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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g02611 FvH4_5g02611 FvH4_5g02611 |
| malus_domestica | MD06G1085200.v1.1 |
| prunus_persica | Prupe.5G101200_v2.0.a1 Prupe.5G101200_v2.0.a1 Prupe.5G101200_v2.0.a1 |
| pyrus_communis | pycom06g08130 |
| rosa_chinensis | RchiOBHm_Chr7g0197481 |
| rosa_laevigata | RLG00000003937 |
| rosa_multiflora | Rmu_sc0002167.1_g000002 Rmu_sc0013361.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00258430 |
| rosa_rugosa | Rorug07G0040000 |
| rosa_samantha | Rh7AG165100 Rh7BG167200 Rh7CG173600 Rh7DG166500 |
| rosa_wichuraiana | Rw7G014390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 622 |
| AciI | CCGC | 1 cut(s) | 626 |
| AclWI | GGATC | 5 cut(s) | 387, 796, 1088, 1253, 1266 |
| AcoI | YGGCCR | 1 cut(s) | 871 |
| AcsI | RAATTY | 2 cut(s) | 400, 928 |
| AfaI | GTAC | 5 cut(s) | 802, 849, 1161, 1638, 1696 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 19, 1040, 1268, 1729 |
| AjnI | CCWGG | 1 cut(s) | 317 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 465, 497, 1649, 1681 |
| AluBI | AGCT | 5 cut(s) | 89, 770, 1205, 1530, 1629 |
| AluI | AGCT | 5 cut(s) | 89, 770, 1205, 1530, 1629 |
| Alw21I | GWGCWC | 1 cut(s) | 772 |
| Alw26I | GTCTC | 1 cut(s) | 677 |
| AlwI | GGATC | 5 cut(s) | 387, 796, 1088, 1253, 1266 |
| Ama87I | CYCGRG | 1 cut(s) | 1563 |
| AoxI | GGCC | 1 cut(s) | 871 |
| ApeKI | GCWGC | 4 cut(s) | 86, 335, 697, 967 |
| ApoI | RAATTY | 2 cut(s) | 400, 928 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 920, 952 |
| AseI | ATTAAT | 1 cut(s) | 954 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1557 |
| AspS9I | GGNCC | 2 cut(s) | 1115, 1428 |
| AsuHPI | GGTGA | 4 cut(s) | 20, 448, 1265, 1385 |
| AsuII | TTCGAA | 1 cut(s) | 608 |
| AvaI | CYCGRG | 1 cut(s) | 1563 |
| AvaII | GGWCC | 2 cut(s) | 1115, 1428 |
| AxyI | CCTNAGG | 1 cut(s) | 14 |
| BaeGI | GKGCMC | 1 cut(s) | 231 |
| BalI | TGGCCA | 1 cut(s) | 873 |
| BamHI | GGATCC | 1 cut(s) | 1258 |
| BanI | GGYRCC | 1 cut(s) | 622 |
| BanII | GRGCYC | 1 cut(s) | 772 |
| BauI | CACGAG | 1 cut(s) | 92 |
| BbsI | GAAGAC | 2 cut(s) | 45, 1650 |
| Bbv12I | GWGCWC | 1 cut(s) | 772 |
| BbvI | GCAGC | 4 cut(s) | 98, 322, 709, 979 |
| BccI | CCATC | 3 cut(s) | 260, 433, 1080 |
| BciT130I | CCWGG | 1 cut(s) | 319 |
| BcoDI | GTCTC | 1 cut(s) | 677 |
| BfaI | CTAG | 4 cut(s) | 807, 882, 1242, 1467 |
| BglII | AGATCT | 2 cut(s) | 1019, 1052 |
| BisI | GCNGC | 5 cut(s) | 87, 336, 626, 698, 968 |
| BlsI | GCNGC | 5 cut(s) | 88, 337, 627, 699, 969 |
| BmcAI | AGTACT | 1 cut(s) | 849 |
| Bme1390I | CCNGG | 1 cut(s) | 319 |
| Bme18I | GGWCC | 2 cut(s) | 1115, 1428 |
| BmeT110I | CYCGRG | 1 cut(s) | 1563 |
| BmgT120I | GGNCC | 2 cut(s) | 1115, 1428 |
| BmiI | GGNNCC | 6 cut(s) | 624, 1260, 1429, 1430, 1490, 1606 |
| BmrFI | CCNGG | 1 cut(s) | 319 |
| BmrI | ACTGGG | 1 cut(s) | 1494 |
| BmsI | GCATC | 5 cut(s) | 709, 734, 979, 1133, 1470 |
| BmuI | ACTGGG | 1 cut(s) | 1494 |
| BpiI | GAAGAC | 2 cut(s) | 45, 1650 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 169, 201, 268, 300 |
| Bpu14I | TTCGAA | 1 cut(s) | 608 |
| BpuEI | CTTGAG | 1 cut(s) | 1674 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1057 |
| BsaJI | CCNNGG | 5 cut(s) | 318, 339, 896, 1076, 1267 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 504, 534 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 19, 1040, 1268, 1729 |
| Bse1I | ACTGG | 3 cut(s) | 111, 1194, 1489 |
| Bse21I | CCTNAGG | 1 cut(s) | 14 |
| Bse3DI | GCAATG | 1 cut(s) | 1413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1057 |
| BseBI | CCWGG | 1 cut(s) | 319 |
| BseDI | CCNNGG | 5 cut(s) | 318, 339, 896, 1076, 1267 |
| BseGI | GGATG | 6 cut(s) | 349, 420, 448, 1072, 1461, 1599 |
| BseJI | GATNNNNATC | 1 cut(s) | 1057 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 19, 1040, 1268, 1729 |
| BseMI | GCAATG | 1 cut(s) | 1413 |
| BseMII | CTCAG | 2 cut(s) | 5, 183 |
| BseNI | ACTGG | 3 cut(s) | 111, 1194, 1489 |
| BseRI | GAGGAG | 1 cut(s) | 1158 |
| BseSI | GKGCMC | 1 cut(s) | 231 |
| BseXI | GCAGC | 4 cut(s) | 98, 322, 709, 979 |
| BsgI | GTGCAG | 1 cut(s) | 716 |
| BshFI | GGCC | 1 cut(s) | 873 |
| BshNI | GGYRCC | 1 cut(s) | 622 |
| BsiHKAI | GWGCWC | 1 cut(s) | 772 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1563 |
| BsiSI | CCGG | 1 cut(s) | 1308 |
| BslFI | GGGAC | 1 cut(s) | 1414 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 19, 1040, 1268, 1729 |
| BsmAI | GTCTC | 1 cut(s) | 677 |
| BsmFI | GGGAC | 1 cut(s) | 1414 |
| BsnI | GGCC | 1 cut(s) | 873 |
| BsoBI | CYCGRG | 1 cut(s) | 1563 |
| Bsp119I | TTCGAA | 1 cut(s) | 608 |
| Bsp1286I | GDGCHC | 2 cut(s) | 231, 772 |
| Bsp143I | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| Bsp19I | CCATGG | 2 cut(s) | 339, 1076 |
| BspACI | CCGC | 1 cut(s) | 626 |
| BspANI | GGCC | 1 cut(s) | 873 |
| BspCNI | CTCAG | 2 cut(s) | 6, 184 |
| BspHI | TCATGA | 3 cut(s) | 174, 262, 286 |
| BspLI | GGNNCC | 6 cut(s) | 624, 1260, 1429, 1430, 1490, 1606 |
| BspPI | GGATC | 5 cut(s) | 387, 796, 1088, 1253, 1266 |
| BspT104I | TTCGAA | 1 cut(s) | 608 |
| BspT107I | GGYRCC | 1 cut(s) | 622 |
| BsrDI | GCAATG | 1 cut(s) | 1413 |
| BsrI | ACTGG | 3 cut(s) | 111, 1194, 1489 |
| BssECI | CCNNGG | 5 cut(s) | 318, 339, 896, 1076, 1267 |
| BssMI | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| BssSI | CACGAG | 1 cut(s) | 92 |
| BssT1I | CCWWGG | 4 cut(s) | 339, 896, 1076, 1267 |
| Bst2BI | CACGAG | 1 cut(s) | 92 |
| Bst2UI | CCWGG | 1 cut(s) | 319 |
| Bst4CI | ACNGT | 2 cut(s) | 1159, 1303 |
| Bst6I | CTCTTC | 3 cut(s) | 456, 567, 711 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 427 |
| BstBI | TTCGAA | 1 cut(s) | 608 |
| BstC8I | GCNNGC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 3 cut(s) | 14, 192, 537 |
| BstDSI | CCRYGG | 2 cut(s) | 339, 1076 |
| BstEII | GGTNACC | 1 cut(s) | 8 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1038, 1727 |
| BstF5I | GGATG | 6 cut(s) | 349, 420, 448, 1072, 1461, 1599 |
| BstKTI | GATC | 6 cut(s) | 382, 791, 1022, 1055, 1083, 1261 |
| BstMAI | GTCTC | 1 cut(s) | 677 |
| BstMBI | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 427, 884, 1536 |
| BstNI | CCWGG | 1 cut(s) | 319 |
| BstPI | GGTNACC | 1 cut(s) | 8 |
| BstSCI | CCNGG | 1 cut(s) | 317 |
| BstSLI | GKGCMC | 1 cut(s) | 231 |
| BstV1I | GCAGC | 4 cut(s) | 98, 322, 709, 979 |
| BstV2I | GAAGAC | 2 cut(s) | 45, 1650 |
| BstX2I | RGATCY | 5 cut(s) | 379, 788, 1019, 1052, 1258 |
| BstYI | RGATCY | 5 cut(s) | 379, 788, 1019, 1052, 1258 |
| Bsu36I | CCTNAGG | 1 cut(s) | 14 |
| BsuRI | GGCC | 1 cut(s) | 873 |
| BtgI | CCRYGG | 2 cut(s) | 339, 1076 |
| BtgZI | GCGATG | 1 cut(s) | 60 |
| BtsCI | GGATG | 6 cut(s) | 349, 420, 448, 1072, 1461, 1599 |
| Cac8I | GCNNGC | 1 cut(s) | 333 |
| CciI | TCATGA | 3 cut(s) | 174, 262, 286 |
| Cfr13I | GGNCC | 2 cut(s) | 1115, 1428 |
| Csp6I | GTAC | 5 cut(s) | 801, 848, 1160, 1637, 1695 |
| CviQI | GTAC | 5 cut(s) | 801, 848, 1160, 1637, 1695 |
| DdeI | CTNAG | 3 cut(s) | 14, 192, 537 |
| DpnI | GATC | 6 cut(s) | 381, 790, 1021, 1054, 1082, 1260 |
| DpnII | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| EaeI | YGGCCR | 1 cut(s) | 871 |
| Eam1104I | CTCTTC | 3 cut(s) | 456, 567, 711 |
| EarI | CTCTTC | 3 cut(s) | 456, 567, 711 |
| Ecl136II | GAGCTC | 1 cut(s) | 770 |
| Eco130I | CCWWGG | 4 cut(s) | 339, 896, 1076, 1267 |
| Eco24I | GRGCYC | 1 cut(s) | 772 |
| Eco47I | GGWCC | 2 cut(s) | 1115, 1428 |
| Eco53kI | GAGCTC | 1 cut(s) | 770 |
| Eco81I | CCTNAGG | 1 cut(s) | 14 |
| Eco88I | CYCGRG | 1 cut(s) | 1563 |
| Eco91I | GGTNACC | 1 cut(s) | 8 |
| EcoICRI | GAGCTC | 1 cut(s) | 770 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1038, 1727 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1428 |
| EcoO65I | GGTNACC | 1 cut(s) | 8 |
| EcoRII | CCWGG | 1 cut(s) | 317 |
| EcoT14I | CCWWGG | 4 cut(s) | 339, 896, 1076, 1267 |
| EcoT38I | GRGCYC | 1 cut(s) | 772 |
| ErhI | CCWWGG | 4 cut(s) | 339, 896, 1076, 1267 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1165, 1197, 1683, 1715, 1707, 1739 |
| FaqI | GGGAC | 1 cut(s) | 1414 |
| Fnu4HI | GCNGC | 5 cut(s) | 87, 336, 626, 698, 968 |
| FokI | GGATG | 6 cut(s) | 356, 427, 455, 1059, 1448, 1606 |
| FriOI | GRGCYC | 1 cut(s) | 772 |
| Fsp4HI | GCNGC | 5 cut(s) | 87, 336, 626, 698, 968 |
| FspBI | CTAG | 4 cut(s) | 807, 882, 1242, 1467 |
| GluI | GCNGC | 5 cut(s) | 87, 336, 626, 698, 968 |
| HaeIII | GGCC | 1 cut(s) | 873 |
| HapII | CCGG | 1 cut(s) | 1308 |
| HincII | GTYRAC | 1 cut(s) | 1155 |
| HindII | GTYRAC | 1 cut(s) | 1155 |
| HpaII | CCGG | 1 cut(s) | 1308 |
| HphI | GGTGA | 4 cut(s) | 20, 448, 1265, 1385 |
| Hpy166II | GTNNAC | 5 cut(s) | 556, 1155, 1239, 1685, 1697 |
| Hpy188I | TCNGA | 6 cut(s) | 585, 705, 715, 975, 1132, 1621 |
| Hpy188III | TCNNGA | 8 cut(s) | 92, 175, 263, 287, 461, 741, 1106, 1565 |
| Hpy8I | GTNNAC | 5 cut(s) | 556, 1155, 1239, 1685, 1697 |
| HpyAV | CCTTC | 4 cut(s) | 28, 287, 1595, 1616 |
| HpyCH4III | ACNGT | 2 cut(s) | 1159, 1303 |
| HpyCH4IV | ACGT | 1 cut(s) | 589 |
| HpyCH4V | TGCA | 9 cut(s) | 430, 505, 659, 697, 736, 747, 1017, 1124, 1499 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 427, 884, 1536 |
| HpyF3I | CTNAG | 3 cut(s) | 14, 192, 537 |
| HpySE526I | ACGT | 1 cut(s) | 589 |
| KflI | GGGWCCC | 1 cut(s) | 1428 |
| Kzo9I | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| LmnI | GCTCC | 1 cut(s) | 1604 |
| Lsp1109I | GCAGC | 4 cut(s) | 98, 322, 709, 979 |
| LweI | GCATC | 5 cut(s) | 709, 734, 979, 1133, 1470 |
| MaeI | CTAG | 4 cut(s) | 807, 882, 1242, 1467 |
| MaeII | ACGT | 1 cut(s) | 589 |
| MaeIII | GTNAC | 3 cut(s) | 8, 388, 1391 |
| MalI | GATC | 6 cut(s) | 381, 790, 1021, 1054, 1082, 1260 |
| MboI | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| MfeI | CAATTG | 3 cut(s) | 431, 1012, 1494 |
| MflI | RGATCY | 5 cut(s) | 379, 788, 1019, 1052, 1258 |
| MhlI | GDGCHC | 2 cut(s) | 231, 772 |
| MlsI | TGGCCA | 1 cut(s) | 873 |
| MluNI | TGGCCA | 1 cut(s) | 873 |
| MlyI | GAGTC | 6 cut(s) | 59, 168, 374, 1039, 1178, 1399 |
| MmeI | TCCRAC | 1 cut(s) | 1680 |
| Mox20I | TGGCCA | 1 cut(s) | 873 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1557 |
| MscI | TGGCCA | 1 cut(s) | 873 |
| MseI | TTAA | 5 cut(s) | 198, 351, 384, 677, 954 |
| Msp20I | TGGCCA | 1 cut(s) | 873 |
| MspI | CCGG | 1 cut(s) | 1308 |
| MspR9I | CCNGG | 1 cut(s) | 319 |
| MunI | CAATTG | 3 cut(s) | 431, 1012, 1494 |
| MvaI | CCWGG | 1 cut(s) | 319 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 427, 884, 1536 |
| NcoI | CCATGG | 2 cut(s) | 339, 1076 |
| NdeII | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| NlaIV | GGNNCC | 6 cut(s) | 624, 1260, 1429, 1430, 1490, 1606 |
| NmuCI | GTSAC | 3 cut(s) | 8, 388, 1391 |
| NspV | TTCGAA | 1 cut(s) | 608 |
| PaeR7I | CTCGAG | 1 cut(s) | 1563 |
| PagI | TCATGA | 3 cut(s) | 174, 262, 286 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 472 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1557 |
| PfeI | GAWTC | 4 cut(s) | 65, 281, 357, 755 |
| PkrI | GCNGC | 5 cut(s) | 88, 337, 627, 699, 969 |
| PleI | GAGTC | 6 cut(s) | 58, 167, 373, 1038, 1177, 1398 |
| PpsI | GAGTC | 6 cut(s) | 58, 167, 373, 1038, 1177, 1398 |
| PpuMI | RGGWCCY | 1 cut(s) | 1428 |
| PshBI | ATTAAT | 1 cut(s) | 954 |
| Psp124BI | GAGCTC | 1 cut(s) | 772 |
| Psp5II | RGGWCCY | 1 cut(s) | 1428 |
| Psp6I | CCWGG | 1 cut(s) | 317 |
| PspEI | GGTNACC | 1 cut(s) | 8 |
| PspGI | CCWGG | 1 cut(s) | 317 |
| PspN4I | GGNNCC | 6 cut(s) | 624, 1260, 1429, 1430, 1490, 1606 |
| PspPI | GGNCC | 2 cut(s) | 1115, 1428 |
| PspPPI | RGGWCCY | 1 cut(s) | 1428 |
| PsuI | RGATCY | 5 cut(s) | 379, 788, 1019, 1052, 1258 |
| RsaI | GTAC | 5 cut(s) | 802, 849, 1161, 1638, 1696 |
| RsaNI | GTAC | 5 cut(s) | 801, 848, 1160, 1637, 1695 |
| SacI | GAGCTC | 1 cut(s) | 772 |
| SaqAI | TTAA | 5 cut(s) | 198, 351, 384, 677, 954 |
| SatI | GCNGC | 5 cut(s) | 87, 336, 626, 698, 968 |
| Sau3AI | GATC | 6 cut(s) | 379, 788, 1019, 1052, 1080, 1258 |
| Sau96I | GGNCC | 2 cut(s) | 1115, 1428 |
| ScaI | AGTACT | 1 cut(s) | 849 |
| SchI | GAGTC | 6 cut(s) | 59, 168, 374, 1039, 1178, 1399 |
| ScrFI | CCNGG | 1 cut(s) | 319 |
| SduI | GDGCHC | 2 cut(s) | 231, 772 |
| SfaNI | GCATC | 5 cut(s) | 709, 734, 979, 1133, 1470 |
| Sfr274I | CTCGAG | 1 cut(s) | 1563 |
| SfuI | TTCGAA | 1 cut(s) | 608 |
| SinI | GGWCC | 2 cut(s) | 1115, 1428 |
| SlaI | CTCGAG | 1 cut(s) | 1563 |
| SmlI | CTYRAG | 2 cut(s) | 1563, 1689 |
| SmoI | CTYRAG | 2 cut(s) | 1563, 1689 |
| SsiI | CCGC | 1 cut(s) | 626 |
| SspI | AATATT | 2 cut(s) | 580, 784 |
| SspMI | CTAG | 4 cut(s) | 807, 882, 1242, 1467 |
| SstI | GAGCTC | 1 cut(s) | 772 |
| StyD4I | CCNGG | 1 cut(s) | 317 |
| StyI | CCWWGG | 4 cut(s) | 339, 896, 1076, 1267 |
| TaaI | ACNGT | 2 cut(s) | 1159, 1303 |
| TaiI | ACGT | 1 cut(s) | 592 |
| TaqI | TCGA | 8 cut(s) | 608, 742, 844, 1083, 1105, 1167, 1551, 1564 |
| TatI | WGTACW | 1 cut(s) | 847 |
| TauI | GCSGC | 1 cut(s) | 628 |
| TfiI | GAWTC | 4 cut(s) | 65, 281, 357, 755 |
| Tru1I | TTAA | 5 cut(s) | 198, 351, 384, 677, 954 |
| Tru9I | TTAA | 5 cut(s) | 198, 351, 384, 677, 954 |
| TseFI | GTSAC | 3 cut(s) | 8, 388, 1391 |
| TseI | GCWGC | 4 cut(s) | 86, 335, 697, 967 |
| Tsp45I | GTSAC | 3 cut(s) | 8, 388, 1391 |
| TspGWI | ACGGA | 1 cut(s) | 481 |
| VpaK11BI | GGWCC | 2 cut(s) | 1115, 1428 |
| VspI | ATTAAT | 1 cut(s) | 954 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1038, 1727 |
| XapI | RAATTY | 2 cut(s) | 400, 928 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1403 |
| XhoI | CTCGAG | 1 cut(s) | 1563 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1557 |
| XspI | CTAG | 4 cut(s) | 807, 882, 1242, 1467 |
| ZrmI | AGTACT | 1 cut(s) | 849 |