Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0008045

Physical Location & Seq

Genomic Coordinates Reverse (-)

9664760 .. 9670183

Gene Structure 5424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG124900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGAGAAGGCAAGCGTTCGAGTTCTATGTCCTAAACTTCTCCTCTACAGGAACGAACCAGCTGGCCTCCAATGGCTGATCGGATCCCCATTCTTCCCGCCACTCACCGTCGTCTCCACACTAAAATGCATCCACACCGATTCCTCATCTCCAGACTACACCAGAGAATCAGAAGAGCTTCGGACGTTACTGTTAAAAGGATTTCACGTCATCGGAGCTTTAGTTGTGGCCAATTCCGACGAAGAGAAGCACGCCGGCGAGGCCATTGCTGCGGCGAGAAGGTTTCGAAAGCTTGTGTGTGGTGGAAGTGAGAAATTGGATGAGCAGGAAGTAATTGGAGGTGTTGCAGAGTTTAAAGGTGGAGGCATTCGGTTTTTCGTGTCGAAATTGGAGAGTTCTAGGAGCTTTGAGTGTGTTGATGTGGTGTATGAAGATGATCCTGAGAAGTTTGTTTGGGAGAGGGGTTGTTTGATTCGATGTGAGCTTCCTTTGAAGCTGCCGATTTACTATCCAGTAAACAAGCCTTCTGATTCCGAACGGATCTTGCAGCGTGCAATTGAAGCAGTTGTTGCCAAGTTCATAGACCCAAAGGCTGCATACCTGGTAGAAACTCTGAGCAAAACTTCATCTGAAGTACCTCAGCCTGTCATCATTCGTGGTGGAGATTTGGATTTTGACATGGATCTCTCAAATGTCAAACTTTTGGGTGAATGGGGCCATGATTCTGATGCTAAGTTCTTGCCATGTTCTCATTTTTGTTTGGAGAGTAAAAAAGACTCCCGCGAGTATTCTGCTGAGCATGCAGATAGAATCCAAGTAAATATTCTGCTGAATAGTTCAGAGAAATCTCAAAAATCTACTGCACCTGTAGCAGAATATTTTCCAGCTCTGGAAGAAGTTAGAATTTTGGTTGTAGATTTCAAGCTAGAAGTGCTCTGTTACGCAGCCAAAGGTCTCCCACTGGTGCATGCAGTTTCAAAGTTAGTCATCCCAGGGTTAGTTGATCAGTTAAATAGAGTAGGAAAGACTGTCCTGCCCAACCTCTTAGAGCAACGTCCTCAGCTACATCCCTATCACTTTAATCCTCCTGGTTTTCTGCATCCGATTACTGTTATTTATGAACTCAACTATGGCGAAACAGAGATGAAGCAGGTTGAAGTTAGGAAATCCCTACACTTAAGGCTGGGTTTACCTTGTGATCGTCCGCTTTTAAGAATTGCTAATGCTCTGGATTTCTCTGGCGTAAGGAGCGACCCAACACGAAAAGGTACTACTTTGCTTAAAGATGTACACATTGGGATTCCAAGCAGTGGAGTTTCAGGGGGCAGTGTGTCTCTGGTGCAAGGCTCTTATGAGTACTACCATTATCTACAAGATGGATTTAATGACTCGGGCTGGGGTTGTGCTTACCGTTCTCTTCAAACGATCATTTCATGGTTCAGACTTCAACACTATACATCTATAGATGTTCCCTTGCATAGGGAAATACAACAGTCACTTGTAGAGATTGGCGATAAGGATCCTTCTTTCATTGGGTCACGTGAATGGATTGGTGCCATTGAGTTGAGCTTTGTTCTGGACAAGCTTTTGGGAGTTAGTTGCAAAGTCATGAATTTTAGATCTGGAGCTGAGCTTCCCGAAAAATGTCGAGAGCTGGCTTTGCACTTTGAGAATCAAGGAACACCTATTATGATTGGTGGTGGAGTTCTTGCATATACCCTCTTGGGAGTTGATTACAATGACGCAAGCGGAGACTGTGCGTTTCTTATACTTGATCCTCACTATACAGGCAACGATGAACACAAGAAAATAGTGAACGGTGGATGGTGTGGTTGGAAAAAGGCTGTTGATAGCAAGGGAAAGAGTTTCTTTTTGCATGATAAGTTCTACAATCTTCTGCTTCCACAGAGGCCTGATATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0016787 GO:0019538 GO:0019783 GO:0043170 GO:0044238 GO:0070011 GO:0071567 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C78

Protein Analysis

641

Amino Acids

71.63

Weight (kDa)

5.99

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UfSP2_N	PF20908	257 - 413	9.2e-12	Ubiquitin-fold modifier 1 specific protease 2, N-terminal
Peptidase_C78	PF07910	443 - 633	5.5e-67	Peptidase family C78

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48380 AT3G48380 AT3G48380
fragaria_vesca	FvH4_5g06921 FvH4_5g06950 FvH4_5g06990 FvH4_5g06990 FvH4_5g06990
malus_domestica	MD06G1160100.v1.1 MD14G1166100.v1.1
prunus_persica	Prupe.5G160400_v2.0.a1
pyrus_communis	pycom14g13880
rosa_chinensis	RchiOBHm_Chr7g0191691
rosa_laevigata	RLG00000004433
rosa_multiflora	Rmu_sc0001123.1_g000012 Rmu_sc0018746.1_g000004
rosa_roxburghii	Rroxscaffold_157G00438510 Rroxscaffold_3G00263640
rosa_rugosa	Rorug06G0511000
rosa_samantha	Rh7AG120200 Rh7BG122300 Rh7CG124900 Rh7DG123100
rosa_wichuraiana	Rw7G010230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1141
AccB1I	GGYRCC	1 cut(s)	1553
AccB7I	CCANNNNNTGG	1 cut(s)	1310
AccII	CGCG	1 cut(s)	783
AciI	CCGC	5 cut(s)	98, 272, 781, 1205, 1749
AclWI	GGATC	8 cut(s)	78, 91, 431, 548, 690, 1514, 1527, 1769
AcoI	YGGCCR	1 cut(s)	228
AcsI	RAATTY	2 cut(s)	903, 1612
AcuI	CTGAAG	1 cut(s)	651
AcvI	CACGTG	1 cut(s)	1541
AfaI	GTAC	4 cut(s)	636, 1270, 1290, 1358
AfiI	CCNNNNNNNGG	2 cut(s)	1310, 1479
AflII	CTTAAG	1 cut(s)	1177
AgsI	TTSAA	7 cut(s)	493, 560, 922, 978, 1157, 1421, 1448
AjiI	CACGTC	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	600, 991, 1087
AjuI	GAANNNNNNNTTGG	2 cut(s)	807, 839
Alw21I	GWGCWC	1 cut(s)	936
Alw26I	GTCTC	4 cut(s)	118, 959, 1338, 1746
AlwI	GGATC	8 cut(s)	78, 91, 431, 548, 690, 1514, 1527, 1769
Ama87I	CYCGRG	1 cut(s)	1390
AoxI	GGCC	5 cut(s)	64, 228, 261, 715, 1910
ApeKI	GCWGC	5 cut(s)	269, 496, 547, 593, 944
ApoI	RAATTY	2 cut(s)	903, 1612
Asp700I	GAANNNNTTC	2 cut(s)	177, 879
AspS9I	GGNCC	1 cut(s)	715
AsuHPI	GGTGA	2 cut(s)	97, 719
AsuII	TTCGAA	1 cut(s)	286
AvaI	CYCGRG	1 cut(s)	1390
BalI	TGGCCA	1 cut(s)	230
BamHI	GGATCC	2 cut(s)	83, 1519
BanI	GGYRCC	1 cut(s)	1553
BbrPI	CACGTG	1 cut(s)	1541
Bbv12I	GWGCWC	1 cut(s)	936
BbvCI	CCTCAGC	2 cut(s)	639, 1059
BbvI	GCAGC	5 cut(s)	256, 483, 559, 580, 956
BccI	CCATC	2 cut(s)	1370, 1818
BcgI	CGANNNNNNTGC	4 cut(s)	248, 282, 773, 807
BciT130I	CCWGG	3 cut(s)	602, 993, 1089
BclI	TGATCA	1 cut(s)	1003
BcoDI	GTCTC	4 cut(s)	118, 959, 1338, 1746
BfaI	CTAG	2 cut(s)	399, 926
BfmI	CTRYAG	3 cut(s)	46, 867, 1461
BfrI	CTTAAG	1 cut(s)	1177
BfuAI	ACCTGC	1 cut(s)	1141
BglI	GCCNNNNNGGC	1 cut(s)	260
BglII	AGATCT	1 cut(s)	1619
BisI	GCNGC	6 cut(s)	270, 273, 497, 548, 594, 945
BlpI	GCTNAGC	2 cut(s)	795, 1629
BlsI	GCNGC	6 cut(s)	271, 274, 498, 549, 595, 946
BmcAI	AGTACT	1 cut(s)	1358
Bme1390I	CCNGG	3 cut(s)	602, 993, 1089
BmeT110I	CYCGRG	1 cut(s)	1390
BmgBI	CACGTC	1 cut(s)	208
BmgT120I	GGNCC	1 cut(s)	715
BmiI	GGNNCC	4 cut(s)	85, 716, 1521, 1555
BmrFI	CCNGG	3 cut(s)	602, 993, 1089
BmsI	GCATC	3 cut(s)	138, 718, 1108
BpmI	CTGGAG	2 cut(s)	135, 1644
Bpu10I	CCTNAGC	2 cut(s)	639, 1059
Bpu1102I	GCTNAGC	2 cut(s)	795, 1629
Bpu14I	TTCGAA	1 cut(s)	286
BsaAI	YACGTR	1 cut(s)	1541
BsaBI	GATNNNNATC	1 cut(s)	1518
BsaI	GGTCTC	1 cut(s)	959
BsaJI	CCNNGG	2 cut(s)	991, 992
BsaXI	ACNNNNNCTCC	2 cut(s)	207, 237
Bsc4I	CCNNNNNNNGG	2 cut(s)	1310, 1479
Bse118I	RCCGGY	1 cut(s)	254
Bse1I	ACTGG	2 cut(s)	512, 966
Bse3DI	GCAATG	1 cut(s)	264
Bse8I	GATNNNNATC	1 cut(s)	1518
BseBI	CCWGG	3 cut(s)	602, 993, 1089
BseDI	CCNNGG	2 cut(s)	991, 992
BseGI	GGATG	6 cut(s)	129, 325, 987, 1066, 1099, 1829
BseJI	GATNNNNATC	1 cut(s)	1518
BseLI	CCNNNNNNNGG	2 cut(s)	1310, 1479
BseMI	GCAATG	1 cut(s)	264
BseMII	CTCAG	6 cut(s)	432, 605, 653, 786, 1073, 1620
BseNI	ACTGG	2 cut(s)	512, 966
BseRI	GAGGAG	1 cut(s)	32
BseXI	GCAGC	5 cut(s)	256, 483, 559, 580, 956
BseYI	CCCAGC	2 cut(s)	1183, 1395
BsgI	GTGCAG	1 cut(s)	846
Bsh1236I	CGCG	1 cut(s)	783
BshFI	GGCC	5 cut(s)	66, 230, 263, 717, 1912
BshNI	GGYRCC	1 cut(s)	1553
BsiHKAI	GWGCWC	1 cut(s)	936
BsiHKCI	CYCGRG	1 cut(s)	1390
BsiSI	CCGG	1 cut(s)	255
BslI	CCNNNNNNNGG	2 cut(s)	1310, 1479
BsmAI	GTCTC	4 cut(s)	118, 959, 1338, 1746
BsmBI	CGTCTC	1 cut(s)	118
BsmI	GAATGC	1 cut(s)	366
BsnI	GGCC	5 cut(s)	66, 230, 263, 717, 1912
Bso31I	GGTCTC	1 cut(s)	959
BsoBI	CYCGRG	1 cut(s)	1390
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	1 cut(s)	936
Bsp1407I	TGTACA	1 cut(s)	1288
Bsp1720I	GCTNAGC	2 cut(s)	795, 1629
BspACI	CCGC	5 cut(s)	98, 272, 781, 1205, 1749
BspANI	GGCC	5 cut(s)	66, 230, 263, 717, 1912
BspCNI	CTCAG	6 cut(s)	433, 606, 652, 787, 1072, 1621
BspFNI	CGCG	1 cut(s)	783
BspHI	TCATGA	1 cut(s)	1608
BspLI	GGNNCC	4 cut(s)	85, 716, 1521, 1555
BspMI	ACCTGC	1 cut(s)	1141
BspPI	GGATC	8 cut(s)	78, 91, 431, 548, 690, 1514, 1527, 1769
BspQI	GCTCTTC	1 cut(s)	168
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	1553
BspTI	CTTAAG	1 cut(s)	1177
BspTNI	GGTCTC	1 cut(s)	959
BsrDI	GCAATG	1 cut(s)	264
BsrFI	RCCGGY	1 cut(s)	254
BsrGI	TGTACA	1 cut(s)	1288
BsrI	ACTGG	2 cut(s)	512, 966
BssAI	RCCGGY	1 cut(s)	254
BssECI	CCNNGG	2 cut(s)	991, 992
Bst2UI	CCWGG	3 cut(s)	602, 993, 1089
Bst4CI	ACNGT	8 cut(s)	109, 192, 1030, 1111, 1412, 1494, 1757, 1820
Bst6I	CTCTTC	3 cut(s)	168, 237, 1422
BstAFI	CTTAAG	1 cut(s)	1177
BstAPI	GCANNNNNTGC	1 cut(s)	569
BstAUI	TGTACA	1 cut(s)	1288
BstBAI	YACGTR	1 cut(s)	1541
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	9 cut(s)	13, 64, 252, 256, 552, 801, 969, 1656, 1747
BstDEI	CTNAG	8 cut(s)	441, 614, 639, 732, 795, 1045, 1059, 1629
BstENI	CCTNNNNNAGG	1 cut(s)	1477
BstF5I	GGATG	6 cut(s)	129, 325, 987, 1066, 1099, 1829
BstFNI	CGCG	1 cut(s)	783
BstMAI	GTCTC	4 cut(s)	118, 959, 1338, 1746
BstMWI	GCNNNNNNNGC	9 cut(s)	260, 269, 560, 569, 800, 869, 931, 1248, 1660
BstNI	CCWGG	3 cut(s)	602, 993, 1089
BstNSI	RCATGY	2 cut(s)	803, 971
BstSCI	CCNGG	3 cut(s)	600, 991, 1087
BstSFI	CTRYAG	3 cut(s)	46, 867, 1461
BstUI	CGCG	1 cut(s)	783
BstV1I	GCAGC	5 cut(s)	256, 483, 559, 580, 956
BstX2I	RGATCY	5 cut(s)	83, 540, 682, 1519, 1619
BstYI	RGATCY	5 cut(s)	83, 540, 682, 1519, 1619
BsuRI	GGCC	5 cut(s)	66, 230, 263, 717, 1912
BtrI	CACGTC	1 cut(s)	208
BtsCI	GGATG	6 cut(s)	129, 325, 987, 1066, 1099, 1829
BtsI	GCAGTG	2 cut(s)	1315, 1333
BtsIMutI	CAGTG	3 cut(s)	959, 1315, 1333
BveI	ACCTGC	1 cut(s)	1141
Cac8I	GCNNGC	9 cut(s)	13, 64, 252, 256, 552, 801, 969, 1656, 1747
CciI	TCATGA	1 cut(s)	1608
Cfr10I	RCCGGY	1 cut(s)	254
Cfr13I	GGNCC	1 cut(s)	715
CseI	GACGC	1 cut(s)	1751
CsiI	ACCWGGT	1 cut(s)	600
Csp6I	GTAC	4 cut(s)	635, 1269, 1289, 1357
CviAII	CATG	8 cut(s)	679, 719, 744, 800, 968, 1434, 1609, 1877
CviQI	GTAC	4 cut(s)	635, 1269, 1289, 1357
DdeI	CTNAG	8 cut(s)	441, 614, 639, 732, 795, 1045, 1059, 1629
DraI	TTTAAA	1 cut(s)	355
EaeI	YGGCCR	1 cut(s)	228
Eam1104I	CTCTTC	3 cut(s)	168, 237, 1422
EarI	CTCTTC	3 cut(s)	168, 237, 1422
Eco147I	AGGCCT	1 cut(s)	1912
Eco31I	GGTCTC	1 cut(s)	959
Eco57I	CTGAAG	1 cut(s)	651
Eco72I	CACGTG	1 cut(s)	1541
Eco88I	CYCGRG	1 cut(s)	1390
EcoNI	CCTNNNNNAGG	1 cut(s)	1477
EcoRII	CCWGG	3 cut(s)	600, 991, 1087
EcoT22I	ATGCAT	1 cut(s)	131
Esp3I	CGTCTC	1 cut(s)	118
FaeI	CATG	8 cut(s)	682, 722, 747, 803, 971, 1437, 1612, 1880
FalI	AAGNNNNNCTT	2 cut(s)	1853, 1885
FatI	CATG	8 cut(s)	678, 718, 743, 799, 967, 1433, 1608, 1876
FauI	CCCGC	2 cut(s)	105, 788
FbaI	TGATCA	1 cut(s)	1003
Fnu4HI	GCNGC	6 cut(s)	270, 273, 497, 548, 594, 945
FokI	GGATG	6 cut(s)	116, 332, 974, 1053, 1086, 1836
Fsp4HI	GCNGC	6 cut(s)	270, 273, 497, 548, 594, 945
FspBI	CTAG	2 cut(s)	399, 926
GluI	GCNGC	6 cut(s)	270, 273, 497, 548, 594, 945
GsaI	CCCAGC	2 cut(s)	1187, 1399
GsuI	CTGGAG	2 cut(s)	135, 1644
HaeIII	GGCC	5 cut(s)	66, 230, 263, 717, 1912
HapII	CCGG	1 cut(s)	255
HgaI	GACGC	1 cut(s)	1751
Hin1II	CATG	8 cut(s)	682, 722, 747, 803, 971, 1437, 1612, 1880
HindIII	AAGCTT	2 cut(s)	290, 1583
HpaII	CCGG	1 cut(s)	255
HphI	GGTGA	2 cut(s)	97, 719
Hpy166II	GTNNAC	4 cut(s)	517, 1190, 1291, 1816
Hpy188III	TCNNGA	9 cut(s)	152, 440, 890, 1229, 1577, 1609, 1623, 1637, 1649
Hpy8I	GTNNAC	4 cut(s)	517, 1190, 1291, 1816
Hpy99I	CGWCG	2 cut(s)	113, 242
HpyAV	CCTTC	3 cut(s)	273, 534, 1533
HpyCH4III	ACNGT	8 cut(s)	109, 192, 1030, 1111, 1412, 1494, 1757, 1820
HpyCH4IV	ACGT	4 cut(s)	185, 207, 1054, 1540
HpyF10VI	GCNNNNNNNGC	9 cut(s)	260, 269, 560, 569, 800, 869, 931, 1248, 1660
HpyF3I	CTNAG	8 cut(s)	441, 614, 639, 732, 795, 1045, 1059, 1629
HpySE526I	ACGT	4 cut(s)	185, 207, 1054, 1540
Hsp92II	CATG	8 cut(s)	682, 722, 747, 803, 971, 1437, 1612, 1880
KroI	GCCGGC	1 cut(s)	254
KroNI	GCCGGC	1 cut(s)	256
Ksp22I	TGATCA	1 cut(s)	1003
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	4 cut(s)	215, 402, 1248, 1625
Lsp1109I	GCAGC	5 cut(s)	256, 483, 559, 580, 956
LweI	GCATC	3 cut(s)	138, 718, 1108
MabI	ACCWGGT	1 cut(s)	600
MaeI	CTAG	2 cut(s)	399, 926
MaeII	ACGT	4 cut(s)	185, 207, 1054, 1540
MaeIII	GTNAC	4 cut(s)	186, 938, 1494, 1536
MboII	GAAGA	7 cut(s)	85, 185, 254, 443, 905, 1409, 1886
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	5 cut(s)	83, 540, 682, 1519, 1619
MhlI	GDGCHC	1 cut(s)	936
MlsI	TGGCCA	1 cut(s)	230
MluCI	AATT	8 cut(s)	232, 314, 333, 386, 555, 903, 1215, 1612
MluNI	TGGCCA	1 cut(s)	230
MlyI	GAGTC	2 cut(s)	770, 1382
MmeI	TCCRAC	2 cut(s)	261, 1814
Mox20I	TGGCCA	1 cut(s)	230
Mph1103I	ATGCAT	1 cut(s)	131
MreI	CGCCGGCG	1 cut(s)	254
MroNI	GCCGGC	1 cut(s)	254
MroXI	GAANNNNTTC	2 cut(s)	177, 879
MscI	TGGCCA	1 cut(s)	230
MseI	TTAA	8 cut(s)	194, 354, 1010, 1080, 1178, 1211, 1281, 1383
MslI	CAYNNNNRTG	2 cut(s)	124, 1543
Msp20I	TGGCCA	1 cut(s)	230
MspA1I	CMGCKG	1 cut(s)	62
MspCI	CTTAAG	1 cut(s)	1177
MspI	CCGG	1 cut(s)	255
MspR9I	CCNGG	3 cut(s)	602, 993, 1089
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	366
MvaI	CCWGG	3 cut(s)	602, 993, 1089
MvnI	CGCG	1 cut(s)	783
MwoI	GCNNNNNNNGC	9 cut(s)	260, 269, 560, 569, 800, 869, 931, 1248, 1660
NaeI	GCCGGC	1 cut(s)	256
NgoMIV	GCCGGC	1 cut(s)	254
NlaIII	CATG	8 cut(s)	682, 722, 747, 803, 971, 1437, 1612, 1880
NlaIV	GGNNCC	4 cut(s)	85, 716, 1521, 1555
NmuCI	GTSAC	2 cut(s)	1494, 1536
NsiI	ATGCAT	1 cut(s)	131
NspI	RCATGY	2 cut(s)	803, 971
NspV	TTCGAA	1 cut(s)	286
PaeI	GCATGC	2 cut(s)	803, 971
PagI	TCATGA	1 cut(s)	1608
PasI	CCCWGGG	1 cut(s)	992
PceI	AGGCCT	1 cut(s)	1912
PciSI	GCTCTTC	1 cut(s)	168
PctI	GAATGC	1 cut(s)	366
PdiI	GCCGGC	1 cut(s)	256
PdmI	GAANNNNTTC	2 cut(s)	177, 879
PfeI	GAWTC	8 cut(s)	140, 167, 472, 530, 722, 810, 1300, 1672
PflMI	CCANNNNNTGG	1 cut(s)	1310
PkrI	GCNGC	6 cut(s)	271, 274, 498, 549, 595, 946
PleI	GAGTC	2 cut(s)	770, 1382
PmaCI	CACGTG	1 cut(s)	1541
PmlI	CACGTG	1 cut(s)	1541
PpsI	GAGTC	2 cut(s)	770, 1382
Ppu21I	YACGTR	1 cut(s)	1541
Psp6I	CCWGG	3 cut(s)	600, 991, 1087
PspCI	CACGTG	1 cut(s)	1541
PspFI	CCCAGC	2 cut(s)	1183, 1395
PspGI	CCWGG	3 cut(s)	600, 991, 1087
PspN4I	GGNNCC	4 cut(s)	85, 716, 1521, 1555
PspPI	GGNCC	1 cut(s)	715
PsuI	RGATCY	5 cut(s)	83, 540, 682, 1519, 1619
PvuII	CAGCTG	1 cut(s)	62
RsaI	GTAC	4 cut(s)	636, 1270, 1290, 1358
RsaNI	GTAC	4 cut(s)	635, 1269, 1289, 1357
RseI	CAYNNNNRTG	2 cut(s)	124, 1543
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	8 cut(s)	194, 354, 1010, 1080, 1178, 1211, 1281, 1383
SatI	GCNGC	6 cut(s)	270, 273, 497, 548, 594, 945
Sau96I	GGNCC	1 cut(s)	715
ScaI	AGTACT	1 cut(s)	1358
SchI	GAGTC	2 cut(s)	770, 1382
ScrFI	CCNGG	3 cut(s)	602, 993, 1089
SduI	GDGCHC	1 cut(s)	936
SexAI	ACCWGGT	1 cut(s)	600
SfaNI	GCATC	3 cut(s)	138, 718, 1108
SfcI	CTRYAG	3 cut(s)	46, 867, 1461
SfuI	TTCGAA	1 cut(s)	286
SgrAI	CRCCGGYG	1 cut(s)	254
SmiMI	CAYNNNNRTG	2 cut(s)	124, 1543
SmlI	CTYRAG	1 cut(s)	1177
SmoI	CTYRAG	1 cut(s)	1177
SphI	GCATGC	2 cut(s)	803, 971
Sse9I	AATT	8 cut(s)	232, 314, 333, 386, 555, 903, 1215, 1612
SseBI	AGGCCT	1 cut(s)	1912
SsiI	CCGC	5 cut(s)	98, 272, 781, 1205, 1749
SspI	AATATT	2 cut(s)	823, 878
SspMI	CTAG	2 cut(s)	399, 926
StuI	AGGCCT	1 cut(s)	1912
StyD4I	CCNGG	3 cut(s)	600, 991, 1087
TaaI	ACNGT	8 cut(s)	109, 192, 1030, 1111, 1412, 1494, 1757, 1820
TaiI	ACGT	4 cut(s)	188, 210, 1057, 1543
TaqI	TCGA	5 cut(s)	19, 286, 383, 475, 1648
TasI	AATT	8 cut(s)	232, 314, 333, 386, 555, 903, 1215, 1612
TatI	WGTACW	2 cut(s)	1288, 1356
TauI	GCSGC	1 cut(s)	275
TfiI	GAWTC	8 cut(s)	140, 167, 472, 530, 722, 810, 1300, 1672
Tru1I	TTAA	8 cut(s)	194, 354, 1010, 1080, 1178, 1211, 1281, 1383
Tru9I	TTAA	8 cut(s)	194, 354, 1010, 1080, 1178, 1211, 1281, 1383
TscAI	CASTG	3 cut(s)	966, 1315, 1333
TseFI	GTSAC	2 cut(s)	1494, 1536
TseI	GCWGC	5 cut(s)	269, 496, 547, 593, 944
Tsp45I	GTSAC	2 cut(s)	1494, 1536
TspDTI	ATGAA	9 cut(s)	444, 568, 615, 1134, 1160, 1422, 1519, 1625, 1812
TspGWI	ACGGA	1 cut(s)	553
TspRI	CASTG	3 cut(s)	966, 1315, 1333
Van91I	CCANNNNNTGG	1 cut(s)	1310
Vha464I	CTTAAG	1 cut(s)	1177
XagI	CCTNNNNNAGG	1 cut(s)	1477
XapI	RAATTY	2 cut(s)	903, 1612
XceI	RCATGY	2 cut(s)	803, 971
XmnI	GAANNNNTTC	2 cut(s)	177, 879
XspI	CTAG	2 cut(s)	399, 926
ZrmI	AGTACT	1 cut(s)	1358
Zsp2I	ATGCAT	1 cut(s)	131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.