Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08350 AT1G08350 AT1G08350 AT1G08350 |
| fragaria_vesca | FvH4_3g24860 FvH4_3g24860 FvH4_3g24860 |
| prunus_persica | Prupe.6G129500_v2.0.a1 Prupe.6G129500_v2.0.a1 |
| pyrus_communis | pycom11g13620 |
| rosa_chinensis | RchiOBHm_Chr5g0044441 |
| rosa_laevigata | RLG00000034275 |
| rosa_multiflora | Rmu_sc0007129.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00036530 Rroxscaffold_3G00244750 |
| rosa_rugosa | Rorug05G0214400 Rorug05G0341800 |
| rosa_samantha | Rh1CG017200 Rh5AG298700 Rh5BG305800 Rh5CG333000 Rh5DG315100 |
| rosa_wichuraiana | Rw5G027620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 43 |
| AcuI | CTGAAG | 2 cut(s) | 30, 57 |
| AfaI | GTAC | 1 cut(s) | 167 |
| AgsI | TTSAA | 2 cut(s) | 20, 142 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AluBI | AGCT | 1 cut(s) | 14 |
| AluI | AGCT | 1 cut(s) | 14 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| Alw26I | GTCTC | 2 cut(s) | 96, 149 |
| AlwI | GGATC | 1 cut(s) | 43 |
| AspS9I | GGNCC | 1 cut(s) | 134 |
| AvaII | GGWCC | 1 cut(s) | 134 |
| BaeGI | GKGCMC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| BcoDI | GTCTC | 2 cut(s) | 96, 149 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| Bme18I | GGWCC | 1 cut(s) | 134 |
| BmgT120I | GGNCC | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BsaI | GGTCTC | 1 cut(s) | 149 |
| BsaJI | CCNNGG | 1 cut(s) | 190 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 93, 123 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseDI | CCNNGG | 1 cut(s) | 190 |
| BseMII | CTCAG | 1 cut(s) | 75 |
| BseSI | GKGCMC | 1 cut(s) | 8 |
| BseYI | CCCAGC | 1 cut(s) | 149 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| BslFI | GGGAC | 1 cut(s) | 95 |
| BsmAI | GTCTC | 2 cut(s) | 96, 149 |
| BsmFI | GGGAC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 149 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 42 |
| Bsp143I | GATC | 2 cut(s) | 48, 82 |
| BspCNI | CTCAG | 1 cut(s) | 74 |
| BspPI | GGATC | 1 cut(s) | 43 |
| BspTNI | GGTCTC | 1 cut(s) | 149 |
| BssECI | CCNNGG | 1 cut(s) | 190 |
| BssMI | GATC | 2 cut(s) | 48, 82 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| BstDEI | CTNAG | 1 cut(s) | 61 |
| BstKTI | GATC | 2 cut(s) | 51, 85 |
| BstMAI | GTCTC | 2 cut(s) | 96, 149 |
| BstMBI | GATC | 2 cut(s) | 48, 82 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BstSLI | GKGCMC | 1 cut(s) | 8 |
| BtsIMutI | CAGTG | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 1 cut(s) | 134 |
| Csp6I | GTAC | 1 cut(s) | 166 |
| CviJI | RGCY | 2 cut(s) | 14, 77 |
| CviKI_1 | RGCY | 2 cut(s) | 14, 77 |
| CviQI | GTAC | 1 cut(s) | 166 |
| DdeI | CTNAG | 1 cut(s) | 61 |
| DpnI | GATC | 2 cut(s) | 50, 84 |
| DpnII | GATC | 2 cut(s) | 48, 82 |
| Eco31I | GGTCTC | 1 cut(s) | 149 |
| Eco47I | GGWCC | 1 cut(s) | 134 |
| Eco57I | CTGAAG | 2 cut(s) | 30, 57 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| FaiI | YATR | 3 cut(s) | 87, 93, 171 |
| FaqI | GGGAC | 1 cut(s) | 95 |
| GsaI | CCCAGC | 1 cut(s) | 153 |
| HincII | GTYRAC | 1 cut(s) | 124 |
| HindII | GTYRAC | 1 cut(s) | 124 |
| HindIII | AAGCTT | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 25 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 1 cut(s) | 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyAV | CCTTC | 1 cut(s) | 196 |
| HpyF3I | CTNAG | 1 cut(s) | 61 |
| Kzo9I | GATC | 2 cut(s) | 48, 82 |
| LpnPI | CCDG | 2 cut(s) | 163, 176 |
| MalI | GATC | 2 cut(s) | 50, 84 |
| MboI | GATC | 2 cut(s) | 48, 82 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MhlI | GDGCHC | 2 cut(s) | 8, 42 |
| MlyI | GAGTC | 1 cut(s) | 34 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| NdeII | GATC | 2 cut(s) | 48, 82 |
| PflFI | GACNNNGTC | 1 cut(s) | 107 |
| PleI | GAGTC | 1 cut(s) | 33 |
| PpsI | GAGTC | 1 cut(s) | 33 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspFI | CCCAGC | 1 cut(s) | 149 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PspPI | GGNCC | 1 cut(s) | 134 |
| PsyI | GACNNNGTC | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 167 |
| RsaNI | GTAC | 1 cut(s) | 166 |
| Sau3AI | GATC | 2 cut(s) | 48, 82 |
| Sau96I | GGNCC | 1 cut(s) | 134 |
| SchI | GAGTC | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SduI | GDGCHC | 2 cut(s) | 8, 42 |
| SetI | ASST | 2 cut(s) | 16, 161 |
| SgeI | CNNG | 5 cut(s) | 41, 55, 127, 162, 166 |
| SinI | GGWCC | 1 cut(s) | 134 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| TaqII | GACCGA | 1 cut(s) | 122 |
| TscAI | CASTG | 1 cut(s) | 13 |
| TspRI | CASTG | 1 cut(s) | 13 |
| Tth111I | GACNNNGTC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 134 |