Rorug07G0081500

Homeobox-leucine zipper protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0003415
Physical Location & Seq
Forward (+)
6404774 .. 6410550
5777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0081500.1

Sequence Viewer

Length: 2376 bp
ATGAAGTACAAGAAGTCTAGCAACTCTGTGGTTAGAGAACCTGCACCAAATGTTTCTCTTGCGACAGACTGTACTGTTGAAAATCACTCTTCAGAAGCCTTACTTTCTGATAGGTCTAAAAAGATTGATGATGGGCTGAAGGAAGACAAGGTGGAACACCAAGTTTCTGCAGTGCCGGGGCACATGACTATCACCAAAATGGATGGTGCTGCTGTTGCATCATTGTTAGAATTAAATGATGCTAGGACTGATTGTCTACAAGAACAGGGAGATAGCACAGAAGATGAAAATTTGAATGTGAAACCACCCATTGAAAATGTTAGCACTGCACCGGAGGTTGAAGTTCAGAATCACTGTCCTACTAGCGACGGGTCCGTACAACGTTCTCCCAATAAGAAAACTGAAGACCATGAGGACAATTCTCAGAGCCCGGTGAATGTGCAGTCTTCTCTTCATGGTGAGGCAAAAGATCTCGGCAAATCTTCTGATCAAGTGTCTGAAAGTTCGAAACTTAATGGTGTAATAGTAAACATCCCACTGTCCAGTGACCATAAGGTGCAAGGTGCTGACAGAACTTCTGAAGCAGTTAGTGATTCTCATACAGAGAGGGGTGATGAATTATCTGGTGATTGCCAGCCTAAACGGGAATCAGAAGATTTGGCGGATTCAGTTACTCTGCAAAAATGTTCTTCAGATGTCAAACATGGTTTGAAGCTTTCAGAAGATCTTTCAAAATCAGGCGGGATCTTAAACTCTGCAGCAGCACCGGGTCAGCTTAAAACAGCAAGTGCTGGGAAATCTTGTACTGTTCCATCCACCAGTTTGACCCCCAAATCATCCACTCCTCAGAACTTAAAATCTGGTGATGTTCAGAATCCTAATCCATTTACTAAGCAGCAAATAATGTCTGAAAGTAAAGTTAGCATTAAGAAAGATTGTGCTTCATCCGCGGACATGGATCACGATAAGGACAATATGCCAAGGAAAATAGTAAAAGAGCAGTTAAGATCCCCTACAAGTTCTGCTCTGAAAGCCTCACACTTCAGCAGGAATTCACATGATTCTGTATCCAAGCGGACCACATCAGAATCAAAAGATTCATTGCTTCACTCATCTTCCAAGACATTGTCTGAAGGGGATACTGCAGTTCCTTCAGGCTCTAGTGAGAAGGTTTTACATGGGCAGAACAAAAGTTCAGCGTCAAGTGCATTGCAAAGAGGTGAAAAGTTAAACCAGACAACTTCTTCTAAGACTAGTCAGAGTCATGCACCACCTTCTTGTCCACCTGCACCATCAAGTTCTCAAGCAAAACTAAGTGATGAGGAACTCGCTTTACTTTTACATCAAGAACTCAACAGTTCTCCCAGAGTACCTCGTGTACCACGTGCTCGTCATGCGTCTAGCTTACCTCAGCTGGCTTCTCCAACTGCAACAAGCATGTTAATAAAGCGTACATCTTCTTCTAGCGGAAAGGATCACAACTCGGGCTCTAGAAGAAAAGTGAGGGATGCATATAAAGATGGGGTCCGAAGTTCCCGTGAACTGGATGATGAAACTAAGAGGATGGACAGAGTCCCATCTTCTCCTGATCCTAGAAGACAAGATGCAGCTAGTACAGTAGATGCTACTAGGAGGGAGGAAAATGCATCTTCAACAGCCTCACATTCTTACAAAAAGACTATCCCTTCTACCCCCATTCCAACTGCAAACAGTGGTCCATCTTCATCCACTGAGGCTAATGATCGCAATGTGTCATCAGTACGCAGTTCACCGAGGAATGCGTCCGATGATGATACAGGGGCAGTTGGTCCTGTTCATCCTACTTTACCAGGCTTGATAAATGAGATTATGAGTAAAGGTAGACGAATGACGTATGAGGAGCTCTGCAATGCTGTGATGCCGCACTGGCATAATCTGAGAAAGCACAATGGAGAGCGTTATGCATATACAAGTCCTTCGCAGGCTGTTCTTGATTGCCTTCGGAATCGACATGAATGGGCTCGATTAGTTGATCGTGGTCCGAAGACGAACCCTAGGAAAAAGCGAAAACTTGATGCTGATGATTCAGAGGATAATGAATATGGCAGGGTCAACAATCCAAAGGAGTTGGAAGGTAAAAGCATAGAGACACAGAGAGAGGACTATCCAAAGGGCAAGAGAAAAGCTCGAAAGCGCAGAAGACTGGCCCTTCAAGGAAGAGGAATAAAGGATGTCAGGGAGAAACGGAAGGCAGATTTGCTCACCGATGATGATGTAGGGCCATCATTTTCTAATTCCACAGAGGAAACTGTGTCTGAGGATGATATTCAGGGAGGTGGAGCAGGTCCAATTGGAAGTGAGGCCTCTTCTAGTTCAGAGGAGGAAGGGACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009735 GO:0009755 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0010016 GO:0010017 GO:0010022 GO:0010033 GO:0010073 GO:0010154 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010582 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048364 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071365 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071840 GO:0080090 GO:0080127 GO:0090567 GO:0097159 GO:0099402 GO:0104004 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905328 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HALZ HD-ZIP_N Homeobox

Protein Analysis

791

Amino Acids

85.49

Weight (kDa)

6.8

Isoelectric Point (pI)

61.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7648 PF24659 608 - 670 3.1e-34 Domain of unknown function (DUF7648)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1294
Acc36I ACCTGC 3 cut(s) 49, 1294, 2312
AccI GTMKAC 2 cut(s) 256, 1861
AccII CGCG 1 cut(s) 950
AciI CCGC 7 cut(s) 662, 741, 948, 950, 1075, 1467, 1901
AclI AACGTT 1 cut(s) 382
AclWI GGATC 5 cut(s) 752, 966, 1002, 1482, 1583
AcsI RAATTY 2 cut(s) 289, 1051
AcuI CTGAAG 8 cut(s) 75, 158, 423, 600, 675, 1027, 1137, 1152
AcvI CACGTG 1 cut(s) 1385
AfaI GTAC 9 cut(s) 8, 73, 378, 805, 1371, 1380, 1453, 1615, 1761
AfiI CCNNNNNNNGG 1 cut(s) 1543
AgsI TTSAA 8 cut(s) 80, 295, 314, 341, 712, 732, 1653, 2192
AhdI GACNNNNNGTC 1 cut(s) 252
AhlI ACTAGT 1 cut(s) 1253
AjnI CCWGG 1 cut(s) 1828
AluBI AGCT 7 cut(s) 715, 775, 1404, 1414, 1610, 1882, 2165
AluI AGCT 7 cut(s) 715, 775, 1404, 1414, 1610, 1882, 2165
Alw21I GWGCWC 2 cut(s) 1390, 1884
Alw26I GTCTC 1 cut(s) 2120
AlwI GGATC 5 cut(s) 752, 966, 1002, 1482, 1583
Ama87I CYCGRG 1 cut(s) 1483
AoxI GGCC 3 cut(s) 2184, 2258, 2340
ApeKI GCWGC 5 cut(s) 209, 758, 761, 895, 1607
ApoI RAATTY 2 cut(s) 289, 1051
AspA2I CCTAGG 1 cut(s) 2033
AspLEI GCGC 1 cut(s) 2175
AspS9I GGNCC 9 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2185, 2258, 2324
AsuC2I CCSGG 3 cut(s) 177, 431, 768
AsuHPI GGTGA 9 cut(s) 184, 445, 470, 623, 638, 875, 1232, 1761, 2233
AsuII TTCGAA 1 cut(s) 506
AvaI CYCGRG 1 cut(s) 1483
AvaII GGWCC 7 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2324
AvrII CCTAGG 1 cut(s) 2033
BaeGI GKGCMC 1 cut(s) 183
BaeI ACNNNNGTAYC 2 cut(s) 1131, 1164
BanII GRGCYC 4 cut(s) 431, 1490, 1884, 2002
BarI GAAGNNNNNNTAC 2 cut(s) 1444, 1476
BauI CACGAG 1 cut(s) 1374
BbrPI CACGTG 1 cut(s) 1385
BbsI GAAGAC 6 cut(s) 150, 411, 438, 1603, 2030, 2185
Bbv12I GWGCWC 2 cut(s) 1390, 1884
BbvCI CCTCAGC 1 cut(s) 1410
BbvI GCAGC 5 cut(s) 196, 770, 773, 907, 1619
BccI CCATC 9 cut(s) 125, 197, 820, 1300, 1514, 1558, 1585, 1726, 2269
BciT130I CCWGG 1 cut(s) 1830
BciVI GTATCC 2 cut(s) 1078, 1132
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 3 cut(s) 177, 431, 768
BcoDI GTCTC 1 cut(s) 2120
BcuI ACTAGT 1 cut(s) 1253
BfmI CTRYAG 3 cut(s) 168, 756, 1143
BfuAI ACCTGC 3 cut(s) 49, 1294, 2312
BfuI GTATCC 2 cut(s) 1078, 1132
BglI GCCNNNNNGGC 1 cut(s) 1906
BglII AGATCT 2 cut(s) 469, 724
BisI GCNGC 6 cut(s) 210, 759, 762, 896, 1608, 1901
BlnI CCTAGG 1 cut(s) 2033
BlsI GCNGC 6 cut(s) 211, 760, 763, 897, 1609, 1902
Bme1390I CCNGG 4 cut(s) 177, 431, 768, 1830
Bme18I GGWCC 7 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2324
BmeRI GACNNNNNGTC 1 cut(s) 252
BmeT110I CYCGRG 1 cut(s) 1483
BmgT120I GGNCC 9 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2185, 2258, 2324
BmiI GGNNCC 2 cut(s) 373, 1526
BmrFI CCNGG 4 cut(s) 177, 431, 768, 1830
BmsI GCATC 8 cut(s) 227, 229, 1498, 1594, 1612, 1655, 1887, 2044
BpiI GAAGAC 6 cut(s) 150, 411, 438, 1603, 2030, 2185
BplI GAGNNNNNCTC 2 cut(s) 2149, 2181
Bpu10I CCTNAGC 1 cut(s) 1410
Bpu14I TTCGAA 1 cut(s) 506
BpuEI CTTGAG 1 cut(s) 1287
BpuMI CCSGG 3 cut(s) 177, 431, 768
BsaAI YACGTR 1 cut(s) 1385
BsaJI CCNNGG 5 cut(s) 176, 948, 980, 1772, 2033
BsaWI WCCGGW 1 cut(s) 331
Bsc4I CCNNNNNNNGG 1 cut(s) 1543
Bse1I ACTGG 5 cut(s) 543, 819, 1548, 1910, 2187
Bse3DI GCAATG 4 cut(s) 1100, 1208, 1753, 1894
BseBI CCWGG 1 cut(s) 1830
BseDI CCNNGG 5 cut(s) 176, 948, 980, 1772, 2033
BseLI CCNNNNNNNGG 1 cut(s) 1543
BseMI GCAATG 4 cut(s) 1100, 1208, 1753, 1894
BseMII CTCAG 6 cut(s) 437, 860, 1424, 1722, 1907, 2286
BseNI ACTGG 5 cut(s) 543, 819, 1548, 1910, 2187
BseRI GAGGAG 3 cut(s) 834, 1892, 2372
BseSI GKGCMC 1 cut(s) 183
BseXI GCAGC 5 cut(s) 196, 770, 773, 907, 1619
BseYI CCCAGC 1 cut(s) 791
BsgI GTGCAG 4 cut(s) 27, 312, 461, 1272
Bsh1236I CGCG 1 cut(s) 950
BshFI GGCC 3 cut(s) 2186, 2260, 2342
BsiHKAI GWGCWC 2 cut(s) 1390, 1884
BsiHKCI CYCGRG 1 cut(s) 1483
BsiSI CCGG 4 cut(s) 176, 332, 431, 767
BslFI GGGAC 1 cut(s) 1559
BslI CCNNNNNNNGG 1 cut(s) 1543
BsmAI GTCTC 1 cut(s) 2120
BsmFI GGGAC 1 cut(s) 1559
BsmI GAATGC 1 cut(s) 1783
BsnI GGCC 3 cut(s) 2186, 2260, 2342
BsoBI CYCGRG 1 cut(s) 1483
Bsp119I TTCGAA 1 cut(s) 506
Bsp1286I GDGCHC 6 cut(s) 183, 431, 1390, 1490, 1884, 2002
BspACI CCGC 7 cut(s) 662, 741, 948, 950, 1075, 1467, 1901
BspANI GGCC 3 cut(s) 2186, 2260, 2342
BspCNI CTCAG 6 cut(s) 436, 859, 1423, 1723, 1908, 2287
BspFNI CGCG 1 cut(s) 950
BspLI GGNNCC 2 cut(s) 373, 1526
BspMAI CTGCAG 3 cut(s) 172, 760, 1147
BspMI ACCTGC 3 cut(s) 49, 1294, 2312
BspPI GGATC 5 cut(s) 752, 966, 1002, 1482, 1583
BspT104I TTCGAA 1 cut(s) 506
BsrDI GCAATG 4 cut(s) 1100, 1208, 1753, 1894
BsrI ACTGG 5 cut(s) 543, 819, 1548, 1910, 2187
BssECI CCNNGG 5 cut(s) 176, 948, 980, 1772, 2033
BssSI CACGAG 1 cut(s) 1374
BssT1I CCWWGG 2 cut(s) 980, 2033
Bst2BI CACGAG 1 cut(s) 1374
Bst2UI CCWGG 1 cut(s) 1830
Bst4CI ACNGT 9 cut(s) 71, 76, 356, 540, 808, 1358, 1618, 1712, 2290
Bst6I CTCTTC 4 cut(s) 94, 456, 2191, 2350
BstBAI YACGTR 1 cut(s) 1385
BstBI TTCGAA 1 cut(s) 506
BstC8I GCNNGC 3 cut(s) 635, 1416, 1962
BstDSI CCRYGG 1 cut(s) 948
BstFNI CGCG 1 cut(s) 950
BstHHI GCGC 1 cut(s) 2175
BstMAI GTCTC 1 cut(s) 2120
BstMWI GCNNNNNNNGC 6 cut(s) 215, 947, 1031, 1205, 1394, 1906
BstNI CCWGG 1 cut(s) 1830
BstNSI RCATGY 1 cut(s) 1441
BstSCI CCNGG 4 cut(s) 175, 429, 766, 1828
BstSFI CTRYAG 3 cut(s) 168, 756, 1143
BstSLI GKGCMC 1 cut(s) 183
BstUI CGCG 1 cut(s) 950
BstV1I GCAGC 5 cut(s) 196, 770, 773, 907, 1619
BstV2I GAAGAC 6 cut(s) 150, 411, 438, 1603, 2030, 2185
BstX2I RGATCY 4 cut(s) 469, 724, 744, 1007
BstYI RGATCY 4 cut(s) 469, 724, 744, 1007
BsuI GTATCC 2 cut(s) 1078, 1132
BsuRI GGCC 3 cut(s) 2186, 2260, 2342
BtgI CCRYGG 1 cut(s) 948
BtsI GCAGTG 2 cut(s) 177, 324
BtsIMutI CAGTG 8 cut(s) 177, 324, 352, 536, 550, 1717, 1728, 1903
BveI ACCTGC 3 cut(s) 49, 1294, 2312
Cac8I GCNNGC 3 cut(s) 635, 1416, 1962
CfoI GCGC 1 cut(s) 2175
Cfr13I GGNCC 9 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2185, 2258, 2324
Cfr42I CCGCGG 1 cut(s) 951
CseI GACGC 3 cut(s) 1188, 1386, 1770
Csp6I GTAC 9 cut(s) 7, 72, 377, 804, 1370, 1379, 1452, 1614, 1760
CviQI GTAC 9 cut(s) 7, 72, 377, 804, 1370, 1379, 1452, 1614, 1760
DriI GACNNNNNGTC 1 cut(s) 252
Eam1104I CTCTTC 4 cut(s) 94, 456, 2191, 2350
Eam1105I GACNNNNNGTC 1 cut(s) 252
EarI CTCTTC 4 cut(s) 94, 456, 2191, 2350
EciI GGCGGA 1 cut(s) 677
Ecl136II GAGCTC 1 cut(s) 1882
Eco130I CCWWGG 2 cut(s) 980, 2033
Eco147I AGGCCT 1 cut(s) 2342
Eco24I GRGCYC 4 cut(s) 431, 1490, 1884, 2002
Eco47I GGWCC 7 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2324
Eco53kI GAGCTC 1 cut(s) 1882
Eco57I CTGAAG 8 cut(s) 75, 158, 423, 600, 675, 1027, 1137, 1152
Eco72I CACGTG 1 cut(s) 1385
Eco88I CYCGRG 1 cut(s) 1483
EcoICRI GAGCTC 1 cut(s) 1882
EcoRI GAATTC 1 cut(s) 1051
EcoRII CCWGG 1 cut(s) 1828
EcoT14I CCWWGG 2 cut(s) 980, 2033
EcoT22I ATGCAT 3 cut(s) 1513, 1648, 1945
EcoT38I GRGCYC 4 cut(s) 431, 1490, 1884, 2002
ErhI CCWWGG 2 cut(s) 980, 2033
FalI AAGNNNNNCTT 2 cut(s) 87, 119
FaqI GGGAC 1 cut(s) 1559
FauI CCCGC 1 cut(s) 734
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 2 cut(s) 256, 1861
Fnu4HI GCNGC 6 cut(s) 210, 759, 762, 896, 1608, 1901
FriOI GRGCYC 4 cut(s) 431, 1490, 1884, 2002
Fsp4HI GCNGC 6 cut(s) 210, 759, 762, 896, 1608, 1901
GlaI GCGC 1 cut(s) 2174
GluI GCNGC 6 cut(s) 210, 759, 762, 896, 1608, 1901
GsaI CCCAGC 1 cut(s) 795
HaeIII GGCC 3 cut(s) 2186, 2260, 2342
HapII CCGG 4 cut(s) 176, 332, 431, 767
HgaI GACGC 3 cut(s) 1188, 1386, 1770
HhaI GCGC 1 cut(s) 2175
Hin6I GCGC 1 cut(s) 2173
HinP1I GCGC 1 cut(s) 2173
HincII GTYRAC 1 cut(s) 2092
HindII GTYRAC 1 cut(s) 2092
HindIII AAGCTT 1 cut(s) 713
HpaII CCGG 4 cut(s) 176, 332, 431, 767
HphI GGTGA 9 cut(s) 184, 445, 470, 623, 638, 875, 1232, 1761, 2233
Hpy166II GTNNAC 8 cut(s) 257, 529, 1283, 1379, 1541, 1769, 1862, 2092
Hpy188III TCNNGA 5 cut(s) 962, 1346, 1491, 1586, 1970
Hpy8I GTNNAC 8 cut(s) 257, 529, 1283, 1379, 1541, 1769, 1862, 2092
Hpy99I CGWCG 1 cut(s) 371
HpyCH4III ACNGT 9 cut(s) 71, 76, 356, 540, 808, 1358, 1618, 1712, 2290
HpyCH4IV ACGT 3 cut(s) 382, 1384, 1871
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 947, 1031, 1205, 1394, 1906
HpySE526I ACGT 3 cut(s) 382, 1384, 1871
HspAI GCGC 1 cut(s) 2173
Ksp22I TGATCA 1 cut(s) 487
KspI CCGCGG 1 cut(s) 951
LmnI GCTCC 2 cut(s) 1879, 2318
Lsp1109I GCAGC 5 cut(s) 196, 770, 773, 907, 1619
LweI GCATC 8 cut(s) 227, 229, 1498, 1594, 1612, 1655, 1887, 2044
MaeII ACGT 3 cut(s) 382, 1384, 1871
MaeIII GTNAC 2 cut(s) 545, 670
MfeI CAATTG 1 cut(s) 2328
MflI RGATCY 4 cut(s) 469, 724, 744, 1007
MhlI GDGCHC 6 cut(s) 183, 431, 1390, 1490, 1884, 2002
MluCI AATT 7 cut(s) 230, 289, 418, 617, 1051, 2272, 2328
MlyI GAGTC 2 cut(s) 1270, 1581
MmeI TCCRAC 3 cut(s) 1448, 1724, 2088
Mph1103I ATGCAT 3 cut(s) 1513, 1648, 1945
MseI TTAA 9 cut(s) 233, 513, 749, 777, 854, 927, 1004, 1229, 1442
MslI CAYNNNNRTG 1 cut(s) 197
MspA1I CMGCKG 2 cut(s) 950, 1414
MspI CCGG 4 cut(s) 176, 332, 431, 767
MspR9I CCNGG 4 cut(s) 177, 431, 768, 1830
MunI CAATTG 1 cut(s) 2328
Mva1269I GAATGC 1 cut(s) 1783
MvaI CCWGG 1 cut(s) 1830
MvnI CGCG 1 cut(s) 950
MwoI GCNNNNNNNGC 6 cut(s) 215, 947, 1031, 1205, 1394, 1906
NciI CCSGG 3 cut(s) 177, 431, 768
NlaIV GGNNCC 2 cut(s) 373, 1526
NmeAIII GCCGAG 1 cut(s) 453
NmuCI GTSAC 1 cut(s) 545
NsiI ATGCAT 3 cut(s) 1513, 1648, 1945
NspI RCATGY 1 cut(s) 1441
NspV TTCGAA 1 cut(s) 506
PaqCI CACCTGC 1 cut(s) 1294
PceI AGGCCT 1 cut(s) 2342
PcsI WCGNNNNNNNCGW 1 cut(s) 1381
PctI GAATGC 1 cut(s) 1783
PflFI GACNNNGTC 2 cut(s) 1126, 1571
PkrI GCNGC 6 cut(s) 211, 760, 763, 897, 1609, 1902
PleI GAGTC 2 cut(s) 1269, 1580
PmaCI CACGTG 1 cut(s) 1385
PmlI CACGTG 1 cut(s) 1385
PpsI GAGTC 2 cut(s) 1269, 1580
Ppu21I YACGTR 1 cut(s) 1385
Psp124BI GAGCTC 1 cut(s) 1884
Psp1406I AACGTT 1 cut(s) 382
Psp6I CCWGG 1 cut(s) 1828
PspCI CACGTG 1 cut(s) 1385
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 1 cut(s) 1828
PspN4I GGNNCC 2 cut(s) 373, 1526
PspPI GGNCC 9 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2185, 2258, 2324
PsrI GAACNNNNNNTAC 2 cut(s) 1317, 1349
PstI CTGCAG 3 cut(s) 172, 760, 1147
PsuI RGATCY 4 cut(s) 469, 724, 744, 1007
PsyI GACNNNGTC 2 cut(s) 1126, 1571
PvuII CAGCTG 1 cut(s) 1414
RsaI GTAC 9 cut(s) 8, 73, 378, 805, 1371, 1380, 1453, 1615, 1761
RsaNI GTAC 9 cut(s) 7, 72, 377, 804, 1370, 1379, 1452, 1614, 1760
RseI CAYNNNNRTG 1 cut(s) 197
SacI GAGCTC 1 cut(s) 1884
SacII CCGCGG 1 cut(s) 951
SaqAI TTAA 9 cut(s) 233, 513, 749, 777, 854, 927, 1004, 1229, 1442
SatI GCNGC 6 cut(s) 210, 759, 762, 896, 1608, 1901
Sau96I GGNCC 9 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2185, 2258, 2324
SchI GAGTC 2 cut(s) 1270, 1581
ScrFI CCNGG 4 cut(s) 177, 431, 768, 1830
SduI GDGCHC 6 cut(s) 183, 431, 1390, 1490, 1884, 2002
SfaNI GCATC 8 cut(s) 227, 229, 1498, 1594, 1612, 1655, 1887, 2044
SfcI CTRYAG 3 cut(s) 168, 756, 1143
Sfr303I CCGCGG 1 cut(s) 951
SfuI TTCGAA 1 cut(s) 506
SgrBI CCGCGG 1 cut(s) 951
SinI GGWCC 7 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2324
SmiMI CAYNNNNRTG 1 cut(s) 197
SmlI CTYRAG 1 cut(s) 1302
SmoI CTYRAG 1 cut(s) 1302
SpeI ACTAGT 1 cut(s) 1253
Sse9I AATT 7 cut(s) 230, 289, 418, 617, 1051, 2272, 2328
SseBI AGGCCT 1 cut(s) 2342
SsiI CCGC 7 cut(s) 662, 741, 948, 950, 1075, 1467, 1901
SstI GAGCTC 1 cut(s) 1884
StuI AGGCCT 1 cut(s) 2342
StyD4I CCNGG 4 cut(s) 175, 429, 766, 1828
StyI CCWWGG 2 cut(s) 980, 2033
TaaI ACNGT 9 cut(s) 71, 76, 356, 540, 808, 1358, 1618, 1712, 2290
TaiI ACGT 3 cut(s) 385, 1387, 1874
TaqI TCGA 4 cut(s) 506, 1987, 2002, 2167
TasI AATT 7 cut(s) 230, 289, 418, 617, 1051, 2272, 2328
TatI WGTACW 4 cut(s) 6, 71, 803, 1613
TauI GCSGC 1 cut(s) 1903
Tru1I TTAA 9 cut(s) 233, 513, 749, 777, 854, 927, 1004, 1229, 1442
Tru9I TTAA 9 cut(s) 233, 513, 749, 777, 854, 927, 1004, 1229, 1442
TscAI CASTG 8 cut(s) 177, 331, 359, 543, 550, 1717, 1735, 1910
TseFI GTSAC 1 cut(s) 545
TseI GCWGC 5 cut(s) 209, 758, 761, 895, 1607
Tsp45I GTSAC 1 cut(s) 545
TspGWI ACGGA 2 cut(s) 364, 2239
TspRI CASTG 8 cut(s) 177, 331, 359, 543, 550, 1717, 1735, 1910
Tth111I GACNNNGTC 2 cut(s) 1126, 1571
VpaK11BI GGWCC 7 cut(s) 372, 1077, 1525, 1715, 1808, 2018, 2324
XapI RAATTY 2 cut(s) 289, 1051
XbaI TCTAGA 1 cut(s) 1490
XceI RCATGY 1 cut(s) 1441
XmaJI CCTAGG 1 cut(s) 2033
XmiI GTMKAC 2 cut(s) 256, 1861
Zsp2I ATGCAT 3 cut(s) 1513, 1648, 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.