Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003415

Physical Location & Seq

Genomic Coordinates Forward (+)

10098002 .. 10100578

Gene Structure 2577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0125700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGCGTGAGATTCTTCACATCCAGGGAGGCCAGTGCGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTGGTCTGCGCCGAGCACGGCATCGACGCCACCGGCAGGTACGAAGGCGACGCCGCGCTTCAGCTTGAGAGGATCAATGTCTACTACAACGAGGCCAGTTGCGGCAGGTTCGTCCCCAGGGCTGTGCTCATGGATCTCGAGCCTGGCACCATGGACAGCGTCAGATCTGGTCCGTACGGTCAGATCTTCAGGCCTGACAACTTCGTCTTCGGCCAGTCCGGCGCCGGAAACAACTGGGCTAAAGGTCACTACACCGAAGGAGCTGAGTTGATCGACTCGGTTCTTGATGTGGTTCGCAAGGAGGCCGAGAACTGTGATTGCCTACAAGGGTTTCAGGTGTGCCATTCGCTTGGAGGAGGAACTGGATCTGGTATGGGGACTCTGTTGATTTCGAAAATCAGGGAGGAATACCCTGACAGGATGATGCTCACTTTCTCTGTGTTTCCGTCACCGAAAGTCTCTGATACGGTGGTTGAGCCCTATAATGCTACCTTGTCTGTGCACCAGCTTGTTGAGAATGCGGATGAGTGTATGGTTCTTGATAACGAAGCTCTGTATGACATTTGCTTCCGCACACTCAAGCTCAGTACCCCAAGCTTTGGAGATTTGAACCATTTGATTTCTGCTACCATGTCTGGTGTGACTTGCTGTTTGAGGTTCCCTGGGCAACTCAACTCTGACCTCAGAAAGTTGGCTGTCAATCTCATTCCATTCCCCCGTCTCCACTTTTTCATGGTGGGTTTTGCTCCTTTGACCTCTCGTGGTTCACAGATGTACAGAGCCTTGACTGTGCCAGAACTCACTCAGCAAATGTGGGATTCTAAGAACATGATGTGCGCAGCTGACCCTCGCCATGGTCGCTATCTCACTGCCTCAGCCATGTTCAGGGGAAAGATGAGCACCAAGGAAGTCGATGATCAAATGAGCAATGTTCAGAACAAGAACTCTTCATACTTTGTGGAGTGGATTCCCCACAATGTCAAGTCCACTGTTTGTGATATCCCACCCACAGGCTTGAAGATGGCTTCAACCTTCATTGGAAACTCAACTTCAATTCAGGAGATGTTCCGTCGTGTGAGTGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCATTGGTACACTGGTGAAGGCATGGATGAGATGGAGTTCACAGAGGCTGAAAGCAACATGAATGATCTTGTTTCAGAGTATCAGCAGTACCAGGATGCAACAGCTGAGGAGGATGAGTACTATGAAGAGGAAGAGGAAGAAGAAGCTCAGGAGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

G10

Protein Analysis

447

Amino Acids

50.33

Weight (kDa)

4.77

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tubulin	PF00091	3 - 211	1.3e-64	Tubulin/FtsZ family, GTPase domain
Tubulin_C	PF03953	261 - 382	1.6e-40	Tubulin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21110 AT4G21110
fragaria_vesca	FvH4_5g19590 FvH4_6g18160
malus_domestica	MD00G1001900.v1.1 MD06G1015500.v1.1 MD12G1021200.v1.1 MD14G1018400.v1.1
prunus_persica	Prupe.7G115100_v2.0.a1
pyrus_communis	pycom06g01250 pycom12g01990 pycom14g01740
rosa_chinensis	RchiOBHm_Chr3g0472461 RchiOBHm_Chr6g0267281
rosa_laevigata	RLG00000014017
rosa_multiflora	Rmu_sc0001805.1_g000001 Rmu_sc0002145.1_g000004 Rmu_ssc0000388.1_g000057
rosa_roxburghii	Rroxscaffold_6G00408890 Rroxscaffold_7G00200950
rosa_rugosa	Rorug03G0125700 Rorug03G0125800 Rorug03G0125900 Rorug06G0031100 Rorug06G0031100 Rorug06G0031200 Rorug07G0081500
rosa_samantha	Rh3AG177600 Rh3BG203500 Rh3CG193900 Rh3CG201000 Rh3DG171600 Rh6AG152800 Rh6DG137200
rosa_wichuraiana	Rw3G016390 Rw6G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	269
Acc16I	TGCGCA	1 cut(s)	904
Acc36I	ACCTGC	2 cut(s)	93, 162
AccB1I	GGYRCC	2 cut(s)	212, 287
AccB7I	CCANNNNNTGG	2 cut(s)	60, 665
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	1 cut(s)	122
AciI	CCGC	5 cut(s)	36, 120, 168, 587, 637
AclWI	GGATC	3 cut(s)	146, 207, 439
AcoI	YGGCCR	1 cut(s)	277
AcuI	CTGAAG	2 cut(s)	110, 238
AcyI	GRCGYC	3 cut(s)	93, 117, 288
AfaI	GTAC	7 cut(s)	107, 242, 655, 842, 1193, 1274, 1304
AfiI	CCNNNNNNNGG	6 cut(s)	60, 102, 665, 920, 951, 1076
AgsI	TTSAA	4 cut(s)	676, 1084, 1095, 1119
AjnI	CCWGG	5 cut(s)	21, 182, 208, 727, 1275
AluBI	AGCT	9 cut(s)	130, 329, 574, 617, 649, 663, 908, 1289, 1331
AluI	AGCT	9 cut(s)	130, 329, 574, 617, 649, 663, 908, 1289, 1331
Alw21I	GWGCWC	4 cut(s)	84, 195, 570, 968
Alw26I	GTCTC	2 cut(s)	529, 791
Alw44I	GTGCAC	1 cut(s)	566
AlwI	GGATC	3 cut(s)	146, 207, 439
AlwNI	CAGNNNCTG	1 cut(s)	1232
Ama87I	CYCGRG	1 cut(s)	203
AoxI	GGCC	5 cut(s)	28, 159, 257, 277, 369
ApaLI	GTGCAC	1 cut(s)	566
ApeKI	GCWGC	1 cut(s)	905
ArsI	GACNNNNNNTTYG	2 cut(s)	700, 732
Asp700I	GAANNNNTTC	1 cut(s)	1178
AspLEI	GCGC	4 cut(s)	77, 124, 290, 905
AspS9I	GGNCC	1 cut(s)	236
AsuHPI	GGTGA	2 cut(s)	507, 1211
AsuII	TTCGAA	1 cut(s)	458
AvaI	CYCGRG	1 cut(s)	203
AvaII	GGWCC	1 cut(s)	236
BaeGI	GKGCMC	1 cut(s)	570
BaeI	ACNNNNGTAYC	4 cut(s)	522, 555, 1183, 1216
BanI	GGYRCC	2 cut(s)	212, 287
BanII	GRGCYC	1 cut(s)	546
BauI	CACGAG	1 cut(s)	825
BbsI	GAAGAC	1 cut(s)	265
Bbv12I	GWGCWC	4 cut(s)	84, 195, 570, 968
BbvCI	CCTCAGC	2 cut(s)	940, 1290
BbvI	GCAGC	1 cut(s)	917
BccI	CCATC	2 cut(s)	1081, 1210
BceAI	ACGGC	1 cut(s)	100
BcgI	CGANNNNNNTGC	2 cut(s)	28, 62
BciT130I	CCWGG	5 cut(s)	23, 184, 210, 729, 1277
BclI	TGATCA	1 cut(s)	982
BcoDI	GTCTC	2 cut(s)	529, 791
BfoI	RGCGCY	1 cut(s)	291
BfuAI	ACCTGC	2 cut(s)	93, 162
BglI	GCCNNNNNGGC	2 cut(s)	36, 285
BglII	AGATCT	2 cut(s)	230, 249
BisI	GCNGC	4 cut(s)	37, 120, 169, 906
BlsI	GCNGC	4 cut(s)	38, 121, 170, 907
BmcAI	AGTACT	1 cut(s)	1304
Bme1390I	CCNGG	5 cut(s)	23, 184, 210, 729, 1277
Bme18I	GGWCC	1 cut(s)	236
BmeT110I	CYCGRG	1 cut(s)	203
BmgT120I	GGNCC	1 cut(s)	236
BmiI	GGNNCC	4 cut(s)	52, 214, 289, 725
BmrFI	CCNGG	5 cut(s)	23, 184, 210, 729, 1277
BmrI	ACTGGG	1 cut(s)	310
BmsI	GCATC	3 cut(s)	96, 480, 1270
BmuI	ACTGGG	1 cut(s)	310
BpiI	GAAGAC	1 cut(s)	265
Bpu10I	CCTNAGC	3 cut(s)	940, 1290, 1332
Bpu14I	TTCGAA	1 cut(s)	458
BpuEI	CTTGAG	2 cut(s)	152, 629
BsaHI	GRCGYC	3 cut(s)	93, 117, 288
BsaJI	CCNNGG	8 cut(s)	22, 182, 183, 216, 727, 728, 919, 969
BsaXI	ACNNNNNCTCC	2 cut(s)	1286, 1316
Bsc4I	CCNNNNNNNGG	6 cut(s)	60, 102, 665, 920, 951, 1076
Bse118I	RCCGGY	1 cut(s)	98
Bse1I	ACTGG	6 cut(s)	31, 162, 280, 305, 433, 1201
Bse3DI	GCAATG	1 cut(s)	1000
BseBI	CCWGG	5 cut(s)	23, 184, 210, 729, 1277
BseDI	CCNNGG	8 cut(s)	22, 182, 183, 216, 727, 728, 919, 969
BseGI	GGATG	6 cut(s)	18, 492, 595, 1216, 1285, 1303
BseLI	CCNNNNNNNGG	6 cut(s)	60, 102, 665, 920, 951, 1076
BseMI	GCAATG	1 cut(s)	1000
BseMII	CTCAG	6 cut(s)	321, 664, 763, 884, 954, 1281
BseNI	ACTGG	6 cut(s)	31, 162, 280, 305, 433, 1201
BseRI	GAGGAG	2 cut(s)	435, 1307
BseSI	GKGCMC	1 cut(s)	570
BseXI	GCAGC	1 cut(s)	917
Bsh1236I	CGCG	1 cut(s)	122
BshFI	GGCC	5 cut(s)	30, 161, 259, 279, 371
BshNI	GGYRCC	2 cut(s)	212, 287
BsiHKAI	GWGCWC	4 cut(s)	84, 195, 570, 968
BsiHKCI	CYCGRG	1 cut(s)	203
BsiSI	CCGG	3 cut(s)	99, 285, 291
BsiWI	CGTACG	1 cut(s)	240
BslFI	GGGAC	2 cut(s)	164, 457
BslI	CCNNNNNNNGG	6 cut(s)	60, 102, 665, 920, 951, 1076
BsmAI	GTCTC	2 cut(s)	529, 791
BsmBI	CGTCTC	1 cut(s)	791
BsmFI	GGGAC	2 cut(s)	164, 457
BsmI	GAATGC	1 cut(s)	589
BsnI	GGCC	5 cut(s)	30, 161, 259, 279, 371
BsoBI	CYCGRG	1 cut(s)	203
Bsp119I	TTCGAA	1 cut(s)	458
Bsp1286I	GDGCHC	5 cut(s)	84, 195, 546, 570, 968
Bsp1407I	TGTACA	1 cut(s)	840
Bsp143I	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
Bsp19I	CCATGG	2 cut(s)	216, 919
BspACI	CCGC	5 cut(s)	36, 120, 168, 587, 637
BspANI	GGCC	5 cut(s)	30, 161, 259, 279, 371
BspCNI	CTCAG	6 cut(s)	322, 663, 762, 883, 953, 1282
BspFNI	CGCG	1 cut(s)	122
BspLI	GGNNCC	4 cut(s)	52, 214, 289, 725
BspMI	ACCTGC	2 cut(s)	93, 162
BspPI	GGATC	3 cut(s)	146, 207, 439
BspT104I	TTCGAA	1 cut(s)	458
BspT107I	GGYRCC	2 cut(s)	212, 287
BsrDI	GCAATG	1 cut(s)	1000
BsrFI	RCCGGY	1 cut(s)	98
BsrGI	TGTACA	1 cut(s)	840
BsrI	ACTGG	6 cut(s)	31, 162, 280, 305, 433, 1201
BssAI	RCCGGY	1 cut(s)	98
BssECI	CCNNGG	8 cut(s)	22, 182, 183, 216, 727, 728, 919, 969
BssMI	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
BssNI	GRCGYC	3 cut(s)	93, 117, 288
BssSI	CACGAG	1 cut(s)	825
BssT1I	CCWWGG	3 cut(s)	216, 919, 969
Bst2BI	CACGAG	1 cut(s)	825
Bst2UI	CCWGG	5 cut(s)	23, 184, 210, 729, 1277
Bst4CI	ACNGT	5 cut(s)	245, 380, 535, 856, 1057
Bst6I	CTCTTC	3 cut(s)	1018, 1305, 1311
BstACI	GRCGYC	3 cut(s)	93, 117, 288
BstAUI	TGTACA	1 cut(s)	840
BstBI	TTCGAA	1 cut(s)	458
BstDEI	CTNAG	8 cut(s)	330, 650, 749, 870, 888, 940, 1290, 1332
BstDSI	CCRYGG	2 cut(s)	216, 919
BstF5I	GGATG	6 cut(s)	18, 492, 595, 1216, 1285, 1303
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	291
BstHHI	GCGC	4 cut(s)	77, 124, 290, 905
BstKTI	GATC	9 cut(s)	48, 141, 202, 233, 252, 339, 434, 985, 1252
BstMAI	GTCTC	2 cut(s)	529, 791
BstMBI	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 285, 924
BstNI	CCWGG	5 cut(s)	23, 184, 210, 729, 1277
BstSCI	CCNGG	5 cut(s)	21, 182, 208, 727, 1275
BstSLI	GKGCMC	1 cut(s)	570
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	1 cut(s)	917
BstV2I	GAAGAC	1 cut(s)	265
BstX2I	RGATCY	4 cut(s)	199, 230, 249, 431
BstXI	CCANNNNNNTGG	1 cut(s)	416
BstYI	RGATCY	4 cut(s)	199, 230, 249, 431
BsuRI	GGCC	5 cut(s)	30, 161, 259, 279, 371
BtgI	CCRYGG	2 cut(s)	216, 919
BtsCI	GGATG	6 cut(s)	18, 492, 595, 1216, 1285, 1303
BtsI	GCAGTG	2 cut(s)	933, 1155
BtsIMutI	CAGTG	5 cut(s)	38, 933, 1053, 1155, 1194
BveI	ACCTGC	2 cut(s)	93, 162
CaiI	CAGNNNCTG	1 cut(s)	1232
CfoI	GCGC	4 cut(s)	77, 124, 290, 905
Cfr10I	RCCGGY	1 cut(s)	98
Cfr13I	GGNCC	1 cut(s)	236
CseI	GACGC	3 cut(s)	101, 125, 214
Csp6I	GTAC	7 cut(s)	106, 241, 654, 841, 1192, 1273, 1303
CviAII	CATG	9 cut(s)	196, 217, 697, 799, 895, 920, 946, 1207, 1243
CviQI	GTAC	7 cut(s)	106, 241, 654, 841, 1192, 1273, 1303
DdeI	CTNAG	8 cut(s)	330, 650, 749, 870, 888, 940, 1290, 1332
DinI	GGCGCC	1 cut(s)	289
DpnI	GATC	9 cut(s)	47, 140, 201, 232, 251, 338, 433, 984, 1251
DpnII	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
DrdI	GACNNNNNNGTC	1 cut(s)	269
DseDI	GACNNNNNNGTC	1 cut(s)	269
EaeI	YGGCCR	1 cut(s)	277
Eam1104I	CTCTTC	3 cut(s)	1018, 1305, 1311
EarI	CTCTTC	3 cut(s)	1018, 1305, 1311
Eco130I	CCWWGG	3 cut(s)	216, 919, 969
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	1 cut(s)	546
Eco32I	GATATC	1 cut(s)	1066
Eco47I	GGWCC	1 cut(s)	236
Eco57I	CTGAAG	2 cut(s)	110, 238
Eco88I	CYCGRG	1 cut(s)	203
EcoRII	CCWGG	5 cut(s)	21, 182, 208, 727, 1275
EcoRV	GATATC	1 cut(s)	1066
EcoT14I	CCWWGG	3 cut(s)	216, 919, 969
EcoT38I	GRGCYC	1 cut(s)	546
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
ErhI	CCWWGG	3 cut(s)	216, 919, 969
Esp3I	CGTCTC	1 cut(s)	791
FaeI	CATG	9 cut(s)	199, 220, 700, 802, 898, 923, 949, 1210, 1246
FalI	AAGNNNNNCTT	2 cut(s)	1166, 1198
FaqI	GGGAC	2 cut(s)	164, 457
FatI	CATG	9 cut(s)	195, 216, 696, 798, 894, 919, 945, 1206, 1242
FbaI	TGATCA	1 cut(s)	982
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	4 cut(s)	37, 120, 169, 906
FokI	GGATG	6 cut(s)	5, 499, 602, 1223, 1292, 1310
FriOI	GRGCYC	1 cut(s)	546
Fsp4HI	GCNGC	4 cut(s)	37, 120, 169, 906
FspI	TGCGCA	1 cut(s)	904
GlaI	GCGC	4 cut(s)	76, 123, 289, 904
GluI	GCNGC	4 cut(s)	37, 120, 169, 906
HaeII	RGCGCY	1 cut(s)	291
HaeIII	GGCC	5 cut(s)	30, 161, 259, 279, 371
HapII	CCGG	3 cut(s)	99, 285, 291
HgaI	GACGC	3 cut(s)	101, 125, 214
HhaI	GCGC	4 cut(s)	77, 124, 290, 905
Hin1I	GRCGYC	3 cut(s)	93, 117, 288
Hin1II	CATG	9 cut(s)	199, 220, 700, 802, 898, 923, 949, 1210, 1246
Hin6I	GCGC	4 cut(s)	75, 122, 288, 903
HinP1I	GCGC	4 cut(s)	75, 122, 288, 903
HindIII	AAGCTT	1 cut(s)	661
HinfI	GANTC	5 cut(s)	10, 341, 445, 884, 1033
HpaII	CCGG	3 cut(s)	99, 285, 291
HphI	GGTGA	2 cut(s)	507, 1211
Hpy166II	GTNNAC	7 cut(s)	148, 568, 833, 1053, 1155, 1194, 1224
Hpy188I	TCNGA	8 cut(s)	50, 230, 249, 529, 745, 752, 1002, 1261
Hpy188III	TCNNGA	6 cut(s)	203, 350, 605, 1124, 1168, 1334
Hpy8I	GTNNAC	7 cut(s)	148, 568, 833, 1053, 1155, 1194, 1224
Hpy99I	CGWCG	3 cut(s)	95, 119, 1140
HpyAV	CCTTC	5 cut(s)	104, 317, 1108, 1168, 1196
HpyCH4III	ACNGT	5 cut(s)	245, 380, 535, 856, 1057
HpyCH4V	TGCA	3 cut(s)	568, 1186, 1283
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 285, 924
HpyF3I	CTNAG	8 cut(s)	330, 650, 749, 870, 888, 940, 1290, 1332
Hsp92I	GRCGYC	3 cut(s)	93, 117, 288
Hsp92II	CATG	9 cut(s)	199, 220, 700, 802, 898, 923, 949, 1210, 1246
HspAI	GCGC	4 cut(s)	75, 122, 288, 903
KasI	GGCGCC	1 cut(s)	287
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
LmnI	GCTCC	3 cut(s)	50, 326, 817
Lsp1109I	GCAGC	1 cut(s)	917
LweI	GCATC	3 cut(s)	96, 480, 1270
MaeIII	GTNAC	3 cut(s)	311, 513, 706
MalI	GATC	9 cut(s)	47, 140, 201, 232, 251, 338, 433, 984, 1251
MboI	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
MboII	GAAGA	9 cut(s)	5, 244, 265, 1005, 1096, 1322, 1328, 1334, 1337
MflI	RGATCY	4 cut(s)	199, 230, 249, 431
MhlI	GDGCHC	5 cut(s)	84, 195, 546, 570, 968
MluCI	AATT	1 cut(s)	1119
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	2 cut(s)	335, 439
MroXI	GAANNNNTTC	1 cut(s)	1178
MslI	CAYNNNNRTG	1 cut(s)	1160
MspA1I	CMGCKG	2 cut(s)	908, 1289
MspI	CCGG	3 cut(s)	99, 285, 291
MspR9I	CCNGG	5 cut(s)	23, 184, 210, 729, 1277
Mva1269I	GAATGC	1 cut(s)	589
MvaI	CCWGG	5 cut(s)	23, 184, 210, 729, 1277
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	3 cut(s)	36, 285, 924
NarI	GGCGCC	1 cut(s)	288
NcoI	CCATGG	2 cut(s)	216, 919
NdeII	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
NlaIII	CATG	9 cut(s)	199, 220, 700, 802, 898, 923, 949, 1210, 1246
NlaIV	GGNNCC	4 cut(s)	52, 214, 289, 725
NmeAIII	GCCGAG	2 cut(s)	103, 397
NmuCI	GTSAC	3 cut(s)	311, 513, 706
NsbI	TGCGCA	1 cut(s)	904
NspV	TTCGAA	1 cut(s)	458
PaeR7I	CTCGAG	1 cut(s)	203
PasI	CCCWGGG	2 cut(s)	183, 728
PceI	AGGCCT	1 cut(s)	259
PctI	GAATGC	1 cut(s)	589
PdmI	GAANNNNTTC	1 cut(s)	1178
PfeI	GAWTC	3 cut(s)	10, 884, 1033
Pfl23II	CGTACG	1 cut(s)	240
PflFI	GACNNNGTC	1 cut(s)	224
PflMI	CCANNNNNTGG	2 cut(s)	60, 665
PkrI	GCNGC	4 cut(s)	38, 121, 170, 907
PleI	GAGTC	2 cut(s)	335, 439
PluTI	GGCGCC	1 cut(s)	291
PpsI	GAGTC	2 cut(s)	335, 439
Psp6I	CCWGG	5 cut(s)	21, 182, 208, 727, 1275
PspGI	CCWGG	5 cut(s)	21, 182, 208, 727, 1275
PspLI	CGTACG	1 cut(s)	240
PspN4I	GGNNCC	4 cut(s)	52, 214, 289, 725
PspPI	GGNCC	1 cut(s)	236
PsrI	GAACNNNNNNTAC	2 cut(s)	1001, 1033
PstNI	CAGNNNCTG	1 cut(s)	1232
PsuI	RGATCY	4 cut(s)	199, 230, 249, 431
PsyI	GACNNNGTC	1 cut(s)	224
PvuII	CAGCTG	2 cut(s)	908, 1289
RsaI	GTAC	7 cut(s)	107, 242, 655, 842, 1193, 1274, 1304
RsaNI	GTAC	7 cut(s)	106, 241, 654, 841, 1192, 1273, 1303
RseI	CAYNNNNRTG	1 cut(s)	1160
SatI	GCNGC	4 cut(s)	37, 120, 169, 906
Sau3AI	GATC	9 cut(s)	45, 138, 199, 230, 249, 336, 431, 982, 1249
Sau96I	GGNCC	1 cut(s)	236
ScaI	AGTACT	1 cut(s)	1304
SchI	GAGTC	2 cut(s)	335, 439
ScrFI	CCNGG	5 cut(s)	23, 184, 210, 729, 1277
SduI	GDGCHC	5 cut(s)	84, 195, 546, 570, 968
SfaNI	GCATC	3 cut(s)	96, 480, 1270
SfoI	GGCGCC	1 cut(s)	289
Sfr274I	CTCGAG	1 cut(s)	203
SfuI	TTCGAA	1 cut(s)	458
SinI	GGWCC	1 cut(s)	236
SlaI	CTCGAG	1 cut(s)	203
SmiMI	CAYNNNNRTG	1 cut(s)	1160
SmlI	CTYRAG	3 cut(s)	131, 203, 644
SmoI	CTYRAG	3 cut(s)	131, 203, 644
Sse9I	AATT	1 cut(s)	1119
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	5 cut(s)	36, 120, 168, 587, 637
SspDI	GGCGCC	1 cut(s)	287
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	5 cut(s)	21, 182, 208, 727, 1275
StyI	CCWWGG	3 cut(s)	216, 919, 969
TaaI	ACNGT	5 cut(s)	245, 380, 535, 856, 1057
TaqI	TCGA	5 cut(s)	90, 204, 339, 458, 978
TasI	AATT	1 cut(s)	1119
TatI	WGTACW	2 cut(s)	840, 1302
TauI	GCSGC	3 cut(s)	39, 122, 171
TfiI	GAWTC	3 cut(s)	10, 884, 1033
TscAI	CASTG	5 cut(s)	38, 940, 1060, 1162, 1201
TseFI	GTSAC	3 cut(s)	311, 513, 706
TseI	GCWGC	1 cut(s)	905
Tsp45I	GTSAC	3 cut(s)	311, 513, 706
TspDTI	ATGAA	5 cut(s)	787, 1005, 1090, 1259, 1323
TspGWI	ACGGA	3 cut(s)	228, 501, 1124
TspRI	CASTG	5 cut(s)	38, 940, 1060, 1162, 1201
Tth111I	GACNNNGTC	1 cut(s)	224
Van91I	CCANNNNNTGG	2 cut(s)	60, 665
VneI	GTGCAC	1 cut(s)	566
VpaK11BI	GGWCC	1 cut(s)	236
XhoI	CTCGAG	1 cut(s)	203
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	1 cut(s)	1178
ZrmI	AGTACT	1 cut(s)	1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.