Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0004481

Physical Location & Seq

Genomic Coordinates Forward (+)

57974433 .. 57977991

Gene Structure 3559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCGACCTCGGCGTTCAAATCGACGACGAAGCGGACGCCGATCGGGAGCTCTTCTGCTCCGGCGGAGGACTCGGCTTCCGTTAATCGGTCTCACCGGCGCTCGCGTAGCCTCAGCTGCTTCTCACGCCGGCTGCCGGAGCCGCCGGCCGAGGAATTTGAAGTCAATCCGACTCCCAGGAGGAAGTTTGTGAACACGGTCAGGGGCTCGGGGTTCCCGGAGATTAGTCTTGATGACTTGGCGATTGAGCTGTTTGATTCTGGCTCGGATGAGAGAGGAGGACGCTCGGCGTTGAGGAGTTCCGAAACTACCCCTGCCCAGAGGCGGGGGAGGTCGGTGTCGAGGCACGGCCCGAGGGTGAGCGGCGGCGGTGGTGAGACGAGGGGCCGTGCTGGTAATAGCTCAGGTGGAGGGAGGGTAGTTTCGGAAAGTAAGGGAAATTTGAGGCAAAGGCGATCGGTTTCTGTTGCTCGGTATCAGATGAGCGATTCCGAGAGTGATCTCGATCATACTCATCATCGTAGCACTGCTAAGTCGAAGAACTTCACTAGCGGTAACAGCCAGACGCCCTTGTCCCGTAAGTCATTGGATTCAAATTATAGGCCAGGATTGAGAAGGTCACTTAGCCAAAAAGATTTGAAGTGCCATGATGGTTACTCTAGCCAGTCTTCTGTCCTAACTGATGATGAGGGGAAGGATGCTTATATCTATAAAAATGGGGCTGAGAAGACTATACGAGCTGTATATTCAGAGAAGAAGGCAGAGCACCCTGCTGGTAATGATATGAAAAGTGGACTTTATGAAGTAATGCGAAAAGAACTTAGACATGCTGTGGAAGAGATTAGGACAGAACTTGAACATGAAAAGGGCAAAACAAAATCTACTGTTCTAGCACCTGGTGATTCCTTGCGATCTAACGGTTCAGATGTACTTCAGGCTGTTTCTTCAATCAGGAAGAATTATTCTTCCAAGTTGGAACAGTCAGAAAAGCGTAAACAAGATTTATTAGCAGAAATAGTGCTGGAGGAACAACATAGTAGGGAACTGTCAAAGATTGTAAAAGAATTGCTCCCTGAGCCAAAGAAAATTGTCAGTCCAGACAGACCGTCACGAACTAGAAGGAGGAGCAATGACAAAGGTAGGGTGTCTAAGCGATTGACTGAGGAAGCAGAAAGATATATTGAGGACTTCATTTCAAATGTTGAAGACACAGATATATCATCACTTGATGGTGAAAGAAGTGATACAAGTTCGAGCTTAGGAGGAATAATGAAGGGCGAAACTTTTCAGAGTCCAGCCATGTCAACTCCTCCTCCTCCTGTTTTCATGGACGGCGTTGTACTGCCTTGGTTGCGGTGGGAGACTAGTAATGACGGTACTCCTATGGGGTGCAGGAATAAGACTGCACCACCAGTGACCCCGAAGTCTTTTTCATGGGGTACTTCTCAGGAAGTGACCAATGCACTAGACCATAGTCAGTCTGCTAGCAGCCGCGGGAGTTGGAGCCCTGGAATAATCGATTCGCTGCCATTTAACGTCATGGAAAATTCATCCAGTAAAATTGAAGAATCTGGTAATTACCAGCGCCAACCACACCCGGGCGGGTCAAATCCTTCACGCTTTGACATGGAAAAGTATCTCCAGCTTAAAAACAATGAAGATTTTCTCTTAGAAACACTGAAGCAACAGCGCAGAATTGGTTCTGGGGGCCTGTTGCTTTGTAATAGAATGTTGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

579

Amino Acids

64.08

Weight (kDa)

9.43

Isoelectric Point (pI)

70.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50350
fragaria_vesca	FvH4_5g07650
malus_domestica	MD06G1148700.v1.1 MD14G1162500.v1.1 MD14G1162600.v1.1
prunus_persica	Prupe.5G155700_v2.0.a1 Prupe.5G155700_v2.0.a1
pyrus_communis	pycom06g13810 pycom14g13540
rosa_chinensis	RchiOBHm_Chr1g0380401 RchiOBHm_Chr7g0190821
rosa_laevigata	RLG00000004491 RLG00000026306
rosa_multiflora	Rmu_sc0002819.1_g000002 Rmu_sc0005371.1_g000003
rosa_roxburghii	Rroxscaffold_3G00264270 Rroxscaffold_4G00279420
rosa_rugosa	Rorug01G0420500 Rorug01G0420600 Rorug01G0420700 Rorug06G0507400
rosa_samantha	Rh1AG444900 Rh1BG400000 Rh1CG414700 Rh1DG430000 Rh5AG542600 Rh7AG114000 Rh7BG116600 Rh7CG119300 Rh7DG117800
rosa_wichuraiana	Rw1G038720 Rw7G009950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	571, 1423
AccBSI	CCGCTC	1 cut(s)	363
AccII	CGCG	2 cut(s)	106, 1494
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	3 cut(s)	155, 439, 1546
AcuI	CTGAAG	2 cut(s)	917, 1700
AcyI	GRCGYC	2 cut(s)	38, 566
AdeI	CACNNNGTG	1 cut(s)	899
AfaI	GTAC	4 cut(s)	930, 1341, 1378, 1441
AfiI	CCNNNNNNNGG	5 cut(s)	87, 136, 324, 325, 1598
AgsI	TTSAA	9 cut(s)	19, 161, 594, 640, 857, 948, 1197, 1205, 1565
AhdI	GACNNNNNGTC	1 cut(s)	1105
AhlI	ACTAGT	1 cut(s)	1364
AjnI	CCWGG	4 cut(s)	176, 604, 895, 1507
AluBI	AGCT	7 cut(s)	51, 117, 250, 402, 740, 1257, 1645
AluI	AGCT	7 cut(s)	51, 117, 250, 402, 740, 1257, 1645
Alw21I	GWGCWC	2 cut(s)	53, 768
Alw26I	GTCTC	3 cut(s)	96, 371, 1355
Ama87I	CYCGRG	3 cut(s)	208, 352, 1597
AoxI	GGCC	5 cut(s)	147, 349, 385, 602, 1708
ApeKI	GCWGC	4 cut(s)	117, 133, 1488, 1525
ApoI	RAATTY	3 cut(s)	155, 439, 1546
Asp700I	GAANNNNTTC	4 cut(s)	542, 1284, 1662, 1699
AspLEI	GCGC	3 cut(s)	102, 1587, 1692
AspS9I	GGNCC	3 cut(s)	350, 385, 1708
AsuC2I	CCSGG	3 cut(s)	218, 1598, 1599
AsuHPI	GGTGA	5 cut(s)	86, 370, 386, 911, 1244
AsuNHI	GCTAGC	1 cut(s)	1484
AvaI	CYCGRG	3 cut(s)	208, 352, 1597
BanII	GRGCYC	3 cut(s)	53, 209, 1508
BbsI	GAAGAC	3 cut(s)	660, 734, 1212
Bbv12I	GWGCWC	2 cut(s)	53, 768
BbvCI	CCTCAGC	1 cut(s)	113
BbvI	GCAGC	4 cut(s)	104, 120, 1500, 1512
BccI	CCATC	2 cut(s)	644, 1223
BceAI	ACGGC	3 cut(s)	364, 372, 1348
BciT130I	CCWGG	4 cut(s)	178, 606, 897, 1509
BcnI	CCSGG	3 cut(s)	218, 1598, 1599
BcoDI	GTCTC	3 cut(s)	96, 371, 1355
BcuI	ACTAGT	1 cut(s)	1364
BfaI	CTAG	7 cut(s)	549, 660, 890, 1116, 1365, 1466, 1485
BfoI	RGCGCY	2 cut(s)	103, 1588
BisI	GCNGC	8 cut(s)	118, 134, 143, 364, 367, 1489, 1492, 1526
BlsI	GCNGC	8 cut(s)	119, 135, 144, 365, 368, 1490, 1493, 1527
Bme1390I	CCNGG	7 cut(s)	178, 218, 606, 897, 1509, 1598, 1599
BmeRI	GACNNNNNGTC	1 cut(s)	1105
BmeT110I	CYCGRG	3 cut(s)	208, 352, 1597
BmgT120I	GGNCC	3 cut(s)	350, 385, 1708
BmiI	GGNNCC	5 cut(s)	141, 215, 386, 1505, 1709
BmrFI	CCNGG	7 cut(s)	178, 218, 606, 897, 1509, 1598, 1599
BmsI	GCATC	1 cut(s)	688
BmtI	GCTAGC	1 cut(s)	1488
BoxI	GACNNNNGTC	1 cut(s)	1473
BpiI	GAAGAC	3 cut(s)	660, 734, 1212
BpmI	CTGGAG	2 cut(s)	1043, 1625
Bpu10I	CCTNAGC	4 cut(s)	113, 403, 1074, 1258
BpuMI	CCSGG	3 cut(s)	218, 1598, 1599
Bsa29I	ATCGAT	1 cut(s)	1518
BsaBI	GATNNNNATC	1 cut(s)	504
BsaHI	GRCGYC	2 cut(s)	38, 566
BsaI	GGTCTC	1 cut(s)	96
BsaJI	CCNNGG	8 cut(s)	9, 150, 176, 353, 1346, 1492, 1507, 1597
BsaXI	ACNNNNNCTCC	4 cut(s)	402, 432, 1297, 1327
Bsc4I	CCNNNNNNNGG	5 cut(s)	87, 136, 324, 325, 1598
Bse118I	RCCGGY	3 cut(s)	96, 129, 145
Bse1I	ACTGG	3 cut(s)	664, 1412, 1554
Bse3DI	GCAATG	1 cut(s)	1135
Bse8I	GATNNNNATC	1 cut(s)	504
BseBI	CCWGG	4 cut(s)	178, 606, 897, 1509
BseCI	ATCGAT	1 cut(s)	1518
BseDI	CCNNGG	8 cut(s)	9, 150, 176, 353, 1346, 1492, 1507, 1597
BseGI	GGATG	3 cut(s)	274, 703, 1550
BseJI	GATNNNNATC	1 cut(s)	504
BseLI	CCNNNNNNNGG	5 cut(s)	87, 136, 324, 325, 1598
BseMI	GCAATG	1 cut(s)	1135
BseMII	CTCAG	6 cut(s)	127, 417, 714, 1065, 1152, 1460
BseNI	ACTGG	3 cut(s)	664, 1412, 1554
BseRI	GAGGAG	6 cut(s)	291, 310, 1138, 1299, 1302, 1305
BseX3I	CGGCCG	1 cut(s)	147
BseXI	GCAGC	4 cut(s)	104, 120, 1500, 1512
BsgI	GTGCAG	2 cut(s)	1389, 1411
Bsh1236I	CGCG	2 cut(s)	106, 1494
Bsh1285I	CGRYCG	3 cut(s)	45, 150, 458
BshFI	GGCC	5 cut(s)	149, 351, 387, 604, 1710
BshVI	ATCGAT	1 cut(s)	1518
BsiEI	CGRYCG	3 cut(s)	45, 150, 458
BsiHKAI	GWGCWC	2 cut(s)	53, 768
BsiHKCI	CYCGRG	3 cut(s)	208, 352, 1597
BsiSI	CCGG	7 cut(s)	62, 97, 130, 137, 146, 218, 1598
BslFI	GGGAC	1 cut(s)	559
BslI	CCNNNNNNNGG	5 cut(s)	87, 136, 324, 325, 1598
BsmAI	GTCTC	3 cut(s)	96, 371, 1355
BsmBI	CGTCTC	1 cut(s)	371
BsmFI	GGGAC	1 cut(s)	559
BsnI	GGCC	5 cut(s)	149, 351, 387, 604, 1710
Bso31I	GGTCTC	1 cut(s)	96
BsoBI	CYCGRG	3 cut(s)	208, 352, 1597
Bsp1286I	GDGCHC	4 cut(s)	53, 209, 768, 1508
Bsp143I	GATC	5 cut(s)	42, 455, 499, 505, 911
BspANI	GGCC	5 cut(s)	149, 351, 387, 604, 1710
BspCNI	CTCAG	6 cut(s)	126, 416, 715, 1066, 1153, 1459
BspDI	ATCGAT	1 cut(s)	1518
BspFNI	CGCG	2 cut(s)	106, 1494
BspLI	GGNNCC	5 cut(s)	141, 215, 386, 1505, 1709
BspOI	GCTAGC	1 cut(s)	1488
BspQI	GCTCTTC	1 cut(s)	58
BspTNI	GGTCTC	1 cut(s)	96
BsrBI	CCGCTC	1 cut(s)	363
BsrDI	GCAATG	1 cut(s)	1135
BsrFI	RCCGGY	3 cut(s)	96, 129, 145
BsrI	ACTGG	3 cut(s)	664, 1412, 1554
BssAI	RCCGGY	3 cut(s)	96, 129, 145
BssECI	CCNNGG	8 cut(s)	9, 150, 176, 353, 1346, 1492, 1507, 1597
BssMI	GATC	5 cut(s)	42, 455, 499, 505, 911
BssNI	GRCGYC	2 cut(s)	38, 566
BssT1I	CCWWGG	1 cut(s)	1346
Bst2UI	CCWGG	4 cut(s)	178, 606, 897, 1509
Bst4CI	ACNGT	7 cut(s)	199, 886, 920, 981, 1047, 1107, 1376
Bst6I	CTCTTC	2 cut(s)	58, 831
BstACI	GRCGYC	2 cut(s)	38, 566
BstC8I	GCNNGC	4 cut(s)	104, 131, 147, 1486
BstDSI	CCRYGG	1 cut(s)	1492
BstF5I	GGATG	3 cut(s)	274, 703, 1550
BstFNI	CGCG	2 cut(s)	106, 1494
BstH2I	RGCGCY	2 cut(s)	103, 1588
BstHHI	GCGC	3 cut(s)	102, 1587, 1692
BstKTI	GATC	5 cut(s)	45, 458, 502, 508, 914
BstMAI	GTCTC	3 cut(s)	96, 371, 1355
BstMBI	GATC	5 cut(s)	42, 455, 499, 505, 911
BstMCI	CGRYCG	3 cut(s)	45, 150, 458
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 108, 117, 126, 139, 142, 558, 1075, 1351
BstNI	CCWGG	4 cut(s)	178, 606, 897, 1509
BstNSI	RCATGY	1 cut(s)	830
BstPAI	GACNNNNGTC	1 cut(s)	1473
BstSCI	CCNGG	7 cut(s)	176, 216, 604, 895, 1507, 1596, 1597
BstUI	CGCG	2 cut(s)	106, 1494
BstV1I	GCAGC	4 cut(s)	104, 120, 1500, 1512
BstV2I	GAAGAC	3 cut(s)	660, 734, 1212
BstZI	CGGCCG	1 cut(s)	147
Bsu15I	ATCGAT	1 cut(s)	1518
BsuRI	GGCC	5 cut(s)	149, 351, 387, 604, 1710
BsuTUI	ATCGAT	1 cut(s)	1518
BtgI	CCRYGG	1 cut(s)	1492
BtsCI	GGATG	3 cut(s)	274, 703, 1550
BtsI	GCAGTG	1 cut(s)	525
BtsIMutI	CAGTG	3 cut(s)	525, 1419, 1676
Cac8I	GCNNGC	4 cut(s)	104, 131, 147, 1486
CfoI	GCGC	3 cut(s)	102, 1587, 1692
Cfr10I	RCCGGY	3 cut(s)	96, 129, 145
Cfr13I	GGNCC	3 cut(s)	350, 385, 1708
Cfr42I	CCGCGG	1 cut(s)	1495
Cfr9I	CCCGGG	1 cut(s)	1597
ClaI	ATCGAT	1 cut(s)	1518
CseI	GACGC	3 cut(s)	46, 291, 574
CsiI	ACCWGGT	1 cut(s)	895
Csp6I	GTAC	4 cut(s)	929, 1340, 1377, 1440
CviAII	CATG	8 cut(s)	647, 827, 860, 1300, 1327, 1434, 1540, 1627
CviQI	GTAC	4 cut(s)	929, 1340, 1377, 1440
DpnI	GATC	5 cut(s)	44, 457, 501, 507, 913
DpnII	GATC	5 cut(s)	42, 455, 499, 505, 911
DraIII	CACNNNGTG	1 cut(s)	899
DrdI	GACNNNNNNGTC	2 cut(s)	571, 1423
DriI	GACNNNNNGTC	1 cut(s)	1105
DseDI	GACNNNNNNGTC	2 cut(s)	571, 1423
EaeI	YGGCCR	1 cut(s)	147
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	2 cut(s)	58, 831
Eam1105I	GACNNNNNGTC	1 cut(s)	1105
EarI	CTCTTC	2 cut(s)	58, 831
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	51
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	1 cut(s)	1346
Eco24I	GRGCYC	3 cut(s)	53, 209, 1508
Eco31I	GGTCTC	1 cut(s)	96
Eco52I	CGGCCG	1 cut(s)	147
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	2 cut(s)	917, 1700
Eco88I	CYCGRG	3 cut(s)	208, 352, 1597
EcoICRI	GAGCTC	1 cut(s)	51
EcoO109I	RGGNCCY	1 cut(s)	1708
EcoRII	CCWGG	4 cut(s)	176, 604, 895, 1507
EcoT14I	CCWWGG	1 cut(s)	1346
EcoT38I	GRGCYC	3 cut(s)	53, 209, 1508
ErhI	CCWWGG	1 cut(s)	1346
Esp3I	CGTCTC	1 cut(s)	371
FaeI	CATG	8 cut(s)	650, 830, 863, 1303, 1330, 1437, 1543, 1630
FaqI	GGGAC	1 cut(s)	559
FatI	CATG	8 cut(s)	646, 826, 859, 1299, 1326, 1433, 1539, 1626
FauI	CCCGC	3 cut(s)	318, 1487, 1595
Fnu4HI	GCNGC	8 cut(s)	118, 134, 143, 364, 367, 1489, 1492, 1526
FokI	GGATG	3 cut(s)	281, 710, 1537
FriOI	GRGCYC	3 cut(s)	53, 209, 1508
Fsp4HI	GCNGC	8 cut(s)	118, 134, 143, 364, 367, 1489, 1492, 1526
FspBI	CTAG	7 cut(s)	549, 660, 890, 1116, 1365, 1466, 1485
GlaI	GCGC	3 cut(s)	101, 1586, 1691
GluI	GCNGC	8 cut(s)	118, 134, 143, 364, 367, 1489, 1492, 1526
GsuI	CTGGAG	2 cut(s)	1043, 1625
HaeII	RGCGCY	2 cut(s)	103, 1588
HaeIII	GGCC	5 cut(s)	149, 351, 387, 604, 1710
HapII	CCGG	7 cut(s)	62, 97, 130, 137, 146, 218, 1598
HgaI	GACGC	3 cut(s)	46, 291, 574
HhaI	GCGC	3 cut(s)	102, 1587, 1692
Hin1I	GRCGYC	2 cut(s)	38, 566
Hin1II	CATG	8 cut(s)	650, 830, 863, 1303, 1330, 1437, 1543, 1630
Hin6I	GCGC	3 cut(s)	100, 1585, 1690
HinP1I	GCGC	3 cut(s)	100, 1585, 1690
HincII	GTYRAC	1 cut(s)	1305
HindII	GTYRAC	1 cut(s)	1305
HinfI	GANTC	9 cut(s)	71, 172, 257, 488, 590, 902, 1291, 1520, 1568
HpaII	CCGG	7 cut(s)	62, 97, 130, 137, 146, 218, 1598
HphI	GGTGA	5 cut(s)	86, 370, 386, 911, 1244
Hpy166II	GTNNAC	4 cut(s)	193, 794, 995, 1305
Hpy188III	TCNNGA	7 cut(s)	46, 230, 503, 952, 1097, 1110, 1448
Hpy8I	GTNNAC	4 cut(s)	193, 794, 995, 1305
Hpy99I	CGWCG	2 cut(s)	28, 31
HpyAV	CCTTC	6 cut(s)	609, 688, 751, 1113, 1267, 1623
HpyCH4III	ACNGT	7 cut(s)	199, 886, 920, 981, 1047, 1107, 1376
HpyCH4IV	ACGT	1 cut(s)	1536
HpyCH4V	TGCA	3 cut(s)	1392, 1406, 1463
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 108, 117, 126, 139, 142, 558, 1075, 1351
HpySE526I	ACGT	1 cut(s)	1536
Hsp92I	GRCGYC	2 cut(s)	38, 566
Hsp92II	CATG	8 cut(s)	650, 830, 863, 1303, 1330, 1437, 1543, 1630
HspAI	GCGC	3 cut(s)	100, 1585, 1690
KroI	GCCGGC	2 cut(s)	129, 145
KroNI	GCCGGC	2 cut(s)	131, 147
KspI	CCGCGG	1 cut(s)	1495
Kzo9I	GATC	5 cut(s)	42, 455, 499, 505, 911
LguI	GCTCTTC	1 cut(s)	58
LmnI	GCTCC	6 cut(s)	48, 64, 139, 1074, 1125, 1503
Lsp1109I	GCAGC	4 cut(s)	104, 120, 1500, 1512
LweI	GCATC	1 cut(s)	688
MabI	ACCWGGT	1 cut(s)	895
MaeI	CTAG	7 cut(s)	549, 660, 890, 1116, 1365, 1466, 1485
MaeII	ACGT	1 cut(s)	1536
MaeIII	GTNAC	6 cut(s)	554, 618, 653, 1107, 1414, 1453
MalI	GATC	5 cut(s)	44, 457, 501, 507, 913
MbiI	CCGCTC	1 cut(s)	363
MboI	GATC	5 cut(s)	42, 455, 499, 505, 911
MhlI	GDGCHC	4 cut(s)	53, 209, 768, 1508
MlyI	GAGTC	3 cut(s)	65, 166, 1300
MmeI	TCCRAC	3 cut(s)	194, 954, 1481
MroNI	GCCGGC	2 cut(s)	129, 145
MroXI	GAANNNNTTC	4 cut(s)	542, 1284, 1662, 1699
MseI	TTAA	3 cut(s)	84, 1533, 1647
MspA1I	CMGCKG	2 cut(s)	117, 1494
MspI	CCGG	7 cut(s)	62, 97, 130, 137, 146, 218, 1598
MspR9I	CCNGG	7 cut(s)	178, 218, 606, 897, 1509, 1598, 1599
MvaI	CCWGG	4 cut(s)	178, 606, 897, 1509
MvnI	CGCG	2 cut(s)	106, 1494
MwoI	GCNNNNNNNGC	9 cut(s)	11, 108, 117, 126, 139, 142, 558, 1075, 1351
NaeI	GCCGGC	2 cut(s)	131, 147
NciI	CCSGG	3 cut(s)	218, 1598, 1599
NdeII	GATC	5 cut(s)	42, 455, 499, 505, 911
NgoMIV	GCCGGC	2 cut(s)	129, 145
NheI	GCTAGC	1 cut(s)	1484
NlaIII	CATG	8 cut(s)	650, 830, 863, 1303, 1330, 1437, 1543, 1630
NlaIV	GGNNCC	5 cut(s)	141, 215, 386, 1505, 1709
NmeAIII	GCCGAG	3 cut(s)	53, 175, 266
NmuCI	GTSAC	4 cut(s)	618, 1107, 1414, 1453
NspI	RCATGY	1 cut(s)	830
PciSI	GCTCTTC	1 cut(s)	58
PdiI	GCCGGC	2 cut(s)	131, 147
PdmI	GAANNNNTTC	4 cut(s)	542, 1284, 1662, 1699
PfeI	GAWTC	6 cut(s)	257, 488, 590, 902, 1520, 1568
PfoI	TCCNGGA	1 cut(s)	216
PkrI	GCNGC	8 cut(s)	119, 135, 144, 365, 368, 1490, 1493, 1527
Ple19I	CGATCG	2 cut(s)	45, 458
PleI	GAGTC	3 cut(s)	65, 166, 1299
PpsI	GAGTC	3 cut(s)	65, 166, 1299
PshAI	GACNNNNGTC	1 cut(s)	1473
Psp124BI	GAGCTC	1 cut(s)	53
Psp6I	CCWGG	4 cut(s)	176, 604, 895, 1507
PspGI	CCWGG	4 cut(s)	176, 604, 895, 1507
PspN4I	GGNNCC	5 cut(s)	141, 215, 386, 1505, 1709
PspPI	GGNCC	3 cut(s)	350, 385, 1708
PvuI	CGATCG	2 cut(s)	45, 458
PvuII	CAGCTG	1 cut(s)	117
RsaI	GTAC	4 cut(s)	930, 1341, 1378, 1441
RsaNI	GTAC	4 cut(s)	929, 1340, 1377, 1440
SacI	GAGCTC	1 cut(s)	53
SacII	CCGCGG	1 cut(s)	1495
SapI	GCTCTTC	1 cut(s)	58
SaqAI	TTAA	3 cut(s)	84, 1533, 1647
SatI	GCNGC	8 cut(s)	118, 134, 143, 364, 367, 1489, 1492, 1526
Sau3AI	GATC	5 cut(s)	42, 455, 499, 505, 911
Sau96I	GGNCC	3 cut(s)	350, 385, 1708
SchI	GAGTC	3 cut(s)	65, 166, 1300
ScrFI	CCNGG	7 cut(s)	178, 218, 606, 897, 1509, 1598, 1599
SduI	GDGCHC	4 cut(s)	53, 209, 768, 1508
SexAI	ACCWGGT	1 cut(s)	895
SfaNI	GCATC	1 cut(s)	688
Sfr303I	CCGCGG	1 cut(s)	1495
SgrAI	CRCCGGYG	1 cut(s)	96
SgrBI	CCGCGG	1 cut(s)	1495
SmaI	CCCGGG	1 cut(s)	1599
SpeI	ACTAGT	1 cut(s)	1364
SspMI	CTAG	7 cut(s)	549, 660, 890, 1116, 1365, 1466, 1485
SstI	GAGCTC	1 cut(s)	53
StyD4I	CCNGG	7 cut(s)	176, 216, 604, 895, 1507, 1596, 1597
StyI	CCWWGG	1 cut(s)	1346
TaaI	ACNGT	7 cut(s)	199, 886, 920, 981, 1047, 1107, 1376
TaiI	ACGT	1 cut(s)	1539
TaqI	TCGA	6 cut(s)	23, 341, 504, 536, 1253, 1518
TaqII	GACCGA	1 cut(s)	78
TatI	WGTACW	2 cut(s)	928, 1339
TauI	GCSGC	4 cut(s)	145, 366, 369, 1494
TfiI	GAWTC	6 cut(s)	257, 488, 590, 902, 1520, 1568
Tru1I	TTAA	3 cut(s)	84, 1533, 1647
Tru9I	TTAA	3 cut(s)	84, 1533, 1647
TscAI	CASTG	3 cut(s)	532, 1419, 1683
TseFI	GTSAC	4 cut(s)	618, 1107, 1414, 1453
TseI	GCWGC	4 cut(s)	117, 133, 1488, 1525
Tsp45I	GTSAC	4 cut(s)	618, 1107, 1414, 1453
TspDTI	ATGAA	9 cut(s)	800, 816, 876, 1180, 1286, 1315, 1422, 1539, 1671
TspGWI	ACGGA	1 cut(s)	70
TspMI	CCCGGG	1 cut(s)	1597
TspRI	CASTG	3 cut(s)	532, 1419, 1683
XapI	RAATTY	3 cut(s)	155, 439, 1546
XceI	RCATGY	1 cut(s)	830
XmaI	CCCGGG	1 cut(s)	1597
XmnI	GAANNNNTTC	4 cut(s)	542, 1284, 1662, 1699
XspI	CTAG	7 cut(s)	549, 660, 890, 1116, 1365, 1466, 1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.