Rroxscaffold_5G00384500

Equilibrative nucleotide transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014468
Physical Location & Seq
Reverse (-)
63863060 .. 63865415
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00384500.1

Sequence Viewer

Length: 1608 bp
ATGAGCCACGACAAGTGGTTCAATAGATGCACTGGATCCCCTCACGAGAACGTTAAAGATGTGAAACTCTCACATTCTGTTCGAATGCTGGGTTTGCTTAGTATAACGGATGGGAAAGCCGATCTACATTATGTATCAATACGAGACTCAATTATTGGCTCAACAGCCACAAAACGACACCGCTTCCCTGTTTGCCCACTCCCATCAAGACTTCCATCACCAGAATATCTTCATCAAAATCTCAACAGAAACCAAACCCAAGATTCAAGCCTTCACCTTTTCCGGCTGATTCTCATCCAACGTAGAAACCCATTGAGAAACTTTGACCCAATTCCCGATGGGTTTCGCCGCCAAAACCCCCGAGGAAAACTCCGAATCGAGTCTCCTCCTCCCCACCACCACCCCCAGCCCCGACGGCGCCGCCGCACCAGTAAAGTCCCAAACGACCCTTTCCATCTGACCTACATCATCTACTTCACTCTGGGCCTCGGATACCTCCTCCCATGGAACGCTTTCATCACAGCCGTTGATTACTTCACCTACCTCTACCCCGACGCCAGCGTCGACCGTATATTCTCCGTCGCGTACATGCTCGTCGGCCTCGTCGTCCTTCTGATCATCGTCTTCTACGCCCAGAAGTCCGACGCCTACGTCCGGATCAACGTCGGCCTCGCCCTGTTTGTGGTGTCGCTGCTCATCGTGCCGGTGCTGGACTTGGTCTACATCCAGGGCCGGGTCGGGTTGTACGCCGGGTTTTACGTCACGGTTGCTGCGGTTGCGCTTTCGGGTTTGGCTGATGCTTTGGTACAAGGCTCGCTGATCGGCGCGGCGGGTGAGTTGCCTGAGAAGTATATGCAGGCCATTGTGGCGGGCACTGCTGGTTCAGGAGTGCTTGTTTCGTTTTTGAGAATCCTAACGAAGGCTGTATATCCGCAAACTGGCGAGGGACTGAGGAAAAGTGCAAATCTCTACTTTGCTGTGGGGATAGTAGTTATGGTCATATGCATTGTTTTCTACAATGTGGCACCGAGGATTCCGGTTATGAAGTACTATGCAGAGTTGAAGATTCAGACTATAAATGAGGAGAAAGAATTGAAAGCGGGGTCTGTGTTGAGATCGACTCTATGGGGTGTAGTTGGGAGTGTCAAGTGGTATGGTATCGGCATTCTGCTTATCTACATTGTGACTTTGGCAATATTTCCAGGGTATATTACCGAAGATGTGCACTCTGATCTTCTCAAGGATTGGTACGCGGTCATCCTTATTACTGGTTACAATGTGTTTGATCTGGTTGGCAAGGCTCTGACTTCAGTATATCTCCTTGAAAATTCCAAGGTTGCAATCGGCGGCACGGTTGCCAGATTGCTATTCTTTCCTCTGTTCTATGGGTGCTTGCACGGCCCGGCATTCTTCAGAACAGAGATTCCGGTGACAATACTGACTTGCCTTTTGGGCCTTACTAATGGCTACTTGACGAGTGTGTTGATGATTTTGGCTCCCAAAGTTGTCCAATTACAACATGCCGAGACTGCAGGGATTGTGATTGTCTTGTTCTTGGTTGTGGGTTTGGCTGCCGGTTCACTTGTATCTTGGTTTTGGGTCATCTGA

Protein Analysis

535

Amino Acids

59.53

Weight (kDa)

9.48

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoside_tran PF01733 257 - 535 3.1e-75 Nucleoside transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014468)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G70330
fragaria_vesca FvH4_4g34590
malus_domestica MD13G1091100.v1.1 MD16G1091600.v1.1
prunus_persica Prupe.1G254800_v2.0.a1
pyrus_communis pycom13g07930 pycom16g07820
rosa_chinensis RchiOBHm_Chr4g0443961
rosa_laevigata RLG00000005873
rosa_multiflora Rmu_sc0011390.1_g000001
rosa_roxburghii Rroxscaffold_5G00384500
rosa_rugosa Rorug04G0348500
rosa_samantha Rh4AG409200 Rh4BG420300 Rh4CG434300 Rh4DG415300
rosa_wichuraiana Rw4G035150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 560, 650
AccB1I GGYRCC 2 cut(s) 417, 1024
AccI GTMKAC 2 cut(s) 564, 720
AccII CGCG 3 cut(s) 584, 827, 1253
AccIII TCCGGA 1 cut(s) 654
AclI AACGTT 1 cut(s) 51
AclWI GGATC 3 cut(s) 30, 43, 665
AcsI RAATTY 1 cut(s) 1327
AcuI CTGAAG 2 cut(s) 1293, 1396
AcyI GRCGYC 3 cut(s) 418, 555, 645
AfaI GTAC 5 cut(s) 587, 746, 807, 1049, 1250
AfiI CCNNNNNNNGG 5 cut(s) 654, 682, 733, 919, 938
AgsI TTSAA 5 cut(s) 22, 267, 1063, 1096, 1325
AjnI CCWGG 2 cut(s) 726, 1201
AloI GAACNNNNNNTCC 2 cut(s) 1408, 1440
Alw21I GWGCWC 1 cut(s) 1227
Alw26I GTCTC 3 cut(s) 138, 387, 1520
Alw44I GTGCAC 1 cut(s) 1223
AlwI GGATC 3 cut(s) 30, 43, 665
Ama87I CYCGRG 1 cut(s) 360
Aor13HI TCCGGA 1 cut(s) 654
AoxI GGCC 7 cut(s) 484, 598, 667, 730, 858, 1399, 1453
ApaLI GTGCAC 1 cut(s) 1223
ApeKI GCWGC 3 cut(s) 691, 770, 1571
ApoI RAATTY 1 cut(s) 1327
ArsI GACNNNNNNTTYG 2 cut(s) 1432, 1464
Asp700I GAANNNNTTC 2 cut(s) 228, 512
AspLEI GCGC 3 cut(s) 420, 781, 827
AspS9I GGNCC 4 cut(s) 484, 730, 1400, 1453
AsuC2I CCSGG 3 cut(s) 734, 751, 1403
AsuHPI GGTGA 5 cut(s) 210, 266, 529, 845, 1441
AsuII TTCGAA 1 cut(s) 82
AvaI CYCGRG 1 cut(s) 360
BaeGI GKGCMC 2 cut(s) 875, 1227
BamHI GGATCC 1 cut(s) 35
BanI GGYRCC 2 cut(s) 417, 1024
BauI CACGAG 1 cut(s) 44
BbsI GAAGAC 1 cut(s) 616
Bbv12I GWGCWC 1 cut(s) 1227
BbvI GCAGC 3 cut(s) 678, 757, 1558
BccI CCATC 5 cut(s) 104, 211, 223, 332, 462
BceAI ACGGC 3 cut(s) 431, 509, 1414
BciT130I CCWGG 2 cut(s) 728, 1203
BciVI GTATCC 1 cut(s) 485
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 3 cut(s) 734, 751, 1403
BcoDI GTCTC 3 cut(s) 138, 387, 1520
BfmI CTRYAG 1 cut(s) 1530
BfoI RGCGCY 1 cut(s) 421
BfuI GTATCC 1 cut(s) 485
BglI GCCNNNNNGGC 3 cut(s) 415, 866, 1452
BisI GCNGC 8 cut(s) 349, 421, 424, 692, 771, 828, 1348, 1572
BlsI GCNGC 8 cut(s) 350, 422, 425, 693, 772, 829, 1349, 1573
BmcAI AGTACT 1 cut(s) 1049
Bme1390I CCNGG 5 cut(s) 728, 734, 751, 1203, 1403
BmeT110I CYCGRG 1 cut(s) 360
BmgT120I GGNCC 4 cut(s) 484, 730, 1400, 1453
BmiI GGNNCC 4 cut(s) 37, 419, 1026, 1497
BmrFI CCNGG 5 cut(s) 728, 734, 751, 1203, 1403
BmsI GCATC 2 cut(s) 17, 787
BpiI GAAGAC 1 cut(s) 616
BplI GAGNNNNNCTC 4 cut(s) 354, 386, 1105, 1137
Bpu14I TTCGAA 1 cut(s) 82
BpuEI CTTGAG 1 cut(s) 1223
BpuMI CCSGG 3 cut(s) 734, 751, 1403
BsaBI GATNNNNATC 1 cut(s) 293
BsaHI GRCGYC 3 cut(s) 418, 555, 645
BsaJI CCNNGG 7 cut(s) 361, 487, 503, 727, 1028, 1202, 1332
BsaWI WCCGGW 3 cut(s) 654, 1036, 1426
BsaXI ACNNNNNCTCC 2 cut(s) 879, 909
Bsc4I CCNNNNNNNGG 5 cut(s) 654, 682, 733, 919, 938
Bse118I RCCGGY 2 cut(s) 703, 1574
Bse1I ACTGG 4 cut(s) 37, 429, 943, 1273
Bse8I GATNNNNATC 1 cut(s) 293
BseAI TCCGGA 1 cut(s) 654
BseBI CCWGG 2 cut(s) 728, 1203
BseDI CCNNGG 7 cut(s) 361, 487, 503, 727, 1028, 1202, 1332
BseGI GGATG 4 cut(s) 115, 294, 723, 1257
BseJI GATNNNNATC 1 cut(s) 293
BseLI CCNNNNNNNGG 5 cut(s) 654, 682, 733, 919, 938
BseMII CTCAG 2 cut(s) 834, 941
BseNI ACTGG 4 cut(s) 37, 429, 943, 1273
BseRI GAGGAG 4 cut(s) 375, 378, 488, 1097
BseSI GKGCMC 2 cut(s) 875, 1227
BseXI GCAGC 3 cut(s) 678, 757, 1558
BseYI CCCAGC 2 cut(s) 88, 405
Bsh1236I CGCG 3 cut(s) 584, 827, 1253
Bsh1285I CGRYCG 1 cut(s) 568
BshFI GGCC 7 cut(s) 486, 600, 669, 732, 860, 1401, 1455
BshNI GGYRCC 2 cut(s) 417, 1024
BsiEI CGRYCG 1 cut(s) 568
BsiHKAI GWGCWC 1 cut(s) 1227
BsiHKCI CYCGRG 1 cut(s) 360
BsiSI CCGG 9 cut(s) 283, 655, 704, 733, 750, 1037, 1403, 1427, 1575
BslFI GGGAC 2 cut(s) 422, 960
BslI CCNNNNNNNGG 5 cut(s) 654, 682, 733, 919, 938
BsmAI GTCTC 3 cut(s) 138, 387, 1520
BsmFI GGGAC 2 cut(s) 422, 960
BsmI GAATGC 3 cut(s) 90, 1164, 1406
BsnI GGCC 7 cut(s) 486, 600, 669, 732, 860, 1401, 1455
BsoBI CYCGRG 1 cut(s) 360
Bsp119I TTCGAA 1 cut(s) 82
Bsp1286I GDGCHC 2 cut(s) 875, 1227
Bsp13I TCCGGA 1 cut(s) 654
Bsp143I GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
Bsp19I CCATGG 1 cut(s) 503
BspANI GGCC 7 cut(s) 486, 600, 669, 732, 860, 1401, 1455
BspCNI CTCAG 2 cut(s) 835, 942
BspEI TCCGGA 1 cut(s) 654
BspFNI CGCG 3 cut(s) 584, 827, 1253
BspLI GGNNCC 4 cut(s) 37, 419, 1026, 1497
BspMAI CTGCAG 1 cut(s) 1534
BspPI GGATC 3 cut(s) 30, 43, 665
BspT104I TTCGAA 1 cut(s) 82
BspT107I GGYRCC 2 cut(s) 417, 1024
BsrFI RCCGGY 2 cut(s) 703, 1574
BsrI ACTGG 4 cut(s) 37, 429, 943, 1273
BssAI RCCGGY 2 cut(s) 703, 1574
BssECI CCNNGG 7 cut(s) 361, 487, 503, 727, 1028, 1202, 1332
BssMI GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
BssNI GRCGYC 3 cut(s) 418, 555, 645
BssSI CACGAG 1 cut(s) 44
BssT1I CCWWGG 2 cut(s) 503, 1332
Bst2BI CACGAG 1 cut(s) 44
Bst2UI CCWGG 2 cut(s) 728, 1203
Bst4CI ACNGT 3 cut(s) 569, 766, 1354
BstACI GRCGYC 3 cut(s) 418, 555, 645
BstBI TTCGAA 1 cut(s) 82
BstC8I GCNNGC 5 cut(s) 559, 815, 858, 871, 1394
BstDEI CTNAG 3 cut(s) 98, 843, 950
BstDSI CCRYGG 1 cut(s) 503
BstENI CCTNNNNNAGG 1 cut(s) 917
BstF5I GGATG 4 cut(s) 115, 294, 723, 1257
BstFNI CGCG 3 cut(s) 584, 827, 1253
BstH2I RGCGCY 1 cut(s) 421
BstHHI GCGC 3 cut(s) 420, 781, 827
BstKTI GATC 8 cut(s) 38, 124, 618, 660, 822, 1118, 1234, 1288
BstMAI GTCTC 3 cut(s) 138, 387, 1520
BstMBI GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
BstMCI CGRYCG 1 cut(s) 568
BstMWI GCNNNNNNNGC 9 cut(s) 94, 415, 700, 776, 866, 875, 1398, 1452, 1529
BstNI CCWGG 2 cut(s) 728, 1203
BstNSI RCATGY 2 cut(s) 592, 1523
BstSCI CCNGG 5 cut(s) 726, 732, 749, 1201, 1401
BstSFI CTRYAG 1 cut(s) 1530
BstSLI GKGCMC 2 cut(s) 875, 1227
BstUI CGCG 3 cut(s) 584, 827, 1253
BstV1I GCAGC 3 cut(s) 678, 757, 1558
BstV2I GAAGAC 1 cut(s) 616
BstX2I RGATCY 1 cut(s) 35
BstYI RGATCY 1 cut(s) 35
BsuI GTATCC 1 cut(s) 485
BsuRI GGCC 7 cut(s) 486, 600, 669, 732, 860, 1401, 1455
BtgI CCRYGG 1 cut(s) 503
BtsCI GGATG 4 cut(s) 115, 294, 723, 1257
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 2 cut(s) 30, 873
Cac8I GCNNGC 5 cut(s) 559, 815, 858, 871, 1394
CfoI GCGC 3 cut(s) 420, 781, 827
Cfr10I RCCGGY 2 cut(s) 703, 1574
Cfr13I GGNCC 4 cut(s) 484, 730, 1400, 1453
CseI GACGC 3 cut(s) 550, 563, 653
Csp6I GTAC 5 cut(s) 586, 745, 806, 1048, 1249
CviAII CATG 3 cut(s) 504, 589, 1520
CviQI GTAC 5 cut(s) 586, 745, 806, 1048, 1249
DdeI CTNAG 3 cut(s) 98, 843, 950
DinI GGCGCC 1 cut(s) 419
DpnI GATC 8 cut(s) 37, 123, 617, 659, 821, 1117, 1233, 1287
DpnII GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
DrdI GACNNNNNNGTC 2 cut(s) 560, 650
DseDI GACNNNNNNGTC 2 cut(s) 560, 650
Eco130I CCWWGG 2 cut(s) 503, 1332
Eco57I CTGAAG 2 cut(s) 1293, 1396
Eco88I CYCGRG 1 cut(s) 360
EcoNI CCTNNNNNAGG 1 cut(s) 917
EcoRII CCWGG 2 cut(s) 726, 1201
EcoT14I CCWWGG 2 cut(s) 503, 1332
EcoT22I ATGCAT 1 cut(s) 1007
EgeI GGCGCC 1 cut(s) 419
EheI GGCGCC 1 cut(s) 419
ErhI CCWWGG 2 cut(s) 503, 1332
FaeI CATG 3 cut(s) 507, 592, 1523
FaqI GGGAC 2 cut(s) 422, 960
FatI CATG 3 cut(s) 503, 588, 1519
FauI CCCGC 3 cut(s) 823, 862, 1093
FauNDI CATATG 1 cut(s) 1001
FbaI TGATCA 1 cut(s) 615
FblI GTMKAC 2 cut(s) 564, 720
Fnu4HI GCNGC 8 cut(s) 349, 421, 424, 692, 771, 828, 1348, 1572
FokI GGATG 4 cut(s) 122, 281, 710, 1244
Fsp4HI GCNGC 8 cut(s) 349, 421, 424, 692, 771, 828, 1348, 1572
GlaI GCGC 3 cut(s) 419, 780, 826
GluI GCNGC 8 cut(s) 349, 421, 424, 692, 771, 828, 1348, 1572
GsaI CCCAGC 2 cut(s) 92, 409
HaeII RGCGCY 1 cut(s) 421
HaeIII GGCC 7 cut(s) 486, 600, 669, 732, 860, 1401, 1455
HapII CCGG 9 cut(s) 283, 655, 704, 733, 750, 1037, 1403, 1427, 1575
HgaI GACGC 3 cut(s) 550, 563, 653
HhaI GCGC 3 cut(s) 420, 781, 827
Hin1I GRCGYC 3 cut(s) 418, 555, 645
Hin1II CATG 3 cut(s) 507, 592, 1523
Hin6I GCGC 3 cut(s) 418, 779, 825
HinP1I GCGC 3 cut(s) 418, 779, 825
HincII GTYRAC 1 cut(s) 565
HindII GTYRAC 1 cut(s) 565
HpaII CCGG 9 cut(s) 283, 655, 704, 733, 750, 1037, 1403, 1427, 1575
HphI GGTGA 5 cut(s) 210, 266, 529, 845, 1441
Hpy166II GTNNAC 4 cut(s) 565, 721, 1225, 1580
Hpy188III TCNNGA 5 cut(s) 44, 207, 335, 655, 885
Hpy8I GTNNAC 4 cut(s) 565, 721, 1225, 1580
Hpy99I CGWCG 8 cut(s) 417, 557, 566, 584, 599, 608, 647, 668
HpyAV CCTTC 3 cut(s) 281, 620, 913
HpyCH4III ACNGT 3 cut(s) 569, 766, 1354
HpyCH4IV ACGT 5 cut(s) 51, 301, 651, 663, 759
HpyCH4V TGCA 9 cut(s) 30, 856, 962, 1005, 1055, 1225, 1340, 1396, 1532
HpyF10VI GCNNNNNNNGC 9 cut(s) 94, 415, 700, 776, 866, 875, 1398, 1452, 1529
HpyF3I CTNAG 3 cut(s) 98, 843, 950
HpySE526I ACGT 5 cut(s) 51, 301, 651, 663, 759
Hsp92I GRCGYC 3 cut(s) 418, 555, 645
Hsp92II CATG 3 cut(s) 507, 592, 1523
HspAI GCGC 3 cut(s) 418, 779, 825
KasI GGCGCC 1 cut(s) 417
Kpn2I TCCGGA 1 cut(s) 654
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
LmnI GCTCC 1 cut(s) 1501
Lsp1109I GCAGC 3 cut(s) 678, 757, 1558
LweI GCATC 2 cut(s) 17, 787
MaeII ACGT 5 cut(s) 51, 301, 651, 663, 759
MaeIII GTNAC 4 cut(s) 760, 1183, 1271, 1429
MalI GATC 8 cut(s) 37, 123, 617, 659, 821, 1117, 1233, 1287
MboI GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
MboII GAAGA 6 cut(s) 221, 616, 1075, 1226, 1229, 1402
MflI RGATCY 1 cut(s) 35
MhlI GDGCHC 2 cut(s) 875, 1227
MluCI AATT 5 cut(s) 150, 330, 1091, 1327, 1511
Mly113I GGCGCC 1 cut(s) 418
MlyI GAGTC 3 cut(s) 140, 389, 1114
MmeI TCCRAC 2 cut(s) 322, 666
Mph1103I ATGCAT 1 cut(s) 1007
MroI TCCGGA 1 cut(s) 654
MroXI GAANNNNTTC 2 cut(s) 228, 512
MseI TTAA 1 cut(s) 54
MspI CCGG 9 cut(s) 283, 655, 704, 733, 750, 1037, 1403, 1427, 1575
MspR9I CCNGG 5 cut(s) 728, 734, 751, 1203, 1403
Mva1269I GAATGC 3 cut(s) 90, 1164, 1406
MvaI CCWGG 2 cut(s) 728, 1203
MvnI CGCG 3 cut(s) 584, 827, 1253
MwoI GCNNNNNNNGC 9 cut(s) 94, 415, 700, 776, 866, 875, 1398, 1452, 1529
NarI GGCGCC 1 cut(s) 418
NciI CCSGG 3 cut(s) 734, 751, 1403
NcoI CCATGG 1 cut(s) 503
NdeI CATATG 1 cut(s) 1001
NdeII GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
NlaIII CATG 3 cut(s) 507, 592, 1523
NlaIV GGNNCC 4 cut(s) 37, 419, 1026, 1497
NmeAIII GCCGAG 1 cut(s) 1549
NmuCI GTSAC 3 cut(s) 760, 1183, 1429
NsiI ATGCAT 1 cut(s) 1007
NspI RCATGY 2 cut(s) 592, 1523
NspV TTCGAA 1 cut(s) 82
PcsI WCGNNNNNNNCGW 3 cut(s) 561, 600, 603
PctI GAATGC 3 cut(s) 90, 1164, 1406
PdmI GAANNNNTTC 2 cut(s) 228, 512
PfeI GAWTC 7 cut(s) 263, 289, 375, 909, 1033, 1066, 1423
PflFI GACNNNGTC 1 cut(s) 716
PkrI GCNGC 8 cut(s) 350, 422, 425, 693, 772, 829, 1349, 1573
PleI GAGTC 3 cut(s) 140, 388, 1114
PluTI GGCGCC 1 cut(s) 421
PpsI GAGTC 3 cut(s) 140, 388, 1114
Psp1406I AACGTT 1 cut(s) 51
Psp6I CCWGG 2 cut(s) 726, 1201
PspFI CCCAGC 2 cut(s) 88, 405
PspGI CCWGG 2 cut(s) 726, 1201
PspN4I GGNNCC 4 cut(s) 37, 419, 1026, 1497
PspPI GGNCC 4 cut(s) 484, 730, 1400, 1453
PstI CTGCAG 1 cut(s) 1534
PsuI RGATCY 1 cut(s) 35
PsyI GACNNNGTC 1 cut(s) 716
RsaI GTAC 5 cut(s) 587, 746, 807, 1049, 1250
RsaNI GTAC 5 cut(s) 586, 745, 806, 1048, 1249
SalI GTCGAC 1 cut(s) 563
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 8 cut(s) 349, 421, 424, 692, 771, 828, 1348, 1572
Sau3AI GATC 8 cut(s) 35, 121, 615, 657, 819, 1115, 1231, 1285
Sau96I GGNCC 4 cut(s) 484, 730, 1400, 1453
ScaI AGTACT 1 cut(s) 1049
SchI GAGTC 3 cut(s) 140, 389, 1114
ScrFI CCNGG 5 cut(s) 728, 734, 751, 1203, 1403
SduI GDGCHC 2 cut(s) 875, 1227
SfaNI GCATC 2 cut(s) 17, 787
SfcI CTRYAG 1 cut(s) 1530
SfoI GGCGCC 1 cut(s) 419
SfuI TTCGAA 1 cut(s) 82
SmlI CTYRAG 1 cut(s) 1238
SmoI CTYRAG 1 cut(s) 1238
Sse9I AATT 5 cut(s) 150, 330, 1091, 1327, 1511
SspDI GGCGCC 1 cut(s) 417
SspI AATATT 1 cut(s) 1197
StyD4I CCNGG 5 cut(s) 726, 732, 749, 1201, 1401
StyI CCWWGG 2 cut(s) 503, 1332
TaaI ACNGT 3 cut(s) 569, 766, 1354
TaiI ACGT 5 cut(s) 54, 304, 654, 666, 762
TaqI TCGA 4 cut(s) 82, 378, 564, 1118
TasI AATT 5 cut(s) 150, 330, 1091, 1327, 1511
TatI WGTACW 1 cut(s) 1047
TauI GCSGC 5 cut(s) 351, 423, 426, 830, 1350
TfiI GAWTC 7 cut(s) 263, 289, 375, 909, 1033, 1066, 1423
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TscAI CASTG 2 cut(s) 37, 880
TseFI GTSAC 3 cut(s) 760, 1183, 1429
TseI GCWGC 3 cut(s) 691, 770, 1571
Tsp45I GTSAC 3 cut(s) 760, 1183, 1429
TspDTI ATGAA 3 cut(s) 221, 505, 1058
TspGWI ACGGA 2 cut(s) 122, 568
TspRI CASTG 2 cut(s) 37, 880
Tth111I GACNNNGTC 1 cut(s) 716
VneI GTGCAC 1 cut(s) 1223
XagI CCTNNNNNAGG 1 cut(s) 917
XapI RAATTY 1 cut(s) 1327
XceI RCATGY 2 cut(s) 592, 1523
XmiI GTMKAC 2 cut(s) 564, 720
XmnI GAANNNNTTC 2 cut(s) 228, 512
ZrmI AGTACT 1 cut(s) 1049
Zsp2I ATGCAT 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.