Rroxscaffold_3G00263640

UFM1-specific

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0008045
Physical Location & Seq
Forward (+)
57532788 .. 57539367
6580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263640.1

Sequence Viewer

Length: 1932 bp
ATGGAGAAGGCAAGCGTTCGAGTTCTATGTCCTAAGCTTCTCCTCTACAGGAACGAACCAGCTGGCCTCCAATGGCTGATCGGATCCCCATTCTTCCCGCCACTCACCGTTGTCTCCACACTAAAATGCATCCACACCGATTCCTCCTCCTCATCTCCAGACTACACCAGAGAATCAGAAGAGCTTCGGACGTTACTGTTAAAAGGATTTCACGTCATCGGAGCTTTAATTGTGGCCAATTCCGACGAAGAGAAGCACGCCGGCGAGGCCATTGCTGCGGCGAGAAGGTTACGAAAGCTTGTGTGTGGTGGAAGTGAGAAATTGGATGAGCAGGAAGTAATTGGAGCTGTTGCAGAGTCTAAAGGTGGAGGCATTCGGTTTTTCGTGTCGAAATCGGAGAGTTCTAGGAGCTCTGAGTGTGTTGATGTGGTGTATGAAGATGATCCTGAGAAGTTTGTTTGGGAGAGGGGTTGTTTGATTCGATGTGAGCTTCCTTTGAAGCTGCCGATTTACTATCCAGTAAACAAGCCTTCTGATTCTGAACGGATCTTGCAGCGTGCAATTGAAGCAGTTGTTGCCAAGTTCAAAGACCCAAAGGCTGCATACCTGGTAGAAACTCTAAGCAAAACTTCATCTGAAGTACCTCAGCCTGTCATCATTCGTGGTGGAGATTTGGATTTTGACATGGATCTCTCAAATGTCAAACTTTTGGGTGAAAGCGGCCATGATTCTGATGCTAAGTTCTTGCCATGTTCTCATTTTTGTTTGGAGAGTAAAAAAGACTCCCGTGAGTATTCTGCTGAGCATGCAGATAGAATCCAAGTAAATATTCTGCTCAATAGTTCAGAGAAATCTCAAAAATCTACTGCACCTGTAGCAGAATATTTTCCAGCTCTGGAAGAAGTTAGAATTTTGGTTGTAGATTTCAAGCTAGAAGTGCTCTGTTACGCAGCCAAAGGTCTCCCACTGGAGCATGCAATTTCAAAGTTAGTCATCCCAGGGTTAGTTGATCAGTTAAATAGAGTAGGAAAGACTGTCCTGCCCAACCTCTTAGAGCAACATCCTCAGCTACATCCCTATCACTTTAATCCTCCTGGTTTTCTGCATCCGGTTACTGTTATTTATGAACTCAACTATGGCGAAACAGAGATGAAGCAAGTTGAAGTTAGGAAATCCCTACACTTAAGGCTGGGTTTACCTTGTGATCGTCCGCTTTTAAGAATTGCTAATGCTCTGGATTTCTTTGGCGTAAGGAGCGATCCAACACGAAAAGGTACTACTTTGCTTAAAGATGTACACATTGGGATTCCAAGCAGTGGAGTTTCAGGGGGCAGTGTGTCTCTGGTGCAAGGCTCTTATGAGTACTACCATTATCTACAAGATGGATTTAATGACTCGGGCTGGGGTTGTGCTTACCGTTCTCTTCAAACGATCATTTCATGGTTCAGACTCCAACACTATACATCTATAGATGTTCCCTTGCATAGGGAAATACAACAGTCACTTGTAGAGATTGGCGATAAGGATCCTTCTTTCATTGGGTCACGTGAATGGATTGGTGCCATTGAGTTGAGCTTTGTTCTGGACAAGCTTTTGGGAGTTAGTTGCAAAGTCATGAATTTTAGATCTGGAGCTGAGCTTCCTGAAAAATGTCGAGAGCTGGCTTTGCACTTTGAGAATCAAGGAACACCTATTATGATTGGTGGTGGAGTTCTTGCATATACCCTCTTGGGAGTTGATTACAATGACACAAGCGGAGACTGTGCGTTTCTTATACTTGATCCTCACTATACAGGCAACGATGAACACAAGAAAATAGTGAACGGTGGATGGTGTGGGTGGAAAAAGGCTGTTGATAGCAAGGGAAAGAGTTTCTTTTTGCATGATAAGTTCTACAATCTTCTGCTTCCACAGAGGCCTGATATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0016787 GO:0019538 GO:0019783 GO:0043170 GO:0044238 GO:0070011 GO:0071567 GO:0071704 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C78

Protein Analysis

643

Amino Acids

71.67

Weight (kDa)

5.96

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UfSP2_N PF20908 259 - 414 1.5e-11 Ubiquitin-fold modifier 1 specific protease 2, N-terminal
Peptidase_C78 PF07910 445 - 635 4.8e-67 Peptidase family C78
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1559
AccB7I CCANNNNNTGG 1 cut(s) 1316
AciI CCGC 5 cut(s) 98, 278, 720, 1211, 1755
AclWI GGATC 9 cut(s) 78, 91, 437, 554, 696, 1253, 1520, 1533, 1775
AcoI YGGCCR 2 cut(s) 234, 721
AcsI RAATTY 2 cut(s) 909, 1618
AcuI CTGAAG 1 cut(s) 657
AcvI CACGTG 1 cut(s) 1547
AfaI GTAC 4 cut(s) 642, 1276, 1296, 1364
AfiI CCNNNNNNNGG 2 cut(s) 1316, 1485
AflII CTTAAG 1 cut(s) 1183
AgsI TTSAA 7 cut(s) 499, 566, 586, 928, 984, 1163, 1427
AjiI CACGTC 1 cut(s) 214
AjnI CCWGG 3 cut(s) 606, 997, 1093
AjuI GAANNNNNNNTTGG 2 cut(s) 813, 845
Alw21I GWGCWC 2 cut(s) 413, 942
Alw26I GTCTC 4 cut(s) 118, 965, 1344, 1752
AlwI GGATC 9 cut(s) 78, 91, 437, 554, 696, 1253, 1520, 1533, 1775
Ama87I CYCGRG 1 cut(s) 1396
AoxI GGCC 5 cut(s) 64, 234, 267, 721, 1916
ApeKI GCWGC 5 cut(s) 275, 502, 553, 599, 950
ApoI RAATTY 2 cut(s) 909, 1618
Asp700I GAANNNNTTC 2 cut(s) 183, 885
AsuHPI GGTGA 2 cut(s) 97, 725
AvaI CYCGRG 1 cut(s) 1396
BalI TGGCCA 1 cut(s) 236
BamHI GGATCC 2 cut(s) 83, 1525
BanI GGYRCC 1 cut(s) 1559
BanII GRGCYC 1 cut(s) 413
BbrPI CACGTG 1 cut(s) 1547
Bbv12I GWGCWC 2 cut(s) 413, 942
BbvCI CCTCAGC 2 cut(s) 645, 1065
BbvI GCAGC 5 cut(s) 262, 489, 565, 586, 962
BccI CCATC 2 cut(s) 1376, 1824
BcgI CGANNNNNNTGC 2 cut(s) 254, 288
BciT130I CCWGG 3 cut(s) 608, 999, 1095
BclI TGATCA 1 cut(s) 1009
BcoDI GTCTC 4 cut(s) 118, 965, 1344, 1752
BfaI CTAG 2 cut(s) 405, 932
BfmI CTRYAG 3 cut(s) 46, 873, 1467
BfrI CTTAAG 1 cut(s) 1183
BglI GCCNNNNNGGC 1 cut(s) 266
BglII AGATCT 1 cut(s) 1625
BisI GCNGC 7 cut(s) 276, 279, 503, 554, 600, 721, 951
BlpI GCTNAGC 2 cut(s) 801, 1635
BlsI GCNGC 7 cut(s) 277, 280, 504, 555, 601, 722, 952
BmcAI AGTACT 1 cut(s) 1364
Bme1390I CCNGG 3 cut(s) 608, 999, 1095
BmeT110I CYCGRG 1 cut(s) 1396
BmgBI CACGTC 1 cut(s) 214
BmiI GGNNCC 3 cut(s) 85, 1527, 1561
BmrFI CCNGG 3 cut(s) 608, 999, 1095
BmsI GCATC 3 cut(s) 138, 724, 1114
BpmI CTGGAG 3 cut(s) 141, 989, 1650
Bpu10I CCTNAGC 3 cut(s) 33, 645, 1065
Bpu1102I GCTNAGC 2 cut(s) 801, 1635
BsaAI YACGTR 1 cut(s) 1547
BsaBI GATNNNNATC 1 cut(s) 1524
BsaI GGTCTC 1 cut(s) 965
BsaJI CCNNGG 2 cut(s) 997, 998
BsaWI WCCGGW 1 cut(s) 1108
Bsc4I CCNNNNNNNGG 2 cut(s) 1316, 1485
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 2 cut(s) 518, 972
Bse3DI GCAATG 1 cut(s) 270
Bse8I GATNNNNATC 1 cut(s) 1524
BseBI CCWGG 3 cut(s) 608, 999, 1095
BseDI CCNNGG 2 cut(s) 997, 998
BseGI GGATG 7 cut(s) 129, 331, 993, 1060, 1072, 1105, 1835
BseJI GATNNNNATC 1 cut(s) 1524
BseLI CCNNNNNNNGG 2 cut(s) 1316, 1485
BseMI GCAATG 1 cut(s) 270
BseMII CTCAG 6 cut(s) 405, 438, 659, 792, 1079, 1626
BseNI ACTGG 2 cut(s) 518, 972
BseRI GAGGAG 3 cut(s) 32, 136, 139
BseXI GCAGC 5 cut(s) 262, 489, 565, 586, 962
BseYI CCCAGC 2 cut(s) 1189, 1401
BsgI GTGCAG 1 cut(s) 852
BshFI GGCC 5 cut(s) 66, 236, 269, 723, 1918
BshNI GGYRCC 1 cut(s) 1559
BsiHKAI GWGCWC 2 cut(s) 413, 942
BsiHKCI CYCGRG 1 cut(s) 1396
BsiSI CCGG 2 cut(s) 261, 1109
BslI CCNNNNNNNGG 2 cut(s) 1316, 1485
BsmAI GTCTC 4 cut(s) 118, 965, 1344, 1752
BsmI GAATGC 1 cut(s) 372
BsnI GGCC 5 cut(s) 66, 236, 269, 723, 1918
Bso31I GGTCTC 1 cut(s) 965
BsoBI CYCGRG 1 cut(s) 1396
Bsp1286I GDGCHC 2 cut(s) 413, 942
Bsp1407I TGTACA 1 cut(s) 1294
Bsp1720I GCTNAGC 2 cut(s) 801, 1635
BspACI CCGC 5 cut(s) 98, 278, 720, 1211, 1755
BspANI GGCC 5 cut(s) 66, 236, 269, 723, 1918
BspCNI CTCAG 6 cut(s) 406, 439, 658, 793, 1078, 1627
BspHI TCATGA 1 cut(s) 1614
BspLI GGNNCC 3 cut(s) 85, 1527, 1561
BspPI GGATC 9 cut(s) 78, 91, 437, 554, 696, 1253, 1520, 1533, 1775
BspQI GCTCTTC 1 cut(s) 174
BspT107I GGYRCC 1 cut(s) 1559
BspTI CTTAAG 1 cut(s) 1183
BspTNI GGTCTC 1 cut(s) 965
BsrDI GCAATG 1 cut(s) 270
BsrFI RCCGGY 1 cut(s) 260
BsrGI TGTACA 1 cut(s) 1294
BsrI ACTGG 2 cut(s) 518, 972
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 2 cut(s) 997, 998
Bst2UI CCWGG 3 cut(s) 608, 999, 1095
Bst4CI ACNGT 8 cut(s) 109, 198, 1036, 1117, 1418, 1500, 1763, 1826
Bst6I CTCTTC 3 cut(s) 174, 243, 1428
BstAFI CTTAAG 1 cut(s) 1183
BstAPI GCANNNNNTGC 1 cut(s) 575
BstAUI TGTACA 1 cut(s) 1294
BstBAI YACGTR 1 cut(s) 1547
BstC8I GCNNGC 8 cut(s) 13, 64, 258, 262, 558, 807, 975, 1662
BstENI CCTNNNNNAGG 1 cut(s) 1483
BstF5I GGATG 7 cut(s) 129, 331, 993, 1060, 1072, 1105, 1835
BstMAI GTCTC 4 cut(s) 118, 965, 1344, 1752
BstMWI GCNNNNNNNGC 9 cut(s) 266, 275, 566, 575, 806, 875, 937, 1254, 1666
BstNI CCWGG 3 cut(s) 608, 999, 1095
BstNSI RCATGY 2 cut(s) 809, 977
BstSCI CCNGG 3 cut(s) 606, 997, 1093
BstSFI CTRYAG 3 cut(s) 46, 873, 1467
BstV1I GCAGC 5 cut(s) 262, 489, 565, 586, 962
BstX2I RGATCY 5 cut(s) 83, 546, 688, 1525, 1625
BstYI RGATCY 5 cut(s) 83, 546, 688, 1525, 1625
BsuRI GGCC 5 cut(s) 66, 236, 269, 723, 1918
BtrI CACGTC 1 cut(s) 214
BtsCI GGATG 7 cut(s) 129, 331, 993, 1060, 1072, 1105, 1835
BtsI GCAGTG 2 cut(s) 1321, 1339
BtsIMutI CAGTG 3 cut(s) 965, 1321, 1339
Cac8I GCNNGC 8 cut(s) 13, 64, 258, 262, 558, 807, 975, 1662
CciI TCATGA 1 cut(s) 1614
Cfr10I RCCGGY 1 cut(s) 260
CsiI ACCWGGT 1 cut(s) 606
Csp6I GTAC 4 cut(s) 641, 1275, 1295, 1363
CviAII CATG 8 cut(s) 685, 725, 750, 806, 974, 1440, 1615, 1883
CviQI GTAC 4 cut(s) 641, 1275, 1295, 1363
EaeI YGGCCR 2 cut(s) 234, 721
Eam1104I CTCTTC 3 cut(s) 174, 243, 1428
EarI CTCTTC 3 cut(s) 174, 243, 1428
Ecl136II GAGCTC 1 cut(s) 411
Eco147I AGGCCT 1 cut(s) 1918
Eco24I GRGCYC 1 cut(s) 413
Eco31I GGTCTC 1 cut(s) 965
Eco53kI GAGCTC 1 cut(s) 411
Eco57I CTGAAG 1 cut(s) 657
Eco72I CACGTG 1 cut(s) 1547
Eco88I CYCGRG 1 cut(s) 1396
EcoICRI GAGCTC 1 cut(s) 411
EcoNI CCTNNNNNAGG 1 cut(s) 1483
EcoRII CCWGG 3 cut(s) 606, 997, 1093
EcoT22I ATGCAT 1 cut(s) 131
EcoT38I GRGCYC 1 cut(s) 413
FaeI CATG 8 cut(s) 688, 728, 753, 809, 977, 1443, 1618, 1886
FalI AAGNNNNNCTT 4 cut(s) 613, 645, 1859, 1891
FatI CATG 8 cut(s) 684, 724, 749, 805, 973, 1439, 1614, 1882
FauI CCCGC 1 cut(s) 105
FbaI TGATCA 1 cut(s) 1009
Fnu4HI GCNGC 7 cut(s) 276, 279, 503, 554, 600, 721, 951
FokI GGATG 7 cut(s) 116, 338, 980, 1047, 1059, 1092, 1842
FriOI GRGCYC 1 cut(s) 413
Fsp4HI GCNGC 7 cut(s) 276, 279, 503, 554, 600, 721, 951
FspBI CTAG 2 cut(s) 405, 932
GluI GCNGC 7 cut(s) 276, 279, 503, 554, 600, 721, 951
GsaI CCCAGC 2 cut(s) 1193, 1405
GsuI CTGGAG 3 cut(s) 141, 989, 1650
HaeIII GGCC 5 cut(s) 66, 236, 269, 723, 1918
HapII CCGG 2 cut(s) 261, 1109
Hin1II CATG 8 cut(s) 688, 728, 753, 809, 977, 1443, 1618, 1886
HindIII AAGCTT 3 cut(s) 35, 296, 1589
HpaII CCGG 2 cut(s) 261, 1109
HphI GGTGA 2 cut(s) 97, 725
Hpy166II GTNNAC 4 cut(s) 523, 1196, 1297, 1822
Hpy188III TCNNGA 9 cut(s) 158, 446, 896, 1235, 1583, 1615, 1629, 1643, 1655
Hpy8I GTNNAC 4 cut(s) 523, 1196, 1297, 1822
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 3 cut(s) 279, 540, 1539
HpyCH4III ACNGT 8 cut(s) 109, 198, 1036, 1117, 1418, 1500, 1763, 1826
HpyCH4IV ACGT 3 cut(s) 191, 213, 1546
HpyF10VI GCNNNNNNNGC 9 cut(s) 266, 275, 566, 575, 806, 875, 937, 1254, 1666
HpySE526I ACGT 3 cut(s) 191, 213, 1546
Hsp92II CATG 8 cut(s) 688, 728, 753, 809, 977, 1443, 1618, 1886
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 1009
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 6 cut(s) 221, 344, 408, 970, 1254, 1631
Lsp1109I GCAGC 5 cut(s) 262, 489, 565, 586, 962
LweI GCATC 3 cut(s) 138, 724, 1114
MabI ACCWGGT 1 cut(s) 606
MaeI CTAG 2 cut(s) 405, 932
MaeII ACGT 3 cut(s) 191, 213, 1546
MaeIII GTNAC 6 cut(s) 192, 288, 944, 1111, 1500, 1542
MboII GAAGA 7 cut(s) 85, 191, 260, 449, 911, 1415, 1892
MfeI CAATTG 1 cut(s) 561
MflI RGATCY 5 cut(s) 83, 546, 688, 1525, 1625
MhlI GDGCHC 2 cut(s) 413, 942
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 9 cut(s) 228, 238, 320, 339, 561, 909, 978, 1221, 1618
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 4 cut(s) 365, 776, 1388, 1443
MmeI TCCRAC 3 cut(s) 267, 1286, 1477
Mox20I TGGCCA 1 cut(s) 236
Mph1103I ATGCAT 1 cut(s) 131
MreI CGCCGGCG 1 cut(s) 260
MroNI GCCGGC 1 cut(s) 260
MroXI GAANNNNTTC 2 cut(s) 183, 885
MscI TGGCCA 1 cut(s) 236
MseI TTAA 8 cut(s) 200, 227, 1016, 1086, 1184, 1217, 1287, 1389
MslI CAYNNNNRTG 2 cut(s) 124, 1549
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 1 cut(s) 62
MspCI CTTAAG 1 cut(s) 1183
MspI CCGG 2 cut(s) 261, 1109
MspR9I CCNGG 3 cut(s) 608, 999, 1095
MunI CAATTG 1 cut(s) 561
Mva1269I GAATGC 1 cut(s) 372
MvaI CCWGG 3 cut(s) 608, 999, 1095
MwoI GCNNNNNNNGC 9 cut(s) 266, 275, 566, 575, 806, 875, 937, 1254, 1666
NaeI GCCGGC 1 cut(s) 262
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 8 cut(s) 688, 728, 753, 809, 977, 1443, 1618, 1886
NlaIV GGNNCC 3 cut(s) 85, 1527, 1561
NmuCI GTSAC 2 cut(s) 1500, 1542
NsiI ATGCAT 1 cut(s) 131
NspI RCATGY 2 cut(s) 809, 977
PaeI GCATGC 2 cut(s) 809, 977
PagI TCATGA 1 cut(s) 1614
PasI CCCWGGG 1 cut(s) 998
PceI AGGCCT 1 cut(s) 1918
PciSI GCTCTTC 1 cut(s) 174
PctI GAATGC 1 cut(s) 372
PdiI GCCGGC 1 cut(s) 262
PdmI GAANNNNTTC 2 cut(s) 183, 885
PfeI GAWTC 8 cut(s) 140, 173, 478, 536, 728, 816, 1306, 1678
PflMI CCANNNNNTGG 1 cut(s) 1316
PkrI GCNGC 7 cut(s) 277, 280, 504, 555, 601, 722, 952
PleI GAGTC 4 cut(s) 364, 776, 1388, 1443
PmaCI CACGTG 1 cut(s) 1547
PmlI CACGTG 1 cut(s) 1547
PpsI GAGTC 4 cut(s) 364, 776, 1388, 1443
Ppu21I YACGTR 1 cut(s) 1547
Psp124BI GAGCTC 1 cut(s) 413
Psp6I CCWGG 3 cut(s) 606, 997, 1093
PspCI CACGTG 1 cut(s) 1547
PspFI CCCAGC 2 cut(s) 1189, 1401
PspGI CCWGG 3 cut(s) 606, 997, 1093
PspN4I GGNNCC 3 cut(s) 85, 1527, 1561
PsuI RGATCY 5 cut(s) 83, 546, 688, 1525, 1625
PvuII CAGCTG 1 cut(s) 62
RsaI GTAC 4 cut(s) 642, 1276, 1296, 1364
RsaNI GTAC 4 cut(s) 641, 1275, 1295, 1363
RseI CAYNNNNRTG 2 cut(s) 124, 1549
SacI GAGCTC 1 cut(s) 413
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 8 cut(s) 200, 227, 1016, 1086, 1184, 1217, 1287, 1389
SatI GCNGC 7 cut(s) 276, 279, 503, 554, 600, 721, 951
ScaI AGTACT 1 cut(s) 1364
SchI GAGTC 4 cut(s) 365, 776, 1388, 1443
ScrFI CCNGG 3 cut(s) 608, 999, 1095
SduI GDGCHC 2 cut(s) 413, 942
SexAI ACCWGGT 1 cut(s) 606
SfaNI GCATC 3 cut(s) 138, 724, 1114
SfcI CTRYAG 3 cut(s) 46, 873, 1467
SgrAI CRCCGGYG 1 cut(s) 260
SmiMI CAYNNNNRTG 2 cut(s) 124, 1549
SmlI CTYRAG 1 cut(s) 1183
SmoI CTYRAG 1 cut(s) 1183
SphI GCATGC 2 cut(s) 809, 977
Sse9I AATT 9 cut(s) 228, 238, 320, 339, 561, 909, 978, 1221, 1618
SseBI AGGCCT 1 cut(s) 1918
SsiI CCGC 5 cut(s) 98, 278, 720, 1211, 1755
SspI AATATT 2 cut(s) 829, 884
SspMI CTAG 2 cut(s) 405, 932
SstI GAGCTC 1 cut(s) 413
StuI AGGCCT 1 cut(s) 1918
StyD4I CCNGG 3 cut(s) 606, 997, 1093
TaaI ACNGT 8 cut(s) 109, 198, 1036, 1117, 1418, 1500, 1763, 1826
TaiI ACGT 3 cut(s) 194, 216, 1549
TaqI TCGA 4 cut(s) 19, 389, 481, 1654
TasI AATT 9 cut(s) 228, 238, 320, 339, 561, 909, 978, 1221, 1618
TatI WGTACW 2 cut(s) 1294, 1362
TauI GCSGC 2 cut(s) 281, 723
TfiI GAWTC 8 cut(s) 140, 173, 478, 536, 728, 816, 1306, 1678
Tru1I TTAA 8 cut(s) 200, 227, 1016, 1086, 1184, 1217, 1287, 1389
Tru9I TTAA 8 cut(s) 200, 227, 1016, 1086, 1184, 1217, 1287, 1389
TscAI CASTG 3 cut(s) 972, 1321, 1339
TseFI GTSAC 2 cut(s) 1500, 1542
TseI GCWGC 5 cut(s) 275, 502, 553, 599, 950
Tsp45I GTSAC 2 cut(s) 1500, 1542
TspDTI ATGAA 8 cut(s) 450, 621, 1140, 1166, 1428, 1525, 1631, 1818
TspGWI ACGGA 1 cut(s) 559
TspRI CASTG 3 cut(s) 972, 1321, 1339
Van91I CCANNNNNTGG 1 cut(s) 1316
Vha464I CTTAAG 1 cut(s) 1183
XagI CCTNNNNNAGG 1 cut(s) 1483
XapI RAATTY 2 cut(s) 909, 1618
XceI RCATGY 2 cut(s) 809, 977
XmnI GAANNNNTTC 2 cut(s) 183, 885
XspI CTAG 2 cut(s) 405, 932
ZrmI AGTACT 1 cut(s) 1364
Zsp2I ATGCAT 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.