Tesmin/TSO1-like CXC domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_co8357603.1_g000001 Rmu_sc0000206.1_g000010 Rmu_sc0002183.1_g000014 Rmu_ssc0000252.1_g000016 Rmu_ssc0000486.1_g000035 |
| rosa_roxburghii | Rroxscaffold_1G00009430 Rroxscaffold_1G00029980 Rroxscaffold_2G00082580 Rroxscaffold_4G00317760 Rroxscaffold_5G00359590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 76 |
| AfaI | GTAC | 1 cut(s) | 98 |
| AgsI | TTSAA | 1 cut(s) | 92 |
| AluBI | AGCT | 1 cut(s) | 59 |
| AluI | AGCT | 1 cut(s) | 59 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 169, 203 |
| BfuAI | ACCTGC | 1 cut(s) | 76 |
| BmsI | GCATC | 1 cut(s) | 21 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| BseMII | CTCAG | 1 cut(s) | 26 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 243 |
| BspMI | ACCTGC | 1 cut(s) | 76 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 35 |
| BveI | ACCTGC | 1 cut(s) | 76 |
| CciI | TCATGA | 1 cut(s) | 243 |
| Csp6I | GTAC | 1 cut(s) | 97 |
| CviAII | CATG | 1 cut(s) | 244 |
| CviJI | RGCY | 3 cut(s) | 5, 24, 59 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 24, 59 |
| CviQI | GTAC | 1 cut(s) | 97 |
| DdeI | CTNAG | 1 cut(s) | 35 |
| FaeI | CATG | 1 cut(s) | 247 |
| FaiI | YATR | 3 cut(s) | 74, 79, 245 |
| FatI | CATG | 1 cut(s) | 243 |
| Hin1II | CATG | 1 cut(s) | 247 |
| HincII | GTYRAC | 1 cut(s) | 132 |
| HindII | GTYRAC | 1 cut(s) | 132 |
| HinfI | GANTC | 2 cut(s) | 37, 191 |
| Hpy166II | GTNNAC | 1 cut(s) | 132 |
| Hpy188I | TCNGA | 2 cut(s) | 63, 221 |
| Hpy188III | TCNNGA | 2 cut(s) | 92, 244 |
| Hpy8I | GTNNAC | 1 cut(s) | 132 |
| Hpy99I | CGWCG | 1 cut(s) | 52 |
| HpyCH4V | TGCA | 2 cut(s) | 125, 180 |
| HpyF3I | CTNAG | 1 cut(s) | 35 |
| Hsp92II | CATG | 1 cut(s) | 247 |
| LpnPI | CCDG | 3 cut(s) | 54, 71, 180 |
| LweI | GCATC | 1 cut(s) | 21 |
| MaeIII | GTNAC | 1 cut(s) | 43 |
| MluCI | AATT | 1 cut(s) | 161 |
| MlyI | GAGTC | 1 cut(s) | 46 |
| MnlI | CCTC | 1 cut(s) | 215 |
| NlaIII | CATG | 1 cut(s) | 247 |
| NmuCI | GTSAC | 1 cut(s) | 43 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| PagI | TCATGA | 1 cut(s) | 243 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| PleI | GAGTC | 1 cut(s) | 45 |
| PpsI | GAGTC | 1 cut(s) | 45 |
| RsaI | GTAC | 1 cut(s) | 98 |
| RsaNI | GTAC | 1 cut(s) | 97 |
| SchI | GAGTC | 1 cut(s) | 46 |
| SetI | ASST | 4 cut(s) | 61, 70, 90, 255 |
| SfaNI | GCATC | 1 cut(s) | 21 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 161 |
| SspI | AATATT | 1 cut(s) | 229 |
| TaqI | TCGA | 2 cut(s) | 8, 189 |
| TasI | AATT | 1 cut(s) | 161 |
| TatI | WGTACW | 1 cut(s) | 96 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| TseFI | GTSAC | 1 cut(s) | 43 |
| Tsp45I | GTSAC | 1 cut(s) | 43 |
| TspDTI | ATGAA | 2 cut(s) | 174, 232 |