Zinc finger, C3HC4 type (RING finger)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0007251 RchiOBHm_Chr5g0081301 RchiOBHm_Chr5g0081311 |
| rosa_laevigata | RLG00000008382 RLG00000015829 RLG00000015830 |
| rosa_roxburghii | Rroxscaffold_4G00304870 Rroxscaffold_4G00312480 Rroxscaffold_5G00350190 |
| rosa_samantha | Rh4CG116000 |
| rosa_wichuraiana | Rw7G007030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 153 |
| AluBI | AGCT | 3 cut(s) | 114, 139, 151 |
| AluI | AGCT | 3 cut(s) | 114, 139, 151 |
| Alw21I | GWGCWC | 1 cut(s) | 110 |
| AlwI | GGATC | 1 cut(s) | 153 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| Bbv12I | GWGCWC | 1 cut(s) | 110 |
| Bpu10I | CCTNAGC | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 110 |
| Bsp1286I | GDGCHC | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 145 |
| BspCNI | CTCAG | 1 cut(s) | 153 |
| BspPI | GGATC | 1 cut(s) | 153 |
| BssMI | GATC | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 2 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstKTI | GATC | 1 cut(s) | 148 |
| BstMBI | GATC | 1 cut(s) | 145 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 3 cut(s) | 114, 139, 151 |
| CviKI_1 | RGCY | 3 cut(s) | 114, 139, 151 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 1 cut(s) | 147 |
| DpnII | GATC | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 1 cut(s) | 2 |
| EarI | CTCTTC | 1 cut(s) | 2 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 2 cut(s) | 118, 131 |
| FatI | CATG | 1 cut(s) | 129 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy188III | TCNNGA | 1 cut(s) | 156 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 129 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Kzo9I | GATC | 1 cut(s) | 145 |
| LpnPI | CCDG | 4 cut(s) | 45, 51, 81, 127 |
| MalI | GATC | 1 cut(s) | 147 |
| MboI | GATC | 1 cut(s) | 145 |
| MboII | GAAGA | 6 cut(s) | 16, 19, 34, 83, 91, 113 |
| MhlI | GDGCHC | 1 cut(s) | 110 |
| MluCI | AATT | 1 cut(s) | 36 |
| NdeII | GATC | 1 cut(s) | 145 |
| NlaIII | CATG | 1 cut(s) | 133 |
| Sau3AI | GATC | 1 cut(s) | 145 |
| SduI | GDGCHC | 1 cut(s) | 110 |
| SetI | ASST | 3 cut(s) | 116, 141, 153 |
| SgeI | CNNG | 9 cut(s) | 31, 44, 78, 108, 117, 123, 138, 142, 154 |
| SmlI | CTYRAG | 1 cut(s) | 109 |
| SmoI | CTYRAG | 1 cut(s) | 109 |
| Sse9I | AATT | 1 cut(s) | 36 |
| TasI | AATT | 1 cut(s) | 36 |
| TspDTI | ATGAA | 1 cut(s) | 17 |