No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20350 |
| fragaria_vesca | FvH4_1g02030 FvH4_1g02030 FvH4_1g02030 |
| malus_domestica | MD02G1018500.v1.1 MD15G1162500.v1.1 |
| prunus_persica | Prupe.7G252300_v2.0.a1 |
| pyrus_communis | pycom02g01660 pycom15g14610 |
| rosa_chinensis | RchiOBHm_Chr2g0087091 |
| rosa_laevigata | RLG00000015831 |
| rosa_multiflora | Rmu_sc0005550.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00153890 Rroxscaffold_3G00239100 |
| rosa_rugosa | Rorug01G0472400 |
| rosa_samantha | Rh2AG025700 Rh2BG025400 Rh2CG026000 Rh2DG025900 |
| rosa_wichuraiana | Rw2G002040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 3 cut(s) | 30, 49, 188 |
| AluI | AGCT | 3 cut(s) | 30, 49, 188 |
| Alw26I | GTCTC | 1 cut(s) | 108 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 4 cut(s) | 30, 46, 58, 198 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| BbvI | GCAGC | 4 cut(s) | 17, 58, 70, 185 |
| BceAI | ACGGC | 1 cut(s) | 179 |
| BcoDI | GTCTC | 1 cut(s) | 108 |
| BfaI | CTAG | 2 cut(s) | 137, 189 |
| BfmI | CTRYAG | 2 cut(s) | 31, 56 |
| BisI | GCNGC | 4 cut(s) | 31, 47, 59, 199 |
| BlsI | GCNGC | 4 cut(s) | 32, 48, 60, 200 |
| BmrI | ACTGGG | 1 cut(s) | 57 |
| BmuI | ACTGGG | 1 cut(s) | 57 |
| BpmI | CTGGAG | 2 cut(s) | 66, 204 |
| BsaWI | WCCGGW | 1 cut(s) | 37 |
| Bse1I | ACTGG | 3 cut(s) | 63, 83, 187 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseNI | ACTGG | 3 cut(s) | 63, 83, 187 |
| BseRI | GAGGAG | 2 cut(s) | 41, 69 |
| BseXI | GCAGC | 4 cut(s) | 17, 58, 70, 185 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BsiSI | CCGG | 1 cut(s) | 38 |
| BsmAI | GTCTC | 1 cut(s) | 108 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspMAI | CTGCAG | 2 cut(s) | 35, 60 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BsrI | ACTGG | 3 cut(s) | 63, 83, 187 |
| BssMI | GATC | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 2 cut(s) | 24, 102 |
| BstC8I | GCNNGC | 1 cut(s) | 122 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMAI | GTCTC | 1 cut(s) | 108 |
| BstMBI | GATC | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstSFI | CTRYAG | 2 cut(s) | 31, 56 |
| BstV1I | GCAGC | 4 cut(s) | 17, 58, 70, 185 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| Cac8I | GCNNGC | 1 cut(s) | 122 |
| CfoI | GCGC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 169 |
| CviJI | RGCY | 6 cut(s) | 30, 49, 61, 176, 188, 198 |
| CviKI_1 | RGCY | 6 cut(s) | 30, 49, 61, 176, 188, 198 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| Eco147I | AGGCCT | 1 cut(s) | 176 |
| FaeI | CATG | 1 cut(s) | 172 |
| FaiI | YATR | 2 cut(s) | 170, 180 |
| FatI | CATG | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 4 cut(s) | 31, 47, 59, 199 |
| Fsp4HI | GCNGC | 4 cut(s) | 31, 47, 59, 199 |
| FspBI | CTAG | 2 cut(s) | 137, 189 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GluI | GCNGC | 4 cut(s) | 31, 47, 59, 199 |
| GsuI | CTGGAG | 2 cut(s) | 66, 204 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 38 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1II | CATG | 1 cut(s) | 172 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| HinfI | GANTC | 1 cut(s) | 208 |
| HpaII | CCGG | 1 cut(s) | 38 |
| Hpy166II | GTNNAC | 1 cut(s) | 161 |
| Hpy188III | TCNNGA | 1 cut(s) | 225 |
| Hpy8I | GTNNAC | 1 cut(s) | 161 |
| HpyAV | CCTTC | 1 cut(s) | 166 |
| HpyCH4III | ACNGT | 2 cut(s) | 24, 102 |
| HpyCH4V | TGCA | 3 cut(s) | 33, 58, 201 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| Hsp92II | CATG | 1 cut(s) | 172 |
| HspAI | GCGC | 1 cut(s) | 217 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LmnI | GCTCC | 2 cut(s) | 54, 185 |
| LpnPI | CCDG | 6 cut(s) | 51, 68, 76, 96, 112, 168 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 58, 70, 185 |
| MaeI | CTAG | 2 cut(s) | 137, 189 |
| MaeIII | GTNAC | 1 cut(s) | 96 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MboII | GAAGA | 2 cut(s) | 23, 203 |
| MluCI | AATT | 1 cut(s) | 220 |
| MnlI | CCTC | 3 cut(s) | 62, 87, 90 |
| MspA1I | CMGCKG | 1 cut(s) | 30 |
| MspI | CCGG | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 1 cut(s) | 172 |
| PceI | AGGCCT | 1 cut(s) | 176 |
| PfeI | GAWTC | 1 cut(s) | 208 |
| PkrI | GCNGC | 4 cut(s) | 32, 48, 60, 200 |
| PstI | CTGCAG | 2 cut(s) | 35, 60 |
| PvuII | CAGCTG | 1 cut(s) | 30 |
| SatI | GCNGC | 4 cut(s) | 31, 47, 59, 199 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| SetI | ASST | 3 cut(s) | 32, 51, 190 |
| SfcI | CTRYAG | 2 cut(s) | 31, 56 |
| Sse9I | AATT | 1 cut(s) | 220 |
| SseBI | AGGCCT | 1 cut(s) | 176 |
| SspMI | CTAG | 2 cut(s) | 137, 189 |
| StuI | AGGCCT | 1 cut(s) | 176 |
| TaaI | ACNGT | 2 cut(s) | 24, 102 |
| TasI | AATT | 1 cut(s) | 220 |
| TfiI | GAWTC | 1 cut(s) | 208 |
| TseI | GCWGC | 4 cut(s) | 30, 46, 58, 198 |
| TspDTI | ATGAA | 2 cut(s) | 33, 185 |
| XspI | CTAG | 2 cut(s) | 137, 189 |