Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008677

Physical Location & Seq

Genomic Coordinates Reverse (-)

22077005 .. 22079404

Gene Structure 2400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0214400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGTTTACCTCTTTTGCTCCATTTGAAAGCGTGCTGAGCTTAGAAACTATAGGAAACCTGGGCCTAGTTTACTACATGTTTCTGGTGGGATTAGAACTTGAACTAAAGCCAGTAATCCGTGCCGGGAAGAAGGCTCTTAGCATTGCCCTCGTAGGCATGGTGGTGGCCATCGCCAGTGGTTGGGGCTTGTTTTTTGTCCTAGACGACAACATCAAGCCTAATCTTAAGTTTCTGAAAGCCCCAAATCAGCGAGACAACACACACTCAGGCCACTTGTTCTGGGCACTCGCCCTCGGCACCACAAGCTTCCCAGACGTGGCTCGACTCCTCGCAGATCTTAAGCTCCTCCACTCCGAGCTTGGACGACTTGCATTGTCATCTGCTGTCATCTCCGACCTGTGCTCGTGGTTCCTTTTCATCTTGCTACTAGCACTAACCAATCTGACGGGCCACTTTTTGGTGGCGGGACTGACTACCCTGGCCTTCGTATGGTTTTGTGTTTTTGTACTCCGCCCAGCTCTTCCAAAGCTGATCCGCTTCGTAGCGAAAAACAAAGAGGACAAGAGAGACAACTACAATGAGCTCCATGTGAGCTTTGTTCTCATGGGGGTTCTGGTATGCGCCATGATAACTGATTCGTTAGGTACACTATCCTACGTTGGGGCTTTCGTGTTTGGAGCCATTATGCCGAGGGGAGAGCTCAGCAAATTGGTCGTAGAGAAGATCCAACCCTTTGTGACTGGGATTATGATGCCCCTTTTCTTCTTAATCGTCGGGCTACGATCCAACATGTGGTTTGTATTCAGTTCACATGATTCTTATACGCCCTTTCAATTCAAATATGCAAAGCGTTTCATGCTGGTTCTCTCCCTGGCTTTCTTACCTAAGATTGCCGGCAGTTTTGTTGCCGCTTTAATCCACAAAATGAAACCTTGGAATGCACTGGCTCTGGGAGTAGTCATGAACACCAGAGGCCTAATGGCACTCTTTATTCTCAGCACCGGCAGGGACCTGAAGACCTTGGACCAGAAAACATTCCCAGCAATGATCTTAGTGGTTTGGGCACTGATGATTCCGATCGGACCATTCCTAGCCTACAGTTACAAGACCACCAAGCATTTCGGGCAATACAAATATAGGAACATACGAAGCATAGGATCCGACACAGAGCTTCGCATCCTTGCATGCACCCACGACTCACGCAACTCACCCGCCGTCATCAATCTTCTTGAAGCTTCCAATCCAACCAGACAGTCCCCGATCCAAGTCTTCGCTGTCCAGCTTGTTGAAATGATTGGCCACACTTCCGCCATGCTCATTGTCCATGATGCTTGCAAAACCAACAATGAAGGGAGCAAGCACAAGGCCGGACAAATATCCTCATCCTTGCCCTCCAATCCCTTTGAACTCTACGCAAAGGAAAGAGAGAATGTCCGTGTCCAGGCACTCACCATCGTCTCGGCCTACGCCACAATGCATGAGGACATATGCAACTTTGCGGAGGACAAGTGCATTACCCTTGTGATTGTCCCGTTCCATCAACAATCCACCCTAGACGGAACCATGGAGGAGTCCAACCCTGCTCTCAGGGCAGTCAATAGAAATGTCATTGATAACGCACCATGCTCAGTGGGTGTTCTTGTGGACCGTGGGCTCGGTATATCCCAGATCTTCAAGTCCAACATCAGCAGCCATATTAGCTCCGATGACGTGAGCTACCACCGCTTTGCTGTATTTTTCATTGGAGGGGAAGATGACCGTGAGGCATTAGCGTATGCAAAAAGGATGGCTAGGCATTCCAGGGTTGACCTAACAGTTGTTCGGTTCATCTTAAATACAGAGGCATGCTTAGATGATGCTGACTACGACAACGAAATTATAGAGGCAATGGCAAACACTGGGAGGCAAAAACAGCTTGATGACTTGTACCTGGATGGTTTTAGGGTCCATACAATGCACAATTCCTCCATAAAGTTGGTAGAGGAGGTGGTGAATAGCTGGGAAGAAACTCTGGACGCCATAAACGACATGGAGGGTGATTATGATTTGTACATAATGGGAAGACGACATGGAAGCAGCAGCCCGTTGGCAGTGACATCAGCATTGGACAGCAGCGACTGTGATGAGCTAGGTACTCTGGCAGAGGCGTTGGTGTCTTCTAGCTTTTTTAAGGTTAACACATCTATTCTCATAGTGCAGCAAGGTGCTGCTGTAGAGGAAATACAAGATGAGTCGGATAACCAGGAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002790 GO:0003674 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006897 GO:0006909 GO:0007154 GO:0007155 GO:0007165 GO:0008104 GO:0008150 GO:0008283 GO:0009306 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016192 GO:0022610 GO:0023052 GO:0030587 GO:0031224 GO:0031226 GO:0031589 GO:0032502 GO:0032940 GO:0033036 GO:0033299 GO:0034613 GO:0038023 GO:0042886 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0045184 GO:0046903 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051703 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072657 GO:0090702 GO:0098657 GO:0099120

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EMP70

Protein Analysis

750

Amino Acids

83.25

Weight (kDa)

5.94

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	9 - 358	5.1e-45	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	423 - 554	3e-18	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	577 - 734	3.9e-12	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008677)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08350 AT1G08350 AT1G08350 AT1G08350
fragaria_vesca	FvH4_3g24860 FvH4_3g24860 FvH4_3g24860
prunus_persica	Prupe.6G129500_v2.0.a1 Prupe.6G129500_v2.0.a1
pyrus_communis	pycom11g13620
rosa_chinensis	RchiOBHm_Chr5g0044441
rosa_laevigata	RLG00000034275
rosa_multiflora	Rmu_sc0007129.1_g000001
rosa_roxburghii	Rroxscaffold_1G00036530 Rroxscaffold_3G00244750
rosa_rugosa	Rorug05G0214400 Rorug05G0341800
rosa_samantha	Rh1CG017200 Rh5AG298700 Rh5BG305800 Rh5CG333000 Rh5DG315100
rosa_wichuraiana	Rw5G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	296
AccB7I	CCANNNNNTGG	3 cut(s)	180, 457, 792
AciI	CCGC	8 cut(s)	464, 511, 535, 909, 1212, 1308, 1499, 1723
AclWI	GGATC	6 cut(s)	526, 718, 777, 1152, 1165, 1255
AcoI	YGGCCR	2 cut(s)	165, 1297
AcuI	CTGAAG	1 cut(s)	1034
AcyI	GRCGYC	1 cut(s)	2016
AfaI	GTAC	5 cut(s)	507, 646, 1928, 2051, 2134
AfiI	CCNNNNNNNGG	7 cut(s)	180, 316, 457, 489, 660, 792, 1441
AflII	CTTAAG	2 cut(s)	224, 338
AflIII	ACRYGT	2 cut(s)	75, 789
AgsI	TTSAA	8 cut(s)	26, 101, 833, 838, 1232, 1289, 1406, 1675
AjiI	CACGTC	2 cut(s)	316, 1711
AjnI	CCWGG	7 cut(s)	57, 477, 870, 1440, 1799, 1929, 2241
Alw21I	GWGCWC	3 cut(s)	404, 585, 702
Alw26I	GTCTC	3 cut(s)	246, 561, 1462
AlwI	GGATC	6 cut(s)	526, 718, 777, 1152, 1165, 1255
AlwNI	CAGNNNCTG	1 cut(s)	2118
AoxI	GGCC	9 cut(s)	61, 165, 268, 448, 480, 973, 1297, 1365, 1461
ApeKI	GCWGC	6 cut(s)	1689, 2076, 2079, 2112, 2197, 2207
Asp700I	GAANNNNTTC	1 cut(s)	1034
AspLEI	GCGC	1 cut(s)	623
AspS9I	GGNCC	7 cut(s)	61, 448, 1009, 1024, 1082, 1645, 1945
AsuC2I	CCSGG	1 cut(s)	124
AsuHPI	GGTGA	4 cut(s)	1200, 1441, 2002, 2048
AvaII	GGWCC	5 cut(s)	1009, 1024, 1082, 1645, 1945
BaeGI	GKGCMC	2 cut(s)	286, 1066
BalI	TGGCCA	2 cut(s)	167, 1299
BamHI	GGATCC	1 cut(s)	1157
BanI	GGYRCC	1 cut(s)	296
BanII	GRGCYC	3 cut(s)	585, 702, 1656
BauI	CACGAG	1 cut(s)	403
BbsI	GAAGAC	4 cut(s)	1022, 1261, 2068, 2148
Bbv12I	GWGCWC	3 cut(s)	404, 585, 702
BbvI	GCAGC	6 cut(s)	1701, 2088, 2091, 2124, 2194, 2209
BccI	CCATC	5 cut(s)	176, 1460, 1545, 1780, 1928
BceAI	ACGGC	1 cut(s)	1199
BcgI	CGANNNNNNTGC	4 cut(s)	130, 164, 694, 728
BciT130I	CCWGG	7 cut(s)	59, 479, 872, 1442, 1801, 1931, 2243
BcnI	CCSGG	1 cut(s)	124
BcoDI	GTCTC	3 cut(s)	246, 561, 1462
BfaI	CTAG	8 cut(s)	65, 200, 428, 1091, 1553, 1791, 2129, 2160
BfmI	CTRYAG	3 cut(s)	48, 1096, 2211
BfrI	CTTAAG	2 cut(s)	224, 338
BglII	AGATCT	2 cut(s)	334, 1668
BisI	GCNGC	7 cut(s)	909, 1690, 2077, 2080, 2113, 2198, 2208
BlpI	GCTNAGC	2 cut(s)	35, 701
BlsI	GCNGC	7 cut(s)	910, 1691, 2078, 2081, 2114, 2199, 2209
Bme1390I	CCNGG	8 cut(s)	59, 124, 479, 872, 1442, 1801, 1931, 2243
Bme18I	GGWCC	5 cut(s)	1009, 1024, 1082, 1645, 1945
BmgBI	CACGTC	2 cut(s)	316, 1711
BmgT120I	GGNCC	7 cut(s)	61, 448, 1009, 1024, 1082, 1645, 1945
BmiI	GGNNCC	7 cut(s)	298, 410, 679, 1010, 1159, 1561, 1946
BmrFI	CCNGG	8 cut(s)	59, 124, 479, 872, 1442, 1801, 1931, 2243
BmrI	ACTGGG	2 cut(s)	750, 1908
BmsI	GCATC	4 cut(s)	741, 1185, 1318, 1846
BmuI	ACTGGG	2 cut(s)	750, 1908
BpiI	GAAGAC	4 cut(s)	1022, 1261, 2068, 2148
Bpu1102I	GCTNAGC	2 cut(s)	35, 701
BpuMI	CCSGG	1 cut(s)	124
BsaBI	GATNNNNATC	1 cut(s)	1076
BsaHI	GRCGYC	1 cut(s)	2016
BsaXI	ACNNNNNCTCC	4 cut(s)	1493, 1523, 1949, 1979
Bsc4I	CCNNNNNNNGG	7 cut(s)	180, 316, 457, 489, 660, 792, 1441
Bse118I	RCCGGY	2 cut(s)	893, 1001
Bse1I	ACTGG	5 cut(s)	110, 174, 745, 948, 1903
Bse3DI	GCAATG	3 cut(s)	141, 1050, 1893
Bse8I	GATNNNNATC	1 cut(s)	1076
BseBI	CCWGG	7 cut(s)	59, 479, 872, 1442, 1801, 1931, 2243
BseGI	GGATG	4 cut(s)	1176, 1382, 1791, 1939
BseJI	GATNNNNATC	1 cut(s)	1076
BseLI	CCNNNNNNNGG	7 cut(s)	180, 316, 457, 489, 660, 792, 1441
BseMI	GCAATG	3 cut(s)	141, 1050, 1893
BseMII	CTCAG	6 cut(s)	26, 279, 715, 1009, 1600, 1641
BseNI	ACTGG	5 cut(s)	110, 174, 745, 948, 1903
BseRI	GAGGAG	4 cut(s)	317, 335, 1583, 1997
BseSI	GKGCMC	2 cut(s)	286, 1066
BseXI	GCAGC	6 cut(s)	1701, 2088, 2091, 2124, 2194, 2209
BseYI	CCCAGC	3 cut(s)	514, 1039, 1998
BsgI	GTGCAG	1 cut(s)	2216
Bsh1285I	CGRYCG	1 cut(s)	1080
BshFI	GGCC	9 cut(s)	63, 167, 270, 450, 482, 975, 1299, 1367, 1463
BshNI	GGYRCC	1 cut(s)	296
BsiEI	CGRYCG	1 cut(s)	1080
BsiHKAI	GWGCWC	3 cut(s)	404, 585, 702
BsiSI	CCGG	4 cut(s)	123, 894, 1002, 1368
BslFI	GGGAC	4 cut(s)	480, 1022, 1240, 1514
BslI	CCNNNNNNNGG	7 cut(s)	180, 316, 457, 489, 660, 792, 1441
BsmAI	GTCTC	3 cut(s)	246, 561, 1462
BsmBI	CGTCTC	1 cut(s)	1462
BsmFI	GGGAC	4 cut(s)	480, 1022, 1240, 1514
BsmI	GAATGC	2 cut(s)	943, 1795
BsnI	GGCC	9 cut(s)	63, 167, 270, 450, 482, 975, 1299, 1367, 1463
Bsp1286I	GDGCHC	6 cut(s)	286, 404, 585, 702, 1066, 1656
Bsp1407I	TGTACA	1 cut(s)	2049
Bsp143I	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
Bsp1720I	GCTNAGC	2 cut(s)	35, 701
Bsp19I	CCATGG	1 cut(s)	1563
BspACI	CCGC	8 cut(s)	464, 511, 535, 909, 1212, 1308, 1499, 1723
BspANI	GGCC	9 cut(s)	63, 167, 270, 450, 482, 975, 1299, 1367, 1463
BspCNI	CTCAG	6 cut(s)	27, 278, 714, 1008, 1599, 1640
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	7 cut(s)	298, 410, 679, 1010, 1159, 1561, 1946
BspPI	GGATC	6 cut(s)	526, 718, 777, 1152, 1165, 1255
BspQI	GCTCTTC	1 cut(s)	525
BspT107I	GGYRCC	1 cut(s)	296
BspTI	CTTAAG	2 cut(s)	224, 338
BsrDI	GCAATG	3 cut(s)	141, 1050, 1893
BsrFI	RCCGGY	2 cut(s)	893, 1001
BsrGI	TGTACA	1 cut(s)	2049
BsrI	ACTGG	5 cut(s)	110, 174, 745, 948, 1903
BssAI	RCCGGY	2 cut(s)	893, 1001
BssMI	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
BssNI	GRCGYC	1 cut(s)	2016
BssSI	CACGAG	1 cut(s)	403
BssT1I	CCWWGG	3 cut(s)	932, 1020, 1563
Bst2BI	CACGAG	1 cut(s)	403
Bst2UI	CCWGG	7 cut(s)	59, 479, 872, 1442, 1801, 1931, 2243
Bst4CI	ACNGT	6 cut(s)	1100, 1254, 1649, 1760, 1816, 2120
Bst6I	CTCTTC	1 cut(s)	525
BstACI	GRCGYC	1 cut(s)	2016
BstAFI	CTTAAG	2 cut(s)	224, 338
BstAUI	TGTACA	1 cut(s)	2049
BstC8I	GCNNGC	6 cut(s)	32, 895, 1186, 1333, 1358, 1846
BstDSI	CCRYGG	2 cut(s)	1563, 1648
BstF5I	GGATG	4 cut(s)	1176, 1382, 1791, 1939
BstHHI	GCGC	1 cut(s)	623
BstKTI	GATC	9 cut(s)	337, 534, 726, 785, 1050, 1080, 1160, 1263, 1671
BstMAI	GTCTC	3 cut(s)	246, 561, 1462
BstMBI	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
BstMCI	CGRYCG	1 cut(s)	1080
BstMWI	GCNNNNNNNGC	8 cut(s)	36, 303, 856, 1123, 1589, 1698, 1722, 1912
BstNI	CCWGG	7 cut(s)	59, 479, 872, 1442, 1801, 1931, 2243
BstNSI	RCATGY	4 cut(s)	79, 793, 1188, 1848
BstSCI	CCNGG	8 cut(s)	57, 122, 477, 870, 1440, 1799, 1929, 2241
BstSFI	CTRYAG	3 cut(s)	48, 1096, 2211
BstSLI	GKGCMC	2 cut(s)	286, 1066
BstV1I	GCAGC	6 cut(s)	1701, 2088, 2091, 2124, 2194, 2209
BstV2I	GAAGAC	4 cut(s)	1022, 1261, 2068, 2148
BstX2I	RGATCY	4 cut(s)	334, 723, 1157, 1668
BstXI	CCANNNNNNTGG	1 cut(s)	1975
BstYI	RGATCY	4 cut(s)	334, 723, 1157, 1668
BsuRI	GGCC	9 cut(s)	63, 167, 270, 450, 482, 975, 1299, 1367, 1463
BtgI	CCRYGG	2 cut(s)	1563, 1648
BtgZI	GCGATG	1 cut(s)	154
BtrI	CACGTC	2 cut(s)	316, 1711
BtsCI	GGATG	4 cut(s)	1176, 1382, 1791, 1939
BtsI	GCAGTG	1 cut(s)	2097
BtsIMutI	CAGTG	6 cut(s)	181, 941, 1064, 1635, 1896, 2097
Cac8I	GCNNGC	6 cut(s)	32, 895, 1186, 1333, 1358, 1846
CaiI	CAGNNNCTG	1 cut(s)	2118
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	1 cut(s)	623
Cfr10I	RCCGGY	2 cut(s)	893, 1001
Cfr13I	GGNCC	7 cut(s)	61, 448, 1009, 1024, 1082, 1645, 1945
CseI	GACGC	1 cut(s)	2024
Csp6I	GTAC	5 cut(s)	506, 645, 1927, 2050, 2133
CviQI	GTAC	5 cut(s)	506, 645, 1927, 2050, 2133
DpnI	GATC	9 cut(s)	336, 533, 725, 784, 1049, 1079, 1159, 1262, 1670
DpnII	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
EaeI	YGGCCR	2 cut(s)	165, 1297
Eam1104I	CTCTTC	1 cut(s)	525
EarI	CTCTTC	1 cut(s)	525
EciI	GGCGGA	2 cut(s)	500, 1297
Ecl136II	GAGCTC	2 cut(s)	583, 700
Eco130I	CCWWGG	3 cut(s)	932, 1020, 1563
Eco147I	AGGCCT	1 cut(s)	975
Eco24I	GRGCYC	3 cut(s)	585, 702, 1656
Eco47I	GGWCC	5 cut(s)	1009, 1024, 1082, 1645, 1945
Eco53kI	GAGCTC	2 cut(s)	583, 700
Eco57I	CTGAAG	1 cut(s)	1034
EcoICRI	GAGCTC	2 cut(s)	583, 700
EcoO109I	RGGNCCY	1 cut(s)	1009
EcoRII	CCWGG	7 cut(s)	57, 477, 870, 1440, 1799, 1929, 2241
EcoT14I	CCWWGG	3 cut(s)	932, 1020, 1563
EcoT22I	ATGCAT	1 cut(s)	1479
EcoT38I	GRGCYC	3 cut(s)	585, 702, 1656
ErhI	CCWWGG	3 cut(s)	932, 1020, 1563
Esp3I	CGTCTC	1 cut(s)	1462
FaqI	GGGAC	4 cut(s)	480, 1022, 1240, 1514
FauI	CCCGC	2 cut(s)	457, 1219
FauNDI	CATATG	1 cut(s)	1487
Fnu4HI	GCNGC	7 cut(s)	909, 1690, 2077, 2080, 2113, 2198, 2208
FokI	GGATG	4 cut(s)	1163, 1369, 1798, 1946
FriOI	GRGCYC	3 cut(s)	585, 702, 1656
Fsp4HI	GCNGC	7 cut(s)	909, 1690, 2077, 2080, 2113, 2198, 2208
FspBI	CTAG	8 cut(s)	65, 200, 428, 1091, 1553, 1791, 2129, 2160
GlaI	GCGC	1 cut(s)	622
GluI	GCNGC	7 cut(s)	909, 1690, 2077, 2080, 2113, 2198, 2208
GsaI	CCCAGC	3 cut(s)	518, 1043, 2002
HaeIII	GGCC	9 cut(s)	63, 167, 270, 450, 482, 975, 1299, 1367, 1463
HapII	CCGG	4 cut(s)	123, 894, 1002, 1368
HgaI	GACGC	1 cut(s)	2024
HhaI	GCGC	1 cut(s)	623
Hin1I	GRCGYC	1 cut(s)	2016
Hin6I	GCGC	1 cut(s)	621
HinP1I	GCGC	1 cut(s)	621
HincII	GTYRAC	2 cut(s)	1807, 2176
HindII	GTYRAC	2 cut(s)	1807, 2176
HindIII	AAGCTT	2 cut(s)	304, 1233
HinfI	GANTC	7 cut(s)	324, 635, 815, 1072, 1196, 1571, 2231
HpaI	GTTAAC	1 cut(s)	2176
HpaII	CCGG	4 cut(s)	123, 894, 1002, 1368
HphI	GGTGA	4 cut(s)	1200, 1441, 2002, 2048
Hpy166II	GTNNAC	7 cut(s)	6, 70, 647, 809, 1645, 1807, 2176
Hpy188I	TCNGA	9 cut(s)	234, 355, 394, 444, 1077, 1082, 1162, 1705, 2236
Hpy188III	TCNNGA	3 cut(s)	961, 1229, 2012
Hpy8I	GTNNAC	7 cut(s)	6, 70, 647, 809, 1645, 1807, 2176
Hpy99I	CGWCG	1 cut(s)	776
HpyAV	CCTTC	3 cut(s)	124, 493, 1343
HpyCH4III	ACNGT	6 cut(s)	1100, 1254, 1649, 1760, 1816, 2120
HpyCH4IV	ACGT	3 cut(s)	315, 657, 1710
HpyF10VI	GCNNNNNNNGC	8 cut(s)	36, 303, 856, 1123, 1589, 1698, 1722, 1912
HpySE526I	ACGT	3 cut(s)	315, 657, 1710
Hsp92I	GRCGYC	1 cut(s)	2016
HspAI	GCGC	1 cut(s)	621
KroI	GCCGGC	1 cut(s)	893
KroNI	GCCGGC	1 cut(s)	895
KspAI	GTTAAC	1 cut(s)	2176
Kzo9I	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
LguI	GCTCTTC	1 cut(s)	525
LmnI	GCTCC	6 cut(s)	22, 348, 588, 677, 1353, 1706
Lsp1109I	GCAGC	6 cut(s)	1701, 2088, 2091, 2124, 2194, 2209
LweI	GCATC	4 cut(s)	741, 1185, 1318, 1846
MaeI	CTAG	8 cut(s)	65, 200, 428, 1091, 1553, 1791, 2129, 2160
MaeII	ACGT	3 cut(s)	315, 657, 1710
MaeIII	GTNAC	3 cut(s)	736, 1100, 2092
MalI	GATC	9 cut(s)	336, 533, 725, 784, 1049, 1079, 1159, 1262, 1670
MboI	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
MflI	RGATCY	4 cut(s)	334, 723, 1157, 1668
MhlI	GDGCHC	6 cut(s)	286, 404, 585, 702, 1066, 1656
MlsI	TGGCCA	2 cut(s)	167, 1299
MluCI	AATT	4 cut(s)	707, 833, 1875, 1960
MluNI	TGGCCA	2 cut(s)	167, 1299
MlyI	GAGTC	4 cut(s)	318, 1190, 1580, 2240
MmeI	TCCRAC	8 cut(s)	417, 751, 810, 1185, 1268, 1599, 1704, 2214
Mox20I	TGGCCA	2 cut(s)	167, 1299
Mph1103I	ATGCAT	1 cut(s)	1479
MroNI	GCCGGC	1 cut(s)	893
MroXI	GAANNNNTTC	1 cut(s)	1034
MscI	TGGCCA	2 cut(s)	167, 1299
MseI	TTAA	7 cut(s)	225, 339, 767, 914, 1832, 2169, 2175
MslI	CAYNNNNRTG	1 cut(s)	161
Msp20I	TGGCCA	2 cut(s)	167, 1299
MspCI	CTTAAG	2 cut(s)	224, 338
MspI	CCGG	4 cut(s)	123, 894, 1002, 1368
MspR9I	CCNGG	8 cut(s)	59, 124, 479, 872, 1442, 1801, 1931, 2243
Mva1269I	GAATGC	2 cut(s)	943, 1795
MvaI	CCWGG	7 cut(s)	59, 479, 872, 1442, 1801, 1931, 2243
MwoI	GCNNNNNNNGC	8 cut(s)	36, 303, 856, 1123, 1589, 1698, 1722, 1912
NaeI	GCCGGC	1 cut(s)	895
NciI	CCSGG	1 cut(s)	124
NcoI	CCATGG	1 cut(s)	1563
NdeI	CATATG	1 cut(s)	1487
NdeII	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
NgoMIV	GCCGGC	1 cut(s)	893
NlaIV	GGNNCC	7 cut(s)	298, 410, 679, 1010, 1159, 1561, 1946
NmeAIII	GCCGAG	3 cut(s)	273, 714, 1439
NmuCI	GTSAC	2 cut(s)	736, 2092
NsiI	ATGCAT	1 cut(s)	1479
NspI	RCATGY	4 cut(s)	79, 793, 1188, 1848
PaeI	GCATGC	2 cut(s)	1188, 1848
PagI	TCATGA	1 cut(s)	960
PceI	AGGCCT	1 cut(s)	975
PciI	ACATGT	2 cut(s)	75, 789
PciSI	GCTCTTC	1 cut(s)	525
PcsI	WCGNNNNNNNCGW	1 cut(s)	2022
PctI	GAATGC	2 cut(s)	943, 1795
PdiI	GCCGGC	1 cut(s)	895
PdmI	GAANNNNTTC	1 cut(s)	1034
PfeI	GAWTC	3 cut(s)	635, 815, 1072
PflMI	CCANNNNNTGG	3 cut(s)	180, 457, 792
PkrI	GCNGC	7 cut(s)	910, 1691, 2078, 2081, 2114, 2199, 2209
Ple19I	CGATCG	1 cut(s)	1080
PleI	GAGTC	4 cut(s)	318, 1190, 1579, 2239
PpsI	GAGTC	4 cut(s)	318, 1190, 1579, 2239
PpuMI	RGGWCCY	1 cut(s)	1009
PscI	ACATGT	2 cut(s)	75, 789
Psp124BI	GAGCTC	2 cut(s)	585, 702
Psp5II	RGGWCCY	1 cut(s)	1009
Psp6I	CCWGG	7 cut(s)	57, 477, 870, 1440, 1799, 1929, 2241
PspFI	CCCAGC	3 cut(s)	514, 1039, 1998
PspGI	CCWGG	7 cut(s)	57, 477, 870, 1440, 1799, 1929, 2241
PspN4I	GGNNCC	7 cut(s)	298, 410, 679, 1010, 1159, 1561, 1946
PspPI	GGNCC	7 cut(s)	61, 448, 1009, 1024, 1082, 1645, 1945
PspPPI	RGGWCCY	1 cut(s)	1009
PstNI	CAGNNNCTG	1 cut(s)	2118
PsuI	RGATCY	4 cut(s)	334, 723, 1157, 1668
PvuI	CGATCG	1 cut(s)	1080
RsaI	GTAC	5 cut(s)	507, 646, 1928, 2051, 2134
RsaNI	GTAC	5 cut(s)	506, 645, 1927, 2050, 2133
RseI	CAYNNNNRTG	1 cut(s)	161
SacI	GAGCTC	2 cut(s)	585, 702
SapI	GCTCTTC	1 cut(s)	525
SaqAI	TTAA	7 cut(s)	225, 339, 767, 914, 1832, 2169, 2175
SatI	GCNGC	7 cut(s)	909, 1690, 2077, 2080, 2113, 2198, 2208
Sau3AI	GATC	9 cut(s)	334, 531, 723, 782, 1047, 1077, 1157, 1260, 1668
Sau96I	GGNCC	7 cut(s)	61, 448, 1009, 1024, 1082, 1645, 1945
SchI	GAGTC	4 cut(s)	318, 1190, 1580, 2240
ScrFI	CCNGG	8 cut(s)	59, 124, 479, 872, 1442, 1801, 1931, 2243
SduI	GDGCHC	6 cut(s)	286, 404, 585, 702, 1066, 1656
SfaNI	GCATC	4 cut(s)	741, 1185, 1318, 1846
SfcI	CTRYAG	3 cut(s)	48, 1096, 2211
SinI	GGWCC	5 cut(s)	1009, 1024, 1082, 1645, 1945
SmiMI	CAYNNNNRTG	1 cut(s)	161
SmlI	CTYRAG	2 cut(s)	224, 338
SmoI	CTYRAG	2 cut(s)	224, 338
SphI	GCATGC	2 cut(s)	1188, 1848
Sse9I	AATT	4 cut(s)	707, 833, 1875, 1960
SseBI	AGGCCT	1 cut(s)	975
SsiI	CCGC	8 cut(s)	464, 511, 535, 909, 1212, 1308, 1499, 1723
SspMI	CTAG	8 cut(s)	65, 200, 428, 1091, 1553, 1791, 2129, 2160
SstI	GAGCTC	2 cut(s)	585, 702
StuI	AGGCCT	1 cut(s)	975
StyD4I	CCNGG	8 cut(s)	57, 122, 477, 870, 1440, 1799, 1929, 2241
StyI	CCWWGG	3 cut(s)	932, 1020, 1563
TaaI	ACNGT	6 cut(s)	1100, 1254, 1649, 1760, 1816, 2120
TaiI	ACGT	3 cut(s)	318, 660, 1713
TaqI	TCGA	1 cut(s)	322
TasI	AATT	4 cut(s)	707, 833, 1875, 1960
TatI	WGTACW	2 cut(s)	505, 2049
TauI	GCSGC	1 cut(s)	911
TfiI	GAWTC	3 cut(s)	635, 815, 1072
Tru1I	TTAA	7 cut(s)	225, 339, 767, 914, 1832, 2169, 2175
Tru9I	TTAA	7 cut(s)	225, 339, 767, 914, 1832, 2169, 2175
TscAI	CASTG	6 cut(s)	181, 948, 1071, 1635, 1903, 2097
TseFI	GTSAC	2 cut(s)	736, 2092
TseI	GCWGC	6 cut(s)	1689, 2076, 2079, 2112, 2197, 2207
Tsp45I	GTSAC	2 cut(s)	736, 2092
TspDTI	ATGAA	7 cut(s)	406, 844, 941, 977, 1362, 1729, 1816
TspGWI	ACGGA	3 cut(s)	107, 1424, 1572
TspRI	CASTG	6 cut(s)	181, 948, 1071, 1635, 1903, 2097
Van91I	CCANNNNNTGG	3 cut(s)	180, 457, 792
Vha464I	CTTAAG	2 cut(s)	224, 338
VpaK11BI	GGWCC	5 cut(s)	1009, 1024, 1082, 1645, 1945
XceI	RCATGY	4 cut(s)	79, 793, 1188, 1848
XcmI	CCANNNNNNNNNTGG	3 cut(s)	356, 976, 2026
XmnI	GAANNNNTTC	1 cut(s)	1034
XspI	CTAG	8 cut(s)	65, 200, 428, 1091, 1553, 1791, 2129, 2160
Zsp2I	ATGCAT	1 cut(s)	1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.