Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0012762

Physical Location & Seq

Genomic Coordinates Forward (+)

36380328 .. 36385137

Gene Structure 4810 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG339900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGGAGAAGAAGAAACCCCAACATGTTGGGTACTACTACAAGCTCTTGGCTTTTCTGGTTGCTGGGTTTTCTTCCCTGTTGCTCTGTGCCAACTCTCAACCAAGCGCAAGCAACGATGCTGCAGTAATGCTAGCCCTCAAGAAGAGCCTCAACCCGTCAAGTTCATTCGGATGGTCCGACCCGGACCCGTGCAAGTGGAGCTATGTAGGCTGCTCAGGTGACAATAGGGTGACCCGGATCCAGATTGGTCACCAAAACCTTCAAGGTACGCTCCCTACAAGCCTCCAAAACCTCACTCAGCTACAGCGATTAGAGGTTCAGTGGAACAAGATTTCGGGGCCTCTTCCAAGCCTAAGTGGGTTGGGCTCGTTACAAGTGTTGTTACTTGGTAACAACTTGTTTACTTCAGTTCCTAGTGATTTCTTTGCTGGCATGACTTCACTTCAGTCTGTTGAGATTGACAACAACCCATTTACGGCTTGGGAAATCCCCCAAACCCTCCAGAACGCATCGTCACTTCAAAATTTCTCAGCCAATTCTGCCAACATTACCGGAAAGATACCGGATTTTTTCAACGCCGATGCGTTTCCCGGGCTGGTTAACTTGCACTTGGCTTTCAATTACCTGGAGGGCCAATTGCCGGAGACCTTTTCGGGGTCAGAAATGCAGTCTCTTTGGCTTAATGGGCAGCAAAGTGTAGGTAAGCTTGTTGGCAGCATTGATGTTTTACGCAACATGACTACGCTGACTGAGGTTTGGTTGCATTCAAATGGGTTTTCGGGCCCGTTGCCCGACTTTTCGGGGTTGACAGATTTGAGGAGCTTAAGTTTAAGAGATAATTTGTTCACCGGACCTGTTCCGGTGTCATTGTTGAACCTCAAGTCATTAGAGTCTCTGAATTTGACAAACAACTTGCTCCAAGGACCAATGCCAGATTTTCCCAAGGGGGTTTCAGTAGATATGACTAAGGATTCAAATAACTTTTGCCTGCCAAGTCCTGGCCCATGCGATCCTCGAGTGGATACTTTGCTTTTGATTGTTAGCTCAATGTCTTATCCTCAAAAGTTTGCAGAGAATTGGAAGGGGAATGATCCCTGTGCAGATTGGATCGGAGTCACTTGTAGAAATGGCAACATTACAGTCATCAATTTTCAGAAAATGGGTCTCACCGGAACCATTTCTCCGGCTTTTGCCTCACTTAAGTTGCTCCAAAGACTGGTTCTTGCTGATAACAATTTGACAGGATCTATTCCAGAGGAGCTAGCCACTCTGCCTGCACTTACTCAATTAGATGTGTCAAACAATCTGCTCTATGGCAAAATCCCAGCTTTTACCAAGGCTAATGTGATTGTAAACACTGATGGCAACCCTGATATAGGGAAGGAAAAGAGTACCAATGGGCCGTCTCAGAATTCAACTAACCCTTCTACAAGTATTTCTGGAAATGGTAGCAGTTCTGGACCTCATGGGAAGAAATCTTCAAATTTAGTAGGAGTTATTGTGTTCTCTGTTATGGGTGGTGTTTTTGTGATGTTCTTAATTGCACTGTTGGTCATCTGTTTGTATAGAACAAAACAAAAGCGATTGACCAGAGTTCAGAGCCCAAATGCGATGGTAATCCATCCTCGCCATTCTGGATCTGATAATGAGAGCATGAAGATAACAGTTGCAGGCTCTAGTGTTAGCGTTGGTACAATTAGTGAAGCTCATACTCTTCCTAGTAGTGAGCCAAGCGACATCCAAATGGTTGAAGCAGGAAACATGGTGATATCTATTCAAGTGCTACGGAGTGTGACCAACAATTTCAGTGAAGAAAATATATTGGGAAGAGGAGGCTTCGGGACAGTGTATAAAGGAGAACTGCATGATGGAACAAAGATTGCTGTTAAGAGAATGGAGGCTGGGGTAATAGCCGGAAAGGGGCTTGCAGAATTTAAGTCTGAGATTGCAGTTTTGACCAAGGTTCGGCACAGGCATCTAGTTGCTCTTCTGGGGTATTGTTTGGATGGCAATGAAAGGCTTCTTGTATATGAGTATATGCCTCAAGGGACACTCAGTAGGTTCATCTTCAACTGGCCTGAAGAAGGACTGAAGCCACTTGAATGGACAAAAAGGTTGACCATTGCGTTAGATGTAGCAAGGGGAGTTGAGTATCTTCATGGTTTAGCCCATCAGAGTTTTATACATAGAGACCTAAAGCCTTCAAACATTCTCCTTGGAGATGATATGAGGGCTAAGGTTGCAGATTTTGGTCTTGTGCGGCTTGCTCCAGAGGGTAAAGGTTCAATTGAAACAAGAATTGCAGGGACTTTTGGATACTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACAACTAAAGTAGATGTATTCAGCTTCGGGGTGATTTTGATGGAGCTAATCACAGGGAGAAAAGCACTTGACGAGAGCCAGCCTGAGGAGAGCATGCACCTTGTCACATGGTTTCGGAGGATTTTTATTAATAAGGACTCGTTCCGCAAGGCCATTGATCCAACAATTGATCTTGACGAGGGAACACTTGCCAGTGTGAGCACTGTTGCAGAGCTAGCAGGTCACTGCTCCGCAAGAGAGCCCTATCAAAGGCCTGACATGAGCCATGCTGTTAATGTTCTATCTTCTCTGGTGGAGCTTTGGAAACCAAGTGATCAAAGCTCTGAAGACATATATGGTATCGATCTTGAAATGTCATTGCCACAAGCACTTAAGAAATGGCAGGCTTATGAAGGTAGGAGCAATATGGAATCCTCTTCGTCATCACTTCTTCCAAGCTTAGACAATACCCAGACTAGCATCCCCACTCGCCCCTATGGCTTTGCCGAGTCTTTCACATCTGCAGATGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

955

Amino Acids

103.91

Weight (kDa)

6.07

Isoelectric Point (pI)

37.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	37 - 72	3e-07	Leucine rich repeat N-terminal domain
LRRNT_2	PF08263	340 - 374	2.2e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	396 - 437	1.1e-06	Leucine rich repeat
Pkinase	PF00069	603 - 876	4.7e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	605 - 821	6.7e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66150
fragaria_vesca	FvH4_1g29920
malus_domestica	MD09G1266700.v1.1 MD17G1262700.v1.1
prunus_persica	Prupe.3G164300_v2.0.a1
pyrus_communis	pycom09g17970 pycom17g26270
rosa_chinensis	RchiOBHm_Chr3g0492431
rosa_laevigata	RLG00000022769
rosa_multiflora	Rmu_sc0003156.1_g000009 Rmu_sc0027181.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392320
rosa_rugosa	Rorug03G0253800
rosa_samantha	Rh3AG304000 Rh3BG339900 Rh3CG337100 Rh3DG339100
rosa_wichuraiana	Rw3G026800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2561
AccB1I	GGYRCC	1 cut(s)	2323
AccB7I	CCANNNNNTGG	2 cut(s)	998, 1216
AciI	CCGC	3 cut(s)	2260, 2497, 2583
AclWI	GGATC	8 cut(s)	232, 245, 1004, 1085, 1115, 1252, 1645, 2504
AcsI	RAATTY	5 cut(s)	523, 898, 1411, 1483, 1931
AcuI	CTGAAG	5 cut(s)	390, 428, 2100, 2111, 2697
AfaI	GTAC	4 cut(s)	32, 268, 1393, 1693
AflII	CTTAAG	3 cut(s)	823, 1199, 2723
AflIII	ACRYGT	1 cut(s)	22
AjnI	CCWGG	2 cut(s)	624, 997
AjuI	GAANNNNNNNTTGG	2 cut(s)	1203, 1235
AloI	GAACNNNNNNTCC	2 cut(s)	1165, 1197
Alw21I	GWGCWC	1 cut(s)	2555
Alw26I	GTCTC	6 cut(s)	638, 675, 897, 1169, 1410, 2184
AlwI	GGATC	8 cut(s)	232, 245, 1004, 1085, 1115, 1252, 1645, 2504
AlwNI	CAGNNNCTG	1 cut(s)	2342
Ama87I	CYCGRG	2 cut(s)	590, 1014
AoxI	GGCC	8 cut(s)	338, 631, 781, 1000, 1400, 2075, 2502, 2603
ApaI	GGGCCC	1 cut(s)	785
ApeKI	GCWGC	4 cut(s)	119, 210, 688, 714
ApoI	RAATTY	5 cut(s)	523, 898, 1411, 1483, 1931
AseI	ATTAAT	1 cut(s)	2481
Asp700I	GAANNNNTTC	2 cut(s)	1177, 2019
AspLEI	GCGC	1 cut(s)	107
AsuC2I	CCSGG	4 cut(s)	182, 235, 591, 592
AsuHPI	GGTGA	7 cut(s)	230, 241, 242, 838, 1159, 1777, 2395
AsuNHI	GCTAGC	3 cut(s)	130, 1261, 2566
AvaI	CYCGRG	2 cut(s)	590, 1014
AvaII	GGWCC	5 cut(s)	174, 184, 851, 923, 1460
AxyI	CCTNAGG	1 cut(s)	2436
BaeGI	GKGCMC	1 cut(s)	785
BamHI	GGATCC	1 cut(s)	237
BanI	GGYRCC	1 cut(s)	2323
BanII	GRGCYC	4 cut(s)	368, 785, 1604, 2595
BbsI	GAAGAC	1 cut(s)	2685
Bbv12I	GWGCWC	1 cut(s)	2555
BbvI	GCAGC	4 cut(s)	106, 197, 700, 726
BccI	CCATC	9 cut(s)	165, 1355, 1606, 1629, 1862, 2000, 2178, 2386, 2852
BceAI	ACGGC	2 cut(s)	492, 1387
BciT130I	CCWGG	2 cut(s)	626, 999
BciVI	GTATCC	2 cut(s)	1015, 2309
BclI	TGATCA	1 cut(s)	2665
BcnI	CCSGG	4 cut(s)	182, 235, 591, 592
BcoDI	GTCTC	6 cut(s)	638, 675, 897, 1169, 1410, 2184
BfaI	CTAG	8 cut(s)	131, 414, 1262, 1677, 1719, 1979, 2567, 2808
BfmI	CTRYAG	3 cut(s)	120, 302, 2853
BfrI	CTTAAG	3 cut(s)	823, 1199, 2723
BfuAI	ACCTGC	1 cut(s)	2561
BfuI	GTATCC	2 cut(s)	1015, 2309
BglI	GCCNNNNNGGC	1 cut(s)	2829
BisI	GCNGC	5 cut(s)	120, 211, 689, 715, 2261
BlsI	GCNGC	5 cut(s)	121, 212, 690, 716, 2262
Bme1390I	CCNGG	6 cut(s)	182, 235, 591, 592, 626, 999
Bme18I	GGWCC	5 cut(s)	174, 184, 851, 923, 1460
BmeT110I	CYCGRG	2 cut(s)	590, 1014
BmiI	GGNNCC	6 cut(s)	186, 239, 339, 783, 1174, 2325
BmrFI	CCNGG	6 cut(s)	182, 235, 591, 592, 626, 999
BmsI	GCATC	5 cut(s)	106, 518, 571, 1984, 2820
BmtI	GCTAGC	3 cut(s)	134, 1265, 2570
BpiI	GAAGAC	1 cut(s)	2685
BpmI	CTGGAG	3 cut(s)	485, 647, 2253
Bpu10I	CCTNAGC	2 cut(s)	214, 2235
BpuEI	CTTGAG	3 cut(s)	122, 863, 2028
BpuMI	CCSGG	4 cut(s)	182, 235, 591, 592
Bsa29I	ATCGAT	1 cut(s)	2694
BsaBI	GATNNNNATC	1 cut(s)	1616
BsaI	GGTCTC	3 cut(s)	638, 1169, 2184
BsaJI	CCNNGG	6 cut(s)	590, 919, 942, 1335, 1959, 2215
BsaWI	WCCGGW	5 cut(s)	551, 562, 848, 859, 1169
BsaXI	ACNNNNNCTCC	6 cut(s)	811, 841, 1165, 1195, 1485, 1515
Bse1I	ACTGG	4 cut(s)	1221, 2078, 2347, 2544
Bse21I	CCTNAGG	1 cut(s)	2436
Bse3DI	GCAATG	3 cut(s)	2017, 2121, 2708
Bse8I	GATNNNNATC	1 cut(s)	1616
BseBI	CCWGG	2 cut(s)	626, 999
BseCI	ATCGAT	1 cut(s)	2694
BseDI	CCNNGG	6 cut(s)	590, 919, 942, 1335, 1959, 2215
BseGI	GGATG	5 cut(s)	176, 1621, 1737, 2011, 2811
BseJI	GATNNNNATC	1 cut(s)	1616
BseMI	GCAATG	3 cut(s)	2017, 2121, 2708
BseMII	CTCAG	8 cut(s)	228, 311, 543, 741, 1421, 1932, 2068, 2427
BseNI	ACTGG	4 cut(s)	1221, 2078, 2347, 2544
BseRI	GAGGAG	4 cut(s)	832, 1271, 1845, 2453
BseSI	GKGCMC	1 cut(s)	785
BseXI	GCAGC	4 cut(s)	106, 197, 700, 726
BseYI	CCCAGC	3 cut(s)	62, 1324, 1901
BsgI	GTGCAG	2 cut(s)	1119, 1260
BshFI	GGCC	8 cut(s)	340, 633, 783, 1002, 1402, 2077, 2504, 2605
BshNI	GGYRCC	1 cut(s)	2323
BshVI	ATCGAT	1 cut(s)	2694
BsiHKAI	GWGCWC	1 cut(s)	2555
BsiHKCI	CYCGRG	2 cut(s)	590, 1014
BslFI	GGGAC	3 cut(s)	1855, 2062, 2320
BsmAI	GTCTC	6 cut(s)	638, 675, 897, 1169, 1410, 2184
BsmBI	CGTCTC	1 cut(s)	1410
BsmFI	GGGAC	3 cut(s)	1855, 2062, 2320
BsmI	GAATGC	1 cut(s)	763
BsnI	GGCC	8 cut(s)	340, 633, 783, 1002, 1402, 2077, 2504, 2605
Bso31I	GGTCTC	3 cut(s)	638, 1169, 2184
BsoBI	CYCGRG	2 cut(s)	590, 1014
Bsp120I	GGGCCC	1 cut(s)	781
Bsp1286I	GDGCHC	5 cut(s)	368, 785, 1604, 2555, 2595
BspACI	CCGC	3 cut(s)	2260, 2497, 2583
BspANI	GGCC	8 cut(s)	340, 633, 783, 1002, 1402, 2077, 2504, 2605
BspCNI	CTCAG	8 cut(s)	227, 310, 542, 742, 1420, 1933, 2067, 2428
BspDI	ATCGAT	1 cut(s)	2694
BspLI	GGNNCC	6 cut(s)	186, 239, 339, 783, 1174, 2325
BspMAI	CTGCAG	2 cut(s)	124, 2857
BspMI	ACCTGC	1 cut(s)	2561
BspOI	GCTAGC	3 cut(s)	134, 1265, 2570
BspPI	GGATC	8 cut(s)	232, 245, 1004, 1085, 1115, 1252, 1645, 2504
BspQI	GCTCTTC	2 cut(s)	137, 1992
BspT107I	GGYRCC	1 cut(s)	2323
BspTI	CTTAAG	3 cut(s)	823, 1199, 2723
BspTNI	GGTCTC	3 cut(s)	638, 1169, 2184
BsrDI	GCAATG	3 cut(s)	2017, 2121, 2708
BsrI	ACTGG	4 cut(s)	1221, 2078, 2347, 2544
BssECI	CCNNGG	6 cut(s)	590, 919, 942, 1335, 1959, 2215
BssT1I	CCWWGG	5 cut(s)	919, 942, 1335, 1959, 2215
Bst2UI	CCWGG	2 cut(s)	626, 999
Bst4CI	ACNGT	5 cut(s)	1141, 1548, 1666, 1846, 2557
Bst6I	CTCTTC	6 cut(s)	137, 348, 1719, 1822, 1992, 2773
BstAFI	CTTAAG	3 cut(s)	823, 1199, 2723
BstEII	GGTNACC	2 cut(s)	229, 248
BstENI	CCTNNNNNAGG	3 cut(s)	1374, 2082, 2599
BstF5I	GGATG	5 cut(s)	176, 1621, 1737, 2011, 2811
BstHHI	GCGC	1 cut(s)	107
BstMAI	GTCTC	6 cut(s)	638, 675, 897, 1169, 1410, 2184
BstMWI	GCNNNNNNNGC	7 cut(s)	198, 207, 539, 685, 2240, 2567, 2829
BstNI	CCWGG	2 cut(s)	626, 999
BstNSI	RCATGY	2 cut(s)	26, 2449
BstPI	GGTNACC	2 cut(s)	229, 248
BstSCI	CCNGG	6 cut(s)	180, 233, 589, 590, 624, 997
BstSFI	CTRYAG	3 cut(s)	120, 302, 2853
BstSLI	GKGCMC	1 cut(s)	785
BstV1I	GCAGC	4 cut(s)	106, 197, 700, 726
BstV2I	GAAGAC	1 cut(s)	2685
BstX2I	RGATCY	3 cut(s)	237, 1244, 1637
BstXI	CCANNNNNNTGG	2 cut(s)	26, 2103
BstYI	RGATCY	3 cut(s)	237, 1244, 1637
Bsu15I	ATCGAT	1 cut(s)	2694
Bsu36I	CCTNAGG	1 cut(s)	2436
BsuI	GTATCC	2 cut(s)	1015, 2309
BsuRI	GGCC	8 cut(s)	340, 633, 783, 1002, 1402, 2077, 2504, 2605
BsuTUI	ATCGAT	1 cut(s)	2694
BtgZI	GCGATG	1 cut(s)	1625
BtsCI	GGATG	5 cut(s)	176, 1621, 1737, 2011, 2811
BtsI	GCAGTG	1 cut(s)	2575
BtsIMutI	CAGTG	8 cut(s)	326, 1356, 1544, 1813, 1851, 2551, 2553, 2575
BveI	ACCTGC	1 cut(s)	2561
CaiI	CAGNNNCTG	1 cut(s)	2342
CfoI	GCGC	1 cut(s)	107
Cfr9I	CCCGGG	1 cut(s)	590
ClaI	ATCGAT	1 cut(s)	2694
Csp6I	GTAC	4 cut(s)	31, 267, 1392, 1692
CviQI	GTAC	4 cut(s)	31, 267, 1392, 1692
Eam1104I	CTCTTC	6 cut(s)	137, 348, 1719, 1822, 1992, 2773
EarI	CTCTTC	6 cut(s)	137, 348, 1719, 1822, 1992, 2773
Eco130I	CCWWGG	5 cut(s)	919, 942, 1335, 1959, 2215
Eco147I	AGGCCT	1 cut(s)	2605
Eco24I	GRGCYC	4 cut(s)	368, 785, 1604, 2595
Eco31I	GGTCTC	3 cut(s)	638, 1169, 2184
Eco32I	GATATC	1 cut(s)	1770
Eco47I	GGWCC	5 cut(s)	174, 184, 851, 923, 1460
Eco57I	CTGAAG	5 cut(s)	390, 428, 2100, 2111, 2697
Eco81I	CCTNAGG	1 cut(s)	2436
Eco88I	CYCGRG	2 cut(s)	590, 1014
Eco91I	GGTNACC	2 cut(s)	229, 248
EcoNI	CCTNNNNNAGG	3 cut(s)	1374, 2082, 2599
EcoO109I	RGGNCCY	1 cut(s)	338
EcoO65I	GGTNACC	2 cut(s)	229, 248
EcoRI	GAATTC	1 cut(s)	1411
EcoRII	CCWGG	2 cut(s)	624, 997
EcoRV	GATATC	1 cut(s)	1770
EcoT14I	CCWWGG	5 cut(s)	919, 942, 1335, 1959, 2215
EcoT38I	GRGCYC	4 cut(s)	368, 785, 1604, 2595
ErhI	CCWWGG	5 cut(s)	919, 942, 1335, 1959, 2215
Esp3I	CGTCTC	1 cut(s)	1410
FaqI	GGGAC	3 cut(s)	1855, 2062, 2320
FbaI	TGATCA	1 cut(s)	2665
Fnu4HI	GCNGC	5 cut(s)	120, 211, 689, 715, 2261
FokI	GGATG	5 cut(s)	183, 1608, 1724, 2018, 2798
FriOI	GRGCYC	4 cut(s)	368, 785, 1604, 2595
Fsp4HI	GCNGC	5 cut(s)	120, 211, 689, 715, 2261
FspBI	CTAG	8 cut(s)	131, 414, 1262, 1677, 1719, 1979, 2567, 2808
GlaI	GCGC	1 cut(s)	106
GluI	GCNGC	5 cut(s)	120, 211, 689, 715, 2261
GsaI	CCCAGC	3 cut(s)	66, 1328, 1905
GsuI	CTGGAG	3 cut(s)	485, 647, 2253
HaeIII	GGCC	8 cut(s)	340, 633, 783, 1002, 1402, 2077, 2504, 2605
HhaI	GCGC	1 cut(s)	107
Hin6I	GCGC	1 cut(s)	105
HinP1I	GCGC	1 cut(s)	105
HincII	GTYRAC	3 cut(s)	601, 807, 2118
HindII	GTYRAC	3 cut(s)	601, 807, 2118
HindIII	AAGCTT	2 cut(s)	704, 2788
HinfI	GANTC	6 cut(s)	890, 971, 1113, 2489, 2762, 2840
HpaI	GTTAAC	1 cut(s)	601
HphI	GGTGA	7 cut(s)	230, 241, 242, 838, 1159, 1777, 2395
Hpy166II	GTNNAC	6 cut(s)	402, 601, 807, 846, 1354, 2118
Hpy8I	GTNNAC	6 cut(s)	402, 601, 807, 846, 1354, 2118
HpyAV	CCTTC	7 cut(s)	269, 1075, 1375, 1434, 2078, 2211, 2738
HpyCH4III	ACNGT	5 cut(s)	1141, 1548, 1666, 1846, 2557
HpyF10VI	GCNNNNNNNGC	7 cut(s)	198, 207, 539, 685, 2240, 2567, 2829
HspAI	GCGC	1 cut(s)	105
Ksp22I	TGATCA	1 cut(s)	2665
KspAI	GTTAAC	1 cut(s)	601
LguI	GCTCTTC	2 cut(s)	137, 1992
Lsp1109I	GCAGC	4 cut(s)	106, 197, 700, 726
LweI	GCATC	5 cut(s)	106, 518, 571, 1984, 2820
MaeI	CTAG	8 cut(s)	131, 414, 1262, 1677, 1719, 1979, 2567, 2808
MfeI	CAATTG	3 cut(s)	635, 2286, 2517
MflI	RGATCY	3 cut(s)	237, 1244, 1637
MhlI	GDGCHC	5 cut(s)	368, 785, 1604, 2555, 2595
MlyI	GAGTC	4 cut(s)	899, 1122, 2483, 2849
MmeI	TCCRAC	2 cut(s)	201, 2537
MroXI	GAANNNNTTC	2 cut(s)	1177, 2019
MslI	CAYNNNNRTG	4 cut(s)	169, 768, 1742, 2101
MspCI	CTTAAG	3 cut(s)	823, 1199, 2723
MspR9I	CCNGG	6 cut(s)	182, 235, 591, 592, 626, 999
MunI	CAATTG	3 cut(s)	635, 2286, 2517
Mva1269I	GAATGC	1 cut(s)	763
MvaI	CCWGG	2 cut(s)	626, 999
MwoI	GCNNNNNNNGC	7 cut(s)	198, 207, 539, 685, 2240, 2567, 2829
NciI	CCSGG	4 cut(s)	182, 235, 591, 592
NheI	GCTAGC	3 cut(s)	130, 1261, 2566
NlaIV	GGNNCC	6 cut(s)	186, 239, 339, 783, 1174, 2325
NmeAIII	GCCGAG	1 cut(s)	2863
NmuCI	GTSAC	9 cut(s)	218, 229, 248, 513, 1114, 1792, 2350, 2455, 2573
NspI	RCATGY	2 cut(s)	26, 2449
PaeI	GCATGC	1 cut(s)	2449
PaeR7I	CTCGAG	1 cut(s)	1014
PceI	AGGCCT	1 cut(s)	2605
PciI	ACATGT	1 cut(s)	22
PciSI	GCTCTTC	2 cut(s)	137, 1992
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PctI	GAATGC	1 cut(s)	763
PdmI	GAANNNNTTC	2 cut(s)	1177, 2019
PfeI	GAWTC	2 cut(s)	971, 2762
PflMI	CCANNNNNTGG	2 cut(s)	998, 1216
PkrI	GCNGC	5 cut(s)	121, 212, 690, 716, 2262
PleI	GAGTC	4 cut(s)	898, 1121, 2483, 2848
PpsI	GAGTC	4 cut(s)	898, 1121, 2483, 2848
PscI	ACATGT	1 cut(s)	22
PshBI	ATTAAT	1 cut(s)	2481
Psp6I	CCWGG	2 cut(s)	624, 997
PspEI	GGTNACC	2 cut(s)	229, 248
PspFI	CCCAGC	3 cut(s)	62, 1324, 1901
PspGI	CCWGG	2 cut(s)	624, 997
PspN4I	GGNNCC	6 cut(s)	186, 239, 339, 783, 1174, 2325
PspOMI	GGGCCC	1 cut(s)	781
PspXI	VCTCGAGB	1 cut(s)	1014
PstI	CTGCAG	2 cut(s)	124, 2857
PstNI	CAGNNNCTG	1 cut(s)	2342
PsuI	RGATCY	3 cut(s)	237, 1244, 1637
RsaI	GTAC	4 cut(s)	32, 268, 1393, 1693
RsaNI	GTAC	4 cut(s)	31, 267, 1392, 1692
RseI	CAYNNNNRTG	4 cut(s)	169, 768, 1742, 2101
SapI	GCTCTTC	2 cut(s)	137, 1992
SatI	GCNGC	5 cut(s)	120, 211, 689, 715, 2261
SchI	GAGTC	4 cut(s)	899, 1122, 2483, 2849
ScrFI	CCNGG	6 cut(s)	182, 235, 591, 592, 626, 999
SduI	GDGCHC	5 cut(s)	368, 785, 1604, 2555, 2595
SfaNI	GCATC	5 cut(s)	106, 518, 571, 1984, 2820
SfcI	CTRYAG	3 cut(s)	120, 302, 2853
Sfr274I	CTCGAG	1 cut(s)	1014
SinI	GGWCC	5 cut(s)	174, 184, 851, 923, 1460
SlaI	CTCGAG	1 cut(s)	1014
SmaI	CCCGGG	1 cut(s)	592
SmiMI	CAYNNNNRTG	4 cut(s)	169, 768, 1742, 2101
SmlI	CTYRAG	7 cut(s)	137, 823, 878, 1014, 1199, 2043, 2723
SmoI	CTYRAG	7 cut(s)	137, 823, 878, 1014, 1199, 2043, 2723
SphI	GCATGC	1 cut(s)	2449
SseBI	AGGCCT	1 cut(s)	2605
SsiI	CCGC	3 cut(s)	2260, 2497, 2583
SspMI	CTAG	8 cut(s)	131, 414, 1262, 1677, 1719, 1979, 2567, 2808
StuI	AGGCCT	1 cut(s)	2605
StyD4I	CCNGG	6 cut(s)	180, 233, 589, 590, 624, 997
StyI	CCWWGG	5 cut(s)	919, 942, 1335, 1959, 2215
TaaI	ACNGT	5 cut(s)	1141, 1548, 1666, 1846, 2557
TaqI	TCGA	2 cut(s)	1015, 2694
TauI	GCSGC	1 cut(s)	2263
TfiI	GAWTC	2 cut(s)	971, 2762
TscAI	CASTG	8 cut(s)	326, 1363, 1551, 1813, 1851, 2551, 2560, 2582
TseFI	GTSAC	9 cut(s)	218, 229, 248, 513, 1114, 1792, 2350, 2455, 2573
TseI	GCWGC	4 cut(s)	119, 210, 688, 714
Tsp45I	GTSAC	9 cut(s)	218, 229, 248, 513, 1114, 1792, 2350, 2455, 2573
TspDTI	ATGAA	6 cut(s)	153, 1670, 2028, 2053, 2147, 2757
TspGWI	ACGGA	1 cut(s)	1801
TspMI	CCCGGG	1 cut(s)	590
TspRI	CASTG	8 cut(s)	326, 1363, 1551, 1813, 1851, 2551, 2560, 2582
Van91I	CCANNNNNTGG	2 cut(s)	998, 1216
Vha464I	CTTAAG	3 cut(s)	823, 1199, 2723
VpaK11BI	GGWCC	5 cut(s)	174, 184, 851, 923, 1460
VspI	ATTAAT	1 cut(s)	2481
XagI	CCTNNNNNAGG	3 cut(s)	1374, 2082, 2599
XapI	RAATTY	5 cut(s)	523, 898, 1411, 1483, 1931
XceI	RCATGY	2 cut(s)	26, 2449
XcmI	CCANNNNNNNNNTGG	1 cut(s)	477
XhoI	CTCGAG	1 cut(s)	1014
XmaI	CCCGGG	1 cut(s)	590
XmnI	GAANNNNTTC	2 cut(s)	1177, 2019
XspI	CTAG	8 cut(s)	131, 414, 1262, 1677, 1719, 1979, 2567, 2808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.