Rroxscaffold_6G00413830

Fusaric acid resistance protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0003101
Physical Location & Seq
Forward (+)
36146889 .. 36152282
5394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00413830.1

Sequence Viewer

Length: 2475 bp
ATGAGTCCGGGAAGTGGTACTACTGGCCGGACATGTATGTTGTGGCGTGTGAGGCTACACTCAGCCTTTCATACCATCTTAGCCTGCACCGTAATCTACCTCACCACCCTCTATGCCCCCGAAACTCTCAAACAACTAGTAGCACACCCAGCCTATTCTTACCTGACAACAATCTTAATAGTCTCAGCAGACGCAACTCTTGGTGATGCCTTGAAAGGCTTCTGGCATGCCCTGTATGCTTGTGTTCAGGTTCTAAGTCTCTCAATTTTGAGCCTCCAGCTGATTGGGCCTGCGCTCTTCACCTCCCATGTGATTGCAGCCTTGGCAGTGGCTGTCTCTGCATTTGTTGTGGCATTGCCAGAAGTAACAGACTTGATGTGTAAGCGGATTGCGTTTGGGCAGATTGTGATAGTCTATGTAGGCACTGCTATTCATAGTAGTACTGCAGAGGCTGATCATGATCAGGATGATATGGTACTCATGCACCCAATTCAAGTGGCTTCAAGTACTATGCTCGGAGCATTGGCATCTGTTCTGGCTATGTTGTTTCCGAACCTGGTCTTCTATCATGAAGATTCTTTTCTGGCTATGTTGTCTCCCCACCTTGGCTATCACCAGGTAGGACAAATGTGCCGAAAATATACTGACAATGCCAGGAAAAGGTTGAGCCTTTACTTAGAAGCCGTGGTGCCGCAAGACAGCTTGGCTGCCCTTGACACTATTTCAGAAGCACAGCAGTTGACTATAGTAGGAGAAAAGCTTCTTCACAGTATCAAACAGAAACAGGAAGCCTTGGTGTGGGAGAGACCAGAGATCAGAATCCTAAAACCAAGTTGCATTGATTTGGAAAAGAAATTGCAGGATATAGAAGTACCCTTAAGAGGAATGGAAGTAGCTCTAACTTGTTGCCCTTCATTTCCTGTTGCCATGATTGACAAAGTGCCCAAAGATGCTTTCACCAACATAAAGAGTCGCATAATCCACAAGCTGGAGCAACTTGAGCGCATTTCACCTTTCTACATGACAAAGAAGAAGGGAAATTCCTTAGACTGGTCCTTTTGGACCCTCGAAACCCTTTGTCATAAAGATTTGTCGGCTTTCTTTTATCTTGATTGTCTGAAACTCCTCCAAGAAAATACTGAGGCTATTGAAGAATGCAAGAAGGACACTGAGATTAAAAGTTTCAGTGATTCACAAAATCAAAGCAATAGCAGTATCATAAGGTGCCGGAGCACTCTAGAGCACATGATACCAAGCAAAGCAAGTTTACTTTTTGCATTCAAATGCTCGCTTTCACTAGGTCTTTCTGTGCTATTTGGTTTGATTTATAATGAAAAAGAAGCGTATTGGGCAGGACTCACAATTGCAATAAGTTTTGTCACAGGAAGACAAGCGACATTTACACTTGCCAATGCTCGAGCACAATCAACAGCAATGGGATCAATCTACGGAATCTTGTGCTGTTTTGTTTTCCAAAAGTTTGAGGATCTAAGCTTCTTACCTCTTCTTCCTTGGTTAATATTCACAAGTTTTCTAAGGCACAGCAGGATGTATGGTCAAGCTGGTGGGATATCAGCAGCTGTTGGGGCATTACTAATACTTGGTAGGAAAAATTATGGCCCTCCTATCGATTTCGCAATTGCTAGAATCACAGAGGCTGTAATTGGATTGATCTGTTTCATCACCATAGAGATTCTCTCATGTCATGTAAGAGCAACACCTCTAGCAAAACTTGAACTTTCACATTGCTTGGGAGCTCTTCAAGAATGCATCAAAGATATAGTTCTCTTTGACAATAACCAAAGCAACCTGCAAGCTTCAATCTTTCCAGCATTGAAACAGAAACAGGACAAGTTGAAGTCCCACCTCGATCAATTTGAGAAGTTTTTTGTTGAAGCTGAGTTGGAGCCTAATTTCTGGTTCATCCCTTTCAACAGCGCTTGTTATTGTAAGCTCCTGAGGTCTGTATTAAAGATGGCTGACCTTTTACTTTTTATGTCCAACAAAGTACAATCTCTATCACTGGCATTAAAAAGATTTGAAGTTGCTGCAGAGGACCTCCAAAGCCACATCAAGGGCATGAAGAATGATCTAGATCTTTTCAAGAATATAGTCTGCTCCTCACTTCAATGCCTTCAAGAGTTGTCTTCCAAGAAGTCTCTTGCAGTACATGACAAACATGACATTGAGTTGGGAGCATTACAAGAGGCAAATAAATGTAGGGGTTTGGGTACATATGAGGAAGATGATGAGTGTTCCATTTTAAGTTCTTTTCTTCAACATTCCAACTATGTATTGGATGGAATTGATTCCGGTGAAGGCGAGAAAGATGAGAAGCTTAAGAGCCAGGTGGTTCTGTGTTTGGGTGGCCTAGGATTCTGCATCACTAGTTTGCTGAGGGAAGTGCAAGTGATAGAGAAAGAGTTTCAAGAACTATTCAAATGGGAGAACCCTTCAAGCCATGTTGTAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FUSC FUSC_2

Protein Analysis

824

Amino Acids

91.85

Weight (kDa)

6.2

Isoelectric Point (pI)

49.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FUSC_2 PF13515 436 - 561 9.1e-11 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1329
Acc36I ACCTGC 1 cut(s) 1818
AccB1I GGYRCC 2 cut(s) 688, 1224
AccB7I CCANNNNNTGG 1 cut(s) 988
AciI CCGC 2 cut(s) 385, 692
AclWI GGATC 2 cut(s) 1447, 1494
AcoI YGGCCR 1 cut(s) 25
AcsI RAATTY 1 cut(s) 1039
AfaI GTAC 8 cut(s) 19, 442, 477, 508, 873, 2010, 2169, 2233
AfeI AGCGCT 1 cut(s) 1939
AfiI CCNNNNNNNGG 8 cut(s) 14, 605, 660, 798, 881, 988, 1050, 2074
AflII CTTAAG 2 cut(s) 877, 2339
AflIII ACRYGT 1 cut(s) 32
AhlI ACTAGT 2 cut(s) 136, 2387
AjnI CCWGG 4 cut(s) 555, 615, 653, 2346
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
Alw21I GWGCWC 4 cut(s) 1235, 1245, 1423, 1759
Alw26I GTCTC 6 cut(s) 187, 263, 340, 600, 799, 2163
AlwI GGATC 2 cut(s) 1447, 1494
AlwNI CAGNNNCTG 4 cut(s) 332, 452, 1580, 1658
Ama87I CYCGRG 1 cut(s) 1416
Aor51HI AGCGCT 1 cut(s) 1939
AoxI GGCC 4 cut(s) 25, 287, 1618, 2368
ApeKI GCWGC 4 cut(s) 317, 707, 1577, 2048
ApoI RAATTY 1 cut(s) 1039
Asp700I GAANNNNTTC 3 cut(s) 218, 759, 2308
AspA2I CCTAGG 1 cut(s) 2371
AspLEI GCGC 3 cut(s) 295, 1005, 1940
AspS9I GGNCC 5 cut(s) 287, 1053, 1062, 1619, 2056
AsuC2I CCSGG 1 cut(s) 9
AsuHPI GGTGA 8 cut(s) 94, 215, 292, 605, 949, 1002, 1675, 2327
AvaI CYCGRG 1 cut(s) 1416
AvaII GGWCC 3 cut(s) 1053, 1062, 2056
AvrII CCTAGG 1 cut(s) 2371
AxyI CCTNAGG 1 cut(s) 1958
BaeGI GKGCMC 1 cut(s) 945
BanI GGYRCC 2 cut(s) 688, 1224
BanII GRGCYC 1 cut(s) 1759
BarI GAAGNNNNNNTAC 1 cut(s) 36
BbsI GAAGAC 3 cut(s) 553, 1393, 2139
Bbv12I GWGCWC 4 cut(s) 1235, 1245, 1423, 1759
BbvCI CCTCAGC 1 cut(s) 2396
BbvI GCAGC 4 cut(s) 329, 694, 1589, 2035
BccI CCATC 3 cut(s) 83, 1969, 2294
BceAI ACGGC 1 cut(s) 668
BciT130I CCWGG 4 cut(s) 557, 617, 655, 2348
BclI TGATCA 2 cut(s) 454, 460
BcnI CCSGG 1 cut(s) 9
BcoDI GTCTC 6 cut(s) 187, 263, 340, 600, 799, 2163
BcuI ACTAGT 2 cut(s) 136, 2387
BfaI CTAG 8 cut(s) 137, 1238, 1298, 1644, 1724, 2093, 2372, 2388
BfmI CTRYAG 3 cut(s) 444, 744, 2049
BfoI RGCGCY 1 cut(s) 1941
BfrI CTTAAG 2 cut(s) 877, 2339
BfuAI ACCTGC 1 cut(s) 1818
BglII AGATCT 1 cut(s) 2095
BisI GCNGC 5 cut(s) 318, 692, 708, 1578, 2049
BlnI CCTAGG 1 cut(s) 2371
BlsI GCNGC 5 cut(s) 319, 693, 709, 1579, 2050
BmcAI AGTACT 2 cut(s) 442, 508
Bme1390I CCNGG 5 cut(s) 9, 557, 617, 655, 2348
Bme18I GGWCC 3 cut(s) 1053, 1062, 2056
BmeT110I CYCGRG 1 cut(s) 1416
BmgT120I GGNCC 5 cut(s) 287, 1053, 1062, 1619, 2056
BmiI GGNNCC 4 cut(s) 690, 1064, 1226, 1908
BmrFI CCNGG 5 cut(s) 9, 557, 617, 655, 2348
BmsI GCATC 5 cut(s) 196, 536, 940, 1779, 2391
BpiI GAAGAC 3 cut(s) 553, 1393, 2139
BplI GAGNNNNNCTC 2 cut(s) 1682, 1714
BpmI CTGGAG 2 cut(s) 260, 1010
Bpu10I CCTNAGC 1 cut(s) 2396
BpuEI CTTGAG 1 cut(s) 1019
BpuMI CCSGG 1 cut(s) 9
Bsa29I ATCGAT 1 cut(s) 1629
BsaBI GATNNNNATC 3 cut(s) 459, 818, 2094
BsaI GGTCTC 1 cut(s) 799
BsaJI CCNNGG 6 cut(s) 321, 604, 684, 792, 1511, 2371
BsaWI WCCGGW 1 cut(s) 2312
Bsc4I CCNNNNNNNGG 8 cut(s) 14, 605, 660, 798, 881, 988, 1050, 2074
Bse1I ACTGG 3 cut(s) 28, 1055, 2028
Bse21I CCTNAGG 1 cut(s) 1958
Bse3DI GCAATG 3 cut(s) 353, 1440, 1744
Bse8I GATNNNNATC 3 cut(s) 459, 818, 2094
BseBI CCWGG 4 cut(s) 557, 617, 655, 2348
BseCI ATCGAT 1 cut(s) 1629
BseDI CCNNGG 6 cut(s) 321, 604, 684, 792, 1511, 2371
BseGI GGATG 4 cut(s) 472, 1554, 1923, 2305
BseJI GATNNNNATC 3 cut(s) 459, 818, 2094
BseLI CCNNNNNNNGG 8 cut(s) 14, 605, 660, 798, 881, 988, 1050, 2074
BseMI GCAATG 3 cut(s) 353, 1440, 1744
BseMII CTCAG 7 cut(s) 75, 198, 1131, 1161, 1890, 1949, 2387
BseNI ACTGG 3 cut(s) 28, 1055, 2028
BseRI GAGGAG 2 cut(s) 1115, 2110
BseSI GKGCMC 1 cut(s) 945
BseXI GCAGC 4 cut(s) 329, 694, 1589, 2035
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 70
BshFI GGCC 4 cut(s) 27, 289, 1620, 2370
BshNI GGYRCC 2 cut(s) 688, 1224
BshVI ATCGAT 1 cut(s) 1629
BsiHKAI GWGCWC 4 cut(s) 1235, 1245, 1423, 1759
BsiHKCI CYCGRG 1 cut(s) 1416
BsiSI CCGG 4 cut(s) 8, 28, 1228, 2313
BslFI GGGAC 1 cut(s) 1846
BslI CCNNNNNNNGG 8 cut(s) 14, 605, 660, 798, 881, 988, 1050, 2074
BsmAI GTCTC 6 cut(s) 187, 263, 340, 600, 799, 2163
BsmFI GGGAC 1 cut(s) 1846
BsmI GAATGC 3 cut(s) 1160, 1277, 1772
BsnI GGCC 4 cut(s) 27, 289, 1620, 2370
Bso31I GGTCTC 1 cut(s) 799
BsoBI CYCGRG 1 cut(s) 1416
Bsp1286I GDGCHC 5 cut(s) 945, 1235, 1245, 1423, 1759
Bsp143I GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
BspACI CCGC 2 cut(s) 385, 692
BspANI GGCC 4 cut(s) 27, 289, 1620, 2370
BspCNI CTCAG 7 cut(s) 74, 197, 1132, 1162, 1891, 1950, 2388
BspDI ATCGAT 1 cut(s) 1629
BspHI TCATGA 2 cut(s) 457, 568
BspLI GGNNCC 4 cut(s) 690, 1064, 1226, 1908
BspMAI CTGCAG 2 cut(s) 448, 2053
BspMI ACCTGC 1 cut(s) 1818
BspPI GGATC 2 cut(s) 1447, 1494
BspQI GCTCTTC 2 cut(s) 302, 1764
BspT107I GGYRCC 2 cut(s) 688, 1224
BspTI CTTAAG 2 cut(s) 877, 2339
BspTNI GGTCTC 1 cut(s) 799
BsrDI GCAATG 3 cut(s) 353, 1440, 1744
BsrI ACTGG 3 cut(s) 28, 1055, 2028
BssECI CCNNGG 6 cut(s) 321, 604, 684, 792, 1511, 2371
BssMI GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
BssT1I CCWWGG 5 cut(s) 321, 604, 792, 1511, 2371
Bst2UI CCWGG 4 cut(s) 557, 617, 655, 2348
Bst4CI ACNGT 2 cut(s) 91, 770
Bst6I CTCTTC 3 cut(s) 302, 1509, 1764
BstAFI CTTAAG 2 cut(s) 877, 2339
BstC8I GCNNGC 5 cut(s) 85, 228, 291, 1289, 1815
BstDSI CCRYGG 1 cut(s) 684
BstF5I GGATG 4 cut(s) 472, 1554, 1923, 2305
BstH2I RGCGCY 1 cut(s) 1941
BstHHI GCGC 3 cut(s) 295, 1005, 1940
BstKTI GATC 9 cut(s) 457, 463, 816, 1442, 1489, 1674, 1873, 2092, 2098
BstMAI GTCTC 6 cut(s) 187, 263, 340, 600, 799, 2163
BstMBI GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
BstMWI GCNNNNNNNGC 9 cut(s) 52, 149, 236, 286, 323, 338, 1000, 1349, 1586
BstNI CCWGG 4 cut(s) 557, 617, 655, 2348
BstNSI RCATGY 2 cut(s) 36, 230
BstSCI CCNGG 5 cut(s) 7, 555, 615, 653, 2346
BstSFI CTRYAG 3 cut(s) 444, 744, 2049
BstSLI GKGCMC 1 cut(s) 945
BstV1I GCAGC 4 cut(s) 329, 694, 1589, 2035
BstV2I GAAGAC 3 cut(s) 553, 1393, 2139
BstX2I RGATCY 2 cut(s) 1486, 2095
BstXI CCANNNNNNTGG 1 cut(s) 284
BstYI RGATCY 2 cut(s) 1486, 2095
Bsu15I ATCGAT 1 cut(s) 1629
Bsu36I CCTNAGG 1 cut(s) 1958
BsuRI GGCC 4 cut(s) 27, 289, 1620, 2370
BsuTUI ATCGAT 1 cut(s) 1629
BtgI CCRYGG 1 cut(s) 684
BtsCI GGATG 4 cut(s) 472, 1554, 1923, 2305
BtsI GCAGTG 2 cut(s) 333, 423
BtsIMutI CAGTG 5 cut(s) 333, 423, 1167, 1192, 2021
BveI ACCTGC 1 cut(s) 1818
Cac8I GCNNGC 5 cut(s) 85, 228, 291, 1289, 1815
CaiI CAGNNNCTG 4 cut(s) 332, 452, 1580, 1658
CciI TCATGA 2 cut(s) 457, 568
CfoI GCGC 3 cut(s) 295, 1005, 1940
Cfr13I GGNCC 5 cut(s) 287, 1053, 1062, 1619, 2056
ClaI ATCGAT 1 cut(s) 1629
CseI GACGC 1 cut(s) 200
CsiI ACCWGGT 2 cut(s) 555, 615
Csp6I GTAC 8 cut(s) 18, 441, 476, 507, 872, 2009, 2168, 2232
CspCI CAANNNNNGTGG 2 cut(s) 477, 512
CviQI GTAC 8 cut(s) 18, 441, 476, 507, 872, 2009, 2168, 2232
DpnI GATC 9 cut(s) 456, 462, 815, 1441, 1488, 1673, 1872, 2091, 2097
DpnII GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
EaeI YGGCCR 1 cut(s) 25
Eam1104I CTCTTC 3 cut(s) 302, 1509, 1764
EarI CTCTTC 3 cut(s) 302, 1509, 1764
Ecl136II GAGCTC 1 cut(s) 1757
Eco130I CCWWGG 5 cut(s) 321, 604, 792, 1511, 2371
Eco24I GRGCYC 1 cut(s) 1759
Eco31I GGTCTC 1 cut(s) 799
Eco32I GATATC 1 cut(s) 1572
Eco47I GGWCC 3 cut(s) 1053, 1062, 2056
Eco47III AGCGCT 1 cut(s) 1939
Eco53kI GAGCTC 1 cut(s) 1757
Eco81I CCTNAGG 1 cut(s) 1958
Eco88I CYCGRG 1 cut(s) 1416
EcoICRI GAGCTC 1 cut(s) 1757
EcoO109I RGGNCCY 1 cut(s) 2056
EcoRII CCWGG 4 cut(s) 555, 615, 653, 2346
EcoRV GATATC 1 cut(s) 1572
EcoT14I CCWWGG 5 cut(s) 321, 604, 792, 1511, 2371
EcoT22I ATGCAT 1 cut(s) 1772
EcoT38I GRGCYC 1 cut(s) 1759
ErhI CCWWGG 5 cut(s) 321, 604, 792, 1511, 2371
FaqI GGGAC 1 cut(s) 1846
FauNDI CATATG 1 cut(s) 2236
FbaI TGATCA 2 cut(s) 454, 460
Fnu4HI GCNGC 5 cut(s) 318, 692, 708, 1578, 2049
FokI GGATG 4 cut(s) 479, 1561, 1910, 2312
FriOI GRGCYC 1 cut(s) 1759
Fsp4HI GCNGC 5 cut(s) 318, 692, 708, 1578, 2049
FspBI CTAG 8 cut(s) 137, 1238, 1298, 1644, 1724, 2093, 2372, 2388
GlaI GCGC 3 cut(s) 294, 1004, 1939
GluI GCNGC 5 cut(s) 318, 692, 708, 1578, 2049
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 2 cut(s) 260, 1010
HaeII RGCGCY 1 cut(s) 1941
HaeIII GGCC 4 cut(s) 27, 289, 1620, 2370
HapII CCGG 4 cut(s) 8, 28, 1228, 2313
HgaI GACGC 1 cut(s) 200
HhaI GCGC 3 cut(s) 295, 1005, 1940
Hin6I GCGC 3 cut(s) 293, 1003, 1938
HinP1I GCGC 3 cut(s) 293, 1003, 1938
HincII GTYRAC 1 cut(s) 741
HindII GTYRAC 1 cut(s) 741
HindIII AAGCTT 4 cut(s) 758, 1492, 1815, 2336
HpaII CCGG 4 cut(s) 8, 28, 1228, 2313
HphI GGTGA 8 cut(s) 94, 215, 292, 605, 949, 1002, 1675, 2327
Hpy166II GTNNAC 2 cut(s) 741, 1268
Hpy188I TCNGA 5 cut(s) 518, 552, 727, 818, 1119
Hpy8I GTNNAC 2 cut(s) 741, 1268
HpyAV CCTTC 6 cut(s) 921, 1027, 1156, 2144, 2312, 2463
HpyCH4III ACNGT 2 cut(s) 91, 770
HpyF10VI GCNNNNNNNGC 9 cut(s) 52, 149, 236, 286, 323, 338, 1000, 1349, 1586
HspAI GCGC 3 cut(s) 293, 1003, 1938
Ksp22I TGATCA 2 cut(s) 454, 460
Kzo9I GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
LguI GCTCTTC 2 cut(s) 302, 1764
LmnI GCTCC 8 cut(s) 518, 991, 1230, 1754, 1906, 1959, 2123, 2195
Lsp1109I GCAGC 4 cut(s) 329, 694, 1589, 2035
LweI GCATC 5 cut(s) 196, 536, 940, 1779, 2391
MabI ACCWGGT 2 cut(s) 555, 615
MaeI CTAG 8 cut(s) 137, 1238, 1298, 1644, 1724, 2093, 2372, 2388
MaeIII GTNAC 2 cut(s) 364, 1378
MalI GATC 9 cut(s) 456, 462, 815, 1441, 1488, 1673, 1872, 2091, 2097
MboI GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
MfeI CAATTG 2 cut(s) 1362, 1638
MflI RGATCY 2 cut(s) 1486, 2095
MhlI GDGCHC 5 cut(s) 945, 1235, 1245, 1423, 1759
MlyI GAGTC 3 cut(s) 13, 979, 1350
MmeI TCCRAC 3 cut(s) 1884, 2025, 2310
Mph1103I ATGCAT 1 cut(s) 1772
MroXI GAANNNNTTC 3 cut(s) 218, 759, 2308
MseI TTAA 8 cut(s) 176, 878, 1176, 1517, 1970, 2030, 2264, 2340
MslI CAYNNNNRTG 2 cut(s) 1282, 2128
MspA1I CMGCKG 2 cut(s) 280, 1580
MspCI CTTAAG 2 cut(s) 877, 2339
MspI CCGG 4 cut(s) 8, 28, 1228, 2313
MspR9I CCNGG 5 cut(s) 9, 557, 617, 655, 2348
MunI CAATTG 2 cut(s) 1362, 1638
Mva1269I GAATGC 3 cut(s) 1160, 1277, 1772
MvaI CCWGG 4 cut(s) 557, 617, 655, 2348
MwoI GCNNNNNNNGC 9 cut(s) 52, 149, 236, 286, 323, 338, 1000, 1349, 1586
NciI CCSGG 1 cut(s) 9
NdeI CATATG 1 cut(s) 2236
NdeII GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
NlaIV GGNNCC 4 cut(s) 690, 1064, 1226, 1908
NmuCI GTSAC 1 cut(s) 1378
NsiI ATGCAT 1 cut(s) 1772
NspI RCATGY 2 cut(s) 36, 230
PaeI GCATGC 1 cut(s) 230
PaeR7I CTCGAG 1 cut(s) 1416
PagI TCATGA 2 cut(s) 457, 568
PciI ACATGT 1 cut(s) 32
PciSI GCTCTTC 2 cut(s) 302, 1764
PctI GAATGC 3 cut(s) 1160, 1277, 1772
PdmI GAANNNNTTC 3 cut(s) 218, 759, 2308
PfeI GAWTC 8 cut(s) 575, 819, 1190, 1452, 1647, 1693, 2309, 2376
PflMI CCANNNNNTGG 1 cut(s) 988
PfoI TCCNGGA 1 cut(s) 7
PkrI GCNGC 5 cut(s) 319, 693, 709, 1579, 2050
PleI GAGTC 3 cut(s) 12, 978, 1350
PpsI GAGTC 3 cut(s) 12, 978, 1350
PpuMI RGGWCCY 1 cut(s) 2056
PscI ACATGT 1 cut(s) 32
PsiI TTATAA 1 cut(s) 1329
Psp124BI GAGCTC 1 cut(s) 1759
Psp5II RGGWCCY 1 cut(s) 2056
Psp6I CCWGG 4 cut(s) 555, 615, 653, 2346
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 4 cut(s) 555, 615, 653, 2346
PspN4I GGNNCC 4 cut(s) 690, 1064, 1226, 1908
PspPI GGNCC 5 cut(s) 287, 1053, 1062, 1619, 2056
PspPPI RGGWCCY 1 cut(s) 2056
PspXI VCTCGAGB 1 cut(s) 1416
PstI CTGCAG 2 cut(s) 448, 2053
PstNI CAGNNNCTG 4 cut(s) 332, 452, 1580, 1658
PsuI RGATCY 2 cut(s) 1486, 2095
PvuII CAGCTG 2 cut(s) 280, 1580
RsaI GTAC 8 cut(s) 19, 442, 477, 508, 873, 2010, 2169, 2233
RsaNI GTAC 8 cut(s) 18, 441, 476, 507, 872, 2009, 2168, 2232
RseI CAYNNNNRTG 2 cut(s) 1282, 2128
SacI GAGCTC 1 cut(s) 1759
SapI GCTCTTC 2 cut(s) 302, 1764
SaqAI TTAA 8 cut(s) 176, 878, 1176, 1517, 1970, 2030, 2264, 2340
SatI GCNGC 5 cut(s) 318, 692, 708, 1578, 2049
Sau3AI GATC 9 cut(s) 454, 460, 813, 1439, 1486, 1671, 1870, 2089, 2095
Sau96I GGNCC 5 cut(s) 287, 1053, 1062, 1619, 2056
ScaI AGTACT 2 cut(s) 442, 508
SchI GAGTC 3 cut(s) 13, 979, 1350
ScrFI CCNGG 5 cut(s) 9, 557, 617, 655, 2348
SduI GDGCHC 5 cut(s) 945, 1235, 1245, 1423, 1759
SexAI ACCWGGT 2 cut(s) 555, 615
SfaNI GCATC 5 cut(s) 196, 536, 940, 1779, 2391
SfcI CTRYAG 3 cut(s) 444, 744, 2049
Sfr274I CTCGAG 1 cut(s) 1416
SinI GGWCC 3 cut(s) 1053, 1062, 2056
SlaI CTCGAG 1 cut(s) 1416
SmiMI CAYNNNNRTG 2 cut(s) 1282, 2128
SmlI CTYRAG 4 cut(s) 877, 998, 1416, 2339
SmoI CTYRAG 4 cut(s) 877, 998, 1416, 2339
SpeI ACTAGT 2 cut(s) 136, 2387
SphI GCATGC 1 cut(s) 230
SsiI CCGC 2 cut(s) 385, 692
SspI AATATT 1 cut(s) 1521
SspMI CTAG 8 cut(s) 137, 1238, 1298, 1644, 1724, 2093, 2372, 2388
SstI GAGCTC 1 cut(s) 1759
StyD4I CCNGG 5 cut(s) 7, 555, 615, 653, 2346
StyI CCWWGG 5 cut(s) 321, 604, 792, 1511, 2371
TaaI ACNGT 2 cut(s) 91, 770
TaqI TCGA 4 cut(s) 1068, 1417, 1629, 1869
TatI WGTACW 4 cut(s) 440, 506, 2008, 2167
TauI GCSGC 1 cut(s) 694
TfiI GAWTC 8 cut(s) 575, 819, 1190, 1452, 1647, 1693, 2309, 2376
Tru1I TTAA 8 cut(s) 176, 878, 1176, 1517, 1970, 2030, 2264, 2340
Tru9I TTAA 8 cut(s) 176, 878, 1176, 1517, 1970, 2030, 2264, 2340
TscAI CASTG 5 cut(s) 333, 430, 1174, 1192, 2028
TseFI GTSAC 1 cut(s) 1378
TseI GCWGC 4 cut(s) 317, 707, 1577, 2048
Tsp45I GTSAC 1 cut(s) 1378
TspDTI ATGAA 8 cut(s) 59, 422, 585, 903, 1347, 1669, 1912, 2096
TspGWI ACGGA 1 cut(s) 1464
TspRI CASTG 5 cut(s) 333, 430, 1174, 1192, 2028
Van91I CCANNNNNTGG 1 cut(s) 988
Vha464I CTTAAG 2 cut(s) 877, 2339
VpaK11BI GGWCC 3 cut(s) 1053, 1062, 2056
XapI RAATTY 1 cut(s) 1039
XbaI TCTAGA 2 cut(s) 1237, 2092
XceI RCATGY 2 cut(s) 36, 230
XcmI CCANNNNNNNNNTGG 1 cut(s) 2293
XhoI CTCGAG 1 cut(s) 1416
XmaJI CCTAGG 1 cut(s) 2371
XmnI GAANNNNTTC 3 cut(s) 218, 759, 2308
XspI CTAG 8 cut(s) 137, 1238, 1298, 1644, 1724, 2093, 2372, 2388
ZrmI AGTACT 2 cut(s) 442, 508
Zsp2I ATGCAT 1 cut(s) 1772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.