No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53470 AT3G53470 |
| fragaria_vesca | FvH4_6g15150 FvH4_6g15150 |
| malus_domestica | MD12G1126200.v1.1 |
| prunus_persica | Prupe.6G242800_v2.0.a1 |
| pyrus_communis | pycom12g12440 |
| rosa_chinensis | RchiOBHm_Chr3g0468451 |
| rosa_laevigata | RLG00000024428 |
| rosa_multiflora | Rmu_sc0040156.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00412750 |
| rosa_rugosa | Rorug03G0095500 |
| rosa_samantha | Rh3AG143800 Rh3BG165800 Rh3DG165400 |
| rosa_wichuraiana | Rw3G013570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 358 |
| AclWI | GGATC | 4 cut(s) | 59, 293, 306, 332 |
| AcsI | RAATTY | 2 cut(s) | 185, 269 |
| AfaI | GTAC | 1 cut(s) | 450 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 348 |
| AgsI | TTSAA | 3 cut(s) | 11, 118, 192 |
| AjnI | CCWGG | 3 cut(s) | 209, 293, 302 |
| AluBI | AGCT | 3 cut(s) | 14, 32, 258 |
| AluI | AGCT | 3 cut(s) | 14, 32, 258 |
| AlwI | GGATC | 4 cut(s) | 59, 293, 306, 332 |
| AoxI | GGCC | 2 cut(s) | 207, 305 |
| ApoI | RAATTY | 2 cut(s) | 185, 269 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 122, 257 |
| AspS9I | GGNCC | 1 cut(s) | 360 |
| AsuHPI | GGTGA | 3 cut(s) | 176, 191, 412 |
| AvaII | GGWCC | 1 cut(s) | 360 |
| BamHI | GGATCC | 1 cut(s) | 298 |
| BccI | CCATC | 2 cut(s) | 350, 460 |
| BciT130I | CCWGG | 3 cut(s) | 211, 295, 304 |
| BfaI | CTAG | 2 cut(s) | 381, 398 |
| Bme1390I | CCNGG | 3 cut(s) | 211, 295, 304 |
| Bme18I | GGWCC | 1 cut(s) | 360 |
| BmgT120I | GGNCC | 1 cut(s) | 360 |
| BmiI | GGNNCC | 3 cut(s) | 142, 300, 406 |
| BmrFI | CCNGG | 3 cut(s) | 211, 295, 304 |
| BmrI | ACTGGG | 1 cut(s) | 29 |
| BmuI | ACTGGG | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 4 cut(s) | 294, 302, 327, 386 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 396, 426 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 348 |
| Bse1I | ACTGG | 1 cut(s) | 24 |
| BseBI | CCWGG | 3 cut(s) | 211, 295, 304 |
| BseDI | CCNNGG | 4 cut(s) | 294, 302, 327, 386 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BseNI | ACTGG | 1 cut(s) | 24 |
| BseYI | CCCAGC | 1 cut(s) | 153 |
| BshFI | GGCC | 2 cut(s) | 209, 307 |
| BslFI | GGGAC | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BsmFI | GGGAC | 1 cut(s) | 215 |
| BsnI | GGCC | 2 cut(s) | 209, 307 |
| Bsp143I | GATC | 3 cut(s) | 51, 298, 337 |
| BspANI | GGCC | 2 cut(s) | 209, 307 |
| BspLI | GGNNCC | 3 cut(s) | 142, 300, 406 |
| BspPI | GGATC | 4 cut(s) | 59, 293, 306, 332 |
| BspQI | GCTCTTC | 2 cut(s) | 239, 248 |
| BsrI | ACTGG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 4 cut(s) | 294, 302, 327, 386 |
| BssMI | GATC | 3 cut(s) | 51, 298, 337 |
| BssT1I | CCWWGG | 1 cut(s) | 386 |
| Bst2UI | CCWGG | 3 cut(s) | 211, 295, 304 |
| Bst4CI | ACNGT | 2 cut(s) | 164, 170 |
| Bst6I | CTCTTC | 2 cut(s) | 239, 248 |
| BstKTI | GATC | 3 cut(s) | 54, 301, 340 |
| BstMBI | GATC | 3 cut(s) | 51, 298, 337 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 255 |
| BstNI | CCWGG | 3 cut(s) | 211, 295, 304 |
| BstSCI | CCNGG | 3 cut(s) | 209, 293, 302 |
| BstX2I | RGATCY | 1 cut(s) | 298 |
| BstYI | RGATCY | 1 cut(s) | 298 |
| BsuRI | GGCC | 2 cut(s) | 209, 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 175 |
| Cfr13I | GGNCC | 1 cut(s) | 360 |
| Csp6I | GTAC | 1 cut(s) | 449 |
| CviJI | RGCY | 8 cut(s) | 14, 32, 141, 209, 258, 307, 384, 407 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 32, 141, 209, 258, 307, 384, 407 |
| CviQI | GTAC | 1 cut(s) | 449 |
| DpnI | GATC | 3 cut(s) | 53, 300, 339 |
| DpnII | GATC | 3 cut(s) | 51, 298, 337 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 358 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 358 |
| Eam1104I | CTCTTC | 2 cut(s) | 239, 248 |
| EarI | CTCTTC | 2 cut(s) | 239, 248 |
| Eco130I | CCWWGG | 1 cut(s) | 386 |
| Eco147I | AGGCCT | 2 cut(s) | 209, 307 |
| Eco47I | GGWCC | 1 cut(s) | 360 |
| EcoRII | CCWGG | 3 cut(s) | 209, 293, 302 |
| EcoT14I | CCWWGG | 1 cut(s) | 386 |
| ErhI | CCWWGG | 1 cut(s) | 386 |
| FaiI | YATR | 3 cut(s) | 288, 371, 376 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 16, 48, 242, 274, 245, 277 |
| FaqI | GGGAC | 1 cut(s) | 215 |
| FspBI | CTAG | 2 cut(s) | 381, 398 |
| GsaI | CCCAGC | 1 cut(s) | 157 |
| HaeIII | GGCC | 2 cut(s) | 209, 307 |
| HphI | GGTGA | 3 cut(s) | 176, 191, 412 |
| Hpy166II | GTNNAC | 2 cut(s) | 393, 436 |
| Hpy188I | TCNGA | 2 cut(s) | 313, 328 |
| Hpy188III | TCNNGA | 4 cut(s) | 49, 223, 265, 346 |
| Hpy8I | GTNNAC | 2 cut(s) | 393, 436 |
| HpyAV | CCTTC | 3 cut(s) | 81, 318, 433 |
| HpyCH4III | ACNGT | 2 cut(s) | 164, 170 |
| HpyCH4V | TGCA | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 255 |
| Kzo9I | GATC | 3 cut(s) | 51, 298, 337 |
| LguI | GCTCTTC | 2 cut(s) | 239, 248 |
| LmnI | GCTCC | 2 cut(s) | 146, 404 |
| MaeI | CTAG | 2 cut(s) | 381, 398 |
| MaeIII | GTNAC | 3 cut(s) | 164, 289, 418 |
| MalI | GATC | 3 cut(s) | 53, 300, 339 |
| MboI | GATC | 3 cut(s) | 51, 298, 337 |
| MflI | RGATCY | 1 cut(s) | 298 |
| MluCI | AATT | 3 cut(s) | 185, 269, 414 |
| MmeI | TCCRAC | 1 cut(s) | 387 |
| MnlI | CCTC | 5 cut(s) | 131, 322, 342, 351, 437 |
| MroXI | GAANNNNTTC | 2 cut(s) | 122, 257 |
| MspR9I | CCNGG | 3 cut(s) | 211, 295, 304 |
| MvaI | CCWGG | 3 cut(s) | 211, 295, 304 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 255 |
| NdeII | GATC | 3 cut(s) | 51, 298, 337 |
| NlaIV | GGNNCC | 3 cut(s) | 142, 300, 406 |
| NmuCI | GTSAC | 3 cut(s) | 164, 289, 418 |
| PceI | AGGCCT | 2 cut(s) | 209, 307 |
| PciSI | GCTCTTC | 2 cut(s) | 239, 248 |
| PdmI | GAANNNNTTC | 2 cut(s) | 122, 257 |
| Psp6I | CCWGG | 3 cut(s) | 209, 293, 302 |
| PspFI | CCCAGC | 1 cut(s) | 153 |
| PspGI | CCWGG | 3 cut(s) | 209, 293, 302 |
| PspN4I | GGNNCC | 3 cut(s) | 142, 300, 406 |
| PspPI | GGNCC | 1 cut(s) | 360 |
| PsuI | RGATCY | 1 cut(s) | 298 |
| RsaI | GTAC | 1 cut(s) | 450 |
| RsaNI | GTAC | 1 cut(s) | 449 |
| SapI | GCTCTTC | 2 cut(s) | 239, 248 |
| Sau3AI | GATC | 3 cut(s) | 51, 298, 337 |
| Sau96I | GGNCC | 1 cut(s) | 360 |
| ScrFI | CCNGG | 3 cut(s) | 211, 295, 304 |
| SinI | GGWCC | 1 cut(s) | 360 |
| Sse9I | AATT | 3 cut(s) | 185, 269, 414 |
| SseBI | AGGCCT | 2 cut(s) | 209, 307 |
| SspMI | CTAG | 2 cut(s) | 381, 398 |
| StuI | AGGCCT | 2 cut(s) | 209, 307 |
| StyD4I | CCNGG | 3 cut(s) | 209, 293, 302 |
| StyI | CCWWGG | 1 cut(s) | 386 |
| TaaI | ACNGT | 2 cut(s) | 164, 170 |
| TaqI | TCGA | 2 cut(s) | 16, 266 |
| TasI | AATT | 3 cut(s) | 185, 269, 414 |
| TscAI | CASTG | 1 cut(s) | 175 |
| TseFI | GTSAC | 3 cut(s) | 164, 289, 418 |
| Tsp45I | GTSAC | 3 cut(s) | 164, 289, 418 |
| TspDTI | ATGAA | 1 cut(s) | 63 |
| TspRI | CASTG | 1 cut(s) | 175 |
| VpaK11BI | GGWCC | 1 cut(s) | 360 |
| XapI | RAATTY | 2 cut(s) | 185, 269 |
| XmnI | GAANNNNTTC | 2 cut(s) | 122, 257 |
| XspI | CTAG | 2 cut(s) | 381, 398 |