Rroxscaffold_3G00272240

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
64420592 .. 64427586
6995 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00272240.1

Sequence Viewer

Length: 2049 bp
ATGAAAACTGATATCGAACTTCGACTTCTGTTGTCTCCTGAAAACCACCACTCTGCTTTGATTAATGAGACAAAGACTGACTCATCTTCTCCACCAAAACCCCAACCTCTTCTCCCCCAAAACCTCCTTCAAATCCAAAGCCAGCTCACCACCACAGGCCTACTCTCCTTAAACCCCTCGTTCCTTATACCCTTCCTAAACCTCACCCTATCAAACCCTTCAACTCTTCACCACGCCACCGCCTTGTTCACCCACACACAACACCTCAACGCGCCCACATGGCCCATCATGGTCCGCCGGCTCAACTTGGACGCCGACCCTTCTCGGGTCGTCTCTGTTTTCAAAGCCATGCAGAGGCTGAAACGTAATGGCCCTGTTCTTGATCCTTATGTATATGCTTCTTTGGTTAAAGCCTGTAACAAATTAATGGCTACCCGAGAAGGGAAAGCTGTACATTGTCATGTTGTTAGGATTGGTTTGGATTATAATGTGAATTTGTGGAATAGTATATTGAATTTGTATTCGTGTTCCGAGAGTTTGATTGGGTATGCGTGTAGGGTGTTTGATATAATGCCTCAGAGATCGGTTGTTACTGTTAATGGTATGGTATCTGGGTTTGTGAAGAATGATATGTTGGATGAGGGGGTTGGTTTGTTCAAGAAAATTTTGGATTGCTCTTTTGGTTTGGAGTTGAAGCCGAATTATGTTACTTTGGTTGTTTTGGTTTCCGGGTGTGTGGAACTGGATGGGTTTATTGTGGGAAAGGTGCTTCATTCATACTGTTGTAAGACAGGTTTGGATTTGGTGAATGAGGTTTGTAATGCAGTGATTGATTTGTACTCGAAGTTTGGGCATATAAGTGAGGCAGCAAGGATGTTTAATGAGATGCCAGAGAGGGATTTGGTTTCGTGGAATTCGATGATTGCAGGGTATGCTGGGGTTGGTCATTGTAGAAAGGCTTTGTATTTGTTTAGGGAAATGAGAGCAGACAATGTTGGATTTGATAGAGTGTCGTTGATTAGTTTGATTTCGGCTGCTGCTAATGGGCGAGATCTTGGTATGGGGAAGGTGGTTCATGGGTGTATGACAGCTACTGGAGCAGAGATCACTGTGGCTATTGGGACAGCACTGATTGATATGTATTCCAAATGTGGATCAACCAAGTGTGCTAAAAAGGTCTTGGATGAACTTCAAGATGAAAGCATTGTGCTGTGGAACTCTATGATTCATGGATATGTCGAATGTGGTCATAATCAAGAGGCATTAGAGCTCTTCAATCAAATTCAATCAAGAAAGCTAAGGCCAGATGAAATAACAATGGTAGGATTAATCCTAGCTTGCCGCAACTCAGGGGACTTGTCTCATGGTATTGGCATTCATTCTTATATAGAGAATGACATACATCTTCAAGGGAGTATTGTACTGCAGAATGCTCTTATTGATATGTACGCAAAATGCGGGAGCATGAGCCTAGCTAAAGTTGTGTTTGATAAGATGCCTAGCAAAGATGTTGTCTCATGGACTTCAATTATAGTGGGTCACGCCATCAATGGTGAAGGAAAGGAAGCGATTTTTGCTTTCAGGAAAATGTGTGCTGAGAAAGTTGAGCCGAACTCTGTTACCTTCATAGGTGTTCTATCAGCATGTGACCATGCTGGCTTGGTTGAGGAAGGTCTGAACTTGTATGATGATATGTGCAGATTGTACCATATCAAGCCCCGGATTGAGCACTGCGGATGCATCATTGATATGCTTGCGCGAGCAGGAAGGCTAGAGGAGGCTCACAAGTTTGTGAAGAGTATGCCTATAGAACTAAATGCAGTTGTGTGGAGGATGTTGGTTAATGCTTGTAGAGTTCATGGTGATTTTGCTAGAGGGTTGTGTTTGGTTAGTGGATTCACAGATCTAAACACACTGCATGGTGCTGAAGATCATGTTGCTTCATCCAACATTCTAGCTGATGCAGGAAGGTGGGATGATGTTCTTAACGAAAGGAGCTTGATGGCCACCAGGACAAATACAAAAGTTGCGGGTAAAAGCTCTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

682

Amino Acids

75.1

Weight (kDa)

6.68

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 300 - 347 7.7e-07 PPR repeat family
PPR PF01535 302 - 331 1.4e-06 PPR repeat
PPR_2 PF13041 401 - 447 1.2e-10 PPR repeat family
PPR PF01535 403 - 432 4.6e-06 PPR repeat
PPR_2 PF13041 502 - 549 2e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016340)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 486
AccII CGCG 2 cut(s) 272, 1759
AciI CCGC 6 cut(s) 240, 295, 1342, 1458, 1734, 2030
AclWI GGATC 2 cut(s) 377, 1162
AcoI YGGCCR 1 cut(s) 2004
AcsI RAATTY 5 cut(s) 493, 514, 663, 913, 1281
AcuI CTGAAG 1 cut(s) 1947
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 5 cut(s) 453, 839, 1422, 1448, 1706
AfiI CCNNNNNNNGG 3 cut(s) 325, 354, 441
AjnI CCWGG 1 cut(s) 2009
AjuI GAANNNNNNNTTGG 4 cut(s) 111, 143, 617, 649
Alw21I GWGCWC 2 cut(s) 1272, 1731
Alw26I GTCTC 5 cut(s) 39, 62, 337, 1365, 1519
AlwI GGATC 2 cut(s) 377, 1162
AlwNI CAGNNNCTG 2 cut(s) 358, 1094
Ama87I CYCGRG 2 cut(s) 324, 435
AoxI GGCC 5 cut(s) 157, 281, 370, 1301, 2004
ApeKI GCWGC 3 cut(s) 866, 1034, 1037
ApoI RAATTY 5 cut(s) 493, 514, 663, 913, 1281
ArsI GACNNNNNNTTYG 2 cut(s) 1497, 1529
AseI ATTAAT 3 cut(s) 63, 425, 1328
AspLEI GCGC 2 cut(s) 274, 1759
AspS9I GGNCC 3 cut(s) 282, 292, 371
AsuC2I CCSGG 2 cut(s) 730, 1720
AsuHPI GGTGA 7 cut(s) 139, 196, 221, 241, 817, 1565, 1874
AvaI CYCGRG 2 cut(s) 324, 435
AvaII GGWCC 1 cut(s) 292
BalI TGGCCA 1 cut(s) 2006
BanII GRGCYC 1 cut(s) 1272
Bbv12I GWGCWC 2 cut(s) 1272, 1731
BbvI GCAGC 3 cut(s) 878, 1021, 1024
BccI CCATC 4 cut(s) 293, 740, 1553, 1996
BciT130I CCWGG 1 cut(s) 2011
BcnI CCSGG 2 cut(s) 730, 1720
BcoDI GTCTC 5 cut(s) 39, 62, 337, 1365, 1519
BfaI CTAG 6 cut(s) 1334, 1472, 1500, 1772, 1872, 1955
BfmI CTRYAG 2 cut(s) 1424, 1806
BglI GCCNNNNNGGC 1 cut(s) 280
BglII AGATCT 2 cut(s) 1051, 1903
BisI GCNGC 4 cut(s) 867, 1035, 1038, 1342
BlsI GCNGC 4 cut(s) 868, 1036, 1039, 1343
Bme1390I CCNGG 3 cut(s) 730, 1720, 2011
Bme18I GGWCC 1 cut(s) 292
BmeT110I CYCGRG 2 cut(s) 324, 435
BmgT120I GGNCC 3 cut(s) 282, 292, 371
BmrFI CCNGG 3 cut(s) 730, 1720, 2011
BmsI GCATC 5 cut(s) 876, 1485, 1727, 1749, 1951
BplI GAGNNNNNCTC 2 cut(s) 1598, 1630
BpmI CTGGAG 1 cut(s) 1116
Bpu10I CCTNAGC 1 cut(s) 1298
BpuMI CCSGG 2 cut(s) 730, 1720
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 1 cut(s) 1718
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 3 cut(s) 325, 354, 441
Bse118I RCCGGY 1 cut(s) 297
Bse1I ACTGG 2 cut(s) 747, 1099
BseBI CCWGG 1 cut(s) 2011
BseDI CCNNGG 1 cut(s) 1718
BseGI GGATG 8 cut(s) 643, 751, 879, 1189, 1742, 1839, 1943, 1981
BseLI CCNNNNNNNGG 3 cut(s) 325, 354, 441
BseMII CTCAG 3 cut(s) 590, 1362, 1587
BseNI ACTGG 2 cut(s) 747, 1099
BseRI GAGGAG 1 cut(s) 1790
BseXI GCAGC 3 cut(s) 878, 1021, 1024
BseYI CCCAGC 1 cut(s) 935
BsgI GTGCAG 1 cut(s) 1717
Bsh1236I CGCG 2 cut(s) 272, 1759
BshFI GGCC 5 cut(s) 159, 283, 372, 1303, 2006
BsiHKAI GWGCWC 2 cut(s) 1272, 1731
BsiHKCI CYCGRG 2 cut(s) 324, 435
BsiSI CCGG 3 cut(s) 298, 729, 1720
BslFI GGGAC 2 cut(s) 1135, 1367
BslI CCNNNNNNNGG 3 cut(s) 325, 354, 441
BsmAI GTCTC 5 cut(s) 39, 62, 337, 1365, 1519
BsmBI CGTCTC 1 cut(s) 337
BsmFI GGGAC 2 cut(s) 1135, 1367
BsmI GAATGC 2 cut(s) 1374, 1435
BsnI GGCC 5 cut(s) 159, 283, 372, 1303, 2006
BsoBI CYCGRG 2 cut(s) 324, 435
Bsp1286I GDGCHC 2 cut(s) 1272, 1731
Bsp1407I TGTACA 1 cut(s) 451
Bsp143I GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
BspACI CCGC 6 cut(s) 240, 295, 1342, 1458, 1734, 2030
BspANI GGCC 5 cut(s) 159, 283, 372, 1303, 2006
BspCNI CTCAG 3 cut(s) 589, 1361, 1588
BspFNI CGCG 2 cut(s) 272, 1759
BspMAI CTGCAG 1 cut(s) 1428
BspPI GGATC 2 cut(s) 377, 1162
BspQI GCTCTTC 1 cut(s) 1277
BsrFI RCCGGY 1 cut(s) 297
BsrGI TGTACA 1 cut(s) 451
BsrI ACTGG 2 cut(s) 747, 1099
BssAI RCCGGY 1 cut(s) 297
BssECI CCNNGG 1 cut(s) 1718
BssMI GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
BssNI GRCGYC 1 cut(s) 312
Bst2UI CCWGG 1 cut(s) 2011
Bst4CI ACNGT 3 cut(s) 595, 782, 1111
Bst6I CTCTTC 4 cut(s) 114, 231, 1277, 1790
BstACI GRCGYC 1 cut(s) 312
BstAPI GCANNNNNTGC 1 cut(s) 932
BstAUI TGTACA 1 cut(s) 451
BstC8I GCNNGC 6 cut(s) 143, 299, 1339, 1657, 1755, 1761
BstDEI CTNAG 4 cut(s) 576, 1298, 1348, 1596
BstF5I GGATG 8 cut(s) 643, 751, 879, 1189, 1742, 1839, 1943, 1981
BstFNI CGCG 2 cut(s) 272, 1759
BstHHI GCGC 2 cut(s) 274, 1759
BstKTI GATC 7 cut(s) 385, 584, 1054, 1107, 1157, 1906, 1933
BstMAI GTCTC 5 cut(s) 39, 62, 337, 1365, 1519
BstMBI GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
BstMWI GCNNNNNNNGC 4 cut(s) 280, 932, 1097, 1574
BstNI CCWGG 1 cut(s) 2011
BstNSI RCATGY 1 cut(s) 1647
BstSCI CCNGG 3 cut(s) 728, 1718, 2009
BstSFI CTRYAG 2 cut(s) 1424, 1806
BstUI CGCG 2 cut(s) 272, 1759
BstV1I GCAGC 3 cut(s) 878, 1021, 1024
BstX2I RGATCY 2 cut(s) 1051, 1903
BstYI RGATCY 2 cut(s) 1051, 1903
BsuRI GGCC 5 cut(s) 159, 283, 372, 1303, 2006
BtsCI GGATG 8 cut(s) 643, 751, 879, 1189, 1742, 1839, 1943, 1981
BtsI GCAGTG 3 cut(s) 831, 1729, 1913
BtsIMutI CAGTG 5 cut(s) 831, 1107, 1127, 1729, 1913
Cac8I GCNNGC 6 cut(s) 143, 299, 1339, 1657, 1755, 1761
CaiI CAGNNNCTG 2 cut(s) 358, 1094
CfoI GCGC 2 cut(s) 274, 1759
Cfr10I RCCGGY 1 cut(s) 297
Cfr13I GGNCC 3 cut(s) 282, 292, 371
CseI GACGC 1 cut(s) 320
Csp6I GTAC 5 cut(s) 452, 838, 1421, 1447, 1705
CspCI CAANNNNNGTGG 2 cut(s) 1515, 1550
CviQI GTAC 5 cut(s) 452, 838, 1421, 1447, 1705
DdeI CTNAG 4 cut(s) 576, 1298, 1348, 1596
DpnI GATC 7 cut(s) 384, 583, 1053, 1106, 1156, 1905, 1932
DpnII GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
EaeI YGGCCR 1 cut(s) 2004
Eam1104I CTCTTC 4 cut(s) 114, 231, 1277, 1790
EarI CTCTTC 4 cut(s) 114, 231, 1277, 1790
EciI GGCGGA 1 cut(s) 284
Ecl136II GAGCTC 1 cut(s) 1270
Eco147I AGGCCT 1 cut(s) 159
Eco24I GRGCYC 1 cut(s) 1272
Eco32I GATATC 1 cut(s) 13
Eco47I GGWCC 1 cut(s) 292
Eco53kI GAGCTC 1 cut(s) 1270
Eco57I CTGAAG 1 cut(s) 1947
Eco88I CYCGRG 2 cut(s) 324, 435
EcoICRI GAGCTC 1 cut(s) 1270
EcoRI GAATTC 1 cut(s) 913
EcoRII CCWGG 1 cut(s) 2009
EcoRV GATATC 1 cut(s) 13
EcoT22I ATGCAT 1 cut(s) 1742
EcoT38I GRGCYC 1 cut(s) 1272
Esp3I CGTCTC 1 cut(s) 337
FaqI GGGAC 2 cut(s) 1135, 1367
FauI CCCGC 2 cut(s) 1451, 2023
Fnu4HI GCNGC 4 cut(s) 867, 1035, 1038, 1342
FokI GGATG 8 cut(s) 650, 758, 886, 1196, 1749, 1846, 1930, 1988
FriOI GRGCYC 1 cut(s) 1272
Fsp4HI GCNGC 4 cut(s) 867, 1035, 1038, 1342
FspBI CTAG 6 cut(s) 1334, 1472, 1500, 1772, 1872, 1955
GlaI GCGC 2 cut(s) 273, 1758
GluI GCNGC 4 cut(s) 867, 1035, 1038, 1342
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 1116
HaeIII GGCC 5 cut(s) 159, 283, 372, 1303, 2006
HapII CCGG 3 cut(s) 298, 729, 1720
HgaI GACGC 1 cut(s) 320
HhaI GCGC 2 cut(s) 274, 1759
Hin1I GRCGYC 1 cut(s) 312
Hin6I GCGC 2 cut(s) 272, 1757
HinP1I GCGC 2 cut(s) 272, 1757
HinfI GANTC 3 cut(s) 80, 1225, 1896
HpaII CCGG 3 cut(s) 298, 729, 1720
HphI GGTGA 7 cut(s) 139, 196, 221, 241, 817, 1565, 1874
Hpy166II GTNNAC 1 cut(s) 249
Hpy188I TCNGA 3 cut(s) 532, 579, 1677
Hpy188III TCNNGA 7 cut(s) 38, 380, 658, 1193, 1256, 1290, 1582
Hpy8I GTNNAC 1 cut(s) 249
HpyCH4III ACNGT 3 cut(s) 595, 782, 1111
HpyCH4IV ACGT 1 cut(s) 364
HpyCH4V TGCA 9 cut(s) 352, 824, 926, 1426, 1698, 1740, 1820, 1918, 1964
HpyF10VI GCNNNNNNNGC 4 cut(s) 280, 932, 1097, 1574
HpyF3I CTNAG 4 cut(s) 576, 1298, 1348, 1596
HpySE526I ACGT 1 cut(s) 364
Hsp92I GRCGYC 1 cut(s) 312
HspAI GCGC 2 cut(s) 272, 1757
KroI GCCGGC 1 cut(s) 297
KroNI GCCGGC 1 cut(s) 299
Kzo9I GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
LguI GCTCTTC 1 cut(s) 1277
LmnI GCTCC 3 cut(s) 1097, 1461, 1995
Lsp1109I GCAGC 3 cut(s) 878, 1021, 1024
LweI GCATC 5 cut(s) 876, 1485, 1727, 1749, 1951
MaeI CTAG 6 cut(s) 1334, 1472, 1500, 1772, 1872, 1955
MaeII ACGT 1 cut(s) 364
MaeIII GTNAC 6 cut(s) 416, 589, 706, 1538, 1618, 1646
MalI GATC 7 cut(s) 384, 583, 1053, 1106, 1156, 1905, 1932
MboI GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
MboII GAAGA 8 cut(s) 78, 101, 218, 634, 1264, 1397, 1807, 1940
MflI RGATCY 2 cut(s) 1051, 1903
MhlI GDGCHC 2 cut(s) 1272, 1731
MlsI TGGCCA 1 cut(s) 2006
MluCI AATT 8 cut(s) 422, 493, 514, 663, 700, 913, 1281, 1527
MluNI TGGCCA 1 cut(s) 2006
MlyI GAGTC 1 cut(s) 74
MmeI TCCRAC 3 cut(s) 615, 976, 1971
Mox20I TGGCCA 1 cut(s) 2006
Mph1103I ATGCAT 1 cut(s) 1742
MroNI GCCGGC 1 cut(s) 297
MscI TGGCCA 1 cut(s) 2006
MseI TTAA 9 cut(s) 63, 170, 408, 425, 597, 879, 1328, 1842, 1986
MslI CAYNNNNRTG 4 cut(s) 459, 858, 1233, 1748
Msp20I TGGCCA 1 cut(s) 2006
MspI CCGG 3 cut(s) 298, 729, 1720
MspR9I CCNGG 3 cut(s) 730, 1720, 2011
Mva1269I GAATGC 2 cut(s) 1374, 1435
MvaI CCWGG 1 cut(s) 2011
MvnI CGCG 2 cut(s) 272, 1759
MwoI GCNNNNNNNGC 4 cut(s) 280, 932, 1097, 1574
NaeI GCCGGC 1 cut(s) 299
NciI CCSGG 2 cut(s) 730, 1720
NdeII GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
NgoMIV GCCGGC 1 cut(s) 297
NmuCI GTSAC 2 cut(s) 1538, 1646
NsiI ATGCAT 1 cut(s) 1742
NspI RCATGY 1 cut(s) 1647
PceI AGGCCT 1 cut(s) 159
PciSI GCTCTTC 1 cut(s) 1277
PcsI WCGNNNNNNNCGW 1 cut(s) 914
PctI GAATGC 2 cut(s) 1374, 1435
PdiI GCCGGC 1 cut(s) 299
PfeI GAWTC 2 cut(s) 1225, 1896
PkrI GCNGC 4 cut(s) 868, 1036, 1039, 1343
PleI GAGTC 1 cut(s) 74
PpsI GAGTC 1 cut(s) 74
PshBI ATTAAT 3 cut(s) 63, 425, 1328
PsiI TTATAA 1 cut(s) 486
Psp124BI GAGCTC 1 cut(s) 1272
Psp6I CCWGG 1 cut(s) 2009
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 1 cut(s) 2009
PspPI GGNCC 3 cut(s) 282, 292, 371
PstI CTGCAG 1 cut(s) 1428
PstNI CAGNNNCTG 2 cut(s) 358, 1094
PsuI RGATCY 2 cut(s) 1051, 1903
RsaI GTAC 5 cut(s) 453, 839, 1422, 1448, 1706
RsaNI GTAC 5 cut(s) 452, 838, 1421, 1447, 1705
RseI CAYNNNNRTG 4 cut(s) 459, 858, 1233, 1748
SacI GAGCTC 1 cut(s) 1272
SapI GCTCTTC 1 cut(s) 1277
SaqAI TTAA 9 cut(s) 63, 170, 408, 425, 597, 879, 1328, 1842, 1986
SatI GCNGC 4 cut(s) 867, 1035, 1038, 1342
Sau3AI GATC 7 cut(s) 382, 581, 1051, 1104, 1154, 1903, 1930
Sau96I GGNCC 3 cut(s) 282, 292, 371
SchI GAGTC 1 cut(s) 74
ScrFI CCNGG 3 cut(s) 730, 1720, 2011
SduI GDGCHC 2 cut(s) 1272, 1731
SfaNI GCATC 5 cut(s) 876, 1485, 1727, 1749, 1951
SfcI CTRYAG 2 cut(s) 1424, 1806
SinI GGWCC 1 cut(s) 292
SmiMI CAYNNNNRTG 4 cut(s) 459, 858, 1233, 1748
Sse9I AATT 8 cut(s) 422, 493, 514, 663, 700, 913, 1281, 1527
SseBI AGGCCT 1 cut(s) 159
SsiI CCGC 6 cut(s) 240, 295, 1342, 1458, 1734, 2030
SspMI CTAG 6 cut(s) 1334, 1472, 1500, 1772, 1872, 1955
SstI GAGCTC 1 cut(s) 1272
StuI AGGCCT 1 cut(s) 159
StyD4I CCNGG 3 cut(s) 728, 1718, 2009
TaaI ACNGT 3 cut(s) 595, 782, 1111
TaiI ACGT 1 cut(s) 367
TaqI TCGA 5 cut(s) 15, 22, 842, 917, 1239
TasI AATT 8 cut(s) 422, 493, 514, 663, 700, 913, 1281, 1527
TatI WGTACW 3 cut(s) 451, 837, 1420
TauI GCSGC 1 cut(s) 1344
TfiI GAWTC 2 cut(s) 1225, 1896
Tru1I TTAA 9 cut(s) 63, 170, 408, 425, 597, 879, 1328, 1842, 1986
Tru9I TTAA 9 cut(s) 63, 170, 408, 425, 597, 879, 1328, 1842, 1986
TscAI CASTG 5 cut(s) 831, 1114, 1134, 1736, 1920
TseFI GTSAC 2 cut(s) 1538, 1646
TseI GCWGC 3 cut(s) 866, 1034, 1037
Tsp45I GTSAC 2 cut(s) 1538, 1646
TspRI CASTG 5 cut(s) 831, 1114, 1134, 1736, 1920
VpaK11BI GGWCC 1 cut(s) 292
VspI ATTAAT 3 cut(s) 63, 425, 1328
XapI RAATTY 5 cut(s) 493, 514, 663, 913, 1281
XceI RCATGY 1 cut(s) 1647
XspI CTAG 6 cut(s) 1334, 1472, 1500, 1772, 1872, 1955
Zsp2I ATGCAT 1 cut(s) 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.