DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g30481 FvH4_1g30560 FvH4_c4g00030 |
| pyrus_communis | pycom05g12520 pycom12g01350 |
| rosa_chinensis | RchiOBHm_Chr7g0214251 |
| rosa_multiflora | Rmu_sc0000410.1_g000007 Rmu_sc0001154.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00313870 Rroxscaffold_4G00323230 Rroxscaffold_5G00382810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 158 |
| AcsI | RAATTY | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AgsI | TTSAA | 2 cut(s) | 228, 234 |
| Alw26I | GTCTC | 1 cut(s) | 66 |
| ApoI | RAATTY | 1 cut(s) | 229 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 36, 70 |
| BclI | TGATCA | 1 cut(s) | 219 |
| BcoDI | GTCTC | 1 cut(s) | 66 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmrI | ACTGGG | 1 cut(s) | 218 |
| BmuI | ACTGGG | 1 cut(s) | 218 |
| BsaI | GGTCTC | 1 cut(s) | 66 |
| BsaWI | WCCGGW | 1 cut(s) | 180 |
| Bse1I | ACTGG | 1 cut(s) | 213 |
| BseNI | ACTGG | 1 cut(s) | 213 |
| BsiSI | CCGG | 1 cut(s) | 181 |
| BsmAI | GTCTC | 1 cut(s) | 66 |
| BsmI | GAATGC | 1 cut(s) | 238 |
| Bso31I | GGTCTC | 1 cut(s) | 66 |
| Bsp143I | GATC | 1 cut(s) | 219 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspTNI | GGTCTC | 1 cut(s) | 66 |
| BsrI | ACTGG | 1 cut(s) | 213 |
| BssMI | GATC | 1 cut(s) | 219 |
| Bst4CI | ACNGT | 2 cut(s) | 54, 145 |
| BstKTI | GATC | 1 cut(s) | 222 |
| BstMAI | GTCTC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 219 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 89 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviJI | RGCY | 2 cut(s) | 34, 81 |
| CviKI_1 | RGCY | 2 cut(s) | 34, 81 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DpnI | GATC | 1 cut(s) | 221 |
| DpnII | GATC | 1 cut(s) | 219 |
| Eco31I | GGTCTC | 1 cut(s) | 66 |
| FaiI | YATR | 6 cut(s) | 45, 66, 90, 114, 158, 218 |
| FbaI | TGATCA | 1 cut(s) | 219 |
| HapII | CCGG | 1 cut(s) | 181 |
| HinfI | GANTC | 1 cut(s) | 8 |
| HpaII | CCGG | 1 cut(s) | 181 |
| HphI | GGTGA | 1 cut(s) | 178 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyCH4III | ACNGT | 2 cut(s) | 54, 145 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 192 |
| Ksp22I | TGATCA | 1 cut(s) | 219 |
| Kzo9I | GATC | 1 cut(s) | 219 |
| LmnI | GCTCC | 1 cut(s) | 183 |
| LpnPI | CCDG | 5 cut(s) | 2, 89, 178, 194, 194 |
| MaeIII | GTNAC | 2 cut(s) | 98, 127 |
| MalI | GATC | 1 cut(s) | 221 |
| MboI | GATC | 1 cut(s) | 219 |
| MluCI | AATT | 4 cut(s) | 28, 132, 223, 229 |
| MmeI | TCCRAC | 1 cut(s) | 229 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspI | CCGG | 1 cut(s) | 181 |
| Mva1269I | GAATGC | 1 cut(s) | 238 |
| NdeII | GATC | 1 cut(s) | 219 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NmuCI | GTSAC | 1 cut(s) | 127 |
| PctI | GAATGC | 1 cut(s) | 238 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PsiI | TTATAA | 1 cut(s) | 158 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| Sau3AI | GATC | 1 cut(s) | 219 |
| SetI | ASST | 2 cut(s) | 24, 201 |
| SgeI | CNNG | 9 cut(s) | 29, 88, 95, 133, 157, 193, 201, 205, 221 |
| Sse9I | AATT | 4 cut(s) | 28, 132, 223, 229 |
| TaaI | ACNGT | 2 cut(s) | 54, 145 |
| TasI | AATT | 4 cut(s) | 28, 132, 223, 229 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseFI | GTSAC | 1 cut(s) | 127 |
| Tsp45I | GTSAC | 1 cut(s) | 127 |
| TspDTI | ATGAA | 2 cut(s) | 17, 21 |
| XapI | RAATTY | 1 cut(s) | 229 |