No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0007251 RchiOBHm_Chr5g0081301 RchiOBHm_Chr5g0081311 |
| rosa_laevigata | RLG00000008382 RLG00000015829 RLG00000015830 |
| rosa_roxburghii | Rroxscaffold_4G00304870 Rroxscaffold_4G00312480 Rroxscaffold_5G00350190 |
| rosa_samantha | Rh4CG116000 |
| rosa_wichuraiana | Rw7G007030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 40 |
| AfaI | GTAC | 1 cut(s) | 72 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 244 |
| AjnI | CCWGG | 1 cut(s) | 184 |
| AluBI | AGCT | 1 cut(s) | 83 |
| AluI | AGCT | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 40 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| AspS9I | GGNCC | 1 cut(s) | 189 |
| AvaII | GGWCC | 1 cut(s) | 189 |
| BauI | CACGAG | 1 cut(s) | 162 |
| BciT130I | CCWGG | 1 cut(s) | 186 |
| BfmI | CTRYAG | 1 cut(s) | 281 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| Bme18I | GGWCC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 1 cut(s) | 189 |
| BmiI | GGNNCC | 1 cut(s) | 190 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| BpuEI | CTTGAG | 1 cut(s) | 224 |
| BsaJI | CCNNGG | 1 cut(s) | 185 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 244 |
| BseBI | CCWGG | 1 cut(s) | 186 |
| BseDI | CCNNGG | 1 cut(s) | 185 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 244 |
| BseRI | GAGGAG | 2 cut(s) | 180, 227 |
| BsiWI | CGTACG | 1 cut(s) | 70 |
| BslFI | GGGAC | 1 cut(s) | 202 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 244 |
| BsmFI | GGGAC | 1 cut(s) | 202 |
| Bsp143I | GATC | 1 cut(s) | 32 |
| BspLI | GGNNCC | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 40 |
| BssECI | CCNNGG | 1 cut(s) | 185 |
| BssMI | GATC | 1 cut(s) | 32 |
| BssSI | CACGAG | 1 cut(s) | 162 |
| Bst2BI | CACGAG | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 2 cut(s) | 70, 97 |
| Bst6I | CTCTTC | 2 cut(s) | 205, 214 |
| BstC8I | GCNNGC | 1 cut(s) | 172 |
| BstKTI | GATC | 1 cut(s) | 35 |
| BstMBI | GATC | 1 cut(s) | 32 |
| BstNI | CCWGG | 1 cut(s) | 186 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstSFI | CTRYAG | 1 cut(s) | 281 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| Cac8I | GCNNGC | 1 cut(s) | 172 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| Cfr13I | GGNCC | 1 cut(s) | 189 |
| Csp6I | GTAC | 1 cut(s) | 71 |
| CviAII | CATG | 1 cut(s) | 274 |
| CviJI | RGCY | 3 cut(s) | 83, 184, 280 |
| CviKI_1 | RGCY | 3 cut(s) | 83, 184, 280 |
| CviQI | GTAC | 1 cut(s) | 71 |
| DpnI | GATC | 1 cut(s) | 34 |
| DpnII | GATC | 1 cut(s) | 32 |
| Eam1104I | CTCTTC | 2 cut(s) | 205, 214 |
| EarI | CTCTTC | 2 cut(s) | 205, 214 |
| Eco47I | GGWCC | 1 cut(s) | 189 |
| EcoO109I | RGGNCCY | 1 cut(s) | 189 |
| EcoRII | CCWGG | 1 cut(s) | 184 |
| FaeI | CATG | 1 cut(s) | 277 |
| FaiI | YATR | 1 cut(s) | 275 |
| FaqI | GGGAC | 1 cut(s) | 202 |
| FatI | CATG | 1 cut(s) | 273 |
| Hin1II | CATG | 1 cut(s) | 277 |
| HinfI | GANTC | 2 cut(s) | 75, 86 |
| Hpy188III | TCNNGA | 1 cut(s) | 30 |
| HpyAV | CCTTC | 2 cut(s) | 187, 242 |
| HpyCH4III | ACNGT | 2 cut(s) | 70, 97 |
| Hsp92II | CATG | 1 cut(s) | 277 |
| Kzo9I | GATC | 1 cut(s) | 32 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 4 cut(s) | 15, 171, 194, 198 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 34 |
| MboI | GATC | 1 cut(s) | 32 |
| MluCI | AATT | 1 cut(s) | 142 |
| MnlI | CCTC | 6 cut(s) | 40, 158, 217, 245, 248, 270 |
| MspA1I | CMGCKG | 1 cut(s) | 83 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| MvaI | CCWGG | 1 cut(s) | 186 |
| NdeII | GATC | 1 cut(s) | 32 |
| NlaIII | CATG | 1 cut(s) | 277 |
| NlaIV | GGNNCC | 1 cut(s) | 190 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| PfeI | GAWTC | 2 cut(s) | 75, 86 |
| Pfl23II | CGTACG | 1 cut(s) | 70 |
| PpuMI | RGGWCCY | 1 cut(s) | 189 |
| Psp5II | RGGWCCY | 1 cut(s) | 189 |
| Psp6I | CCWGG | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 184 |
| PspLI | CGTACG | 1 cut(s) | 70 |
| PspN4I | GGNNCC | 1 cut(s) | 190 |
| PspPI | GGNCC | 1 cut(s) | 189 |
| PspPPI | RGGWCCY | 1 cut(s) | 189 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| PvuII | CAGCTG | 1 cut(s) | 83 |
| RsaI | GTAC | 1 cut(s) | 72 |
| RsaNI | GTAC | 1 cut(s) | 71 |
| Sau3AI | GATC | 1 cut(s) | 32 |
| Sau96I | GGNCC | 1 cut(s) | 189 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SetI | ASST | 4 cut(s) | 51, 85, 179, 194 |
| SfcI | CTRYAG | 1 cut(s) | 281 |
| SinI | GGWCC | 1 cut(s) | 189 |
| SmlI | CTYRAG | 1 cut(s) | 239 |
| SmoI | CTYRAG | 1 cut(s) | 239 |
| Sse9I | AATT | 1 cut(s) | 142 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| TaaI | ACNGT | 2 cut(s) | 70, 97 |
| TasI | AATT | 1 cut(s) | 142 |
| TfiI | GAWTC | 2 cut(s) | 75, 86 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| TspRI | CASTG | 1 cut(s) | 100 |
| VpaK11BI | GGWCC | 1 cut(s) | 189 |