Rroxscaffold_6G00397520

Domain of unknown function (DUF3475)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
19202177 .. 19208622
6446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00397520.1

Sequence Viewer

Length: 1911 bp
ATGGGAGGCCTTTGTTCCAAGAGCTCCCACGCGGCGGTCAACGCCTCCTCCGCCGCCAACCCTTGGGCCGGCGACAATCGGCGCCAAGTCGTCGATGATTACAAACTCAGAAACTCCAAGAGGACCGCCACCGCCACCGCCGCCGCCACTGAGGTGGCTCCGTCGCCGGCCGTGGATATAAATACTACTCAGCAACAGCAGCAGCCTGCTAGATACTCCCACGACGGTGCTGCCCTTGTCTATGACGGAGGAGCTGACACTACTGACGATTTCTACGATGGGATTCCCCGTTATAAATCCGGCTCCTTCAGGTCTAAGGCCAAGGTTTCTGAGGTGGGATCACGTATAGGCAGAGGGGCGGTATCGGTGCTGGACACGCTTGGGAGCAGCATGACGAATTTGAATGCCGGCGCCGGTTTCAATTCAGCACCGCCGGCCAAGGGGAATGAGATTGCAATCATCGCATTCGAGATTGCAAACACTGTTGTTAAGGGTTACAATCTTATGCAATCTGTTTCGACCAGAAGTATTAAGAATCTGAAAGAAGTGGTGTTTCCTTCGGAAGGTGTGCAGTATTTAGTATCCACAGATACGGACGAGTTGATGAGGATTGTTGCAGCTGATAAAAGGTGGATAGGAGGAGTTAAAGATTTTCTCGGGGAGGTGGTTCGTTTTGGAAATCGATGTAAAGATCCTCAGTGGCACAACTTGGACAGATATTTTGAGAAAATCAGTAGAGAACTTATTCCTCAGAAGCATCTGAAGGATGAGGCCAGTTCGGTAATGCAGCAACTGATGACATTGGTCCAGTATACTGCTGAATTATACCATGAGTTCCACGCATTGGACCGATTTGAACAAGACTATGAACGTAAGCGGTTCGAGGAGAGTATTTCATCTTCCATTGACAGAGGCGATACCCTTGGAATCATGAGGTCTGAACTAAAAAGCCAAAGGAAACTAGTTAAAAGTTTAAAGAAAAAGTCACTTTGGTCCAAAAGTATGGAAGAGGTGATGGAAAAGCTTGTTGAAATAGTTCACTTTTTATATCTAGAGATACATGCTGCCTTTGGTAGTGCTGAGGGTCAGAAAACCGTGGAGGGAGCTACGAATAAACATCAAAAGTTGGGACCTGCTGGACTTTCTTTACATTATGCAAATATCGTTCTTCAAATCGATACTCTTGTAGTCCGGTCAAGTGCTCCGCCTCCAACTACAAGAGATACATTATACCAGAGCTTGCCGCCTAATATAAAATCATCTTTACGCTCCAAATTACACTCTTTCCATATTAAAGAAGAGCTCACTGTCACAGAAATCAAAGCTGAGATGGAGAAAACTCTGCACTGGCTTGTTCCAATGGCTGCAAACACAGCCAATTCTGAGACGAACCGTAAACCAGCTCCACAGACTGAGGTGATTCGGATTGAGACATTCCATCATGCAAATAGGGAAAAAACAGAAGCCTGTGTACTCAAACTAGTATTGTGGCTTCATTATTTGGTCTCTCAAAGTAAGCCTGCATCCACAAGTGTGGGTATGCGGTCACCTGTTAAGTCCATAGCTACCAAAACCCTCCCAAAGACAAATGAGCAGATCAAGGACATTCCCCCCTCAACCATGCTAACAACTGACGACCAGGAGATGCTGCAGGATGTCAGTAAGAGAAGACGGGTTCCCGGAATTAGTAAAAGTCAGGACTTTGACAACGCAAACTCTAGTTTGGGAAACCGGAGCAGATTGAACAAGAGTAACAGTTATACATCTGGGGAAGAAACCAAGAAATTGTTACCTTTCAGTAGGCTCTCTTCTGGGGTTCCTGTCATTGATTTTGGTATAGATAAGGAAAAAGCCTTGGATGTCATAGATAGAGTGGACACACAGAGAGATCATCATCATCCAAGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

636

Amino Acids

70.8

Weight (kDa)

9.05

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3475 PF11961 153 - 209 2.4e-21 Domain of unknown function (DUF3475)
DUF668 PF05003 376 - 459 2.8e-30 Protein of unknown function (DUF668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010330)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 294
Acc36I ACCTGC 1 cut(s) 1141
AccB1I GGYRCC 2 cut(s) 81, 410
AccB7I CCANNNNNTGG 2 cut(s) 63, 844
AccI GTMKAC 1 cut(s) 812
AccII CGCG 1 cut(s) 32
AclWI GGATC 2 cut(s) 346, 686
AcoI YGGCCR 2 cut(s) 168, 435
AcsI RAATTY 1 cut(s) 397
AcuI CTGAAG 2 cut(s) 292, 782
AcyI GRCGYC 2 cut(s) 82, 411
AfaI GTAC 1 cut(s) 1473
AfiI CCNNNNNNNGG 6 cut(s) 34, 63, 68, 440, 563, 844
AgsI TTSAA 6 cut(s) 403, 421, 857, 1031, 1172, 1744
AhlI ACTAGT 2 cut(s) 961, 1480
AjnI CCWGG 1 cut(s) 1638
AleI CACNNNNGTG 3 cut(s) 152, 225, 1532
Alw21I GWGCWC 3 cut(s) 26, 1204, 1305
Alw26I GTCTC 3 cut(s) 1379, 1424, 1510
AlwI GGATC 2 cut(s) 346, 686
AlwNI CAGNNNCTG 1 cut(s) 793
Ama87I CYCGRG 1 cut(s) 656
AoxI GGCC 6 cut(s) 7, 66, 168, 318, 435, 771
ApeKI GCWGC 9 cut(s) 199, 202, 230, 387, 617, 787, 1064, 1364, 1648
ApoI RAATTY 1 cut(s) 397
ArsI GACNNNNNNTTYG 2 cut(s) 704, 736
Asp700I GAANNNNTTC 2 cut(s) 744, 1035
AspLEI GCGC 2 cut(s) 84, 413
AspS9I GGNCC 6 cut(s) 66, 123, 805, 847, 993, 1130
AsuC2I CCSGG 1 cut(s) 1680
AsuHPI GGTGA 3 cut(s) 1024, 1429, 1539
AvaI CYCGRG 1 cut(s) 656
AvaII GGWCC 5 cut(s) 123, 805, 847, 993, 1130
BaeI ACNNNNGTAYC 2 cut(s) 1170, 1203
BanI GGYRCC 2 cut(s) 81, 410
BanII GRGCYC 2 cut(s) 26, 1305
BarI GAAGNNNNNNTAC 8 cut(s) 883, 915, 1455, 1476, 1487, 1508, 1792, 1824
BbsI GAAGAC 1 cut(s) 1675
Bbv12I GWGCWC 3 cut(s) 26, 1204, 1305
BbvCI CCTCAGC 1 cut(s) 1080
BbvI GCAGC 9 cut(s) 211, 214, 217, 399, 629, 799, 1051, 1351, 1635
BccI CCATC 4 cut(s) 272, 1009, 1324, 1446
BceAI ACGGC 1 cut(s) 155
BcgI CGANNNNNNTGC 2 cut(s) 212, 246
BciT130I CCWGG 1 cut(s) 1640
BciVI GTATCC 1 cut(s) 592
BcnI CCSGG 1 cut(s) 1680
BcoDI GTCTC 3 cut(s) 1379, 1424, 1510
BcuI ACTAGT 2 cut(s) 961, 1480
BfaI CTAG 5 cut(s) 210, 962, 1052, 1481, 1719
BfmI CTRYAG 1 cut(s) 1649
BfoI RGCGCY 2 cut(s) 85, 414
BfuAI ACCTGC 1 cut(s) 1141
BfuI GTATCC 1 cut(s) 592
Bme1390I CCNGG 2 cut(s) 1640, 1680
Bme18I GGWCC 5 cut(s) 123, 805, 847, 993, 1130
BmeT110I CYCGRG 1 cut(s) 656
BmgT120I GGNCC 6 cut(s) 66, 123, 805, 847, 993, 1130
BmiI GGNNCC 7 cut(s) 83, 159, 304, 412, 1131, 1677, 1818
BmrFI CCNGG 2 cut(s) 1640, 1680
BmsI GCATC 3 cut(s) 766, 1532, 1635
BoxI GACNNNNGTC 1 cut(s) 803
BpiI GAAGAC 1 cut(s) 1675
Bpu10I CCTNAGC 1 cut(s) 1080
BpuMI CCSGG 1 cut(s) 1680
Bsa29I ATCGAT 2 cut(s) 682, 1176
BsaAI YACGTR 1 cut(s) 344
BsaBI GATNNNNATC 2 cut(s) 455, 1893
BsaHI GRCGYC 2 cut(s) 82, 411
BsaI GGTCTC 1 cut(s) 1510
BsaJI CCNNGG 8 cut(s) 62, 171, 321, 438, 922, 1095, 1854, 1901
BsaWI WCCGGW 2 cut(s) 1191, 1731
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 63, 68, 440, 563, 844
Bse118I RCCGGY 5 cut(s) 68, 166, 407, 413, 433
Bse1I ACTGG 3 cut(s) 774, 808, 1352
Bse8I GATNNNNATC 2 cut(s) 455, 1893
BseBI CCWGG 1 cut(s) 1640
BseCI ATCGAT 2 cut(s) 682, 1176
BseDI CCNNGG 8 cut(s) 62, 171, 321, 438, 922, 1095, 1854, 1901
BseGI GGATG 5 cut(s) 772, 1523, 1660, 1864, 1897
BseJI GATNNNNATC 2 cut(s) 455, 1893
BseLI CCNNNNNNNGG 6 cut(s) 34, 63, 68, 440, 563, 844
BseNI ACTGG 3 cut(s) 774, 808, 1352
BseRI GAGGAG 4 cut(s) 37, 264, 654, 899
BseX3I CGGCCG 1 cut(s) 168
BseXI GCAGC 9 cut(s) 211, 214, 217, 399, 629, 799, 1051, 1351, 1635
BsgI GTGCAG 2 cut(s) 590, 1328
Bsh1236I CGCG 1 cut(s) 32
Bsh1285I CGRYCG 1 cut(s) 171
BshFI GGCC 6 cut(s) 9, 68, 170, 320, 437, 773
BshNI GGYRCC 2 cut(s) 81, 410
BshVI ATCGAT 2 cut(s) 682, 1176
BsiEI CGRYCG 1 cut(s) 171
BsiHKAI GWGCWC 3 cut(s) 26, 1204, 1305
BsiHKCI CYCGRG 1 cut(s) 656
BsiSI CCGG 9 cut(s) 69, 167, 300, 408, 414, 434, 1192, 1680, 1732
BslFI GGGAC 1 cut(s) 1143
BslI CCNNNNNNNGG 6 cut(s) 34, 63, 68, 440, 563, 844
BsmAI GTCTC 3 cut(s) 1379, 1424, 1510
BsmBI CGTCTC 1 cut(s) 1379
BsmFI GGGAC 1 cut(s) 1143
BsmI GAATGC 2 cut(s) 409, 464
BsnI GGCC 6 cut(s) 9, 68, 170, 320, 437, 773
Bso31I GGTCTC 1 cut(s) 1510
BsoBI CYCGRG 1 cut(s) 656
Bsp1286I GDGCHC 3 cut(s) 26, 1204, 1305
Bsp143I GATC 4 cut(s) 338, 691, 1596, 1888
BspANI GGCC 6 cut(s) 9, 68, 170, 320, 437, 773
BspDI ATCGAT 2 cut(s) 682, 1176
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 7 cut(s) 83, 159, 304, 412, 1131, 1677, 1818
BspMAI CTGCAG 1 cut(s) 1653
BspMI ACCTGC 1 cut(s) 1141
BspPI GGATC 2 cut(s) 346, 686
BspQI GCTCTTC 1 cut(s) 1293
BspT107I GGYRCC 2 cut(s) 81, 410
BspTNI GGTCTC 1 cut(s) 1510
BsrFI RCCGGY 5 cut(s) 68, 166, 407, 413, 433
BsrI ACTGG 3 cut(s) 774, 808, 1352
BssAI RCCGGY 5 cut(s) 68, 166, 407, 413, 433
BssECI CCNNGG 8 cut(s) 62, 171, 321, 438, 922, 1095, 1854, 1901
BssMI GATC 4 cut(s) 338, 691, 1596, 1888
BssNAI GTATAC 1 cut(s) 813
BssNI GRCGYC 2 cut(s) 82, 411
BssT1I CCWWGG 6 cut(s) 62, 321, 438, 922, 1854, 1901
Bst1107I GTATAC 1 cut(s) 813
Bst2UI CCWGG 1 cut(s) 1640
Bst4CI ACNGT 6 cut(s) 227, 484, 1096, 1309, 1394, 1757
Bst6I CTCTTC 3 cut(s) 1002, 1293, 1813
BstACI GRCGYC 2 cut(s) 82, 411
BstBAI YACGTR 1 cut(s) 344
BstC8I GCNNGC 7 cut(s) 70, 168, 207, 409, 435, 1241, 1521
BstDSI CCRYGG 2 cut(s) 171, 1095
BstEII GGTNACC 1 cut(s) 1545
BstENI CCTNNNNNAGG 1 cut(s) 561
BstF5I GGATG 5 cut(s) 772, 1523, 1660, 1864, 1897
BstFNI CGCG 1 cut(s) 32
BstH2I RGCGCY 2 cut(s) 85, 414
BstHHI GCGC 2 cut(s) 84, 413
BstKTI GATC 4 cut(s) 341, 694, 1599, 1891
BstMAI GTCTC 3 cut(s) 1379, 1424, 1510
BstMBI GATC 4 cut(s) 338, 691, 1596, 1888
BstMCI CGRYCG 1 cut(s) 171
BstMWI GCNNNNNNNGC 8 cut(s) 41, 50, 140, 199, 376, 434, 461, 1373
BstNI CCWGG 1 cut(s) 1640
BstNSI RCATGY 1 cut(s) 1064
BstPAI GACNNNNGTC 1 cut(s) 803
BstPI GGTNACC 1 cut(s) 1545
BstSCI CCNGG 2 cut(s) 1638, 1678
BstSFI CTRYAG 1 cut(s) 1649
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 9 cut(s) 211, 214, 217, 399, 629, 799, 1051, 1351, 1635
BstV2I GAAGAC 1 cut(s) 1675
BstX2I RGATCY 1 cut(s) 691
BstXI CCANNNNNNTGG 3 cut(s) 154, 1003, 1534
BstYI RGATCY 1 cut(s) 691
BstZ17I GTATAC 1 cut(s) 813
BstZI CGGCCG 1 cut(s) 168
Bsu15I ATCGAT 2 cut(s) 682, 1176
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 6 cut(s) 9, 68, 170, 320, 437, 773
BsuTUI ATCGAT 2 cut(s) 682, 1176
BtgI CCRYGG 2 cut(s) 171, 1095
BtgZI GCGATG 1 cut(s) 445
BtsCI GGATG 5 cut(s) 772, 1523, 1660, 1864, 1897
BtsIMutI CAGTG 5 cut(s) 147, 480, 704, 1305, 1345
BveI ACCTGC 1 cut(s) 1141
Cac8I GCNNGC 7 cut(s) 70, 168, 207, 409, 435, 1241, 1521
CaiI CAGNNNCTG 1 cut(s) 793
CciI TCATGA 1 cut(s) 930
CfoI GCGC 2 cut(s) 84, 413
Cfr10I RCCGGY 5 cut(s) 68, 166, 407, 413, 433
Cfr13I GGNCC 6 cut(s) 66, 123, 805, 847, 993, 1130
ClaI ATCGAT 2 cut(s) 682, 1176
Csp6I GTAC 1 cut(s) 1472
CviAII CATG 6 cut(s) 391, 830, 931, 1061, 1442, 1621
CviQI GTAC 1 cut(s) 1472
DinI GGCGCC 2 cut(s) 83, 412
DpnI GATC 4 cut(s) 340, 693, 1598, 1890
DpnII GATC 4 cut(s) 338, 691, 1596, 1888
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 2 cut(s) 168, 435
EagI CGGCCG 1 cut(s) 168
Eam1104I CTCTTC 3 cut(s) 1002, 1293, 1813
EarI CTCTTC 3 cut(s) 1002, 1293, 1813
EciI GGCGGA 2 cut(s) 40, 1194
Ecl136II GAGCTC 2 cut(s) 24, 1303
EclXI CGGCCG 1 cut(s) 168
Eco130I CCWWGG 6 cut(s) 62, 321, 438, 922, 1854, 1901
Eco147I AGGCCT 1 cut(s) 9
Eco24I GRGCYC 2 cut(s) 26, 1305
Eco31I GGTCTC 1 cut(s) 1510
Eco47I GGWCC 5 cut(s) 123, 805, 847, 993, 1130
Eco52I CGGCCG 1 cut(s) 168
Eco53kI GAGCTC 2 cut(s) 24, 1303
Eco57I CTGAAG 2 cut(s) 292, 782
Eco88I CYCGRG 1 cut(s) 656
Eco91I GGTNACC 1 cut(s) 1545
EcoICRI GAGCTC 2 cut(s) 24, 1303
EcoNI CCTNNNNNAGG 1 cut(s) 561
EcoO109I RGGNCCY 1 cut(s) 1130
EcoO65I GGTNACC 1 cut(s) 1545
EcoRII CCWGG 1 cut(s) 1638
EcoT14I CCWWGG 6 cut(s) 62, 321, 438, 922, 1854, 1901
EcoT38I GRGCYC 2 cut(s) 26, 1305
EgeI GGCGCC 2 cut(s) 83, 412
EheI GGCGCC 2 cut(s) 83, 412
ErhI CCWWGG 6 cut(s) 62, 321, 438, 922, 1854, 1901
Esp3I CGTCTC 1 cut(s) 1379
FaeI CATG 6 cut(s) 394, 833, 934, 1064, 1445, 1624
FaqI GGGAC 1 cut(s) 1143
FatI CATG 6 cut(s) 390, 829, 930, 1060, 1441, 1620
FblI GTMKAC 1 cut(s) 812
FokI GGATG 5 cut(s) 779, 1510, 1667, 1871, 1884
FriOI GRGCYC 2 cut(s) 26, 1305
FspBI CTAG 5 cut(s) 210, 962, 1052, 1481, 1719
GlaI GCGC 2 cut(s) 83, 412
HaeII RGCGCY 2 cut(s) 85, 414
HaeIII GGCC 6 cut(s) 9, 68, 170, 320, 437, 773
HapII CCGG 9 cut(s) 69, 167, 300, 408, 414, 434, 1192, 1680, 1732
HhaI GCGC 2 cut(s) 84, 413
Hin1I GRCGYC 2 cut(s) 82, 411
Hin1II CATG 6 cut(s) 394, 833, 934, 1064, 1445, 1624
Hin6I GCGC 2 cut(s) 82, 411
HinP1I GCGC 2 cut(s) 82, 411
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 1022
HinfI GANTC 4 cut(s) 283, 535, 927, 1420
HpaII CCGG 9 cut(s) 69, 167, 300, 408, 414, 434, 1192, 1680, 1732
HphI GGTGA 3 cut(s) 1024, 1429, 1539
Hpy166II GTNNAC 6 cut(s) 40, 813, 1039, 1397, 1472, 1876
Hpy188III TCNNGA 4 cut(s) 469, 931, 1052, 1697
Hpy8I GTNNAC 6 cut(s) 40, 813, 1039, 1397, 1472, 1876
Hpy99I CGWCG 3 cut(s) 95, 166, 227
HpyAV CCTTC 4 cut(s) 316, 557, 567, 757
HpyCH4III ACNGT 6 cut(s) 227, 484, 1096, 1309, 1394, 1757
HpyCH4IV ACGT 2 cut(s) 343, 871
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 50, 140, 199, 376, 434, 461, 1373
HpySE526I ACGT 2 cut(s) 343, 871
Hsp92I GRCGYC 2 cut(s) 82, 411
Hsp92II CATG 6 cut(s) 394, 833, 934, 1064, 1445, 1624
HspAI GCGC 2 cut(s) 82, 411
KasI GGCGCC 2 cut(s) 81, 410
KroI GCCGGC 4 cut(s) 68, 166, 407, 433
KroNI GCCGGC 4 cut(s) 70, 168, 409, 435
Kzo9I GATC 4 cut(s) 338, 691, 1596, 1888
LguI GCTCTTC 1 cut(s) 1293
Lsp1109I GCAGC 9 cut(s) 211, 214, 217, 399, 629, 799, 1051, 1351, 1635
LweI GCATC 3 cut(s) 766, 1532, 1635
MaeI CTAG 5 cut(s) 210, 962, 1052, 1481, 1719
MaeII ACGT 2 cut(s) 343, 871
MaeIII GTNAC 6 cut(s) 494, 984, 1309, 1545, 1751, 1788
MalI GATC 4 cut(s) 340, 693, 1598, 1890
MboI GATC 4 cut(s) 338, 691, 1596, 1888
MboII GAAGA 7 cut(s) 891, 1019, 1160, 1310, 1680, 1784, 1800
MflI RGATCY 1 cut(s) 691
MhlI GDGCHC 3 cut(s) 26, 1204, 1305
MluCI AATT 7 cut(s) 397, 421, 821, 1274, 1378, 1683, 1784
Mly113I GGCGCC 2 cut(s) 82, 411
MmeI TCCRAC 1 cut(s) 1235
MroNI GCCGGC 4 cut(s) 68, 166, 407, 433
MroXI GAANNNNTTC 2 cut(s) 744, 1035
MseI TTAA 7 cut(s) 489, 531, 645, 966, 974, 1293, 1554
MslI CAYNNNNRTG 3 cut(s) 152, 225, 1532
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 9 cut(s) 69, 167, 300, 408, 414, 434, 1192, 1680, 1732
MspR9I CCNGG 2 cut(s) 1640, 1680
Mva1269I GAATGC 2 cut(s) 409, 464
MvaI CCWGG 1 cut(s) 1640
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 8 cut(s) 41, 50, 140, 199, 376, 434, 461, 1373
NaeI GCCGGC 4 cut(s) 70, 168, 409, 435
NarI GGCGCC 2 cut(s) 82, 411
NciI CCSGG 1 cut(s) 1680
NdeII GATC 4 cut(s) 338, 691, 1596, 1888
NgoMIV GCCGGC 4 cut(s) 68, 166, 407, 433
NlaIII CATG 6 cut(s) 394, 833, 934, 1064, 1445, 1624
NlaIV GGNNCC 7 cut(s) 83, 159, 304, 412, 1131, 1677, 1818
NmuCI GTSAC 3 cut(s) 984, 1309, 1545
NspI RCATGY 1 cut(s) 1064
OliI CACNNNNGTG 3 cut(s) 152, 225, 1532
PagI TCATGA 1 cut(s) 930
PceI AGGCCT 1 cut(s) 9
PciSI GCTCTTC 1 cut(s) 1293
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PctI GAATGC 2 cut(s) 409, 464
PdiI GCCGGC 4 cut(s) 70, 168, 409, 435
PdmI GAANNNNTTC 2 cut(s) 744, 1035
PfeI GAWTC 4 cut(s) 283, 535, 927, 1420
PflMI CCANNNNNTGG 2 cut(s) 63, 844
PfoI TCCNGGA 1 cut(s) 1678
PluTI GGCGCC 2 cut(s) 85, 414
Ppu21I YACGTR 1 cut(s) 344
PpuMI RGGWCCY 1 cut(s) 1130
PshAI GACNNNNGTC 1 cut(s) 803
PsiI TTATAA 1 cut(s) 294
Psp124BI GAGCTC 2 cut(s) 26, 1305
Psp5II RGGWCCY 1 cut(s) 1130
Psp6I CCWGG 1 cut(s) 1638
PspEI GGTNACC 1 cut(s) 1545
PspGI CCWGG 1 cut(s) 1638
PspN4I GGNNCC 7 cut(s) 83, 159, 304, 412, 1131, 1677, 1818
PspPI GGNCC 6 cut(s) 66, 123, 805, 847, 993, 1130
PspPPI RGGWCCY 1 cut(s) 1130
PstI CTGCAG 1 cut(s) 1653
PstNI CAGNNNCTG 1 cut(s) 793
PsuI RGATCY 1 cut(s) 691
PvuII CAGCTG 1 cut(s) 620
RsaI GTAC 1 cut(s) 1473
RsaNI GTAC 1 cut(s) 1472
RseI CAYNNNNRTG 3 cut(s) 152, 225, 1532
SacI GAGCTC 2 cut(s) 26, 1305
SapI GCTCTTC 1 cut(s) 1293
SaqAI TTAA 7 cut(s) 489, 531, 645, 966, 974, 1293, 1554
Sau3AI GATC 4 cut(s) 338, 691, 1596, 1888
Sau96I GGNCC 6 cut(s) 66, 123, 805, 847, 993, 1130
ScrFI CCNGG 2 cut(s) 1640, 1680
SduI GDGCHC 3 cut(s) 26, 1204, 1305
SfaNI GCATC 3 cut(s) 766, 1532, 1635
SfcI CTRYAG 1 cut(s) 1649
SfoI GGCGCC 2 cut(s) 83, 412
SinI GGWCC 5 cut(s) 123, 805, 847, 993, 1130
SmiMI CAYNNNNRTG 3 cut(s) 152, 225, 1532
SpeI ACTAGT 2 cut(s) 961, 1480
Sse9I AATT 7 cut(s) 397, 421, 821, 1274, 1378, 1683, 1784
SseBI AGGCCT 1 cut(s) 9
SspDI GGCGCC 2 cut(s) 81, 410
SspMI CTAG 5 cut(s) 210, 962, 1052, 1481, 1719
SstI GAGCTC 2 cut(s) 26, 1305
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 1638, 1678
StyI CCWWGG 6 cut(s) 62, 321, 438, 922, 1854, 1901
TaaI ACNGT 6 cut(s) 227, 484, 1096, 1309, 1394, 1757
TaiI ACGT 2 cut(s) 346, 874
TaqI TCGA 6 cut(s) 93, 468, 518, 682, 882, 1176
TaqII GACCGA 1 cut(s) 864
TasI AATT 7 cut(s) 397, 421, 821, 1274, 1378, 1683, 1784
TatI WGTACW 1 cut(s) 1471
TauI GCSGC 5 cut(s) 35, 56, 143, 146, 1246
TfiI GAWTC 4 cut(s) 283, 535, 927, 1420
Tru1I TTAA 7 cut(s) 489, 531, 645, 966, 974, 1293, 1554
Tru9I TTAA 7 cut(s) 489, 531, 645, 966, 974, 1293, 1554
TscAI CASTG 5 cut(s) 154, 487, 704, 1312, 1352
TseFI GTSAC 3 cut(s) 984, 1309, 1545
TseI GCWGC 9 cut(s) 199, 202, 230, 387, 617, 787, 1064, 1364, 1648
Tsp45I GTSAC 3 cut(s) 984, 1309, 1545
TspDTI ATGAA 3 cut(s) 882, 885, 1484
TspGWI ACGGA 3 cut(s) 150, 261, 608
TspRI CASTG 5 cut(s) 154, 487, 704, 1312, 1352
Van91I CCANNNNNTGG 2 cut(s) 63, 844
VpaK11BI GGWCC 5 cut(s) 123, 805, 847, 993, 1130
XagI CCTNNNNNAGG 1 cut(s) 561
XapI RAATTY 1 cut(s) 397
XbaI TCTAGA 1 cut(s) 1051
XceI RCATGY 1 cut(s) 1064
XmiI GTMKAC 1 cut(s) 812
XmnI GAANNNNTTC 2 cut(s) 744, 1035
XspI CTAG 5 cut(s) 210, 962, 1052, 1481, 1719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.