Rroxscaffold_3G00253270

Homeobox-leucine zipper protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0013964
Physical Location & Seq
Reverse (-)
47299051 .. 47301100
2050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00253270.1

Sequence Viewer

Length: 960 bp
ATGATGGTTCAAAGAGAAGATTTGGGTCTGAGTCTGAGCTTGAGTGCTTTCCCTCACCAGAATCATAATCCCAACAGCAATAACAATAACAACAACAACAACCTTCAGCTCAATCTCATGCCCTCTTTGGTCCCAACTTCATCTTCATCTCCTCATTCTGGGTTCAATCCTCAAAAGCCCTCTTGGAATGATGCGTTGGCTTCTTCAGATCGAAACTCGGACACGTGTCGCGCCGCGGCCCGGTCCTTCCTCCGGGGCATCGATGTGAACAGGCTGCCGTCGACGGGCGACTGCGAGGACGTGTCGTCGCCGAACAGCACTGTATCAAGCGTGAGCGGGAAGCGAAGCGAGAGAGAGGCCAATGGTGAAGATCTCGACCTCGAAAGAGACGGCTCACGCGGGATGAGTGACGAAGAGGACGGCGAGACCTCGAGAAAGAAGCTCAGGCTCTCCAAGGACCAGTCAGCTATTCTCGAAGAGAGCTTCAAGGAGCACAACACTCTCAACCCTAAGCAAAAGCTGGCTTTGGCTAAGCAGCTCGGGCTCAGGCCTCGACAGGTGGAAGTCTGGTTTCAGAACAGAAGGGCAAGGACTAAGTTGAAGCAAACGGAGGTGGACTGTGAGTTCCTAAAGAGGTGCTGCGAGAATCTGACGGAGGAGAACCGGCGGTTGCAGAAAGAAGTTCAGGAGCTGAGAGCACTGAAACTCTCCCCACAGTTCTACATGCAAATGACCCCACCAACCACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCGGTCCCACCAAACTCCACGTCACCATCCGCCACCGTCGATCCCCGGGCGCATCATCACCACCATCCGATGGTGCCCATCCACCATCCGCGGGCCATCCCGGTCGCCGGCCCGTGGGCCGCCGCCGCCCCCATCCCGCAACAACAACGGCCCTTCGACGCCTTCCGCGCCGCGCGGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009735 GO:0009755 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0010016 GO:0010017 GO:0010022 GO:0010033 GO:0010073 GO:0010154 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010582 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048364 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071365 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071840 GO:0080090 GO:0080127 GO:0090567 GO:0097159 GO:0099402 GO:0104004 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905328 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HALZ HD-ZIP_N Homeobox

Protein Analysis

319

Amino Acids

35.69

Weight (kDa)

8.7

Isoelectric Point (pI)

59.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HD-ZIP_N PF04618 2 - 119 2.4e-28 HD-ZIP protein N terminus
Homeodomain PF00046 145 - 199 4.5e-16 Homeodomain
HALZ PF02183 201 - 235 2.5e-11 Homeobox associated leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16780
fragaria_vesca FvH4_5g19570
malus_domestica MD04G1061200.v1.1 MD06G1054800.v1.1
prunus_persica Prupe.5G064300_v2.0.a1
pyrus_communis pycom04g05500 pycom06g04580
rosa_chinensis RchiOBHm_Chr7g0204271
rosa_laevigata RLG00000003479
rosa_multiflora Rmu_sc0004975.1_g000005
rosa_roxburghii Rroxscaffold_3G00253270
rosa_rugosa Rorug07G0081500
rosa_samantha Rh7AG212100 Rh7BG210300 Rh7CG224200 Rh7DG219000
rosa_wichuraiana Rw7G018390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 850
AccB7I CCANNNNNTGG 1 cut(s) 847
AccBSI CCGCTC 1 cut(s) 336
AccI GTMKAC 1 cut(s) 281
AccII CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
AclWI GGATC 1 cut(s) 812
AcoI YGGCCR 1 cut(s) 953
AcuI CTGAAG 2 cut(s) 89, 189
AcvI CACGTG 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 936
AdeI CACNNNGTG 1 cut(s) 756
AfiI CCNNNNNNNGG 8 cut(s) 158, 240, 252, 284, 847, 868, 884, 891
AflIII ACRYGT 3 cut(s) 222, 224, 300
AgsI TTSAA 4 cut(s) 11, 166, 487, 601
AhdI GACNNNNNGTC 1 cut(s) 304
AjiI CACGTC 2 cut(s) 301, 798
AjuI GAANNNNNNNTTGG 4 cut(s) 127, 159, 179, 211
AloI GAACNNNNNNTCC 2 cut(s) 608, 640
AluBI AGCT 8 cut(s) 39, 109, 442, 467, 483, 520, 538, 691
AluI AGCT 8 cut(s) 39, 109, 442, 467, 483, 520, 538, 691
Alw21I GWGCWC 2 cut(s) 495, 700
Alw26I GTCTC 2 cut(s) 381, 419
AlwI GGATC 1 cut(s) 812
AlwNI CAGNNNCTG 1 cut(s) 691
Ama87I CYCGRG 3 cut(s) 430, 539, 822
AoxI GGCC 8 cut(s) 237, 357, 548, 870, 886, 894, 926, 953
ApeKI GCWGC 3 cut(s) 274, 535, 639
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
AspLEI GCGC 4 cut(s) 233, 829, 947, 952
AspS9I GGNCC 9 cut(s) 130, 238, 243, 457, 781, 870, 887, 894, 927
AsuC2I CCSGG 5 cut(s) 241, 254, 823, 824, 878
AsuHPI GGTGA 5 cut(s) 47, 377, 742, 792, 827
AvaI CYCGRG 3 cut(s) 430, 539, 822
AvaII GGWCC 4 cut(s) 130, 243, 457, 781
BaeGI GKGCMC 2 cut(s) 761, 855
BanI GGYRCC 1 cut(s) 850
BanII GRGCYC 1 cut(s) 546
BauI CACGAG 1 cut(s) 763
BbrPI CACGTG 1 cut(s) 225
Bbv12I GWGCWC 2 cut(s) 495, 700
BbvI GCAGC 3 cut(s) 261, 547, 626
BccI CCATC 7 cut(s) 811, 841, 849, 863, 870, 881, 917
BceAI ACGGC 5 cut(s) 262, 406, 436, 940, 941
BcnI CCSGG 5 cut(s) 241, 254, 823, 824, 878
BcoDI GTCTC 2 cut(s) 381, 419
BglII AGATCT 1 cut(s) 370
BlpI GCTNAGC 1 cut(s) 531
Bme1390I CCNGG 5 cut(s) 241, 254, 823, 824, 878
Bme18I GGWCC 4 cut(s) 130, 243, 457, 781
BmeRI GACNNNNNGTC 1 cut(s) 304
BmeT110I CYCGRG 3 cut(s) 430, 539, 822
BmgBI CACGTC 2 cut(s) 301, 798
BmgT120I GGNCC 9 cut(s) 130, 238, 243, 457, 781, 870, 887, 894, 927
BmiI GGNNCC 3 cut(s) 132, 783, 852
BmrFI CCNGG 5 cut(s) 241, 254, 823, 824, 878
BmsI GCATC 3 cut(s) 181, 267, 838
BoxI GACNNNNGTC 1 cut(s) 225
Bpu10I CCTNAGC 3 cut(s) 443, 510, 545
Bpu1102I GCTNAGC 1 cut(s) 531
BpuEI CTTGAG 1 cut(s) 61
BpuMI CCSGG 5 cut(s) 241, 254, 823, 824, 878
Bsa29I ATCGAT 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 225
BsaHI GRCGYC 1 cut(s) 936
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 7 cut(s) 234, 253, 453, 821, 822, 866, 890
Bsc4I CCNNNNNNNGG 8 cut(s) 158, 240, 252, 284, 847, 868, 884, 891
Bse118I RCCGGY 2 cut(s) 663, 884
Bse1I ACTGG 1 cut(s) 460
BseCI ATCGAT 1 cut(s) 261
BseDI CCNNGG 7 cut(s) 234, 253, 453, 821, 822, 866, 890
BseGI GGATG 7 cut(s) 408, 803, 841, 855, 862, 873, 909
BseLI CCNNNNNNNGG 8 cut(s) 158, 240, 252, 284, 847, 868, 884, 891
BseMII CTCAG 5 cut(s) 20, 26, 457, 559, 683
BseNI ACTGG 1 cut(s) 460
BseRI GAGGAG 2 cut(s) 141, 671
BseSI GKGCMC 2 cut(s) 761, 855
BseX3I CGGCCG 1 cut(s) 953
BseXI GCAGC 3 cut(s) 261, 547, 626
Bsh1236I CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
Bsh1285I CGRYCG 2 cut(s) 882, 956
BshFI GGCC 8 cut(s) 239, 359, 550, 872, 888, 896, 928, 955
BshNI GGYRCC 1 cut(s) 850
BshVI ATCGAT 1 cut(s) 261
BsiEI CGRYCG 2 cut(s) 882, 956
BsiHKAI GWGCWC 2 cut(s) 495, 700
BsiHKCI CYCGRG 3 cut(s) 430, 539, 822
BsiSI CCGG 6 cut(s) 241, 253, 664, 823, 878, 885
BslFI GGGAC 2 cut(s) 116, 767
BslI CCNNNNNNNGG 8 cut(s) 158, 240, 252, 284, 847, 868, 884, 891
BsmAI GTCTC 2 cut(s) 381, 419
BsmBI CGTCTC 1 cut(s) 381
BsmFI GGGAC 2 cut(s) 116, 767
BsnI GGCC 8 cut(s) 239, 359, 550, 872, 888, 896, 928, 955
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 3 cut(s) 430, 539, 822
Bsp1286I GDGCHC 5 cut(s) 495, 546, 700, 761, 855
Bsp143I GATC 3 cut(s) 208, 370, 817
Bsp1720I GCTNAGC 1 cut(s) 531
BspANI GGCC 8 cut(s) 239, 359, 550, 872, 888, 896, 928, 955
BspCNI CTCAG 5 cut(s) 21, 27, 456, 558, 684
BspDI ATCGAT 1 cut(s) 261
BspFNI CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
BspLI GGNNCC 3 cut(s) 132, 783, 852
BspPI GGATC 1 cut(s) 812
BspT107I GGYRCC 1 cut(s) 850
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 1 cut(s) 336
BsrFI RCCGGY 2 cut(s) 663, 884
BsrI ACTGG 1 cut(s) 460
BssAI RCCGGY 2 cut(s) 663, 884
BssECI CCNNGG 7 cut(s) 234, 253, 453, 821, 822, 866, 890
BssMI GATC 3 cut(s) 208, 370, 817
BssNI GRCGYC 1 cut(s) 936
BssSI CACGAG 1 cut(s) 763
BssT1I CCWWGG 1 cut(s) 453
Bst2BI CACGAG 1 cut(s) 763
Bst4CI ACNGT 4 cut(s) 322, 620, 717, 814
Bst6I CTCTTC 2 cut(s) 408, 471
BstACI GRCGYC 1 cut(s) 936
BstBAI YACGTR 1 cut(s) 225
BstC8I GCNNGC 3 cut(s) 522, 870, 886
BstDEI CTNAG 8 cut(s) 29, 35, 443, 510, 531, 545, 594, 692
BstDSI CCRYGG 3 cut(s) 234, 866, 890
BstF5I GGATG 7 cut(s) 408, 803, 841, 855, 862, 873, 909
BstFNI CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
BstHHI GCGC 4 cut(s) 233, 829, 947, 952
BstKTI GATC 3 cut(s) 211, 373, 820
BstMAI GTCTC 2 cut(s) 381, 419
BstMBI GATC 3 cut(s) 208, 370, 817
BstMCI CGRYCG 2 cut(s) 882, 956
BstMWI GCNNNNNNNGC 3 cut(s) 541, 902, 944
BstNSI RCATGY 1 cut(s) 727
BstPAI GACNNNNGTC 1 cut(s) 225
BstSCI CCNGG 5 cut(s) 239, 252, 821, 822, 876
BstSLI GKGCMC 2 cut(s) 761, 855
BstUI CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
BstV1I GCAGC 3 cut(s) 261, 547, 626
BstX2I RGATCY 1 cut(s) 370
BstYI RGATCY 1 cut(s) 370
BstZI CGGCCG 1 cut(s) 953
Bsu15I ATCGAT 1 cut(s) 261
BsuRI GGCC 8 cut(s) 239, 359, 550, 872, 888, 896, 928, 955
BsuTUI ATCGAT 1 cut(s) 261
BtgI CCRYGG 3 cut(s) 234, 866, 890
BtrI CACGTC 2 cut(s) 301, 798
BtsCI GGATG 7 cut(s) 408, 803, 841, 855, 862, 873, 909
BtsIMutI CAGTG 2 cut(s) 318, 698
Cac8I GCNNGC 3 cut(s) 522, 870, 886
CaiI CAGNNNCTG 1 cut(s) 691
CfoI GCGC 4 cut(s) 233, 829, 947, 952
Cfr10I RCCGGY 2 cut(s) 663, 884
Cfr13I GGNCC 9 cut(s) 130, 238, 243, 457, 781, 870, 887, 894, 927
Cfr42I CCGCGG 2 cut(s) 237, 869
Cfr9I CCCGGG 1 cut(s) 822
ClaI ATCGAT 1 cut(s) 261
CseI GACGC 1 cut(s) 944
CviAII CATG 3 cut(s) 118, 724, 754
DdeI CTNAG 8 cut(s) 29, 35, 443, 510, 531, 545, 594, 692
DpnI GATC 3 cut(s) 210, 372, 819
DpnII GATC 3 cut(s) 208, 370, 817
DraIII CACNNNGTG 1 cut(s) 756
DriI GACNNNNNGTC 1 cut(s) 304
EaeI YGGCCR 1 cut(s) 953
EagI CGGCCG 1 cut(s) 953
Eam1104I CTCTTC 2 cut(s) 408, 471
Eam1105I GACNNNNNGTC 1 cut(s) 304
EarI CTCTTC 2 cut(s) 408, 471
EciI GGCGGA 1 cut(s) 796
EclXI CGGCCG 1 cut(s) 953
Eco130I CCWWGG 1 cut(s) 453
Eco147I AGGCCT 1 cut(s) 550
Eco24I GRGCYC 1 cut(s) 546
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 4 cut(s) 130, 243, 457, 781
Eco52I CGGCCG 1 cut(s) 953
Eco57I CTGAAG 2 cut(s) 89, 189
Eco72I CACGTG 1 cut(s) 225
Eco88I CYCGRG 3 cut(s) 430, 539, 822
EcoT14I CCWWGG 1 cut(s) 453
EcoT38I GRGCYC 1 cut(s) 546
ErhI CCWWGG 1 cut(s) 453
Esp3I CGTCTC 1 cut(s) 381
FaeI CATG 3 cut(s) 121, 727, 757
FaiI YATR 4 cut(s) 66, 119, 725, 755
FaqI GGGAC 2 cut(s) 116, 767
FatI CATG 3 cut(s) 117, 723, 753
FauI CCCGC 4 cut(s) 329, 392, 861, 921
FblI GTMKAC 1 cut(s) 281
FokI GGATG 7 cut(s) 415, 790, 828, 842, 849, 860, 896
FriOI GRGCYC 1 cut(s) 546
GlaI GCGC 4 cut(s) 232, 828, 946, 951
HaeIII GGCC 8 cut(s) 239, 359, 550, 872, 888, 896, 928, 955
HapII CCGG 6 cut(s) 241, 253, 664, 823, 878, 885
HgaI GACGC 1 cut(s) 944
HhaI GCGC 4 cut(s) 233, 829, 947, 952
Hin1I GRCGYC 1 cut(s) 936
Hin1II CATG 3 cut(s) 121, 727, 757
Hin6I GCGC 4 cut(s) 231, 827, 945, 950
HinP1I GCGC 4 cut(s) 231, 827, 945, 950
HincII GTYRAC 1 cut(s) 282
HindII GTYRAC 1 cut(s) 282
HinfI GANTC 3 cut(s) 31, 61, 646
HpaII CCGG 6 cut(s) 241, 253, 664, 823, 878, 885
HphI GGTGA 5 cut(s) 47, 377, 742, 792, 827
Hpy166II GTNNAC 3 cut(s) 268, 282, 616
Hpy188I TCNGA 7 cut(s) 30, 36, 208, 220, 576, 651, 846
Hpy188III TCNNGA 4 cut(s) 374, 432, 473, 686
Hpy8I GTNNAC 3 cut(s) 268, 282, 616
Hpy99I CGWCG 5 cut(s) 283, 286, 310, 818, 938
HpyAV CCTTC 5 cut(s) 113, 256, 576, 940, 949
HpyCH4III ACNGT 4 cut(s) 322, 620, 717, 814
HpyCH4IV ACGT 3 cut(s) 224, 300, 797
HpyCH4V TGCA 2 cut(s) 673, 727
HpyF10VI GCNNNNNNNGC 3 cut(s) 541, 902, 944
HpyF3I CTNAG 8 cut(s) 29, 35, 443, 510, 531, 545, 594, 692
HpySE526I ACGT 3 cut(s) 224, 300, 797
Hsp92I GRCGYC 1 cut(s) 936
Hsp92II CATG 3 cut(s) 121, 727, 757
HspAI GCGC 4 cut(s) 231, 827, 945, 950
KroI GCCGGC 1 cut(s) 884
KroNI GCCGGC 1 cut(s) 886
KspI CCGCGG 2 cut(s) 237, 869
Kzo9I GATC 3 cut(s) 208, 370, 817
LmnI GCTCC 2 cut(s) 490, 688
Lsp1109I GCAGC 3 cut(s) 261, 547, 626
LweI GCATC 3 cut(s) 181, 267, 838
MaeII ACGT 3 cut(s) 224, 300, 797
MaeIII GTNAC 2 cut(s) 407, 798
MalI GATC 3 cut(s) 210, 372, 819
MbiI CCGCTC 1 cut(s) 336
MboI GATC 3 cut(s) 208, 370, 817
MboII GAAGA 6 cut(s) 29, 135, 195, 380, 425, 488
MflI RGATCY 1 cut(s) 370
MhlI GDGCHC 5 cut(s) 495, 546, 700, 761, 855
MlyI GAGTC 1 cut(s) 40
MroNI GCCGGC 1 cut(s) 884
MslI CAYNNNNRTG 2 cut(s) 263, 728
MspA1I CMGCKG 2 cut(s) 236, 868
MspI CCGG 6 cut(s) 241, 253, 664, 823, 878, 885
MspR9I CCNGG 5 cut(s) 241, 254, 823, 824, 878
MteI GCGCNGCGC 1 cut(s) 948
MvnI CGCG 8 cut(s) 231, 236, 399, 779, 868, 945, 950, 952
MwoI GCNNNNNNNGC 3 cut(s) 541, 902, 944
NaeI GCCGGC 1 cut(s) 886
NciI CCSGG 5 cut(s) 241, 254, 823, 824, 878
NdeII GATC 3 cut(s) 208, 370, 817
NgoMIV GCCGGC 1 cut(s) 884
NlaIII CATG 3 cut(s) 121, 727, 757
NlaIV GGNNCC 3 cut(s) 132, 783, 852
NmuCI GTSAC 2 cut(s) 407, 798
NspI RCATGY 1 cut(s) 727
PaeR7I CTCGAG 1 cut(s) 430
PceI AGGCCT 1 cut(s) 550
PdiI GCCGGC 1 cut(s) 886
PfeI GAWTC 2 cut(s) 61, 646
PflMI CCANNNNNTGG 1 cut(s) 847
PleI GAGTC 1 cut(s) 39
PmaCI CACGTG 1 cut(s) 225
PmlI CACGTG 1 cut(s) 225
PpsI GAGTC 1 cut(s) 39
Ppu21I YACGTR 1 cut(s) 225
PshAI GACNNNNGTC 1 cut(s) 225
PspCI CACGTG 1 cut(s) 225
PspN4I GGNNCC 3 cut(s) 132, 783, 852
PspPI GGNCC 9 cut(s) 130, 238, 243, 457, 781, 870, 887, 894, 927
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 1 cut(s) 370
RseI CAYNNNNRTG 2 cut(s) 263, 728
SacII CCGCGG 2 cut(s) 237, 869
SalI GTCGAC 1 cut(s) 280
Sau3AI GATC 3 cut(s) 208, 370, 817
Sau96I GGNCC 9 cut(s) 130, 238, 243, 457, 781, 870, 887, 894, 927
SchI GAGTC 1 cut(s) 40
ScrFI CCNGG 5 cut(s) 241, 254, 823, 824, 878
SduI GDGCHC 5 cut(s) 495, 546, 700, 761, 855
SfaNI GCATC 3 cut(s) 181, 267, 838
Sfr274I CTCGAG 1 cut(s) 430
Sfr303I CCGCGG 2 cut(s) 237, 869
SgrBI CCGCGG 2 cut(s) 237, 869
SgrDI CGTCGACG 1 cut(s) 280
SinI GGWCC 4 cut(s) 130, 243, 457, 781
SlaI CTCGAG 1 cut(s) 430
SmaI CCCGGG 1 cut(s) 824
SmiMI CAYNNNNRTG 2 cut(s) 263, 728
SmlI CTYRAG 2 cut(s) 40, 430
SmoI CTYRAG 2 cut(s) 40, 430
SseBI AGGCCT 1 cut(s) 550
StuI AGGCCT 1 cut(s) 550
StyD4I CCNGG 5 cut(s) 239, 252, 821, 822, 876
StyI CCWWGG 1 cut(s) 453
TaaI ACNGT 4 cut(s) 322, 620, 717, 814
TaiI ACGT 3 cut(s) 227, 303, 800
TauI GCSGC 7 cut(s) 236, 239, 899, 902, 905, 950, 955
TfiI GAWTC 2 cut(s) 61, 646
TscAI CASTG 2 cut(s) 325, 705
TseFI GTSAC 2 cut(s) 407, 798
TseI GCWGC 3 cut(s) 274, 535, 639
Tsp45I GTSAC 2 cut(s) 407, 798
TspDTI ATGAA 2 cut(s) 129, 135
TspGWI ACGGA 2 cut(s) 623, 668
TspMI CCCGGG 1 cut(s) 822
TspRI CASTG 2 cut(s) 325, 705
Van91I CCANNNNNTGG 1 cut(s) 847
VpaK11BI GGWCC 4 cut(s) 130, 243, 457, 781
XceI RCATGY 1 cut(s) 727
XhoI CTCGAG 1 cut(s) 430
XmaI CCCGGG 1 cut(s) 822
XmiI GTMKAC 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.