Rroxscaffold_5G00380190

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0011117
Physical Location & Seq
Forward (+)
60332719 .. 60337325
4607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00380190.1

Sequence Viewer

Length: 1566 bp
ATGGAGGTTAGATCTGAGGGTGTCCATGTCCGCTGCGATAAGCTTCCGTCGCCGAGGATTGCGTCCTCGCCGGTGATTCAGTCGCCCAAGCTTCCGCCGTCGCCGGCGATTCCGTCGCCGGCGATTGCGAGGACGCGTCTGCAGGTGTGGTTCATACGGTTGTGCTCAAGCTTGTTTGTGTGGACTTGTTTGGTTCAGTTGGTGGCGGTCGGGGAGTTTTGGAGTCCGCATTTGTTCTCCAACTTAACCAATCGGATATCCCAAATTACACAGATTCCCGCTCAGGGGGTTCTTTCTCCGCCGCCTCTTCCTCCTGCAAGAAATTATACAAGTAATGGGTTTCTTAGAGTTTCATGCAACGGGGGCTTGAATCAAATGCGTGCTGCGATTTGTGACATGGTGACTGTTGCTCGGCTTTTAAATCTCACTTTGGTTGTTCCAGAGCTTGATAAGACATCTTTCTGGGCCGATCCTAGTAATTTTGAGGATATATTTGATTTAAGACATTTCATTGATTCACTGAGAGACGAAGTCCGAATTGTCAGAAGACTGCCAAAAAACTTTAGTAGGAAATATGGGTATAAACCACTCGAGATGCCTCCTGTTAGTTGGTCAAATGAAAAATACTATCTCGAACAGATTCTGCCACTTGTTAGCAAGCATAAGGTGTTGCACTTTAACAGAACAGATACACGCTTGGCAAACAATTGGATACCTCTTGATCTTCAGAAACTCAGGTGTCGCGTTAATTTCCAGGCGCTGAAGTTCACTCCAAAGATTGAGTCTTTGGGTTACAAATTGGTTCGTATGCTTCAAGAAAAGGGACCTTTCGTGACTTTGCATCTAAGGTATGAGATGGACATGCTGGCTTTCTCAGGTTGTACTCATGGCTGCACAGCTGAAGAAGCCGAGGAGCTCAAACGGTTAAGGTATGCATATCCTTGGTGGAGAGAGAAAGAGATAGTGTCTGAAGAGAAGAGGTCTCAAGGGCTGTGTCCTCTGACACCAGAGGAAAGTGCATTAATTTTGCAAGCATTGGGTATTAGCAAAGACACACAGATCTATATTGCAGCTGGTGAGATTTATGGCAGGGACAGGAGACTTGCACCGCTAAGAGCTGCGTTTCCCCGAATTGTCAAGAAGGAAACTCTTCTCGCACCAGAGGAATTGCAACAATTTCAGAATCATTCATCTCAAATGGCTGCTTTGGATTTTATGGTTGCGGTAGCCAGTAATACTTTTGTCCCTACCTATGATGGAAACATGGCGAAGCTTGTTGAAGGTCACCGTAGGTATCTTGGTTTTAAAAAAAGCATCTTGCTAGATCGGAAAAAACTTGTCGAGTTATTAGACATGCATTTAAATGGGACTCTTTCGTGGAATGGGTTTGCACTTGCTGTAAGATCCGTTCATGAGAGAAGAATGGGACAGCCAACTCAGCGAACAGTTATCCCAGAGAAGCCAAAGGAGGAGGACTATTTTTATGCAAATCCTCAGGAGTGCCTCTGCATGGGAACGAATTGTGATGACTTGCTTAGCCGTGGTAACTTAAGTAAACCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

521

Amino Acids

59.62

Weight (kDa)

9.29

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 114 - 433 4.7e-108 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14020 AT2G03280
fragaria_vesca FvH4_4g30810
malus_domestica MD00G1080900.v1.1 MD16G1067800.v1.1
prunus_persica Prupe.1G279000_v2.0.a1
pyrus_communis pycom13g06080 pycom16g05930 pycom16g05940
rosa_chinensis RchiOBHm_Chr4g0439201
rosa_laevigata RLG00000006288
rosa_multiflora Rmu_sc0002236.1_g000012
rosa_roxburghii Rroxscaffold_5G00380190
rosa_rugosa Rorug04G0317000
rosa_samantha Rh4AG367500 Rh4CG393500 Rh4DG373700
rosa_wichuraiana Rw0G005660 Rw0G011650 Rw5G028530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 133
Acc36I ACCTGC 1 cut(s) 133
AccBSI CCGCTC 1 cut(s) 281
AccII CGCG 2 cut(s) 136, 744
AciI CCGC 9 cut(s) 31, 95, 206, 227, 279, 299, 302, 1109, 1223
AclWI GGATC 2 cut(s) 464, 1398
AcuI CTGAAG 4 cut(s) 710, 782, 921, 990
AfaI GTAC 1 cut(s) 883
AfiI CCNNNNNNNGG 3 cut(s) 284, 285, 1510
AflII CTTAAG 1 cut(s) 1549
AflIII ACRYGT 1 cut(s) 134
AgsI TTSAA 3 cut(s) 370, 815, 1280
AjnI CCWGG 1 cut(s) 753
AluBI AGCT 9 cut(s) 43, 91, 171, 445, 899, 916, 1073, 1118, 1273
AluI AGCT 9 cut(s) 43, 91, 171, 445, 899, 916, 1073, 1118, 1273
Alw21I GWGCWC 2 cut(s) 167, 918
Alw26I GTCTC 3 cut(s) 519, 987, 1093
AlwI GGATC 2 cut(s) 464, 1398
AlwNI CAGNNNCTG 2 cut(s) 643, 760
Ama87I CYCGRG 1 cut(s) 590
AoxI GGCC 1 cut(s) 465
ApeKI GCWGC 6 cut(s) 33, 383, 891, 1070, 1118, 1202
ArsI GACNNNNNNTTYG 2 cut(s) 767, 799
AseI ATTAAT 1 cut(s) 1022
Asp700I GAANNNNTTC 2 cut(s) 639, 1149
AspA2I CCTAGG 1 cut(s) 1559
AspLEI GCGC 1 cut(s) 760
AspS9I GGNCC 2 cut(s) 465, 824
AsuHPI GGTGA 4 cut(s) 85, 412, 1088, 1277
AvaI CYCGRG 1 cut(s) 590
AvaII GGWCC 1 cut(s) 824
AvrII CCTAGG 1 cut(s) 1559
AxyI CCTNAGG 1 cut(s) 1494
BanII GRGCYC 1 cut(s) 918
BbsI GAAGAC 1 cut(s) 553
Bbv12I GWGCWC 2 cut(s) 167, 918
BbvI GCAGC 6 cut(s) 20, 370, 878, 1082, 1105, 1189
BccI CCATC 2 cut(s) 850, 1250
BceAI ACGGC 2 cut(s) 82, 1524
BciT130I CCWGG 1 cut(s) 755
BciVI GTATCC 1 cut(s) 705
BcoDI GTCTC 3 cut(s) 519, 987, 1093
BfaI CTAG 3 cut(s) 474, 1322, 1560
BfmI CTRYAG 1 cut(s) 140
BfoI RGCGCY 1 cut(s) 761
BfrI CTTAAG 1 cut(s) 1549
BfuAI ACCTGC 1 cut(s) 133
BfuI GTATCC 1 cut(s) 705
BglII AGATCT 2 cut(s) 11, 1059
BisI GCNGC 7 cut(s) 34, 302, 384, 892, 1071, 1119, 1203
BlnI CCTAGG 1 cut(s) 1559
BlpI GCTNAGC 1 cut(s) 1535
BlsI GCNGC 7 cut(s) 35, 303, 385, 893, 1072, 1120, 1204
Bme1390I CCNGG 1 cut(s) 755
Bme18I GGWCC 1 cut(s) 824
BmeT110I CYCGRG 1 cut(s) 590
BmgT120I GGNCC 2 cut(s) 465, 824
BmiI GGNNCC 1 cut(s) 825
BmrFI CCNGG 1 cut(s) 755
BmsI GCATC 3 cut(s) 585, 850, 1323
BpiI GAAGAC 1 cut(s) 553
Bpu10I CCTNAGC 1 cut(s) 282
Bpu1102I GCTNAGC 1 cut(s) 1535
BpuEI CTTGAG 2 cut(s) 151, 969
BsaI GGTCTC 1 cut(s) 987
BsaJI CCNNGG 5 cut(s) 53, 909, 941, 1540, 1559
Bsc4I CCNNNNNNNGG 3 cut(s) 284, 285, 1510
Bse118I RCCGGY 3 cut(s) 70, 103, 118
Bse1I ACTGG 1 cut(s) 1230
Bse21I CCTNAGG 1 cut(s) 1494
BseBI CCWGG 1 cut(s) 755
BseDI CCNNGG 5 cut(s) 53, 909, 941, 1540, 1559
BseLI CCNNNNNNNGG 3 cut(s) 284, 285, 1510
BseMII CTCAG 7 cut(s) 6, 296, 512, 748, 888, 1451, 1508
BseNI ACTGG 1 cut(s) 1230
BseRI GAGGAG 2 cut(s) 926, 1484
BseXI GCAGC 6 cut(s) 20, 370, 878, 1082, 1105, 1189
BsgI GTGCAG 1 cut(s) 877
Bsh1236I CGCG 2 cut(s) 136, 744
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 1 cut(s) 467
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 2 cut(s) 167, 918
BsiHKCI CYCGRG 1 cut(s) 590
BsiSI CCGG 3 cut(s) 71, 104, 119
BslFI GGGAC 5 cut(s) 837, 1106, 1229, 1381, 1440
BslI CCNNNNNNNGG 3 cut(s) 284, 285, 1510
BsmAI GTCTC 3 cut(s) 519, 987, 1093
BsmBI CGTCTC 1 cut(s) 519
BsmFI GGGAC 5 cut(s) 837, 1106, 1229, 1381, 1440
BsnI GGCC 1 cut(s) 467
Bso31I GGTCTC 1 cut(s) 987
BsoBI CYCGRG 1 cut(s) 590
Bsp1286I GDGCHC 2 cut(s) 167, 918
Bsp143I GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
Bsp1720I GCTNAGC 1 cut(s) 1535
BspACI CCGC 9 cut(s) 31, 95, 206, 227, 279, 299, 302, 1109, 1223
BspANI GGCC 1 cut(s) 467
BspCNI CTCAG 7 cut(s) 7, 295, 513, 747, 887, 1450, 1507
BspFNI CGCG 2 cut(s) 136, 744
BspHI TCATGA 1 cut(s) 1411
BspLI GGNNCC 1 cut(s) 825
BspMAI CTGCAG 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 2 cut(s) 464, 1398
BspTI CTTAAG 1 cut(s) 1549
BspTNI GGTCTC 1 cut(s) 987
BsrBI CCGCTC 1 cut(s) 281
BsrFI RCCGGY 3 cut(s) 70, 103, 118
BsrI ACTGG 1 cut(s) 1230
BssAI RCCGGY 3 cut(s) 70, 103, 118
BssECI CCNNGG 5 cut(s) 53, 909, 941, 1540, 1559
BssMI GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
BssT1I CCWWGG 2 cut(s) 941, 1559
Bst2UI CCWGG 1 cut(s) 755
Bst4CI ACNGT 5 cut(s) 159, 406, 924, 1289, 1447
Bst6I CTCTTC 4 cut(s) 312, 966, 971, 1155
BstAFI CTTAAG 1 cut(s) 1549
BstC8I GCNNGC 6 cut(s) 105, 120, 381, 659, 867, 1032
BstDSI CCRYGG 1 cut(s) 1540
BstEII GGTNACC 1 cut(s) 1283
BstFNI CGCG 2 cut(s) 136, 744
BstH2I RGCGCY 1 cut(s) 761
BstHHI GCGC 1 cut(s) 760
BstKTI GATC 6 cut(s) 14, 472, 724, 1062, 1327, 1406
BstMAI GTCTC 3 cut(s) 519, 987, 1093
BstMBI GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
BstMCI CGRYCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 4 cut(s) 49, 363, 905, 1438
BstNI CCWGG 1 cut(s) 755
BstNSI RCATGY 2 cut(s) 865, 1357
BstPI GGTNACC 1 cut(s) 1283
BstSCI CCNGG 1 cut(s) 753
BstSFI CTRYAG 1 cut(s) 140
BstUI CGCG 2 cut(s) 136, 744
BstV1I GCAGC 6 cut(s) 20, 370, 878, 1082, 1105, 1189
BstV2I GAAGAC 1 cut(s) 553
BstX2I RGATCY 3 cut(s) 11, 1059, 1403
BstYI RGATCY 3 cut(s) 11, 1059, 1403
Bsu36I CCTNAGG 1 cut(s) 1494
BsuI GTATCC 1 cut(s) 705
BsuRI GGCC 1 cut(s) 467
BtgI CCRYGG 1 cut(s) 1540
BtsIMutI CAGTG 1 cut(s) 518
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 6 cut(s) 105, 120, 381, 659, 867, 1032
CaiI CAGNNNCTG 2 cut(s) 643, 760
CciI TCATGA 1 cut(s) 1411
CfoI GCGC 1 cut(s) 760
Cfr10I RCCGGY 3 cut(s) 70, 103, 118
Cfr13I GGNCC 2 cut(s) 465, 824
CseI GACGC 3 cut(s) 51, 125, 142
Csp6I GTAC 1 cut(s) 882
CviAII CATG 9 cut(s) 26, 354, 397, 862, 887, 1264, 1354, 1412, 1510
CviQI GTAC 1 cut(s) 882
DpnI GATC 6 cut(s) 13, 471, 723, 1061, 1326, 1405
DpnII GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
DraI TTTAAA 3 cut(s) 420, 1306, 1362
Eam1104I CTCTTC 4 cut(s) 312, 966, 971, 1155
EarI CTCTTC 4 cut(s) 312, 966, 971, 1155
EciI GGCGGA 2 cut(s) 84, 288
Ecl136II GAGCTC 1 cut(s) 916
Eco130I CCWWGG 2 cut(s) 941, 1559
Eco24I GRGCYC 1 cut(s) 918
Eco31I GGTCTC 1 cut(s) 987
Eco32I GATATC 1 cut(s) 258
Eco47I GGWCC 1 cut(s) 824
Eco53kI GAGCTC 1 cut(s) 916
Eco57I CTGAAG 4 cut(s) 710, 782, 921, 990
Eco81I CCTNAGG 1 cut(s) 1494
Eco88I CYCGRG 1 cut(s) 590
Eco91I GGTNACC 1 cut(s) 1283
EcoICRI GAGCTC 1 cut(s) 916
EcoO109I RGGNCCY 1 cut(s) 824
EcoO65I GGTNACC 1 cut(s) 1283
EcoRII CCWGG 1 cut(s) 753
EcoRV GATATC 1 cut(s) 258
EcoT14I CCWWGG 2 cut(s) 941, 1559
EcoT22I ATGCAT 2 cut(s) 937, 1359
EcoT38I GRGCYC 1 cut(s) 918
ErhI CCWWGG 2 cut(s) 941, 1559
Esp3I CGTCTC 1 cut(s) 519
FaeI CATG 9 cut(s) 29, 357, 400, 865, 890, 1267, 1357, 1415, 1513
FaqI GGGAC 5 cut(s) 837, 1106, 1229, 1381, 1440
FatI CATG 9 cut(s) 25, 353, 396, 861, 886, 1263, 1353, 1411, 1509
FauI CCCGC 1 cut(s) 286
Fnu4HI GCNGC 7 cut(s) 34, 302, 384, 892, 1071, 1119, 1203
FriOI GRGCYC 1 cut(s) 918
Fsp4HI GCNGC 7 cut(s) 34, 302, 384, 892, 1071, 1119, 1203
FspBI CTAG 3 cut(s) 474, 1322, 1560
GlaI GCGC 1 cut(s) 759
GluI GCNGC 7 cut(s) 34, 302, 384, 892, 1071, 1119, 1203
HaeII RGCGCY 1 cut(s) 761
HaeIII GGCC 1 cut(s) 467
HapII CCGG 3 cut(s) 71, 104, 119
HgaI GACGC 3 cut(s) 51, 125, 142
HhaI GCGC 1 cut(s) 760
Hin1II CATG 9 cut(s) 29, 357, 400, 865, 890, 1267, 1357, 1415, 1513
Hin6I GCGC 1 cut(s) 758
HinP1I GCGC 1 cut(s) 758
HindIII AAGCTT 4 cut(s) 41, 89, 169, 1271
HpaII CCGG 3 cut(s) 71, 104, 119
HphI GGTGA 4 cut(s) 85, 412, 1088, 1277
Hpy166II GTNNAC 3 cut(s) 183, 768, 1556
Hpy188I TCNGA 9 cut(s) 16, 255, 536, 545, 729, 970, 1002, 1182, 1329
Hpy188III TCNNGA 9 cut(s) 440, 592, 632, 719, 815, 832, 1138, 1412, 1496
Hpy8I GTNNAC 3 cut(s) 183, 768, 1556
Hpy99I CGWCG 3 cut(s) 52, 103, 118
HpyAV CCTTC 2 cut(s) 1135, 1274
HpyCH4III ACNGT 5 cut(s) 159, 406, 924, 1289, 1447
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 363, 905, 1438
Hsp92II CATG 9 cut(s) 29, 357, 400, 865, 890, 1267, 1357, 1415, 1513
HspAI GCGC 1 cut(s) 758
KroI GCCGGC 2 cut(s) 103, 118
KroNI GCCGGC 2 cut(s) 105, 120
Kzo9I GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
LmnI GCTCC 1 cut(s) 913
Lsp1109I GCAGC 6 cut(s) 20, 370, 878, 1082, 1105, 1189
LweI GCATC 3 cut(s) 585, 850, 1323
MaeI CTAG 3 cut(s) 474, 1322, 1560
MaeIII GTNAC 6 cut(s) 392, 400, 791, 832, 1283, 1544
MalI GATC 6 cut(s) 13, 471, 723, 1061, 1326, 1405
MbiI CCGCTC 1 cut(s) 281
MboI GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
MboII GAAGA 8 cut(s) 299, 558, 716, 914, 983, 988, 1142, 1431
MfeI CAATTG 1 cut(s) 706
MflI RGATCY 3 cut(s) 11, 1059, 1403
MhlI GDGCHC 2 cut(s) 167, 918
MluI ACGCGT 1 cut(s) 134
MlyI GAGTC 3 cut(s) 232, 791, 1363
MmeI TCCRAC 1 cut(s) 264
Mph1103I ATGCAT 2 cut(s) 937, 1359
MreI CGCCGGCG 2 cut(s) 103, 118
MroNI GCCGGC 2 cut(s) 103, 118
MroXI GAANNNNTTC 2 cut(s) 639, 1149
MslI CAYNNNNRTG 1 cut(s) 1362
MspA1I CMGCKG 3 cut(s) 33, 899, 1073
MspCI CTTAAG 1 cut(s) 1549
MspI CCGG 3 cut(s) 71, 104, 119
MspR9I CCNGG 1 cut(s) 755
MunI CAATTG 1 cut(s) 706
MvaI CCWGG 1 cut(s) 755
MvnI CGCG 2 cut(s) 136, 744
MwoI GCNNNNNNNGC 4 cut(s) 49, 363, 905, 1438
NaeI GCCGGC 2 cut(s) 105, 120
NdeII GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
NgoMIV GCCGGC 2 cut(s) 103, 118
NlaIII CATG 9 cut(s) 29, 357, 400, 865, 890, 1267, 1357, 1415, 1513
NlaIV GGNNCC 1 cut(s) 825
NmeAIII GCCGAG 3 cut(s) 78, 391, 934
NmuCI GTSAC 4 cut(s) 392, 400, 832, 1283
NsiI ATGCAT 2 cut(s) 937, 1359
NspI RCATGY 2 cut(s) 865, 1357
PaeR7I CTCGAG 1 cut(s) 590
PagI TCATGA 1 cut(s) 1411
PaqCI CACCTGC 1 cut(s) 133
PdiI GCCGGC 2 cut(s) 105, 120
PdmI GAANNNNTTC 2 cut(s) 639, 1149
PfeI GAWTC 7 cut(s) 76, 109, 274, 370, 515, 640, 1183
PflFI GACNNNGTC 1 cut(s) 530
PkrI GCNGC 7 cut(s) 35, 303, 385, 893, 1072, 1120, 1204
PleI GAGTC 3 cut(s) 231, 790, 1363
PpsI GAGTC 3 cut(s) 231, 790, 1363
PpuMI RGGWCCY 1 cut(s) 824
PshBI ATTAAT 1 cut(s) 1022
Psp124BI GAGCTC 1 cut(s) 918
Psp5II RGGWCCY 1 cut(s) 824
Psp6I CCWGG 1 cut(s) 753
PspEI GGTNACC 1 cut(s) 1283
PspGI CCWGG 1 cut(s) 753
PspN4I GGNNCC 1 cut(s) 825
PspPI GGNCC 2 cut(s) 465, 824
PspPPI RGGWCCY 1 cut(s) 824
PsrI GAACNNNNNNTAC 2 cut(s) 1392, 1424
PstI CTGCAG 1 cut(s) 144
PstNI CAGNNNCTG 2 cut(s) 643, 760
PsuI RGATCY 3 cut(s) 11, 1059, 1403
PsyI GACNNNGTC 1 cut(s) 530
PvuII CAGCTG 2 cut(s) 899, 1073
RsaI GTAC 1 cut(s) 883
RsaNI GTAC 1 cut(s) 882
RseI CAYNNNNRTG 1 cut(s) 1362
SacI GAGCTC 1 cut(s) 918
SatI GCNGC 7 cut(s) 34, 302, 384, 892, 1071, 1119, 1203
Sau3AI GATC 6 cut(s) 11, 469, 721, 1059, 1324, 1403
Sau96I GGNCC 2 cut(s) 465, 824
SchI GAGTC 3 cut(s) 232, 791, 1363
ScrFI CCNGG 1 cut(s) 755
SduI GDGCHC 2 cut(s) 167, 918
SfaNI GCATC 3 cut(s) 585, 850, 1323
SfcI CTRYAG 1 cut(s) 140
Sfr274I CTCGAG 1 cut(s) 590
SgrAI CRCCGGYG 3 cut(s) 70, 103, 118
SinI GGWCC 1 cut(s) 824
SlaI CTCGAG 1 cut(s) 590
SmiI ATTTAAAT 1 cut(s) 1362
SmiMI CAYNNNNRTG 1 cut(s) 1362
SmlI CTYRAG 4 cut(s) 166, 590, 984, 1549
SmoI CTYRAG 4 cut(s) 166, 590, 984, 1549
SsiI CCGC 9 cut(s) 31, 95, 206, 227, 279, 299, 302, 1109, 1223
SspMI CTAG 3 cut(s) 474, 1322, 1560
SstI GAGCTC 1 cut(s) 918
StyD4I CCNGG 1 cut(s) 753
StyI CCWWGG 2 cut(s) 941, 1559
SwaI ATTTAAAT 1 cut(s) 1362
TaaI ACNGT 5 cut(s) 159, 406, 924, 1289, 1447
TaqI TCGA 3 cut(s) 591, 633, 1341
TatI WGTACW 1 cut(s) 881
TauI GCSGC 1 cut(s) 304
TfiI GAWTC 7 cut(s) 76, 109, 274, 370, 515, 640, 1183
TscAI CASTG 1 cut(s) 525
TseFI GTSAC 4 cut(s) 392, 400, 832, 1283
TseI GCWGC 6 cut(s) 33, 383, 891, 1070, 1118, 1202
Tsp45I GTSAC 4 cut(s) 392, 400, 832, 1283
TspDTI ATGAA 6 cut(s) 142, 342, 499, 633, 1179, 1400
TspGWI ACGGA 3 cut(s) 36, 102, 1396
TspRI CASTG 1 cut(s) 525
Tth111I GACNNNGTC 1 cut(s) 530
Vha464I CTTAAG 1 cut(s) 1549
VpaK11BI GGWCC 1 cut(s) 824
VspI ATTAAT 1 cut(s) 1022
XceI RCATGY 2 cut(s) 865, 1357
XhoI CTCGAG 1 cut(s) 590
XmaJI CCTAGG 1 cut(s) 1559
XmnI GAANNNNTTC 2 cut(s) 639, 1149
XspI CTAG 3 cut(s) 474, 1322, 1560
Zsp2I ATGCAT 2 cut(s) 937, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.