Rorug01G0420500

Transmembrane amino acid transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0004481
Physical Location & Seq
Forward (+)
52189916 .. 52193426
3511 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0420500.1

Sequence Viewer

Length: 2037 bp
ATGAAGAAGTACTTGGAGAACAAGCATCAAGAACAAAGAGCACAAAGCCTTTGTTTGGCAACACATGCTTCTGCTTCTCAAGAGACCATCGACAACATCCATGTGGGTTCATTCTATGAACTAGACCATTCGAAGCTTCCTGCTACTGCCTCAGAAGAGATGGAGTCGATTCGGGTCGTCATGGTGAATGGAAAGTCTCTGTTCAAGGTTTCAGTGAGGTTTCCAAGCCTTCACTCTCTCCAAACCCATCTGAATGAGGAAAGCTACCAAAACCCAGACGGCTTCCTTCCTGCTTTCGACGAAAACTACTCTATGGCTCCACAAATCGCGTCGGAGGTGCTTTACCGGAGAATCCCACATCACGAAATAGCAGAGCAGAGCATGATGTGGAGCTTTTGGGCCGGACGGTGTCGTTTCGCTACCCGGAAAAGCCCATCTCCGTGTTGCTTGTCGGAGATTAAGCTCGGCGGGATGGTCCAATGGGTTAAGCGCAAACTAGTCCGGTGCGTTACGAGGCATGAGAGTCTGTCGAGCTCTGACCAAGAACAACCAGAGAAGGAAGAAATGGAGATGGATGAAGATGTGAAAGAGCCTCGTTATGAGTTTAGGAAGAGAAAACTGGTTCAAAAGAAGACCAAAGCAGCGAAGCGTCGGAAGCAGAACAATCAAATAGTGGTTCATGACCGGACCCAGAATCAATTGGTTGAAGCCTCAATAGAGAGATGGACTGCAAGGAGGTACAAGGCAGCAGAGGAGAGCATACTTAAGGTGATGAAGGCAAAAGGTGTTTGTGCTGAGAATCCAATACGGAGAGGACCACTGAGGTGTGAGGCCCGTAAGTTGATTGGGGACACTGGTTTGATAGACCATTTGTTGAAGCATATGGCTGGGAAGGTAGCTCCGGGTGGCACTGATCGGTTTCGGAGAAGGCATAATGCTGATGGAGCACTTGTGTATTGGCTGGAGAGTGCTGATTTAATGAGTGTAAGGAAGGAGGCTGGGGTTGAGGATCCTTATTGGACTCCACCCCCGGGGTGGAAGATTGGGGATAACCCAACTCAGGACCCTACTTGTGTGAGGATGTTCAAGGAGATTTGGGAAGAGATAGCCAATGTGAAAAGAGAGAGGGAATTTCAGCAGCAAGAGGATATAGCTATGGTGACCACCGTAAACTCTTCGCTGACAACTCTGGATCAGGGCCAAGCTTACAGTTCAGTAACCTATCAAAAGGAGTCAGAGGACAAATACACAGAGCTAGCTGTTAGGAAGTCTAAAATTGAAGAACAAATGCTGCAACTTTCTCAATCTTTCTCTGGAATTGAGGAAGAAATGAACTCATTGCTAGAAGAAATGAGGGTGCTGAAACCAACCATGGAAGAATCAGCATTTGTCTACTCAGAAACAGCTGAAGTACCAATGCTGATATCGGACATAGAAGGAGGGACAAAAGATAAGATGGGATCAAGAGACAAGGCTAGTATAGAGGACAAGGCAGCAAAGATAGAGAGGCTGCGCAGTAGCTTCAGGATTTGCAAGCCACAAGGAACATTTCTGTGGCCAGACATGAGCGTGTCTCCAAAGGGTGTGGTTCAGCAAACCGACTCTTTTTTGGTCCCCACTCCACCCTCAGTTTCCTCTTATAACAAGTCAGCAACCCGCCTATTCCTTCATACACCAAATGAGCACAACCCGGGCTCCCCTCTGAAGCCATTGGCTGAGAGACGTGCAGTCAACATAAGCACTTTGAGCAATGTGACCAAGCCACCTGAGAAGACAAACCCCCAGTCCCAGATTGACTCTATCAGCATTGGCAAAACCCTTAACATCAACCTCAATGAGTTCCCTGATGCCTACAACACTGACTCTACTGCAATTCCCGAGGCTCTCACTTACCAGAGAAAGCATCAAAATATGGTGAAGGCCAAAATGACCATGGAGCATGACACAGATCCAGGGAAGGATATTATGGGATTGTTAAGGTACAACTCTAAGCATCAGCAAAGGTGGTGTTCTTCTTCTTTCACTAGTAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

678

Amino Acids

77.33

Weight (kDa)

8.32

Isoelectric Point (pI)

55.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_plant_repro PF25874 241 - 323 9.7e-24 Winged helix-turn-helix domain in plant reproductive proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1641
Acc16I TGCGCA 1 cut(s) 1514
AccI GTMKAC 1 cut(s) 1392
AccII CGCG 1 cut(s) 329
AciI CCGC 2 cut(s) 468, 1657
AclWI GGATC 5 cut(s) 1004, 1017, 1200, 1468, 1943
AcoI YGGCCR 1 cut(s) 1556
AcsI RAATTY 1 cut(s) 1130
AcuI CTGAAG 3 cut(s) 1428, 1507, 1724
AfaI GTAC 4 cut(s) 11, 740, 1413, 1982
AfiI CCNNNNNNNGG 4 cut(s) 55, 1031, 1035, 1060
AflII CTTAAG 1 cut(s) 764
AgsI TTSAA 6 cut(s) 205, 626, 707, 877, 1087, 1280
AhdI GACNNNNNGTC 1 cut(s) 1727
AhlI ACTAGT 2 cut(s) 496, 2024
AjiI CACGTC 1 cut(s) 1724
AjnI CCWGG 1 cut(s) 1951
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AleI CACNNNNGTG 1 cut(s) 823
Alw21I GWGCWC 4 cut(s) 43, 536, 949, 1686
Alw26I GTCTC 5 cut(s) 77, 201, 1461, 1578, 1714
AlwI GGATC 5 cut(s) 1004, 1017, 1200, 1468, 1943
Ama87I CYCGRG 3 cut(s) 1030, 1690, 1877
AoxI GGCC 5 cut(s) 399, 831, 1198, 1556, 1920
ApeKI GCWGC 6 cut(s) 641, 746, 1138, 1291, 1493, 1510
ApoI RAATTY 1 cut(s) 1130
ArsI GACNNNNNNTTYG 2 cut(s) 1769, 1801
AspLEI GCGC 2 cut(s) 492, 1515
AspS9I GGNCC 8 cut(s) 399, 475, 687, 815, 832, 1063, 1198, 1612
AsuC2I CCSGG 6 cut(s) 424, 903, 1031, 1032, 1691, 1692
AsuHPI GGTGA 4 cut(s) 196, 781, 1171, 1927
AsuII TTCGAA 1 cut(s) 131
AsuNHI GCTAGC 1 cut(s) 1255
AvaI CYCGRG 3 cut(s) 1030, 1690, 1877
AvaII GGWCC 5 cut(s) 475, 687, 815, 1063, 1612
BalI TGGCCA 1 cut(s) 1558
BamHI GGATCC 1 cut(s) 1009
BanII GRGCYC 2 cut(s) 536, 1697
BbsI GAAGAC 2 cut(s) 638, 1778
Bbv12I GWGCWC 4 cut(s) 43, 536, 949, 1686
BbvI GCAGC 6 cut(s) 653, 758, 1150, 1278, 1497, 1505
BccI CCATC 9 cut(s) 95, 154, 255, 442, 466, 565, 717, 935, 1450
BceAI ACGGC 1 cut(s) 295
BciT130I CCWGG 1 cut(s) 1953
BcnI CCSGG 6 cut(s) 424, 903, 1031, 1032, 1691, 1692
BcoDI GTCTC 5 cut(s) 77, 201, 1461, 1578, 1714
BcuI ACTAGT 2 cut(s) 496, 2024
BfaI CTAG 6 cut(s) 122, 497, 1256, 1343, 1476, 2025
BfrI CTTAAG 1 cut(s) 764
BisI GCNGC 6 cut(s) 642, 747, 1139, 1292, 1494, 1511
BlsI GCNGC 6 cut(s) 643, 748, 1140, 1293, 1495, 1512
BmcAI AGTACT 1 cut(s) 11
Bme1390I CCNGG 7 cut(s) 424, 903, 1031, 1032, 1691, 1692, 1953
Bme18I GGWCC 5 cut(s) 475, 687, 815, 1063, 1612
BmeRI GACNNNNNGTC 1 cut(s) 1727
BmeT110I CYCGRG 3 cut(s) 1030, 1690, 1877
BmgBI CACGTC 1 cut(s) 1724
BmgT120I GGNCC 8 cut(s) 399, 475, 687, 815, 832, 1063, 1198, 1612
BmiI GGNNCC 6 cut(s) 318, 689, 1011, 1065, 1614, 1696
BmrFI CCNGG 7 cut(s) 424, 903, 1031, 1032, 1691, 1692, 1953
BmrI ACTGGG 1 cut(s) 1777
BmsI GCATC 4 cut(s) 34, 1837, 1912, 2002
BmtI GCTAGC 1 cut(s) 1259
BmuI ACTGGG 1 cut(s) 1777
BpiI GAAGAC 2 cut(s) 638, 1778
BplI GAGNNNNNCTC 2 cut(s) 1558, 1590
BpmI CTGGAG 1 cut(s) 983
Bpu14I TTCGAA 1 cut(s) 131
BpuEI CTTGAG 1 cut(s) 63
BpuMI CCSGG 6 cut(s) 424, 903, 1031, 1032, 1691, 1692
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 8 cut(s) 1029, 1030, 1031, 1371, 1690, 1878, 1932, 1952
BsaWI WCCGGW 3 cut(s) 345, 501, 684
BsaXI ACNNNNNCTCC 4 cut(s) 936, 966, 1679, 1709
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 1031, 1035, 1060
Bse1I ACTGG 3 cut(s) 624, 859, 1783
Bse3DI GCAATG 2 cut(s) 1337, 1756
BseBI CCWGG 1 cut(s) 1953
BseDI CCNNGG 8 cut(s) 1029, 1030, 1031, 1371, 1690, 1878, 1932, 1952
BseGI GGATG 4 cut(s) 96, 477, 580, 1086
BseLI CCNNNNNNNGG 4 cut(s) 55, 1031, 1035, 1060
BseMI GCAATG 2 cut(s) 1337, 1756
BseMII CTCAG 8 cut(s) 165, 786, 812, 1073, 1410, 1641, 1707, 1758
BseNI ACTGG 3 cut(s) 624, 859, 1783
BseRI GAGGAG 1 cut(s) 767
BseXI GCAGC 6 cut(s) 653, 758, 1150, 1278, 1497, 1505
BseYI CCCAGC 2 cut(s) 887, 998
BsgI GTGCAG 1 cut(s) 1746
Bsh1236I CGCG 1 cut(s) 329
BshFI GGCC 5 cut(s) 401, 833, 1200, 1558, 1922
BsiHKAI GWGCWC 4 cut(s) 43, 536, 949, 1686
BsiHKCI CYCGRG 3 cut(s) 1030, 1690, 1877
BsiSI CCGG 8 cut(s) 346, 402, 424, 502, 685, 902, 1031, 1691
BslFI GGGAC 4 cut(s) 863, 1456, 1598, 1771
BslI CCNNNNNNNGG 4 cut(s) 55, 1031, 1035, 1060
BsmAI GTCTC 5 cut(s) 77, 201, 1461, 1578, 1714
BsmBI CGTCTC 1 cut(s) 1714
BsmFI GGGAC 4 cut(s) 863, 1456, 1598, 1771
BsnI GGCC 5 cut(s) 401, 833, 1200, 1558, 1922
Bso31I GGTCTC 1 cut(s) 77
BsoBI CYCGRG 3 cut(s) 1030, 1690, 1877
Bsp119I TTCGAA 1 cut(s) 131
Bsp1286I GDGCHC 5 cut(s) 43, 536, 949, 1686, 1697
Bsp143I GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
Bsp19I CCATGG 2 cut(s) 1371, 1932
BspACI CCGC 2 cut(s) 468, 1657
BspANI GGCC 5 cut(s) 401, 833, 1200, 1558, 1922
BspCNI CTCAG 8 cut(s) 164, 787, 813, 1072, 1409, 1640, 1708, 1759
BspFNI CGCG 1 cut(s) 329
BspHI TCATGA 1 cut(s) 679
BspLI GGNNCC 6 cut(s) 318, 689, 1011, 1065, 1614, 1696
BspOI GCTAGC 1 cut(s) 1259
BspPI GGATC 5 cut(s) 1004, 1017, 1200, 1468, 1943
BspT104I TTCGAA 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 764
BspTNI GGTCTC 1 cut(s) 77
BsrDI GCAATG 2 cut(s) 1337, 1756
BsrI ACTGG 3 cut(s) 624, 859, 1783
BssECI CCNNGG 8 cut(s) 1029, 1030, 1031, 1371, 1690, 1878, 1932, 1952
BssMI GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
BssT1I CCWWGG 2 cut(s) 1371, 1932
Bst2UI CCWGG 1 cut(s) 1953
Bst4CI ACNGT 3 cut(s) 408, 1168, 1211
Bst6I CTCTTC 4 cut(s) 150, 605, 1095, 1180
BstAFI CTTAAG 1 cut(s) 764
BstAPI GCANNNNNTGC 1 cut(s) 65
BstBI TTCGAA 1 cut(s) 131
BstC8I GCNNGC 2 cut(s) 1257, 1535
BstDEI CTNAG 9 cut(s) 151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
BstDSI CCRYGG 2 cut(s) 1371, 1932
BstEII GGTNACC 1 cut(s) 1159
BstF5I GGATG 4 cut(s) 96, 477, 580, 1086
BstFNI CGCG 1 cut(s) 329
BstHHI GCGC 2 cut(s) 492, 1515
BstKTI GATC 5 cut(s) 916, 1012, 1195, 1463, 1951
BstMAI GTCTC 5 cut(s) 77, 201, 1461, 1578, 1714
BstMBI GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
BstMWI GCNNNNNNNGC 4 cut(s) 65, 655, 944, 1746
BstNI CCWGG 1 cut(s) 1953
BstNSI RCATGY 1 cut(s) 68
BstPI GGTNACC 1 cut(s) 1159
BstSCI CCNGG 7 cut(s) 422, 901, 1029, 1030, 1689, 1690, 1951
BstUI CGCG 1 cut(s) 329
BstV1I GCAGC 6 cut(s) 653, 758, 1150, 1278, 1497, 1505
BstV2I GAAGAC 2 cut(s) 638, 1778
BstX2I RGATCY 2 cut(s) 1009, 1948
BstYI RGATCY 2 cut(s) 1009, 1948
BsuRI GGCC 5 cut(s) 401, 833, 1200, 1558, 1922
BtgI CCRYGG 2 cut(s) 1371, 1932
BtrI CACGTC 1 cut(s) 1724
BtsCI GGATG 4 cut(s) 96, 477, 580, 1086
BtsIMutI CAGTG 5 cut(s) 219, 818, 852, 909, 1857
Cac8I GCNNGC 2 cut(s) 1257, 1535
CciI TCATGA 1 cut(s) 679
CfoI GCGC 2 cut(s) 492, 1515
Cfr13I GGNCC 8 cut(s) 399, 475, 687, 815, 832, 1063, 1198, 1612
Cfr9I CCCGGG 2 cut(s) 1030, 1690
CseI GACGC 2 cut(s) 318, 638
Csp6I GTAC 4 cut(s) 10, 739, 1412, 1981
CspCI CAANNNNNGTGG 2 cut(s) 1566, 1601
CviQI GTAC 4 cut(s) 10, 739, 1412, 1981
DdeI CTNAG 9 cut(s) 151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
DpnI GATC 5 cut(s) 915, 1011, 1194, 1462, 1950
DpnII GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
DriI GACNNNNNGTC 1 cut(s) 1727
EaeI YGGCCR 1 cut(s) 1556
Eam1104I CTCTTC 4 cut(s) 150, 605, 1095, 1180
Eam1105I GACNNNNNGTC 1 cut(s) 1727
EarI CTCTTC 4 cut(s) 150, 605, 1095, 1180
Ecl136II GAGCTC 1 cut(s) 534
Eco130I CCWWGG 2 cut(s) 1371, 1932
Eco24I GRGCYC 2 cut(s) 536, 1697
Eco31I GGTCTC 1 cut(s) 77
Eco32I GATATC 1 cut(s) 1425
Eco47I GGWCC 5 cut(s) 475, 687, 815, 1063, 1612
Eco53kI GAGCTC 1 cut(s) 534
Eco57I CTGAAG 3 cut(s) 1428, 1507, 1724
Eco88I CYCGRG 3 cut(s) 1030, 1690, 1877
Eco91I GGTNACC 1 cut(s) 1159
EcoICRI GAGCTC 1 cut(s) 534
EcoO109I RGGNCCY 1 cut(s) 1063
EcoO65I GGTNACC 1 cut(s) 1159
EcoRII CCWGG 1 cut(s) 1951
EcoRV GATATC 1 cut(s) 1425
EcoT14I CCWWGG 2 cut(s) 1371, 1932
EcoT38I GRGCYC 2 cut(s) 536, 1697
ErhI CCWWGG 2 cut(s) 1371, 1932
Esp3I CGTCTC 1 cut(s) 1714
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 4 cut(s) 863, 1456, 1598, 1771
FauI CCCGC 2 cut(s) 461, 1664
FauNDI CATATG 1 cut(s) 882
FblI GTMKAC 1 cut(s) 1392
Fnu4HI GCNGC 6 cut(s) 642, 747, 1139, 1292, 1494, 1511
FokI GGATG 4 cut(s) 83, 484, 587, 1093
FriOI GRGCYC 2 cut(s) 536, 1697
Fsp4HI GCNGC 6 cut(s) 642, 747, 1139, 1292, 1494, 1511
FspBI CTAG 6 cut(s) 122, 497, 1256, 1343, 1476, 2025
FspI TGCGCA 1 cut(s) 1514
GlaI GCGC 2 cut(s) 491, 1514
GluI GCNGC 6 cut(s) 642, 747, 1139, 1292, 1494, 1511
GsaI CCCAGC 2 cut(s) 891, 1002
GsuI CTGGAG 1 cut(s) 983
HaeIII GGCC 5 cut(s) 401, 833, 1200, 1558, 1922
HapII CCGG 8 cut(s) 346, 402, 424, 502, 685, 902, 1031, 1691
HgaI GACGC 2 cut(s) 318, 638
HhaI GCGC 2 cut(s) 492, 1515
Hin6I GCGC 2 cut(s) 490, 1513
HinP1I GCGC 2 cut(s) 490, 1513
HincII GTYRAC 1 cut(s) 1732
HindII GTYRAC 1 cut(s) 1732
HindIII AAGCTT 2 cut(s) 134, 1203
HpaII CCGG 8 cut(s) 346, 402, 424, 502, 685, 902, 1031, 1691
HphI GGTGA 4 cut(s) 196, 781, 1171, 1927
Hpy166II GTNNAC 3 cut(s) 1171, 1393, 1732
Hpy8I GTNNAC 3 cut(s) 1171, 1393, 1732
Hpy99I CGWCG 3 cut(s) 302, 334, 654
HpyCH4III ACNGT 3 cut(s) 408, 1168, 1211
HpyCH4IV ACGT 1 cut(s) 1723
HpyCH4V TGCA 5 cut(s) 731, 1294, 1533, 1727, 1871
HpyF10VI GCNNNNNNNGC 4 cut(s) 65, 655, 944, 1746
HpyF3I CTNAG 9 cut(s) 151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
HpySE526I ACGT 1 cut(s) 1723
HspAI GCGC 2 cut(s) 490, 1513
Kzo9I GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
LmnI GCTCC 6 cut(s) 322, 390, 904, 944, 1700, 1936
Lsp1109I GCAGC 6 cut(s) 653, 758, 1150, 1278, 1497, 1505
LweI GCATC 4 cut(s) 34, 1837, 1912, 2002
MaeI CTAG 6 cut(s) 122, 497, 1256, 1343, 1476, 2025
MaeII ACGT 1 cut(s) 1723
MaeIII GTNAC 4 cut(s) 508, 1159, 1216, 1753
MalI GATC 5 cut(s) 915, 1011, 1194, 1462, 1950
MboI GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
MfeI CAATTG 1 cut(s) 698
MflI RGATCY 2 cut(s) 1009, 1948
MhlI GDGCHC 5 cut(s) 43, 536, 949, 1686, 1697
MlsI TGGCCA 1 cut(s) 1558
MluCI AATT 5 cut(s) 698, 1130, 1275, 1317, 1872
MluNI TGGCCA 1 cut(s) 1558
MlyI GAGTC 7 cut(s) 173, 532, 1015, 1241, 1595, 1790, 1856
MmeI TCCRAC 3 cut(s) 312, 432, 632
Mox20I TGGCCA 1 cut(s) 1558
MscI TGGCCA 1 cut(s) 1558
MseI TTAA 6 cut(s) 459, 486, 765, 977, 1821, 1976
MslI CAYNNNNRTG 6 cut(s) 101, 252, 439, 823, 1552, 1568
Msp20I TGGCCA 1 cut(s) 1558
MspA1I CMGCKG 1 cut(s) 1406
MspCI CTTAAG 1 cut(s) 764
MspI CCGG 8 cut(s) 346, 402, 424, 502, 685, 902, 1031, 1691
MspR9I CCNGG 7 cut(s) 424, 903, 1031, 1032, 1691, 1692, 1953
MunI CAATTG 1 cut(s) 698
MvaI CCWGG 1 cut(s) 1953
MvnI CGCG 1 cut(s) 329
MwoI GCNNNNNNNGC 4 cut(s) 65, 655, 944, 1746
NciI CCSGG 6 cut(s) 424, 903, 1031, 1032, 1691, 1692
NcoI CCATGG 2 cut(s) 1371, 1932
NdeI CATATG 1 cut(s) 882
NdeII GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
NheI GCTAGC 1 cut(s) 1255
NlaIV GGNNCC 6 cut(s) 318, 689, 1011, 1065, 1614, 1696
NmeAIII GCCGAG 1 cut(s) 444
NmuCI GTSAC 2 cut(s) 1159, 1753
NsbI TGCGCA 1 cut(s) 1514
NspI RCATGY 1 cut(s) 68
NspV TTCGAA 1 cut(s) 131
OliI CACNNNNGTG 1 cut(s) 823
PagI TCATGA 1 cut(s) 679
PfeI GAWTC 5 cut(s) 169, 351, 694, 799, 1379
PflFI GACNNNGTC 1 cut(s) 408
PkrI GCNGC 6 cut(s) 643, 748, 1140, 1293, 1495, 1512
PleI GAGTC 7 cut(s) 172, 531, 1015, 1240, 1595, 1790, 1856
PpsI GAGTC 7 cut(s) 172, 531, 1015, 1240, 1595, 1790, 1856
PpuMI RGGWCCY 1 cut(s) 1063
PsiI TTATAA 1 cut(s) 1641
Psp124BI GAGCTC 1 cut(s) 536
Psp5II RGGWCCY 1 cut(s) 1063
Psp6I CCWGG 1 cut(s) 1951
PspEI GGTNACC 1 cut(s) 1159
PspFI CCCAGC 2 cut(s) 887, 998
PspGI CCWGG 1 cut(s) 1951
PspN4I GGNNCC 6 cut(s) 318, 689, 1011, 1065, 1614, 1696
PspPI GGNCC 8 cut(s) 399, 475, 687, 815, 832, 1063, 1198, 1612
PspPPI RGGWCCY 1 cut(s) 1063
PsuI RGATCY 2 cut(s) 1009, 1948
PsyI GACNNNGTC 1 cut(s) 408
PvuII CAGCTG 1 cut(s) 1406
RsaI GTAC 4 cut(s) 11, 740, 1413, 1982
RsaNI GTAC 4 cut(s) 10, 739, 1412, 1981
RseI CAYNNNNRTG 6 cut(s) 101, 252, 439, 823, 1552, 1568
SacI GAGCTC 1 cut(s) 536
SaqAI TTAA 6 cut(s) 459, 486, 765, 977, 1821, 1976
SatI GCNGC 6 cut(s) 642, 747, 1139, 1292, 1494, 1511
Sau3AI GATC 5 cut(s) 913, 1009, 1192, 1460, 1948
Sau96I GGNCC 8 cut(s) 399, 475, 687, 815, 832, 1063, 1198, 1612
ScaI AGTACT 1 cut(s) 11
SchI GAGTC 7 cut(s) 173, 532, 1015, 1241, 1595, 1790, 1856
ScrFI CCNGG 7 cut(s) 424, 903, 1031, 1032, 1691, 1692, 1953
SduI GDGCHC 5 cut(s) 43, 536, 949, 1686, 1697
SfaNI GCATC 4 cut(s) 34, 1837, 1912, 2002
SfuI TTCGAA 1 cut(s) 131
SinI GGWCC 5 cut(s) 475, 687, 815, 1063, 1612
SmaI CCCGGG 2 cut(s) 1032, 1692
SmiMI CAYNNNNRTG 6 cut(s) 101, 252, 439, 823, 1552, 1568
SmlI CTYRAG 2 cut(s) 78, 764
SmoI CTYRAG 2 cut(s) 78, 764
SpeI ACTAGT 2 cut(s) 496, 2024
Sse9I AATT 5 cut(s) 698, 1130, 1275, 1317, 1872
SsiI CCGC 2 cut(s) 468, 1657
SspMI CTAG 6 cut(s) 122, 497, 1256, 1343, 1476, 2025
SstI GAGCTC 1 cut(s) 536
StyD4I CCNGG 7 cut(s) 422, 901, 1029, 1030, 1689, 1690, 1951
StyI CCWWGG 2 cut(s) 1371, 1932
TaaI ACNGT 3 cut(s) 408, 1168, 1211
TaiI ACGT 1 cut(s) 1726
TaqI TCGA 5 cut(s) 90, 131, 167, 297, 530
TasI AATT 5 cut(s) 698, 1130, 1275, 1317, 1872
TatI WGTACW 1 cut(s) 9
TfiI GAWTC 5 cut(s) 169, 351, 694, 799, 1379
Tru1I TTAA 6 cut(s) 459, 486, 765, 977, 1821, 1976
Tru9I TTAA 6 cut(s) 459, 486, 765, 977, 1821, 1976
TscAI CASTG 5 cut(s) 219, 825, 859, 916, 1864
TseFI GTSAC 2 cut(s) 1159, 1753
TseI GCWGC 6 cut(s) 641, 746, 1138, 1291, 1493, 1510
Tsp45I GTSAC 2 cut(s) 1159, 1753
TspDTI ATGAA 8 cut(s) 17, 99, 132, 591, 668, 788, 1346, 1658
TspGWI ACGGA 2 cut(s) 429, 823
TspMI CCCGGG 2 cut(s) 1030, 1690
TspRI CASTG 5 cut(s) 219, 825, 859, 916, 1864
Tth111I GACNNNGTC 1 cut(s) 408
Vha464I CTTAAG 1 cut(s) 764
VpaK11BI GGWCC 5 cut(s) 475, 687, 815, 1063, 1612
XapI RAATTY 1 cut(s) 1130
XceI RCATGY 1 cut(s) 68
XcmI CCANNNNNNNNNTGG 2 cut(s) 1032, 1930
XmaI CCCGGG 2 cut(s) 1030, 1690
XmiI GTMKAC 1 cut(s) 1392
XspI CTAG 6 cut(s) 122, 497, 1256, 1343, 1476, 2025
ZrmI AGTACT 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.