Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0012762

Physical Location & Seq

Genomic Coordinates Reverse (-)

11838149 .. 11842740

Gene Structure 4592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00392320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGCAAACCAAGTTGTTTTCTAACTTTGTGCAATATTTTGTAGAAAACACAAACCCAACACTGGTGTGTTTTTCAATCATGGAGAAGAAGAAACCCCAACATGTTGGGTACTACTACAAGCTCTTGGCTTTTGTGGTTGCTGGGTTTTCTTCCCTGTTGCTCTGTGCCAACTCTCAACCAAGCGCAAGCAACGATGCTGCAGTAATGCTAGCCCTCAAGAAGAGCCTCAACCCGTCTAGTTCATTCGGATGGTCCGACCCGGACCCGTGCAAGTGGAGCTACGTAGGCTGCTCAGATGACAAAAGGGTGACCCGGATCCAGATTGGTCACCAAAACCTTCAAGGTACGCTCCCTACAAGCCTCCAAAACCTCACTCAGCTAGAGCGATTAGAGGTTCAGTGGAACAAGATTTCGGGGCCTCTTCCAAGCCTAAGTGGGTTGGGCTTGTTACAAGTGTTGTTACTTGGTAACAACTTGTTTACTTCAATTCCTAGTGATTTCTTTGCTGGCATGACTTCACTTCAGTCTGTTGAGATTGACAACAACCCATTTACGGCTTGGGAAATCCCCCAAACCCTCCAGAACGCATCATCACTTCAAAATTTCTCAGCCAATTCTGCCAACATTACCGGAAAGATACCGGATTTTTTCAACGCCGATGCGTTTCCCGGGCTGGTTAACTTGCACTTGGCTTTCAATTACCTGGAGGGCCAGTTGCCGGAGAGCTTTTCGGGGTCAGAAATGCAGTCTCTTTGGCTTAATGGGCAGCAAAGTGTAGGTAAGCTTGTTGGCAGCATTGATGTTTTACGCAACATGACTACGCTGACTGAGGTTTGGTTGCATTCAAATGGGTTTTCGGGCCCGTTGCCCGACTTTTCGGGGTTGACAGATTTGAGGAGCTTAAGTTTAAGAGATAATTTGTTCACCGGACCTGTTCCGGTGTCATTGTTGAACCTCAAGTCATTAGAGTCTGTGAATTTGACAAACAACTTGCTCCAAGGACCAATGCCAGATTTTCCCAAGGGGGTTTCAGTAGATATGACTAAGGATTCAAATAACTTTTGCCTGCCAAGTCCTGGCCCATGCGATCCTCGAGTGGATACTTTGCTTTTGATTGTTAGCTCAATGTCTTATCCTCAAAAGTTTGCAGAGAATTGGAAGGGGAATGATCCCTGTGCAGATTGGATCGGAGTCACTTGTAGAAATGGCAACATTACAGTCATCAATTTTCAGAAAATGGGTCTCACTGGAACCATTTCTCCGGCTTTTGCCTCACTTAAGTCGCTCCAAAGACTGGTTCTTGCTGATAACAATTTGACAGGATCTATTCCAGAGGAGCTAGCCACTCTGCCTGCACTTACTCAATTAGATGTGTCAAACAATCTGCTTTATGGCAAAATCCCATCTTTTACCAAGGCTAATGTGATTGTAACCACTGATGGCAACCCTGATATAGGGAAGGAAAAGAGTACCAATGGGCCGTCTCAGAATTCAACTAACCCTTCTACAAGTATTTCTGGAAATGGTAACAGTTCTGCACCTCATGGGAAGAAATCTTCAAATTTAGTAGGAGTTATTTTGTTCTCTGTTATCGGTGGTGTGTTTGTGATGTTCTTAATTGCACTGTTGGTCATCTGTTTGTATAGAACAAAACAAAAGCGATTGACCAGAGTTCAGAGCCCAAATGCAATGGTGATCCATCCTCGCCATTCTGGATCTGATAATGAGAGCATGAAGATAACAGTTGCAGGCTCTAGTGTTAGCGTTGGTGCAATTAGTGAAGCTCACACTCTTCCTAGTAGTGAGCCAAGCGACATCCAAATGGTTGAAGCAGGAAACATGGTGATATCTATTCAAGTGCTACGGAGTGTGACCAACAATTTCAGTGAAGAAAATATATTGGGAAGAGGAGGCTTCGGGACAGTGTATAAAGGAGAACTGCATGATGGAACAAAGATTGCTGTTAAGAGAATGGAGGCTGGGGTAATAGCCGGAAAGGGGCTTGCAGAATTTAAGTCTGAGATTGCAGTTTTGACCAAGGTTCGGCACAGGCATCTAGTTGCTCTTCTGGGGTATTGTTTGGATGGCAATGAAAGGCTTCTTGTATATGAGTATATGCCTCAAGGGACACTCAGTAGGTTCATCTTCAACTGGCCTGAAGAAGGACTGAAGCCACTTGAATGGACAAAAAGGTTGACCATTGCGTTAGATGTAGCAAGGGGAGTTGAGTATCTTCATGGTTTAGCCCATCAGAGTTTTATACATAGAGACCTAAAGCCTTCAAACATTCTCCTTGGAGATGATATGAGGGCTAAGGTTGCAGATTTTGGTCTTGTGCGGCTTGCTCCAGAGGGTAAAGGTTCAATTGAAACAAGAATTGCAGGGACTTTTGGATACTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACAACTAAAGTAGATGTATTCAGCTTCGGGGTGATTTTGATGGAGCTAATCACAGGGAGAAAAGCACTTGACGAGAGCCAGCCTGAGGAGAGCATGCACCTTGTCACATGGTTTCGAAGGATTTTTATTAATAAGGACTCATTCCGCAAGGCCATCGATCCAACAATTGATCTTGACGAGGGAACACTTGCCAGTGTGAGCACTGTTGCAGAGCTAGCAGGTCACTGCTCCGCAAGAGAGCCCTATCAAAGGCCTGACATGAGCCATGCTGTTAATGTTCTATCTTCTCTGGTGGAGCTTTGGAAACCAAGTGATCAAAGCTCTGAAGACATATATGGTATCGATCTTGAAATGTCATTGCCACAAGCACTTAAGAAATGGCAGGCTTATGAAGGTAGGAGCAATATGGAATCCTCTTCGTCATCGCTTCTTCCAAGCTTGGACAATACCCAAACTAGCATCCCCACTCGCCCCTATGGCTTTGCCGAGTCTTTCACATCTGCAGATGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

981

Amino Acids

107.02

Weight (kDa)

6.0

Isoelectric Point (pI)

36.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	63 - 98	3.1e-07	Leucine rich repeat N-terminal domain
LRRNT_2	PF08263	366 - 400	2.2e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	422 - 463	1.5e-07	Leucine rich repeat
LRR_4	PF12799	427 - 467	2.7e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	629 - 902	4.9e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	631 - 847	7.1e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66150
fragaria_vesca	FvH4_1g29920
malus_domestica	MD09G1266700.v1.1 MD17G1262700.v1.1
prunus_persica	Prupe.3G164300_v2.0.a1
pyrus_communis	pycom09g17970 pycom17g26270
rosa_chinensis	RchiOBHm_Chr3g0492431
rosa_laevigata	RLG00000022769
rosa_multiflora	Rmu_sc0003156.1_g000009 Rmu_sc0027181.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392320
rosa_rugosa	Rorug03G0253800
rosa_samantha	Rh3AG304000 Rh3BG339900 Rh3CG337100 Rh3DG339100
rosa_wichuraiana	Rw3G026800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2639
AccB1I	GGYRCC	1 cut(s)	2401
AccB7I	CCANNNNNTGG	2 cut(s)	1076, 1294
AciI	CCGC	3 cut(s)	2338, 2575, 2661
AclWI	GGATC	9 cut(s)	310, 323, 1082, 1163, 1193, 1330, 1690, 1723, 2582
AcsI	RAATTY	5 cut(s)	601, 976, 1489, 1561, 2009
AcuI	CTGAAG	4 cut(s)	506, 2178, 2189, 2775
AfaI	GTAC	3 cut(s)	110, 346, 1471
AflII	CTTAAG	3 cut(s)	901, 1277, 2801
AflIII	ACRYGT	1 cut(s)	100
AjnI	CCWGG	2 cut(s)	702, 1075
AjuI	GAANNNNNNNTTGG	2 cut(s)	1281, 1313
AleI	CACNNNNGTG	1 cut(s)	64
AloI	GAACNNNNNNTCC	2 cut(s)	1243, 1275
Alw21I	GWGCWC	1 cut(s)	2633
Alw26I	GTCTC	4 cut(s)	753, 1247, 1488, 2262
AlwI	GGATC	9 cut(s)	310, 323, 1082, 1163, 1193, 1330, 1690, 1723, 2582
AlwNI	CAGNNNCTG	1 cut(s)	2420
Ama87I	CYCGRG	2 cut(s)	668, 1092
AoxI	GGCC	8 cut(s)	416, 709, 859, 1078, 1478, 2153, 2580, 2681
ApaI	GGGCCC	1 cut(s)	863
ApeKI	GCWGC	4 cut(s)	197, 288, 766, 792
ApoI	RAATTY	5 cut(s)	601, 976, 1489, 1561, 2009
AseI	ATTAAT	1 cut(s)	2559
Asp700I	GAANNNNTTC	2 cut(s)	1255, 2097
AspLEI	GCGC	1 cut(s)	185
AsuC2I	CCSGG	4 cut(s)	260, 313, 669, 670
AsuHPI	GGTGA	6 cut(s)	319, 320, 916, 1705, 1855, 2473
AsuII	TTCGAA	1 cut(s)	2545
AsuNHI	GCTAGC	3 cut(s)	208, 1339, 2644
AvaI	CYCGRG	2 cut(s)	668, 1092
AvaII	GGWCC	4 cut(s)	252, 262, 929, 1001
AxyI	CCTNAGG	1 cut(s)	2514
BaeGI	GKGCMC	1 cut(s)	863
BamHI	GGATCC	1 cut(s)	315
BanI	GGYRCC	1 cut(s)	2401
BanII	GRGCYC	3 cut(s)	863, 1682, 2673
BbsI	GAAGAC	1 cut(s)	2763
Bbv12I	GWGCWC	1 cut(s)	2633
BbvI	GCAGC	4 cut(s)	184, 275, 778, 804
BceAI	ACGGC	2 cut(s)	570, 1465
BcgI	CGANNNNNNTGC	2 cut(s)	2566, 2600
BciT130I	CCWGG	2 cut(s)	704, 1077
BciVI	GTATCC	2 cut(s)	1093, 2387
BclI	TGATCA	1 cut(s)	2743
BcnI	CCSGG	4 cut(s)	260, 313, 669, 670
BcoDI	GTCTC	4 cut(s)	753, 1247, 1488, 2262
BfmI	CTRYAG	2 cut(s)	198, 2931
BfrI	CTTAAG	3 cut(s)	901, 1277, 2801
BfuAI	ACCTGC	1 cut(s)	2639
BfuI	GTATCC	2 cut(s)	1093, 2387
BglI	GCCNNNNNGGC	1 cut(s)	2907
BisI	GCNGC	5 cut(s)	198, 289, 767, 793, 2339
BlsI	GCNGC	5 cut(s)	199, 290, 768, 794, 2340
Bme1390I	CCNGG	6 cut(s)	260, 313, 669, 670, 704, 1077
Bme18I	GGWCC	4 cut(s)	252, 262, 929, 1001
BmeT110I	CYCGRG	2 cut(s)	668, 1092
BmiI	GGNNCC	6 cut(s)	264, 317, 417, 861, 1252, 2403
BmrFI	CCNGG	6 cut(s)	260, 313, 669, 670, 704, 1077
BmsI	GCATC	5 cut(s)	184, 596, 649, 2062, 2898
BmtI	GCTAGC	3 cut(s)	212, 1343, 2648
BpiI	GAAGAC	1 cut(s)	2763
BpmI	CTGGAG	3 cut(s)	563, 725, 2331
Bpu10I	CCTNAGC	1 cut(s)	2313
Bpu14I	TTCGAA	1 cut(s)	2545
BpuEI	CTTGAG	3 cut(s)	200, 941, 2106
BpuMI	CCSGG	4 cut(s)	260, 313, 669, 670
Bsa29I	ATCGAT	2 cut(s)	2586, 2772
BsaAI	YACGTR	1 cut(s)	283
BsaI	GGTCTC	2 cut(s)	1247, 2262
BsaJI	CCNNGG	6 cut(s)	668, 997, 1020, 1413, 2037, 2293
BsaWI	WCCGGW	4 cut(s)	629, 640, 926, 937
BsaXI	ACNNNNNCTCC	6 cut(s)	698, 728, 889, 919, 1243, 1273
Bse1I	ACTGG	7 cut(s)	66, 712, 1252, 1299, 2156, 2425, 2622
Bse21I	CCTNAGG	1 cut(s)	2514
Bse3DI	GCAATG	4 cut(s)	1695, 2095, 2199, 2786
BseBI	CCWGG	2 cut(s)	704, 1077
BseCI	ATCGAT	2 cut(s)	2586, 2772
BseDI	CCNNGG	6 cut(s)	668, 997, 1020, 1413, 2037, 2293
BseGI	GGATG	5 cut(s)	254, 1699, 1815, 2089, 2889
BseMI	GCAATG	4 cut(s)	1695, 2095, 2199, 2786
BseMII	CTCAG	8 cut(s)	306, 389, 621, 819, 1499, 2010, 2146, 2505
BseNI	ACTGG	7 cut(s)	66, 712, 1252, 1299, 2156, 2425, 2622
BseRI	GAGGAG	4 cut(s)	910, 1349, 1923, 2531
BseSI	GKGCMC	1 cut(s)	863
BseXI	GCAGC	4 cut(s)	184, 275, 778, 804
BseYI	CCCAGC	2 cut(s)	140, 1979
BsgI	GTGCAG	3 cut(s)	1197, 1338, 1521
BshFI	GGCC	8 cut(s)	418, 711, 861, 1080, 1480, 2155, 2582, 2683
BshNI	GGYRCC	1 cut(s)	2401
BshVI	ATCGAT	2 cut(s)	2586, 2772
BsiHKAI	GWGCWC	1 cut(s)	2633
BsiHKCI	CYCGRG	2 cut(s)	668, 1092
BslFI	GGGAC	3 cut(s)	1933, 2140, 2398
BsmAI	GTCTC	4 cut(s)	753, 1247, 1488, 2262
BsmBI	CGTCTC	1 cut(s)	1488
BsmFI	GGGAC	3 cut(s)	1933, 2140, 2398
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	8 cut(s)	418, 711, 861, 1080, 1480, 2155, 2582, 2683
Bso31I	GGTCTC	2 cut(s)	1247, 2262
BsoBI	CYCGRG	2 cut(s)	668, 1092
Bsp119I	TTCGAA	1 cut(s)	2545
Bsp120I	GGGCCC	1 cut(s)	859
Bsp1286I	GDGCHC	4 cut(s)	863, 1682, 2633, 2673
BspACI	CCGC	3 cut(s)	2338, 2575, 2661
BspANI	GGCC	8 cut(s)	418, 711, 861, 1080, 1480, 2155, 2582, 2683
BspCNI	CTCAG	8 cut(s)	305, 388, 620, 820, 1498, 2011, 2145, 2506
BspDI	ATCGAT	2 cut(s)	2586, 2772
BspLI	GGNNCC	6 cut(s)	264, 317, 417, 861, 1252, 2403
BspMAI	CTGCAG	2 cut(s)	202, 2935
BspMI	ACCTGC	1 cut(s)	2639
BspOI	GCTAGC	3 cut(s)	212, 1343, 2648
BspPI	GGATC	9 cut(s)	310, 323, 1082, 1163, 1193, 1330, 1690, 1723, 2582
BspQI	GCTCTTC	2 cut(s)	215, 2070
BspT104I	TTCGAA	1 cut(s)	2545
BspT107I	GGYRCC	1 cut(s)	2401
BspTI	CTTAAG	3 cut(s)	901, 1277, 2801
BspTNI	GGTCTC	2 cut(s)	1247, 2262
BsrDI	GCAATG	4 cut(s)	1695, 2095, 2199, 2786
BsrI	ACTGG	7 cut(s)	66, 712, 1252, 1299, 2156, 2425, 2622
BssECI	CCNNGG	6 cut(s)	668, 997, 1020, 1413, 2037, 2293
BssT1I	CCWWGG	5 cut(s)	997, 1020, 1413, 2037, 2293
Bst2UI	CCWGG	2 cut(s)	704, 1077
Bst4CI	ACNGT	6 cut(s)	1219, 1532, 1626, 1744, 1924, 2635
Bst6I	CTCTTC	6 cut(s)	215, 426, 1797, 1900, 2070, 2851
BstAFI	CTTAAG	3 cut(s)	901, 1277, 2801
BstBAI	YACGTR	1 cut(s)	283
BstBI	TTCGAA	1 cut(s)	2545
BstEII	GGTNACC	2 cut(s)	307, 326
BstENI	CCTNNNNNAGG	3 cut(s)	1452, 2160, 2677
BstF5I	GGATG	5 cut(s)	254, 1699, 1815, 2089, 2889
BstHHI	GCGC	1 cut(s)	185
BstMAI	GTCTC	4 cut(s)	753, 1247, 1488, 2262
BstMWI	GCNNNNNNNGC	7 cut(s)	276, 285, 617, 763, 2318, 2645, 2907
BstNI	CCWGG	2 cut(s)	704, 1077
BstNSI	RCATGY	2 cut(s)	104, 2527
BstPI	GGTNACC	2 cut(s)	307, 326
BstSCI	CCNGG	6 cut(s)	258, 311, 667, 668, 702, 1075
BstSFI	CTRYAG	2 cut(s)	198, 2931
BstSLI	GKGCMC	1 cut(s)	863
BstSNI	TACGTA	1 cut(s)	283
BstV1I	GCAGC	4 cut(s)	184, 275, 778, 804
BstV2I	GAAGAC	1 cut(s)	2763
BstX2I	RGATCY	3 cut(s)	315, 1322, 1715
BstXI	CCANNNNNNTGG	2 cut(s)	104, 2181
BstYI	RGATCY	3 cut(s)	315, 1322, 1715
Bsu15I	ATCGAT	2 cut(s)	2586, 2772
Bsu36I	CCTNAGG	1 cut(s)	2514
BsuI	GTATCC	2 cut(s)	1093, 2387
BsuRI	GGCC	8 cut(s)	418, 711, 861, 1080, 1480, 2155, 2582, 2683
BsuTUI	ATCGAT	2 cut(s)	2586, 2772
BtgZI	GCGATG	1 cut(s)	2838
BtsCI	GGATG	5 cut(s)	254, 1699, 1815, 2089, 2889
BtsI	GCAGTG	1 cut(s)	2653
BveI	ACCTGC	1 cut(s)	2639
CaiI	CAGNNNCTG	1 cut(s)	2420
CfoI	GCGC	1 cut(s)	185
Cfr9I	CCCGGG	1 cut(s)	668
ClaI	ATCGAT	2 cut(s)	2586, 2772
Csp6I	GTAC	3 cut(s)	109, 345, 1470
CviQI	GTAC	3 cut(s)	109, 345, 1470
Eam1104I	CTCTTC	6 cut(s)	215, 426, 1797, 1900, 2070, 2851
EarI	CTCTTC	6 cut(s)	215, 426, 1797, 1900, 2070, 2851
Eco105I	TACGTA	1 cut(s)	283
Eco130I	CCWWGG	5 cut(s)	997, 1020, 1413, 2037, 2293
Eco147I	AGGCCT	1 cut(s)	2683
Eco24I	GRGCYC	3 cut(s)	863, 1682, 2673
Eco31I	GGTCTC	2 cut(s)	1247, 2262
Eco32I	GATATC	1 cut(s)	1848
Eco47I	GGWCC	4 cut(s)	252, 262, 929, 1001
Eco57I	CTGAAG	4 cut(s)	506, 2178, 2189, 2775
Eco81I	CCTNAGG	1 cut(s)	2514
Eco88I	CYCGRG	2 cut(s)	668, 1092
Eco91I	GGTNACC	2 cut(s)	307, 326
EcoNI	CCTNNNNNAGG	3 cut(s)	1452, 2160, 2677
EcoO109I	RGGNCCY	1 cut(s)	416
EcoO65I	GGTNACC	2 cut(s)	307, 326
EcoRI	GAATTC	1 cut(s)	1489
EcoRII	CCWGG	2 cut(s)	702, 1075
EcoRV	GATATC	1 cut(s)	1848
EcoT14I	CCWWGG	5 cut(s)	997, 1020, 1413, 2037, 2293
EcoT38I	GRGCYC	3 cut(s)	863, 1682, 2673
ErhI	CCWWGG	5 cut(s)	997, 1020, 1413, 2037, 2293
Esp3I	CGTCTC	1 cut(s)	1488
FaqI	GGGAC	3 cut(s)	1933, 2140, 2398
FbaI	TGATCA	1 cut(s)	2743
Fnu4HI	GCNGC	5 cut(s)	198, 289, 767, 793, 2339
FokI	GGATG	5 cut(s)	261, 1686, 1802, 2096, 2876
FriOI	GRGCYC	3 cut(s)	863, 1682, 2673
Fsp4HI	GCNGC	5 cut(s)	198, 289, 767, 793, 2339
GlaI	GCGC	1 cut(s)	184
GluI	GCNGC	5 cut(s)	198, 289, 767, 793, 2339
GsaI	CCCAGC	2 cut(s)	144, 1983
GsuI	CTGGAG	3 cut(s)	563, 725, 2331
HaeIII	GGCC	8 cut(s)	418, 711, 861, 1080, 1480, 2155, 2582, 2683
HhaI	GCGC	1 cut(s)	185
Hin6I	GCGC	1 cut(s)	183
HinP1I	GCGC	1 cut(s)	183
HincII	GTYRAC	3 cut(s)	679, 885, 2196
HindII	GTYRAC	3 cut(s)	679, 885, 2196
HindIII	AAGCTT	2 cut(s)	782, 2866
HinfI	GANTC	6 cut(s)	968, 1049, 1191, 2567, 2840, 2918
HpaI	GTTAAC	1 cut(s)	679
HphI	GGTGA	6 cut(s)	319, 320, 916, 1705, 1855, 2473
Hpy166II	GTNNAC	5 cut(s)	480, 679, 885, 924, 2196
Hpy8I	GTNNAC	5 cut(s)	480, 679, 885, 924, 2196
HpyAV	CCTTC	8 cut(s)	347, 1153, 1453, 1512, 2156, 2289, 2541, 2816
HpyCH4III	ACNGT	6 cut(s)	1219, 1532, 1626, 1744, 1924, 2635
HpyCH4IV	ACGT	1 cut(s)	282
HpyF10VI	GCNNNNNNNGC	7 cut(s)	276, 285, 617, 763, 2318, 2645, 2907
HpySE526I	ACGT	1 cut(s)	282
HspAI	GCGC	1 cut(s)	183
Ksp22I	TGATCA	1 cut(s)	2743
KspAI	GTTAAC	1 cut(s)	679
LguI	GCTCTTC	2 cut(s)	215, 2070
Lsp1109I	GCAGC	4 cut(s)	184, 275, 778, 804
LweI	GCATC	5 cut(s)	184, 596, 649, 2062, 2898
MaeII	ACGT	1 cut(s)	282
MfeI	CAATTG	2 cut(s)	2364, 2595
MflI	RGATCY	3 cut(s)	315, 1322, 1715
MhlI	GDGCHC	4 cut(s)	863, 1682, 2633, 2673
MlyI	GAGTC	4 cut(s)	977, 1200, 2561, 2927
MmeI	TCCRAC	2 cut(s)	279, 2615
MroXI	GAANNNNTTC	2 cut(s)	1255, 2097
MslI	CAYNNNNRTG	5 cut(s)	64, 247, 846, 1820, 2179
MspCI	CTTAAG	3 cut(s)	901, 1277, 2801
MspR9I	CCNGG	6 cut(s)	260, 313, 669, 670, 704, 1077
MunI	CAATTG	2 cut(s)	2364, 2595
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	2 cut(s)	704, 1077
MwoI	GCNNNNNNNGC	7 cut(s)	276, 285, 617, 763, 2318, 2645, 2907
NciI	CCSGG	4 cut(s)	260, 313, 669, 670
NheI	GCTAGC	3 cut(s)	208, 1339, 2644
NlaIV	GGNNCC	6 cut(s)	264, 317, 417, 861, 1252, 2403
NmeAIII	GCCGAG	1 cut(s)	2941
NmuCI	GTSAC	7 cut(s)	307, 326, 1192, 1870, 2428, 2533, 2651
NspI	RCATGY	2 cut(s)	104, 2527
NspV	TTCGAA	1 cut(s)	2545
OliI	CACNNNNGTG	1 cut(s)	64
PaeI	GCATGC	1 cut(s)	2527
PaeR7I	CTCGAG	1 cut(s)	1092
PceI	AGGCCT	1 cut(s)	2683
PciI	ACATGT	1 cut(s)	100
PciSI	GCTCTTC	2 cut(s)	215, 2070
PcsI	WCGNNNNNNNCGW	1 cut(s)	252
PctI	GAATGC	1 cut(s)	841
PdmI	GAANNNNTTC	2 cut(s)	1255, 2097
PfeI	GAWTC	2 cut(s)	1049, 2840
PflMI	CCANNNNNTGG	2 cut(s)	1076, 1294
PkrI	GCNGC	5 cut(s)	199, 290, 768, 794, 2340
PleI	GAGTC	4 cut(s)	976, 1199, 2561, 2926
PpsI	GAGTC	4 cut(s)	976, 1199, 2561, 2926
Ppu21I	YACGTR	1 cut(s)	283
PscI	ACATGT	1 cut(s)	100
PshBI	ATTAAT	1 cut(s)	2559
Psp6I	CCWGG	2 cut(s)	702, 1075
PspEI	GGTNACC	2 cut(s)	307, 326
PspFI	CCCAGC	2 cut(s)	140, 1979
PspGI	CCWGG	2 cut(s)	702, 1075
PspN4I	GGNNCC	6 cut(s)	264, 317, 417, 861, 1252, 2403
PspOMI	GGGCCC	1 cut(s)	859
PspXI	VCTCGAGB	1 cut(s)	1092
PstI	CTGCAG	2 cut(s)	202, 2935
PstNI	CAGNNNCTG	1 cut(s)	2420
PsuI	RGATCY	3 cut(s)	315, 1322, 1715
RsaI	GTAC	3 cut(s)	110, 346, 1471
RsaNI	GTAC	3 cut(s)	109, 345, 1470
RseI	CAYNNNNRTG	5 cut(s)	64, 247, 846, 1820, 2179
SapI	GCTCTTC	2 cut(s)	215, 2070
SatI	GCNGC	5 cut(s)	198, 289, 767, 793, 2339
SchI	GAGTC	4 cut(s)	977, 1200, 2561, 2927
ScrFI	CCNGG	6 cut(s)	260, 313, 669, 670, 704, 1077
SduI	GDGCHC	4 cut(s)	863, 1682, 2633, 2673
SfaNI	GCATC	5 cut(s)	184, 596, 649, 2062, 2898
SfcI	CTRYAG	2 cut(s)	198, 2931
Sfr274I	CTCGAG	1 cut(s)	1092
SfuI	TTCGAA	1 cut(s)	2545
SinI	GGWCC	4 cut(s)	252, 262, 929, 1001
SlaI	CTCGAG	1 cut(s)	1092
SmaI	CCCGGG	1 cut(s)	670
SmiMI	CAYNNNNRTG	5 cut(s)	64, 247, 846, 1820, 2179
SmlI	CTYRAG	7 cut(s)	215, 901, 956, 1092, 1277, 2121, 2801
SmoI	CTYRAG	7 cut(s)	215, 901, 956, 1092, 1277, 2121, 2801
SnaBI	TACGTA	1 cut(s)	283
SphI	GCATGC	1 cut(s)	2527
SseBI	AGGCCT	1 cut(s)	2683
SsiI	CCGC	3 cut(s)	2338, 2575, 2661
SspI	AATATT	1 cut(s)	35
StuI	AGGCCT	1 cut(s)	2683
StyD4I	CCNGG	6 cut(s)	258, 311, 667, 668, 702, 1075
StyI	CCWWGG	5 cut(s)	997, 1020, 1413, 2037, 2293
TaaI	ACNGT	6 cut(s)	1219, 1532, 1626, 1744, 1924, 2635
TaiI	ACGT	1 cut(s)	285
TaqI	TCGA	4 cut(s)	1093, 2545, 2586, 2772
TauI	GCSGC	1 cut(s)	2341
TfiI	GAWTC	2 cut(s)	1049, 2840
TseFI	GTSAC	7 cut(s)	307, 326, 1192, 1870, 2428, 2533, 2651
TseI	GCWGC	4 cut(s)	197, 288, 766, 792
Tsp45I	GTSAC	7 cut(s)	307, 326, 1192, 1870, 2428, 2533, 2651
TspDTI	ATGAA	6 cut(s)	231, 1748, 2106, 2131, 2225, 2835
TspGWI	ACGGA	1 cut(s)	1879
TspMI	CCCGGG	1 cut(s)	668
Van91I	CCANNNNNTGG	2 cut(s)	1076, 1294
Vha464I	CTTAAG	3 cut(s)	901, 1277, 2801
VpaK11BI	GGWCC	4 cut(s)	252, 262, 929, 1001
VspI	ATTAAT	1 cut(s)	2559
XagI	CCTNNNNNAGG	3 cut(s)	1452, 2160, 2677
XapI	RAATTY	5 cut(s)	601, 976, 1489, 1561, 2009
XceI	RCATGY	2 cut(s)	104, 2527
XcmI	CCANNNNNNNNNTGG	1 cut(s)	555
XhoI	CTCGAG	1 cut(s)	1092
XmaI	CCCGGG	1 cut(s)	668
XmnI	GAANNNNTTC	2 cut(s)	1255, 2097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.