625 |
| BceAI | ACGGC | 2 cut(s) | 142, 594 |
| BclI | TGATCA | 5 cut(s) | 3, 48, 358, 364, 486 |
| BfaI | CTAG | 2 cut(s) | 182, 665 |
| BfmI | CTRYAG | 1 cut(s) | 506 |
| BfoI | RGCGCY | 1 cut(s) | 63 |
| BisI | GCNGC | 1 cut(s) | 607 |
| BlsI | GCNGC | 1 cut(s) | 608 |
| BmgBI | CACGTC | 1 cut(s) | 652 |
| BmgT120I | GGNCC | 1 cut(s) | 69 |
| BmiI | GGNNCC | 3 cut(s) | 61, 419, 544 |
| BmsI | GCATC | 2 cut(s) | 3, 486 |
| BsaAI | YACGTR | 1 cut(s) | 781 |
| BsaBI | GATNNNNATC | 2 cut(s) | 53, 363 |
| BsaHI | GRCGYC | 1 cut(s) | 60 |
| Bse1I | ACTGG | 1 cut(s) | 309 |
| Bse3DI | GCAATG | 1 cut(s) | 405 |
| Bse8I | GATNNNNATC | 2 cut(s) | 53, 363 |
| BseGI | GGATG | 2 cut(s) | 459, 592 |
| BseJI | GATNNNNATC | 2 cut(s) | 53, 363 |
| BseMI | GCAATG | 1 cut(s) | 405 |
| BseNI | ACTGG | 1 cut(s) | 309 |
| BseXI | GCAGC | 1 cut(s) | 618 |
| Bsh1236I | CGCG | 1 cut(s) | 659 |
| BshFI | GGCC | 2 cut(s) | 70, 553 |
| BshNI | GGYRCC | 2 cut(s) | 59, 542 |
| BsnI | GGCC | 2 cut(s) | 70, 553 |
| Bsp1407I | TGTACA | 1 cut(s) | 278 |
| Bsp143I | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| BspACI | CCGC | 2 cut(s) | 403, 734 |
| BspANI | GGCC | 2 cut(s) | 70, 553 |
| BspFNI | CGCG | 1 cut(s) | 659 |
| BspHI | TCATGA | 1 cut(s) | 361 |
| BspLI | GGNNCC | 3 cut(s) | 61, 419, 544 |
| BspT107I | GGYRCC | 2 cut(s) | 59, 542 |
| BsrDI | GCAATG | 1 cut(s) | 405 |
| BsrGI | TGTACA | 1 cut(s) | 278 |
| BsrI | ACTGG | 1 cut(s) | 309 |
| BssMI | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| BssNI | GRCGYC | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 3 cut(s) | 397, 470, 493 |
| Bst6I | CTCTTC | 1 cut(s) | 282 |
| BstACI | GRCGYC | 1 cut(s) | 60 |
| BstAUI | TGTACA | 1 cut(s) | 278 |
| BstBAI | YACGTR | 1 cut(s) | 781 |
| BstF5I | GGATG | 2 cut(s) | 459, 592 |
| BstFNI | CGCG | 1 cut(s) | 659 |
| BstH2I | RGCGCY | 1 cut(s) | 63 |
| BstHHI | GCGC | 3 cut(s) | 62, 176, 659 |
| BstKTI | GATC | 5 cut(s) | 6, 51, 361, 367, 489 |
| BstMBI | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| BstSFI | CTRYAG | 1 cut(s) | 506 |
| BstSNI | TACGTA | 1 cut(s) | 781 |
| BstUI | CGCG | 1 cut(s) | 659 |
| BstV1I | GCAGC | 1 cut(s) | 618 |
| BsuRI | GGCC | 2 cut(s) | 70, 553 |
| BtrI | CACGTC | 1 cut(s) | 652 |
| BtsCI | GGATG | 2 cut(s) | 459, 592 |
| BtsIMutI | CAGTG | 2 cut(s) | 316, 498 |
| CciI | TCATGA | 1 cut(s) | 361 |
| CfoI | GCGC | 3 cut(s) | 62, 176, 659 |
| Cfr13I | GGNCC | 1 cut(s) | 69 |
| Csp6I | GTAC | 3 cut(s) | 267, 279, 466 |
| CviAII | CATG | 3 cut(s) | 106, 362, 454 |
| CviJI | RGCY | 5 cut(s) | 70, 305, 553, 561, 609 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 305, 553, 561, 609 |
| CviQI | GTAC | 3 cut(s) | 267, 279, 466 |
| DinI | GGCGCC | 1 cut(s) | 61 |
| DpnI | GATC | 5 cut(s) | 5, 50, 360, 366, 488 |
| DpnII | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| Eam1104I | CTCTTC | 1 cut(s) | 282 |
| EarI | CTCTTC | 1 cut(s) | 282 |
| Eco105I | TACGTA | 1 cut(s) | 781 |
| Eco147I | AGGCCT | 1 cut(s) | 553 |
| EgeI | GGCGCC | 1 cut(s) | 61 |
| EheI | GGCGCC | 1 cut(s) | 61 |
| FaeI | CATG | 3 cut(s) | 109, 365, 457 |
| FatI | CATG | 3 cut(s) | 105, 361, 453 |
| FauNDI | CATATG | 1 cut(s) | 705 |
| FbaI | TGATCA | 5 cut(s) | 3, 48, 358, 364, 486 |
| Fnu4HI | GCNGC | 1 cut(s) | 607 |
| FokI | GGATG | 2 cut(s) | 446, 599 |
| Fsp4HI | GCNGC | 1 cut(s) | 607 |
| FspBI | CTAG | 2 cut(s) | 182, 665 |
| GlaI | GCGC | 3 cut(s) | 61, 175, 658 |
| GluI | GCNGC | 1 cut(s) | 607 |
| HaeII | RGCGCY | 1 cut(s) | 63 |
| HaeIII | GGCC | 2 cut(s) | 70, 553 |
| HhaI | GCGC | 3 cut(s) | 62, 176, 659 |
| Hin1I | GRCGYC | 1 cut(s) | 60 |
| Hin1II | CATG | 3 cut(s) | 109, 365, 457 |
| Hin6I | GCGC | 3 cut(s) | 60, 174, 657 |
| HinP1I | GCGC | 3 cut(s) | 60, 174, 657 |
| HinfI | GANTC | 2 cut(s) | 54, 719 |
| HphI | GGTGA | 4 cut(s) | 200, 496, 544, 680 |
| Hpy166II | GTNNAC | 4 cut(s) | 194, 251, 677, 764 |
| Hpy188I | TCNGA | 2 cut(s) | 8, 53 |
| Hpy188III | TCNNGA | 3 cut(s) | 157, 316, 362 |
| Hpy8I | GTNNAC | 4 cut(s) | 194, 251, 677, 764 |
| HpyAV | CCTTC | 2 cut(s) | 68, 227 |
| HpyCH4III | ACNGT | 3 cut(s) | 397, 470, 493 |
| HpyCH4IV | ACGT | 2 cut(s) | 651, 780 |
| HpyCH4V | TGCA | 5 cut(s) | 16, 30, 123, 499, 606 |
| HpySE526I | ACGT | 2 cut(s) | 651, 780 |
| Hsp92I | GRCGYC | 1 cut(s) | 60 |
| Hsp92II | CATG | 3 cut(s) | 109, 365, 457 |
| HspAI | GCGC | 3 cut(s) | 60, 174, 657 |
| KasI | GGCGCC | 1 cut(s) | 59 |
| Ksp22I | TGATCA | 5 cut(s) | 3, 48, 358, 364, 486 |
| Kzo9I | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| LpnPI | CCDG | 5 cut(s) | 322, 435, 459, 476, 515 |
| Lsp1109I | GCAGC | 1 cut(s) | 618 |
| LweI | GCATC | 2 cut(s) | 3, 486 |
| MaeI | CTAG | 2 cut(s) | 182, 665 |
| MaeII | ACGT | 2 cut(s) | 651, 780 |
| MaeIII | GTNAC | 1 cut(s) | 532 |
| MalI | GATC | 5 cut(s) | 5, 50, 360, 366, 488 |
| MboI | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| MboII | GAAGA | 3 cut(s) | 299, 329, 602 |
| MluCI | AATT | 4 cut(s) | 274, 294, 382, 790 |
| Mly113I | GGCGCC | 1 cut(s) | 60 |
| MnlI | CCTC | 5 cut(s) | 60, 283, 410, 475, 710 |
| MseI | TTAA | 3 cut(s) | 230, 348, 446 |
| MslI | CAYNNNNRTG | 2 cut(s) | 110, 494 |
| MvnI | CGCG | 1 cut(s) | 659 |
| NarI | GGCGCC | 1 cut(s) | 60 |
| NdeI | CATATG | 1 cut(s) | 705 |
| NdeII | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| NlaIII | CATG | 3 cut(s) | 109, 365, 457 |
| NlaIV | GGNNCC | 3 cut(s) | 61, 419, 544 |
| NmuCI | GTSAC | 1 cut(s) | 532 |
| PagI | TCATGA | 1 cut(s) | 361 |
| PceI | AGGCCT | 1 cut(s) | 553 |
| PfeI | GAWTC | 2 cut(s) | 54, 719 |
| PkrI | GCNGC | 1 cut(s) | 608 |
| PluTI | GGCGCC | 1 cut(s) | 63 |
| Ppu21I | YACGTR | 1 cut(s) | 781 |
| PshBI | ATTAAT | 1 cut(s) | 348 |
| PspN4I | GGNNCC | 3 cut(s) | 61, 419, 544 |
| PspPI | GGNCC | 1 cut(s) | 69 |
| RsaI | GTAC | 3 cut(s) | 268, 280, 467 |
| RsaNI | GTAC | 3 cut(s) | 267, 279, 466 |
| RseI | CAYNNNNRTG | 2 cut(s) | 110, 494 |
| SaqAI | TTAA | 3 cut(s) | 230, 348, 446 |
| SatI | GCNGC | 1 cut(s) | 607 |
| Sau3AI | GATC | 5 cut(s) | 3, 48, 358, 364, 486 |
| Sau96I | GGNCC | 1 cut(s) | 69 |
| SetI | ASST | 6 cut(s) | 79, 213, 307, 486, 654, 783 |
| SfaNI | GCATC | 2 cut(s) | 3, 486 |
| SfcI | CTRYAG | 1 cut(s) | 506 |
| SfoI | GGCGCC | 1 cut(s) | 61 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 110, 494 |
| SnaBI | TACGTA | 1 cut(s) | 781 |
| Sse9I | AATT | 4 cut(s) | 274, 294, 382, 790 |
| SseBI | AGGCCT | 1 cut(s) | 553 |
| SsiI | CCGC | 2 cut(s) | 403, 734 |
| SspDI | GGCGCC | 1 cut(s) | 59 |
| SspMI | CTAG | 2 cut(s) | 182, 665 |
| StuI | AGGCCT | 1 cut(s) | 553 |
| TaaI | ACNGT | 3 cut(s) | 397, 470, 493 |
| TaiI | ACGT | 2 cut(s) | 654, 783 |
| TasI | AATT | 4 cut(s) | 274, 294, 382, 790 |
| TatI | WGTACW | 2 cut(s) | 278, 465 |
| TfiI | GAWTC | 2 cut(s) | 54, 719 |
| Tru1I | TTAA | 3 cut(s) | 230, 348, 446 |
| Tru9I | TTAA | 3 cut(s) | 230, 348, 446 |
| TscAI | CASTG | 2 cut(s) | 316, 498 |
| TseFI | GTSAC | 1 cut(s) | 532 |
| TseI | GCWGC | 1 cut(s) | 606 |
| Tsp45I | GTSAC | 1 cut(s) | 532 |
| TspDTI | ATGAA | 3 cut(s) | 194, 603, 732 |
| TspRI | CASTG | 2 cut(s) | 316, 498 |
| VspI | ATTAAT | 1 cut(s) | 348 |
| XspI | CTAG | 2 cut(s) | 182, 665 |