Rh7BG167200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
13003341 .. 13005092
1752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG167200.1

Sequence Viewer

Length: 1752 bp
ATGGGTGGTGACCTGAGGTGGGAGTTTAGGAGGAAGGACAATGGCGATGAGTCTTCAAGTGATGAATCTAAATCAAGTAGTGAGGCGGCTCACGAGAAGCATAAACTGGTTTCCTCTTTGAGTTCGGTTGAAAATGATGAAGAAATTGGAACTCATAGAGTCAAGCAGAATGTCACGAGCAATCCTCATACTGAGGTTAAAATTATGTCTGGGAAAGGCAAAAATGTGCACTCACAAAGGAGTGGAAAGGAAAGTTCAATTCATGATGGCACAGAGAGGGATTCTCATGAAGAAGGCAGTAGAAAAAAGAGTAAAACCAGTGTTTATGAGCCTGCTGCCATGGATGAGATTAAGAGATTCATGGAGTCCTTATTAGAGGATCTTAAAGTGACAAGAGAAAATTTGTTTTCATGGATGAGGCAGGAAATGCAAAAATTGGTGACAGATGATACTCTTCCACCTCTTGAACGGAGAGAACGAAGTTTTGGAGAGAAAAATCTCCTAGTGCAACATGGAGAAATCGTTGAGAACACCACCTCCAAGGAGAATAGACAAGTGAACAAAAGAAAGTTTGAAGAGAATATTCAGATTCGTCATCAAAATAACTATCCGAAAGATGTTCTGGTGCCGCATGAAACCAACTTTGAGGATAATGTATTTGCACGACATCATAACAACTTAAAGGAGACAATCCAAGTGCAGCATCAGAACAACTCCGAAGAGGCAGATGTTCAAGTGCAATGTCGAAGCAACTTTGAATCCGGCATGAGAGCTCAAAAATGTAATATTGGATCTTTGGAGGGTACTGCTAGAAGCAATCAAGCAAGTGGTTATGATAATGGCTATCGAGTACTTGGAAAACAAGTTGATAATGGCCGAGACACTAGATCCTTGATACCAAGGGAAAAGTTTGGTTCATTTGTCAAGCCAAATTTTCAGTCCTGTTCCACAGAAATTAATGTCCAGAGGCAGCATCAGACAAACTATCTATTAGGCATAAGACCTCCAAATTACAATTGCAGATCTTTGGAGAGTCCTTTGAAAGGCAAAGAGAGAGCTCAATCTAATAATTGCCATCCATGGATCGAACATCAAGTTGATTGTGTTCGAGATGCAACAGGTCCATCATCTGAAATAGAAAGAGGAGCGAGGTTGACAGTACCAATCGAGTCAAGTTTTTCTTCCAATGTTTCCAGTCAGGTAGCTTCTTCCATGTATTTGACATTACCCTCTGTGTTAACTAGGCCCTATGGTGAGGACCCTATCCTTGGCACTTCTTCATATAGTTATATTCAACCAACAGTTGCCGGAAACAGATTAGGCATGAACTATGAGAAAGCAAACACAATGCTCAAAGTAAATGCTCATTATGGAAACTTTACAGGCATGAGTCACCAAGTAAGAAATGGAAGCATTGCTCAAGTAGGGTCCCAAAATGTGAGTTATAGTGATAGGCAAAGCATCCCTAGTTCAAGTATTGGAACTGGGTTCCCGGTTGCACTTCATCAAGGTATGGATTTTGGTGTTAGCTTTCCAAGCCAAGCAAGTATCGAATATCTTCCTCGAGATGAAAAGAACATAAGGGGTTTGAGGATGAATGAAGGAGCCAAAATGTTCTCCGGAGGAAGCTATGCTGTACCCGAAGACTATGTTTCCAACAATTTTTTCAGTCGTTCTATTAGTAAACCTCAAGGTACACTACAAGCATTTCAAAAAGAAAACCTTGAAAAGGGCAATATGTTCCCAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

583

Amino Acids

65.69

Weight (kDa)

7.32

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 625
AccIII TCCGGA 1 cut(s) 1619
AciI CCGC 2 cut(s) 86, 629
AclWI GGATC 4 cut(s) 387, 799, 882, 1091
AcoI YGGCCR 1 cut(s) 874
AcsI RAATTY 2 cut(s) 400, 931
AfaI GTAC 5 cut(s) 805, 852, 1161, 1638, 1696
AfiI CCNNNNNNNGG 4 cut(s) 19, 1043, 1268, 1729
AjuI GAANNNNNNNTTGG 4 cut(s) 468, 500, 1649, 1681
AloI GAACNNNNNNTCC 2 cut(s) 521, 553
AluBI AGCT 5 cut(s) 773, 1058, 1205, 1530, 1629
AluI AGCT 5 cut(s) 773, 1058, 1205, 1530, 1629
Alw21I GWGCWC 3 cut(s) 231, 775, 1060
Alw26I GTCTC 2 cut(s) 680, 873
Alw44I GTGCAC 1 cut(s) 227
AlwI GGATC 4 cut(s) 387, 799, 882, 1091
Ama87I CYCGRG 1 cut(s) 1563
Aor13HI TCCGGA 1 cut(s) 1619
AoxI GGCC 2 cut(s) 874, 1244
ApaLI GTGCAC 1 cut(s) 227
ApeKI GCWGC 3 cut(s) 335, 700, 970
ApoI RAATTY 2 cut(s) 400, 931
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
AseI ATTAAT 1 cut(s) 957
Asp700I GAANNNNTTC 1 cut(s) 1557
AspS9I GGNCC 4 cut(s) 1121, 1245, 1258, 1428
AsuC2I CCSGG 1 cut(s) 1493
AsuHPI GGTGA 4 cut(s) 20, 451, 1265, 1385
AvaI CYCGRG 1 cut(s) 1563
AvaII GGWCC 3 cut(s) 1121, 1258, 1428
AxyI CCTNAGG 1 cut(s) 14
BaeGI GKGCMC 1 cut(s) 231
BanI GGYRCC 1 cut(s) 625
BanII GRGCYC 2 cut(s) 775, 1060
BauI CACGAG 2 cut(s) 92, 175
BbsI GAAGAC 2 cut(s) 45, 1650
Bbv12I GWGCWC 3 cut(s) 231, 775, 1060
BbvI GCAGC 3 cut(s) 322, 712, 982
BccI CCATC 3 cut(s) 260, 1083, 1132
BcnI CCSGG 1 cut(s) 1493
BcoDI GTCTC 2 cut(s) 680, 873
BfaI CTAG 5 cut(s) 503, 810, 885, 1242, 1467
BglII AGATCT 1 cut(s) 1022
BisI GCNGC 5 cut(s) 87, 336, 629, 701, 971
BlsI GCNGC 5 cut(s) 88, 337, 630, 702, 972
BmcAI AGTACT 1 cut(s) 852
Bme1390I CCNGG 1 cut(s) 1493
Bme18I GGWCC 3 cut(s) 1121, 1258, 1428
BmeT110I CYCGRG 1 cut(s) 1563
BmgT120I GGNCC 4 cut(s) 1121, 1245, 1258, 1428
BmiI GGNNCC 6 cut(s) 627, 1260, 1429, 1430, 1490, 1606
BmrFI CCNGG 1 cut(s) 1493
BmrI ACTGGG 1 cut(s) 1494
BmsI GCATC 4 cut(s) 712, 982, 1102, 1470
BmuI ACTGGG 1 cut(s) 1494
BpiI GAAGAC 2 cut(s) 45, 1650
BplI GAGNNNNNCTC 4 cut(s) 169, 201, 268, 300
BpuEI CTTGAG 2 cut(s) 1404, 1674
BpuMI CCSGG 1 cut(s) 1493
BsaJI CCNNGG 5 cut(s) 339, 540, 899, 1079, 1267
BsaWI WCCGGW 1 cut(s) 1619
BsaXI ACNNNNNCTCC 4 cut(s) 507, 521, 537, 551
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 1043, 1268, 1729
Bse1I ACTGG 4 cut(s) 111, 318, 1194, 1489
Bse21I CCTNAGG 1 cut(s) 14
Bse3DI GCAATG 2 cut(s) 746, 1413
BseAI TCCGGA 1 cut(s) 1619
BseDI CCNNGG 5 cut(s) 339, 540, 899, 1079, 1267
BseGI GGATG 5 cut(s) 349, 420, 1075, 1461, 1599
BseLI CCNNNNNNNGG 4 cut(s) 19, 1043, 1268, 1729
BseMI GCAATG 2 cut(s) 746, 1413
BseMII CTCAG 2 cut(s) 5, 183
BseNI ACTGG 4 cut(s) 111, 318, 1194, 1489
BseRI GAGGAG 1 cut(s) 1158
BseSI GKGCMC 1 cut(s) 231
BseXI GCAGC 3 cut(s) 322, 712, 982
BsgI GTGCAG 1 cut(s) 719
BshFI GGCC 2 cut(s) 876, 1246
BshNI GGYRCC 1 cut(s) 625
BsiHKAI GWGCWC 3 cut(s) 231, 775, 1060
BsiHKCI CYCGRG 1 cut(s) 1563
BsiSI CCGG 4 cut(s) 762, 1308, 1493, 1620
BslFI GGGAC 1 cut(s) 1414
BslI CCNNNNNNNGG 4 cut(s) 19, 1043, 1268, 1729
BsmAI GTCTC 2 cut(s) 680, 873
BsmFI GGGAC 1 cut(s) 1414
BsnI GGCC 2 cut(s) 876, 1246
BsoBI CYCGRG 1 cut(s) 1563
Bsp1286I GDGCHC 3 cut(s) 231, 775, 1060
Bsp13I TCCGGA 1 cut(s) 1619
Bsp143I GATC 5 cut(s) 379, 791, 887, 1022, 1083
Bsp19I CCATGG 2 cut(s) 339, 1079
BspACI CCGC 2 cut(s) 86, 629
BspANI GGCC 2 cut(s) 876, 1246
BspCNI CTCAG 2 cut(s) 6, 184
BspEI TCCGGA 1 cut(s) 1619
BspHI TCATGA 2 cut(s) 262, 286
BspLI GGNNCC 6 cut(s) 627, 1260, 1429, 1430, 1490, 1606
BspPI GGATC 4 cut(s) 387, 799, 882, 1091
BspT107I GGYRCC 1 cut(s) 625
BsrDI GCAATG 2 cut(s) 746, 1413
BsrI ACTGG 4 cut(s) 111, 318, 1194, 1489
BssECI CCNNGG 5 cut(s) 339, 540, 899, 1079, 1267
BssMI GATC 5 cut(s) 379, 791, 887, 1022, 1083
BssSI CACGAG 2 cut(s) 92, 175
BssT1I CCWWGG 5 cut(s) 339, 540, 899, 1079, 1267
Bst2BI CACGAG 2 cut(s) 92, 175
Bst4CI ACNGT 2 cut(s) 1159, 1303
Bst6I CTCTTC 3 cut(s) 459, 570, 714
BstAPI GCANNNNNTGC 1 cut(s) 427
BstC8I GCNNGC 1 cut(s) 333
BstDEI CTNAG 2 cut(s) 14, 192
BstDSI CCRYGG 2 cut(s) 339, 1079
BstEII GGTNACC 1 cut(s) 8
BstENI CCTNNNNNAGG 2 cut(s) 1041, 1727
BstF5I GGATG 5 cut(s) 349, 420, 1075, 1461, 1599
BstKTI GATC 5 cut(s) 382, 794, 890, 1025, 1086
BstMAI GTCTC 2 cut(s) 680, 873
BstMBI GATC 5 cut(s) 379, 791, 887, 1022, 1083
BstMWI GCNNNNNNNGC 2 cut(s) 427, 1536
BstPI GGTNACC 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 1491
BstSLI GKGCMC 1 cut(s) 231
BstV1I GCAGC 3 cut(s) 322, 712, 982
BstV2I GAAGAC 2 cut(s) 45, 1650
BstX2I RGATCY 4 cut(s) 379, 791, 887, 1022
BstYI RGATCY 4 cut(s) 379, 791, 887, 1022
Bsu36I CCTNAGG 1 cut(s) 14
BsuRI GGCC 2 cut(s) 876, 1246
BtgI CCRYGG 2 cut(s) 339, 1079
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 5 cut(s) 349, 420, 1075, 1461, 1599
BtsIMutI CAGTG 1 cut(s) 325
Cac8I GCNNGC 1 cut(s) 333
CciI TCATGA 2 cut(s) 262, 286
Cfr13I GGNCC 4 cut(s) 1121, 1245, 1258, 1428
Csp6I GTAC 5 cut(s) 804, 851, 1160, 1637, 1695
CviQI GTAC 5 cut(s) 804, 851, 1160, 1637, 1695
DdeI CTNAG 2 cut(s) 14, 192
DpnI GATC 5 cut(s) 381, 793, 889, 1024, 1085
DpnII GATC 5 cut(s) 379, 791, 887, 1022, 1083
EaeI YGGCCR 1 cut(s) 874
Eam1104I CTCTTC 3 cut(s) 459, 570, 714
EarI CTCTTC 3 cut(s) 459, 570, 714
Ecl136II GAGCTC 2 cut(s) 773, 1058
Eco130I CCWWGG 5 cut(s) 339, 540, 899, 1079, 1267
Eco24I GRGCYC 2 cut(s) 775, 1060
Eco47I GGWCC 3 cut(s) 1121, 1258, 1428
Eco53kI GAGCTC 2 cut(s) 773, 1058
Eco81I CCTNAGG 1 cut(s) 14
Eco88I CYCGRG 1 cut(s) 1563
Eco91I GGTNACC 1 cut(s) 8
EcoICRI GAGCTC 2 cut(s) 773, 1058
EcoNI CCTNNNNNAGG 2 cut(s) 1041, 1727
EcoO109I RGGNCCY 3 cut(s) 1245, 1258, 1428
EcoO65I GGTNACC 1 cut(s) 8
EcoT14I CCWWGG 5 cut(s) 339, 540, 899, 1079, 1267
EcoT38I GRGCYC 2 cut(s) 775, 1060
ErhI CCWWGG 5 cut(s) 339, 540, 899, 1079, 1267
FalI AAGNNNNNCTT 4 cut(s) 1165, 1197, 1707, 1739
FaqI GGGAC 1 cut(s) 1414
Fnu4HI GCNGC 5 cut(s) 87, 336, 629, 701, 971
FokI GGATG 5 cut(s) 356, 427, 1062, 1448, 1606
FriOI GRGCYC 2 cut(s) 775, 1060
Fsp4HI GCNGC 5 cut(s) 87, 336, 629, 701, 971
FspBI CTAG 5 cut(s) 503, 810, 885, 1242, 1467
GluI GCNGC 5 cut(s) 87, 336, 629, 701, 971
HaeIII GGCC 2 cut(s) 876, 1246
HapII CCGG 4 cut(s) 762, 1308, 1493, 1620
HincII GTYRAC 2 cut(s) 1155, 1239
HindII GTYRAC 2 cut(s) 1155, 1239
HpaI GTTAAC 1 cut(s) 1239
HpaII CCGG 4 cut(s) 762, 1308, 1493, 1620
HphI GGTGA 4 cut(s) 20, 451, 1265, 1385
Hpy166II GTNNAC 6 cut(s) 229, 559, 1155, 1239, 1685, 1697
Hpy188I TCNGA 6 cut(s) 588, 612, 708, 718, 978, 1132
Hpy188III TCNNGA 9 cut(s) 92, 175, 263, 287, 464, 964, 1109, 1565, 1620
Hpy8I GTNNAC 6 cut(s) 229, 559, 1155, 1239, 1685, 1697
HpyAV CCTTC 3 cut(s) 28, 287, 1595
HpyCH4III ACNGT 2 cut(s) 1159, 1303
HpyCH4V TGCA 9 cut(s) 229, 430, 508, 662, 700, 739, 1020, 1115, 1499
HpyF10VI GCNNNNNNNGC 2 cut(s) 427, 1536
HpyF3I CTNAG 2 cut(s) 14, 192
KflI GGGWCCC 1 cut(s) 1428
Kpn2I TCCGGA 1 cut(s) 1619
KspAI GTTAAC 1 cut(s) 1239
Kzo9I GATC 5 cut(s) 379, 791, 887, 1022, 1083
LmnI GCTCC 2 cut(s) 1145, 1604
Lsp1109I GCAGC 3 cut(s) 322, 712, 982
LweI GCATC 4 cut(s) 712, 982, 1102, 1470
MaeI CTAG 5 cut(s) 503, 810, 885, 1242, 1467
MaeIII GTNAC 5 cut(s) 8, 172, 388, 439, 1391
MalI GATC 5 cut(s) 381, 793, 889, 1024, 1085
MboI GATC 5 cut(s) 379, 791, 887, 1022, 1083
MfeI CAATTG 1 cut(s) 1015
MflI RGATCY 4 cut(s) 379, 791, 887, 1022
MhlI GDGCHC 3 cut(s) 231, 775, 1060
MlyI GAGTC 6 cut(s) 59, 168, 374, 1042, 1178, 1399
MmeI TCCRAC 1 cut(s) 1680
MroI TCCGGA 1 cut(s) 1619
MroXI GAANNNNTTC 1 cut(s) 1557
MseI TTAA 6 cut(s) 198, 351, 384, 680, 957, 1238
MspI CCGG 4 cut(s) 762, 1308, 1493, 1620
MspR9I CCNGG 1 cut(s) 1493
MunI CAATTG 1 cut(s) 1015
MwoI GCNNNNNNNGC 2 cut(s) 427, 1536
NciI CCSGG 1 cut(s) 1493
NcoI CCATGG 2 cut(s) 339, 1079
NdeII GATC 5 cut(s) 379, 791, 887, 1022, 1083
NlaIV GGNNCC 6 cut(s) 627, 1260, 1429, 1430, 1490, 1606
NmeAIII GCCGAG 1 cut(s) 902
NmuCI GTSAC 5 cut(s) 8, 172, 388, 439, 1391
PaeR7I CTCGAG 1 cut(s) 1563
PagI TCATGA 2 cut(s) 262, 286
PcsI WCGNNNNNNNCGW 1 cut(s) 475
PdmI GAANNNNTTC 1 cut(s) 1557
PfeI GAWTC 5 cut(s) 65, 281, 357, 589, 758
PkrI GCNGC 5 cut(s) 88, 337, 630, 702, 972
PleI GAGTC 6 cut(s) 58, 167, 373, 1041, 1177, 1398
PpsI GAGTC 6 cut(s) 58, 167, 373, 1041, 1177, 1398
PpuMI RGGWCCY 2 cut(s) 1258, 1428
PshBI ATTAAT 1 cut(s) 957
Psp124BI GAGCTC 2 cut(s) 775, 1060
Psp5II RGGWCCY 2 cut(s) 1258, 1428
PspEI GGTNACC 1 cut(s) 8
PspN4I GGNNCC 6 cut(s) 627, 1260, 1429, 1430, 1490, 1606
PspPI GGNCC 4 cut(s) 1121, 1245, 1258, 1428
PspPPI RGGWCCY 2 cut(s) 1258, 1428
PsuI RGATCY 4 cut(s) 379, 791, 887, 1022
RsaI GTAC 5 cut(s) 805, 852, 1161, 1638, 1696
RsaNI GTAC 5 cut(s) 804, 851, 1160, 1637, 1695
SacI GAGCTC 2 cut(s) 775, 1060
SaqAI TTAA 6 cut(s) 198, 351, 384, 680, 957, 1238
SatI GCNGC 5 cut(s) 87, 336, 629, 701, 971
Sau3AI GATC 5 cut(s) 379, 791, 887, 1022, 1083
Sau96I GGNCC 4 cut(s) 1121, 1245, 1258, 1428
ScaI AGTACT 1 cut(s) 852
SchI GAGTC 6 cut(s) 59, 168, 374, 1042, 1178, 1399
ScrFI CCNGG 1 cut(s) 1493
SduI GDGCHC 3 cut(s) 231, 775, 1060
SfaNI GCATC 4 cut(s) 712, 982, 1102, 1470
Sfr274I CTCGAG 1 cut(s) 1563
SinI GGWCC 3 cut(s) 1121, 1258, 1428
SlaI CTCGAG 1 cut(s) 1563
SmlI CTYRAG 3 cut(s) 1419, 1563, 1689
SmoI CTYRAG 3 cut(s) 1419, 1563, 1689
SsiI CCGC 2 cut(s) 86, 629
SspI AATATT 2 cut(s) 583, 787
SspMI CTAG 5 cut(s) 503, 810, 885, 1242, 1467
SstI GAGCTC 2 cut(s) 775, 1060
StyD4I CCNGG 1 cut(s) 1491
StyI CCWWGG 5 cut(s) 339, 540, 899, 1079, 1267
TaaI ACNGT 2 cut(s) 1159, 1303
TaqI TCGA 7 cut(s) 745, 847, 1086, 1108, 1167, 1551, 1564
TatI WGTACW 1 cut(s) 850
TauI GCSGC 2 cut(s) 89, 631
TfiI GAWTC 5 cut(s) 65, 281, 357, 589, 758
Tru1I TTAA 6 cut(s) 198, 351, 384, 680, 957, 1238
Tru9I TTAA 6 cut(s) 198, 351, 384, 680, 957, 1238
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 5 cut(s) 8, 172, 388, 439, 1391
TseI GCWGC 3 cut(s) 335, 700, 970
Tsp45I GTSAC 5 cut(s) 8, 172, 388, 439, 1391
TspGWI ACGGA 1 cut(s) 484
TspRI CASTG 1 cut(s) 325
VneI GTGCAC 1 cut(s) 227
VpaK11BI GGWCC 3 cut(s) 1121, 1258, 1428
VspI ATTAAT 1 cut(s) 957
XagI CCTNNNNNAGG 2 cut(s) 1041, 1727
XapI RAATTY 2 cut(s) 400, 931
XcmI CCANNNNNNNNNTGG 1 cut(s) 1403
XhoI CTCGAG 1 cut(s) 1563
XmnI GAANNNNTTC 1 cut(s) 1557
XspI CTAG 5 cut(s) 503, 810, 885, 1242, 1467
ZrmI AGTACT 1 cut(s) 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.