Rroxscaffold_4G00328050

Calcium-dependent channel, 7TM region, putative phosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005105
Physical Location & Seq
Reverse (-)
60909371 .. 60917472
8102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328050.1

Sequence Viewer

Length: 2016 bp
ATGAACCCTGAAAGTCTGATAGCGTCGGCGGCCATAAACATAGGCCTGGCCATCGTGATTCTCTCACTCTTCTCCATCCTGAAGAAGCAACCCTCGTACGCCCCTATCTACTACCCTCGCCGCCTCTCTCAGTCGCAGTCATTGCAGCCGTCGCAGCGCCACCGCCAAAACATCCCGGATTTCGATGAAGCCTTCACTGTCCGCCGCTTCCTCCCTTCCCTCTCCTGGATTCGCCGCGCCTACCGCGTCTCGGAGGATGAGATCCTCGAGACCAGTGGCCTCGACGCCCTCATCATCATCAGGCTCTTCAAGTTTGGAATCAAATTCTTTTTGGTTTGCTCTCTTATTGGATTGGCAGTACTTGTTCCAGTAAACTACTGTGGCCAGGGTCATCTCATAGCCCACCAGAGTCATCTAGCTGTGAGCCACCATTCCTTGGATCTCTTCAGTATATCTAACATCAGTCCAGGTTCTAACAGACTTGTAGAGTTGGAATATAATGAGATTTTGTCTAAAAGGATTCAACAACTTCGTAACATTAGGCATCAGCCTGATCAGTTCACTGTTCTAGTCCGGGAAATTCCCTTCTGCAATGATCACAGATCTCGCGGATGTTGTGTTGATAAATTCTTCTCTAAGCATCATCCATATGCTTATCATTCTTATCAGATTTTGTACGATGGAAAAGAATTTCAGGAATTGCTGGGCCAGGCAAAATCCATTGAAAGAAAGATAGAGGACTTGAGCAAGCGGTCCATGGGAAAGAAACAAAACGAGACCATGGGAAATAAGAAACATAATGAGACGCCTTTGCTCTCTAATCATTCTCATCAAGATGCTGCTAAATTAGCTTCACATGAGGAAAAGCTTGAAGAGCTTCATCAAAAGATACACCAGTTACAGTCTGAAAATATGCTTAAAGAAAAGGAGTTACCTGTTGCTTTTGTTACATTCAAGTCTCGGTTGGGTGCAGCACTAGTTTCCCAATCTCAGCAGCATGCAGATCCACTTCTTTGGATAACTGACATGGCTCCAGAACCGAGGGATGTATCTTGGAGAAATCTGGTGATACCATACAGAGTTTTGCCACTTTGCAGGCTAGGTGTCATTGTTGCAGCCTCTCTTCTTACAATTTTCTTTGCAATCCCAGTCACTGCTGTCCAGGGCGAAGCATTGCATATCGCTAACTTGCTAAGCAACAATGCAAGGCATCTTTTCTGGAATCTTGCTCTAGAAGTGTTGCACCAGAGTTTGAGAAAAGAATTACCAGGGTTAAGCTCTATCATAACAGGATATCTTCCAAGTGCTGTTCTGAAAGGGTTCATATACATTGTTCCTTTTGCAATGCTTGGAATGGCTAAACTAGCTGGCTGTATATCCAAAAGCAAGGAGGAAATAAAAGCTTCCAACATGGTTTTTTATTTTTTGGTTGGAAATGTGTTCTTTTGGAGCTTGTTATCTGGGTCTTTACTAGATGAAATTGGGCAATCTTTTACTCATCCGAAAGATATTCCTGGTCACCTTGCTACTGCTGTTTCTGCTCAAGCAGACTTCTTTGTGACATATATTTTGACAGATGGACTGTCAGGGTTTTCTTTGGAGATCCTTCAACCAGGTTTACTTTGTTGGGATGCTATAAAGTCTTGTACATATGGCCGGGGGAAAGAGAAAACTCCTTATCTTTACTCATTACCTTACTACAGAATCATTCCTTCAGTCTCACTGTCTGTGCTGATTGGCATGGTTGATATTCTAACTTTGCTTTTAAAATCCAAGTTTGTTATTGTTATTATTCTCATCGTTGTTGGTGTTGGTATTCGTATCGGGATTGAGATTGAGATTGAAGTAGCAGTAAATGCCAAGGAATTTGATGAACTTGATGTGAAGTGCAATGAGATGGAGTTTAACCATGAGAGTGCCAGCATTGCTTATTGCCCACCTTGTTTGCGTCCCTTGAACGTGATGGAATCAGAGCCAAGCTATTCACCTTCCATAGTTTCTACATCATCGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

671

Amino Acids

75.41

Weight (kDa)

7.92

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 6 - 161 1.5e-30 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 186 - 354 3.6e-26 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 367 - 582 1e-40 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 436
AccII CGCG 3 cut(s) 237, 246, 609
AciI CCGC 9 cut(s) 29, 121, 163, 202, 205, 235, 244, 609, 751
AclWI GGATC 4 cut(s) 256, 447, 998, 1597
AcoI YGGCCR 4 cut(s) 30, 48, 382, 1654
AcsI RAATTY 5 cut(s) 323, 579, 626, 689, 1865
AcuI CTGAAG 3 cut(s) 101, 430, 1698
AcyI GRCGYC 2 cut(s) 285, 806
AfaI GTAC 4 cut(s) 98, 360, 677, 1648
AfiI CCNNNNNNNGG 3 cut(s) 225, 250, 436
AgsI TTSAA 8 cut(s) 310, 524, 725, 872, 955, 1610, 1844, 1957
AhlI ACTAGT 1 cut(s) 976
AjnI CCWGG 9 cut(s) 45, 224, 384, 466, 708, 1161, 1267, 1513, 1612
AluBI AGCT 9 cut(s) 419, 851, 868, 877, 1278, 1367, 1403, 1452, 1980
AluI AGCT 9 cut(s) 419, 851, 868, 877, 1278, 1367, 1403, 1452, 1980
Alw26I GTCTC 6 cut(s) 253, 263, 770, 797, 963, 1723
AlwI GGATC 4 cut(s) 256, 447, 998, 1597
AlwNI CAGNNNCTG 1 cut(s) 1154
Ama87I CYCGRG 1 cut(s) 266
AoxI GGCC 7 cut(s) 30, 43, 48, 277, 382, 706, 1654
ApeKI GCWGC 6 cut(s) 145, 154, 839, 971, 994, 1115
ApoI RAATTY 5 cut(s) 323, 579, 626, 689, 1865
ArsI GACNNNNNNTTYG 2 cut(s) 1552, 1584
Asp700I GAANNNNTTC 2 cut(s) 876, 1319
AspLEI GCGC 2 cut(s) 159, 239
AspS9I GGNCC 2 cut(s) 706, 753
AsuC2I CCSGG 3 cut(s) 176, 575, 1658
AsuHPI GGTGA 3 cut(s) 1078, 1511, 1977
AvaI CYCGRG 1 cut(s) 266
AvaII GGWCC 1 cut(s) 753
BaeI ACNNNNGTAYC 2 cut(s) 881, 914
BalI TGGCCA 2 cut(s) 50, 384
BbvI GCAGC 6 cut(s) 157, 166, 826, 983, 1006, 1127
BccI CCATC 6 cut(s) 59, 83, 674, 1571, 1891, 1957
BceAI ACGGC 1 cut(s) 133
BciT130I CCWGG 9 cut(s) 47, 226, 386, 468, 710, 1163, 1269, 1515, 1614
BclI TGATCA 2 cut(s) 553, 595
BcnI CCSGG 3 cut(s) 176, 575, 1658
BcoDI GTCTC 6 cut(s) 253, 263, 770, 797, 963, 1723
BcuI ACTAGT 1 cut(s) 976
BfaI CTAG 7 cut(s) 416, 569, 977, 1100, 1232, 1364, 1472
BfmI CTRYAG 1 cut(s) 1699
BfoI RGCGCY 1 cut(s) 160
BglII AGATCT 1 cut(s) 602
BlpI GCTNAGC 1 cut(s) 1193
BmcAI AGTACT 1 cut(s) 360
Bme18I GGWCC 1 cut(s) 753
BmeT110I CYCGRG 1 cut(s) 266
BmgT120I GGNCC 2 cut(s) 706, 753
BmiI GGNNCC 1 cut(s) 1032
BmrI ACTGGG 1 cut(s) 1142
BmsI GCATC 5 cut(s) 553, 649, 826, 1219, 1621
BmuI ACTGGG 1 cut(s) 1142
BpmI CTGGAG 1 cut(s) 1017
Bpu1102I GCTNAGC 1 cut(s) 1193
BpuEI CTTGAG 2 cut(s) 763, 1527
BpuMI CCSGG 3 cut(s) 176, 575, 1658
Bsa29I ATCGAT 1 cut(s) 2009
BsaHI GRCGYC 2 cut(s) 285, 806
BsaI GGTCTC 2 cut(s) 263, 770
BsaJI CCNNGG 9 cut(s) 385, 435, 756, 780, 1040, 1162, 1268, 1657, 1860
Bsc4I CCNNNNNNNGG 3 cut(s) 225, 250, 436
Bse1I ACTGG 4 cut(s) 273, 368, 895, 1148
Bse3DI GCAATG 6 cut(s) 140, 598, 1172, 1350, 1897, 1923
BseBI CCWGG 9 cut(s) 47, 226, 386, 468, 710, 1163, 1269, 1515, 1614
BseCI ATCGAT 1 cut(s) 2009
BseDI CCNNGG 9 cut(s) 385, 435, 756, 780, 1040, 1162, 1268, 1657, 1860
BseGI GGATG 8 cut(s) 75, 171, 262, 617, 643, 1051, 1498, 1636
BseLI CCNNNNNNNGG 3 cut(s) 225, 250, 436
BseMI GCAATG 6 cut(s) 140, 598, 1172, 1350, 1897, 1923
BseMII CTCAG 2 cut(s) 143, 1004
BseNI ACTGG 4 cut(s) 273, 368, 895, 1148
BseXI GCAGC 6 cut(s) 157, 166, 826, 983, 1006, 1127
BseYI CCCAGC 1 cut(s) 703
BsgI GTGCAG 1 cut(s) 990
Bsh1236I CGCG 3 cut(s) 237, 246, 609
BshFI GGCC 7 cut(s) 32, 45, 50, 279, 384, 708, 1656
BshVI ATCGAT 1 cut(s) 2009
BsiHKCI CYCGRG 1 cut(s) 266
BsiSI CCGG 3 cut(s) 176, 574, 1657
BsiWI CGTACG 1 cut(s) 96
BslFI GGGAC 1 cut(s) 1935
BslI CCNNNNNNNGG 3 cut(s) 225, 250, 436
BsmAI GTCTC 6 cut(s) 253, 263, 770, 797, 963, 1723
BsmBI CGTCTC 2 cut(s) 253, 797
BsmFI GGGAC 1 cut(s) 1935
BsnI GGCC 7 cut(s) 32, 45, 50, 279, 384, 708, 1656
Bso31I GGTCTC 2 cut(s) 263, 770
BsoBI CYCGRG 1 cut(s) 266
Bsp1407I TGTACA 1 cut(s) 1646
Bsp143I GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
Bsp1720I GCTNAGC 1 cut(s) 1193
Bsp19I CCATGG 2 cut(s) 756, 780
BspACI CCGC 9 cut(s) 29, 121, 163, 202, 205, 235, 244, 609, 751
BspANI GGCC 7 cut(s) 32, 45, 50, 279, 384, 708, 1656
BspCNI CTCAG 2 cut(s) 142, 1003
BspDI ATCGAT 1 cut(s) 2009
BspFNI CGCG 3 cut(s) 237, 246, 609
BspLI GGNNCC 1 cut(s) 1032
BspPI GGATC 4 cut(s) 256, 447, 998, 1597
BspQI GCTCTTC 2 cut(s) 311, 867
BspTNI GGTCTC 2 cut(s) 263, 770
BsrDI GCAATG 6 cut(s) 140, 598, 1172, 1350, 1897, 1923
BsrGI TGTACA 1 cut(s) 1646
BsrI ACTGG 4 cut(s) 273, 368, 895, 1148
BssECI CCNNGG 9 cut(s) 385, 435, 756, 780, 1040, 1162, 1268, 1657, 1860
BssMI GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
BssNI GRCGYC 2 cut(s) 285, 806
BssT1I CCWWGG 4 cut(s) 435, 756, 780, 1860
Bst2UI CCWGG 9 cut(s) 47, 226, 386, 468, 710, 1163, 1269, 1515, 1614
Bst4CI ACNGT 6 cut(s) 199, 380, 565, 903, 1584, 1725
Bst6I CTCTTC 5 cut(s) 74, 311, 449, 867, 1128
BstACI GRCGYC 2 cut(s) 285, 806
BstAPI GCANNNNNTGC 2 cut(s) 142, 1856
BstAUI TGTACA 1 cut(s) 1646
BstC8I GCNNGC 5 cut(s) 749, 999, 1097, 1369, 1921
BstDEI CTNAG 4 cut(s) 129, 636, 990, 1193
BstDSI CCRYGG 2 cut(s) 756, 780
BstEII GGTNACC 1 cut(s) 1517
BstF5I GGATG 8 cut(s) 75, 171, 262, 617, 643, 1051, 1498, 1636
BstFNI CGCG 3 cut(s) 237, 246, 609
BstH2I RGCGCY 1 cut(s) 160
BstHHI GCGC 2 cut(s) 159, 239
BstKTI GATC 7 cut(s) 264, 442, 556, 598, 605, 1006, 1605
BstMAI GTCTC 6 cut(s) 253, 263, 770, 797, 963, 1723
BstMBI GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
BstNI CCWGG 9 cut(s) 47, 226, 386, 468, 710, 1163, 1269, 1515, 1614
BstNSI RCATGY 1 cut(s) 1001
BstPI GGTNACC 1 cut(s) 1517
BstSFI CTRYAG 1 cut(s) 1699
BstUI CGCG 3 cut(s) 237, 246, 609
BstV1I GCAGC 6 cut(s) 157, 166, 826, 983, 1006, 1127
BstX2I RGATCY 5 cut(s) 261, 439, 602, 1003, 1602
BstXI CCANNNNNNTGG 1 cut(s) 1014
BstYI RGATCY 5 cut(s) 261, 439, 602, 1003, 1602
Bsu15I ATCGAT 1 cut(s) 2009
BsuRI GGCC 7 cut(s) 32, 45, 50, 279, 384, 708, 1656
BsuTUI ATCGAT 1 cut(s) 2009
BtgI CCRYGG 2 cut(s) 756, 780
BtsCI GGATG 8 cut(s) 75, 171, 262, 617, 643, 1051, 1498, 1636
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 5 cut(s) 195, 280, 561, 1152, 1721
Cac8I GCNNGC 5 cut(s) 749, 999, 1097, 1369, 1921
CaiI CAGNNNCTG 1 cut(s) 1154
CfoI GCGC 2 cut(s) 159, 239
Cfr13I GGNCC 2 cut(s) 706, 753
ClaI ATCGAT 1 cut(s) 2009
CseI GACGC 5 cut(s) 12, 235, 293, 814, 1937
CsiI ACCWGGT 1 cut(s) 1612
Csp6I GTAC 4 cut(s) 97, 359, 676, 1647
CspCI CAANNNNNGTGG 2 cut(s) 1926, 1961
CviAII CATG 8 cut(s) 757, 781, 857, 998, 1027, 1411, 1741, 1910
CviQI GTAC 4 cut(s) 97, 359, 676, 1647
DdeI CTNAG 4 cut(s) 129, 636, 990, 1193
DpnI GATC 7 cut(s) 263, 441, 555, 597, 604, 1005, 1604
DpnII GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
DraI TTTAAA 1 cut(s) 1767
EaeI YGGCCR 4 cut(s) 30, 48, 382, 1654
Eam1104I CTCTTC 5 cut(s) 74, 311, 449, 867, 1128
EarI CTCTTC 5 cut(s) 74, 311, 449, 867, 1128
EciI GGCGGA 1 cut(s) 191
Eco130I CCWWGG 4 cut(s) 435, 756, 780, 1860
Eco147I AGGCCT 1 cut(s) 45
Eco31I GGTCTC 2 cut(s) 263, 770
Eco32I GATATC 1 cut(s) 1295
Eco47I GGWCC 1 cut(s) 753
Eco57I CTGAAG 3 cut(s) 101, 430, 1698
Eco88I CYCGRG 1 cut(s) 266
Eco91I GGTNACC 1 cut(s) 1517
EcoO65I GGTNACC 1 cut(s) 1517
EcoRII CCWGG 9 cut(s) 45, 224, 384, 466, 708, 1161, 1267, 1513, 1612
EcoRV GATATC 1 cut(s) 1295
EcoT14I CCWWGG 4 cut(s) 435, 756, 780, 1860
ErhI CCWWGG 4 cut(s) 435, 756, 780, 1860
Esp3I CGTCTC 2 cut(s) 253, 797
FaeI CATG 8 cut(s) 760, 784, 860, 1001, 1030, 1414, 1744, 1913
FaqI GGGAC 1 cut(s) 1935
FatI CATG 8 cut(s) 756, 780, 856, 997, 1026, 1410, 1740, 1909
FauNDI CATATG 2 cut(s) 649, 1651
FbaI TGATCA 2 cut(s) 553, 595
FokI GGATG 8 cut(s) 62, 158, 269, 624, 630, 1058, 1485, 1643
FspBI CTAG 7 cut(s) 416, 569, 977, 1100, 1232, 1364, 1472
GlaI GCGC 2 cut(s) 158, 238
GsaI CCCAGC 1 cut(s) 707
GsuI CTGGAG 1 cut(s) 1017
HaeII RGCGCY 1 cut(s) 160
HaeIII GGCC 7 cut(s) 32, 45, 50, 279, 384, 708, 1656
HapII CCGG 3 cut(s) 176, 574, 1657
HgaI GACGC 5 cut(s) 12, 235, 293, 814, 1937
HhaI GCGC 2 cut(s) 159, 239
Hin1I GRCGYC 2 cut(s) 285, 806
Hin1II CATG 8 cut(s) 760, 784, 860, 1001, 1030, 1414, 1744, 1913
Hin6I GCGC 2 cut(s) 157, 237
HinP1I GCGC 2 cut(s) 157, 237
HindIII AAGCTT 2 cut(s) 866, 1401
HinfI GANTC 8 cut(s) 58, 229, 318, 409, 520, 1222, 1704, 1967
HpaII CCGG 3 cut(s) 176, 574, 1657
HphI GGTGA 3 cut(s) 1078, 1511, 1977
Hpy166II GTNNAC 3 cut(s) 373, 561, 1619
Hpy188I TCNGA 7 cut(s) 18, 253, 669, 907, 1314, 1503, 1972
Hpy188III TCNNGA 9 cut(s) 55, 79, 268, 695, 833, 1034, 1219, 1232, 1825
Hpy8I GTNNAC 3 cut(s) 373, 561, 1619
Hpy99I CGWCG 3 cut(s) 28, 154, 287
HpyAV CCTTC 6 cut(s) 202, 225, 595, 1616, 1722, 1998
HpyCH4III ACNGT 6 cut(s) 199, 380, 565, 903, 1584, 1725
HpyCH4IV ACGT 1 cut(s) 1959
HpyF3I CTNAG 4 cut(s) 129, 636, 990, 1193
HpySE526I ACGT 1 cut(s) 1959
Hsp92I GRCGYC 2 cut(s) 285, 806
Hsp92II CATG 8 cut(s) 760, 784, 860, 1001, 1030, 1414, 1744, 1913
HspAI GCGC 2 cut(s) 157, 237
Ksp22I TGATCA 2 cut(s) 553, 595
Kzo9I GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
LguI GCTCTTC 2 cut(s) 311, 867
LmnI GCTCC 2 cut(s) 1036, 1449
Lsp1109I GCAGC 6 cut(s) 157, 166, 826, 983, 1006, 1127
LweI GCATC 5 cut(s) 553, 649, 826, 1219, 1621
MabI ACCWGGT 1 cut(s) 1612
MaeI CTAG 7 cut(s) 416, 569, 977, 1100, 1232, 1364, 1472
MaeII ACGT 1 cut(s) 1959
MaeIII GTNAC 7 cut(s) 533, 897, 930, 946, 1150, 1517, 1558
MalI GATC 7 cut(s) 263, 441, 555, 597, 604, 1005, 1604
MboI GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
MboII GAAGA 8 cut(s) 61, 94, 298, 436, 622, 884, 1115, 1289
MflI RGATCY 5 cut(s) 261, 439, 602, 1003, 1602
MlsI TGGCCA 2 cut(s) 50, 384
MluNI TGGCCA 2 cut(s) 50, 384
MlyI GAGTC 1 cut(s) 418
MmeI TCCRAC 3 cut(s) 471, 1411, 1431
Mox20I TGGCCA 2 cut(s) 50, 384
MroXI GAANNNNTTC 2 cut(s) 876, 1319
MscI TGGCCA 2 cut(s) 50, 384
MseI TTAA 5 cut(s) 918, 1274, 1766, 1905, 2014
MslI CAYNNNNRTG 3 cut(s) 648, 834, 1914
Msp20I TGGCCA 2 cut(s) 50, 384
MspI CCGG 3 cut(s) 176, 574, 1657
MvaI CCWGG 9 cut(s) 47, 226, 386, 468, 710, 1163, 1269, 1515, 1614
MvnI CGCG 3 cut(s) 237, 246, 609
NciI CCSGG 3 cut(s) 176, 575, 1658
NcoI CCATGG 2 cut(s) 756, 780
NdeI CATATG 2 cut(s) 649, 1651
NdeII GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
NlaIII CATG 8 cut(s) 760, 784, 860, 1001, 1030, 1414, 1744, 1913
NlaIV GGNNCC 1 cut(s) 1032
NmuCI GTSAC 3 cut(s) 1150, 1517, 1558
NspI RCATGY 1 cut(s) 1001
PaeI GCATGC 1 cut(s) 1001
PaeR7I CTCGAG 1 cut(s) 266
PceI AGGCCT 1 cut(s) 45
PciSI GCTCTTC 2 cut(s) 311, 867
PdmI GAANNNNTTC 2 cut(s) 876, 1319
PfeI GAWTC 7 cut(s) 58, 229, 318, 520, 1222, 1704, 1967
Pfl23II CGTACG 1 cut(s) 96
PflMI CCANNNNNTGG 1 cut(s) 436
PfoI TCCNGGA 3 cut(s) 174, 224, 573
PleI GAGTC 1 cut(s) 417
PpsI GAGTC 1 cut(s) 417
Psp6I CCWGG 9 cut(s) 45, 224, 384, 466, 708, 1161, 1267, 1513, 1612
PspEI GGTNACC 1 cut(s) 1517
PspFI CCCAGC 1 cut(s) 703
PspGI CCWGG 9 cut(s) 45, 224, 384, 466, 708, 1161, 1267, 1513, 1612
PspLI CGTACG 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 1032
PspPI GGNCC 2 cut(s) 706, 753
PstNI CAGNNNCTG 1 cut(s) 1154
PsuI RGATCY 5 cut(s) 261, 439, 602, 1003, 1602
RsaI GTAC 4 cut(s) 98, 360, 677, 1648
RsaNI GTAC 4 cut(s) 97, 359, 676, 1647
RseI CAYNNNNRTG 3 cut(s) 648, 834, 1914
SapI GCTCTTC 2 cut(s) 311, 867
SaqAI TTAA 5 cut(s) 918, 1274, 1766, 1905, 2014
Sau3AI GATC 7 cut(s) 261, 439, 553, 595, 602, 1003, 1602
Sau96I GGNCC 2 cut(s) 706, 753
ScaI AGTACT 1 cut(s) 360
SchI GAGTC 1 cut(s) 418
SexAI ACCWGGT 1 cut(s) 1612
SfaNI GCATC 5 cut(s) 553, 649, 826, 1219, 1621
SfcI CTRYAG 1 cut(s) 1699
Sfr274I CTCGAG 1 cut(s) 266
SinI GGWCC 1 cut(s) 753
SlaI CTCGAG 1 cut(s) 266
SmiMI CAYNNNNRTG 3 cut(s) 648, 834, 1914
SmlI CTYRAG 3 cut(s) 266, 742, 1542
SmoI CTYRAG 3 cut(s) 266, 742, 1542
SpeI ACTAGT 1 cut(s) 976
SphI GCATGC 1 cut(s) 1001
SseBI AGGCCT 1 cut(s) 45
SsiI CCGC 9 cut(s) 29, 121, 163, 202, 205, 235, 244, 609, 751
SspMI CTAG 7 cut(s) 416, 569, 977, 1100, 1232, 1364, 1472
StuI AGGCCT 1 cut(s) 45
StyI CCWWGG 4 cut(s) 435, 756, 780, 1860
TaaI ACNGT 6 cut(s) 199, 380, 565, 903, 1584, 1725
TaiI ACGT 1 cut(s) 1962
TaqI TCGA 4 cut(s) 183, 267, 282, 2009
TatI WGTACW 2 cut(s) 358, 1646
TauI GCSGC 4 cut(s) 32, 123, 207, 237
TfiI GAWTC 7 cut(s) 58, 229, 318, 520, 1222, 1704, 1967
Tru1I TTAA 5 cut(s) 918, 1274, 1766, 1905, 2014
Tru9I TTAA 5 cut(s) 918, 1274, 1766, 1905, 2014
TscAI CASTG 5 cut(s) 202, 280, 568, 1159, 1728
TseFI GTSAC 3 cut(s) 1150, 1517, 1558
TseI GCWGC 6 cut(s) 145, 154, 839, 971, 994, 1115
Tsp45I GTSAC 3 cut(s) 1150, 1517, 1558
TspDTI ATGAA 6 cut(s) 17, 201, 869, 1312, 1491, 1887
TspRI CASTG 5 cut(s) 202, 280, 568, 1159, 1728
Van91I CCANNNNNTGG 1 cut(s) 436
VpaK11BI GGWCC 1 cut(s) 753
XapI RAATTY 5 cut(s) 323, 579, 626, 689, 1865
XbaI TCTAGA 1 cut(s) 1231
XceI RCATGY 1 cut(s) 1001
XhoI CTCGAG 1 cut(s) 266
XmnI GAANNNNTTC 2 cut(s) 876, 1319
XspI CTAG 7 cut(s) 416, 569, 977, 1100, 1232, 1364, 1472
ZrmI AGTACT 1 cut(s) 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.