Rh3CG153700

Fusaric acid resistance protein-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
12824875 .. 12837110
12236 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG153700.1

Sequence Viewer

Length: 4050 bp
ATGGACTCTATCAGAGAAGCGGAGAGTGCCACTGAACTTGAAGCCTTGTGCAAGCAGGATTCTTCTTGGTATCCCTGCCAGGTCTCCCTCAGCTCTACTGAAGATAGCCTAATTGTCGACTTTGGGAGGCAGGAGTTAGAAGATATGGTGTTGGACAAGGATGAAGCACTTACGCGTCTTCGTTTTCGTTCGGCTCCTCTTCAGGGCGACGACTGCTCTCGCATTGAAGGAGAGCATGTTCTTTCCATCCATAAATCACCATATAAGAGCCACTTATATGATGCCAAGGTGGAAAAGGTGACCAGAGTGAGACACTCTACAAGGGTCTATTGCAGATGCAGTTTTATGATTAAGTGGCTTCACCCAGACTTCAAAGGACAGATGGTCACTGTCCCCTCTAGTTCAATCATGAAACTAGCAAGCAAAAGCATCAATTCTCATCCAACTGTTGCTGCATTATTGAAATCAGTTAAGCAAATGGGTTTATATACTGCACCTCCCCTTCCAATCATGCATGAAGACAATGATGTTGAATTCGACCTCAATAAATTATTGGGAAAGCAAATAGAAGAGATCAACATTTCAGCTAATGGAGTCACAAATGAAACTACAGTAGACATATTAGAGGGGGTTAAAGCTGTTGACAATGGACATGTTACTGTGTCCAAAGTAGGCACTTCAAAAGCTCAGGTTTCTCATGACCAGGATCAATTGAAATCTGTTAGTAACAGACCTGGTAACCTGGAAGTAAACATAGAAGATGAGGACCCACAAGCCCCTCTCTCATCCAAACAAGAAGAGCATTCAGAACACAGGTCTCATATTAGTCCTCTTGCTGCCCGTGCAGCTCTGGCCTCCCTAGTGTCGCTTACTCACAAGCATATTGCTATAAGTGGGACTGAACTTTTCAAGTCCAGTGACAGTAATAATATGTCTATTATGGTATCTTCTACTACAATCAAATCTCCAAAAAATGGAAATGCGAACTCAGGTGTTAGAACAACTCTCTCAACAGTTCAGAAAGGTTTTGGAATTCAGAACAGTGATTTGCATGATTCTACTGAAGCCATCGAGTTAAGGGTCTTAACCAACACAGGAAGGTTGACACATTTAGCAGTCAAAGAAGAAAAAGATATATCATCTATGGAAATTAAACAAGGGTCGGAAGAAAGTGGGTCTGCTCAGAGTACAGGATCATATTCTTCTGAAGGAACTGACATTGTTCATGAAAGCAAAGTACTGAGAAAGAAGAATGATATATCAAACAAAGCAGTCTCTTCACCATTTCATTCAGAGAGTAACGGCCCTAAGGAAAATCTGACGTCTGGTGATCTTGAGGCGATTCAAGATGCATATGTTCAGATGAAGACTTGTGCTAAAGACACCAAGTCAAGTGTTTCAACCAACATGAGGAGGTTGACTCGTTCCATGGTCTCTTCTAAAGACAATTTGATAGTTCCTGAAAGCCATGCAGTGGAAAAGGAAAATCGTGAATCAAAAAAGAAGAAAGCTGTCTCTGCGACATCTCATAATGACAGTACACAAGGTGAAGAAAGTAATAGAAAGCACATGTCCGGTGCTGTCAGAAACAGTCGACAAACTGAAGCAAACGCACATCCTCAGCTTGAAAGAGCAAATGTGTATCTTCCCTCTCCTACAAAACAAGTACTCAACGCTCATCAGGCTCTACTTAACCACAAGTTTCTCATTTCATACAATTCCATAAAAATGGAGAACCAAACCCATCCCTTATGGCGCGTGCGATTAGCCGCTGCTCTCCGAACCGCCTTAGCCTGCACCATAGTCGGCTGTGCCACCCTCTACAGCCCGAAACCTATCCGCAATTTCTTAACCTACCCATCTTATTCTTACATGACAACAATCCTTATAGTCTCGGACGCAACCCTCGGCCAGACCCTTATGAGCTGTTGGCACGTGGTCTACGCCACGTGCCAGGTGATGGCTTCTTCCGTGTTGGTCCTGTGGCTGGTTGGACCAGCACGGTTCACTAACGAGGTGGCGGCCTCGGCCATGGCCGTCAGCGTGTTTGTGGTGGCGCTGCCGGGGTCGACGCACTTGATGTCCAAGAGGATCGCGTTTGGGCAGTTTGTGAATGTTTACGTGGGTACTGTTGTTTATGGTGCAAATACTCGGATCGTCGTGCACCCAACTCAGGTGGCGGCGAGTACGGCACTTGGAGCTTTGGCTTCTGTTCTTGCTGTGATGTTTCCATATCCTCGGCTAGCTTACTATGAGGTTAAGAATTCATGGCGTCTTTATGCTGAAAATGCTTCCCAGAGGTTAACTCGATTCGTCGAAGCAATATCTTCCCAAGACAATAGAGTAGCACTTGAATCCATTTCTAAAGGAAAATCTCTTTCCAAAGGAGCAGCTAAGCTTCTTCAAAGTATCAATCATAATCTGGAAGGTATGTTGTGGGAGAGACCAGATATCAAATTTCTAAGACCAAACCATAGGGAATTGGGACATAAGTTGCAAGAAATGGAGATACCAATTAGGGGGATGGAGATGGCTTTATCTTCGTGTTCTTCCTTTCCTGTTGATATGATCGACGAAGGGCTGAGAGATCATTTACGTAACTCACAGCTACAGATAAGCCTAAAACTACTGCAATCTAAGTACCCTGTGCCTTCGGAGGCAACAACAGTTCCAGAAGGTCAGACAAAAATCTTTGACAGGCCCCTTTGGACTAACAAAACCAACACCACAACCCATCAAGATCTCCCAGCTTTGTTCTTCTTGTACTGCATGGAACTCCTCTTAGGTGACCTCCCTATTGCTCGGAATCCCGGATACACTCCAAAATGCAAAGAAAAAAGAGGTGATTCACAGACTCAAGCACAGTGTATCTGCAAAAGGGTCTGGAGAAGCATTAGGCCAAGCCTCGGGAATTTTATTTTTGCCCTCAAGTGCTCAATCGCATTAGGCTTTGCTGTCTTACTTGGTTTGATTTACAACAAGGAGCAAGGATACTGGTCGGGCCTCACCATCGCCATCAGCTTCATAACAGGACGACAAGCGACATTTACAGTTGCGAATGCTAGAGCACAAGGAACAGCACTGGGATCAGTCTATGGAATCATATTTTTATTTCTTTTTCAAAAAGTCGACCAGCTAAGGCTCTTACCGATCTTACCTTGGATTGTTTTCACTCATTTTCTTAGGCATAGCAAGATGTATGGCCAAGCTGGTGGGATCTCAGCGGCAATTGGGGCGTTGCTAATATTAGGTAGAGAAAACTATGGTCAACCAAGTGCCTTTGCAATTGCAAGAATTGCAGAGGCTTGCATTGGACTGACCTGTTTCACTTTAGTAGAGGTTCTTTTTTATCCTATGAGAGCAGCGACCCTAGCAAAAAATCAATTTTCGCAAAGCTTGGGGGCACTTGGAGATTGCGTTCAAGGCATAAACCTCTGTGTACCAGCTTCTACTGGACTGAGAGAAAAGCACCGGAAGCTAAAATCTCATGTCAAAAAACTGGAGACCTTCATTGAAGAAGCTGAAACGGAGCCTAACTTCTGGTTCTTGCCCTTTCAAGGTGATTGTTACAATAGGATCCTAGGATCCATGTCGAAAATGGTGGATCTTCTACCCTTTGTGGCCCGCAACATAGATTTCATCTCACAGAAATCTGAAGGTGCTTCACAGGAGCTAAAACACCATTTGAATATTGATCTGGAGCTTCTAAAAGTGAAGATCGGGTCTTCACTAAAATGCCTTGAGCAGGTGATTTCAACGAAATCCCATGCAGCGTTTGAGAAAGCGGCGCAGAGTGAATACGATAGCGAAATGGGCATATCACCAAACCCGTTTATGATTTTGGGTACATGTGATGAAGAGGCTGACGCCATGGTAATTAATTTCCTACAACATATCAAAGAAGCAGTTGAGAGAGTACATAACAGGGATGGTGAGGTGAAGGATGTAAGCCAAATGGTTCTTTGTTTGAGTAGCCTGGGATTCTGCATCTGGAGTTTGACAGAAGAAACGATGAAGATCAAGGAAGAGGTAAGAAAACTTGTCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1349

Amino Acids

149.36

Weight (kDa)

8.36

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAWADEE PF16719 11 - 137 4.9e-22 SAWADEE domain
FUSC PF04632 973 - 1229 2.6e-15 Fusaric acid resistance protein family
FUSC_2 PF13515 985 - 1109 5.9e-12 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3736
AatII GACGTC 1 cut(s) 1325
Acc36I ACCTGC 1 cut(s) 3736
AccB7I CCANNNNNTGG 3 cut(s) 974, 1474, 1960
AccI GTMKAC 6 cut(s) 117, 615, 1594, 1941, 2069, 3129
AccII CGCG 3 cut(s) 175, 1758, 2096
AciI CCGC 9 cut(s) 20, 1770, 1785, 1840, 2021, 2180, 3224, 3625, 3785
AcoI YGGCCR 4 cut(s) 1909, 2028, 2034, 3202
AcsI RAATTY 5 cut(s) 533, 1032, 2263, 2456, 2911
AcuI CTGAAG 6 cut(s) 120, 185, 1083, 1227, 1623, 3675
AcvI CACGTG 2 cut(s) 1936, 1950
AcyI GRCGYC 3 cut(s) 1322, 2272, 3867
AdeI CACNNNGTG 1 cut(s) 1547
AflIII ACRYGT 4 cut(s) 173, 652, 1569, 3848
AhdI GACNNNNNGTC 2 cut(s) 383, 1387
AjnI CCWGG 6 cut(s) 78, 702, 733, 741, 1953, 3975
AloI GAACNNNNNNTCC 4 cut(s) 222, 254, 3402, 3434
Alw21I GWGCWC 3 cut(s) 2166, 2936, 3070
Alw26I GTCTC 9 cut(s) 88, 304, 822, 1279, 1438, 1519, 1897, 2437, 3497
Alw44I GTGCAC 1 cut(s) 2162
Ama87I CYCGRG 1 cut(s) 2906
ApaLI GTGCAC 1 cut(s) 2162
ApeKI GCWGC 8 cut(s) 452, 836, 845, 1772, 2059, 2390, 3362, 3770
ApoI RAATTY 5 cut(s) 533, 1032, 2263, 2456, 2911
AseI ATTAAT 1 cut(s) 3879
AspA2I CCTAGG 1 cut(s) 3580
AspLEI GCGC 3 cut(s) 1758, 2059, 3790
AspS9I GGNCC 7 cut(s) 766, 1304, 1978, 1994, 2700, 3001, 3622
AsuC2I CCSGG 2 cut(s) 2064, 2811
AsuNHI GCTAGC 1 cut(s) 2242
AvaI CYCGRG 1 cut(s) 2906
AvaII GGWCC 3 cut(s) 766, 1978, 1994
AvrII CCTAGG 1 cut(s) 3580
AxyI CCTNAGG 1 cut(s) 1308
BaeGI GKGCMC 2 cut(s) 2166, 3406
BaeI ACNNNNGTAYC 2 cut(s) 2118, 2151
BalI TGGCCA 1 cut(s) 3204
BamHI GGATCC 2 cut(s) 3576, 3584
BbrPI CACGTG 2 cut(s) 1936, 1950
BbsI GAAGAC 4 cut(s) 170, 525, 1373, 3717
Bbv12I GWGCWC 3 cut(s) 2166, 2936, 3070
BbvCI CCTCAGC 2 cut(s) 89, 1620
BbvI GCAGC 8 cut(s) 439, 823, 857, 1759, 2046, 2402, 3374, 3782
BceAI ACGGC 3 cut(s) 1318, 2021, 2205
BcgI CGANNNNNNTGC 2 cut(s) 1786, 1820
BciT130I CCWGG 6 cut(s) 80, 704, 735, 743, 1955, 3977
BciVI GTATCC 3 cut(s) 81, 2807, 2984
BcnI CCSGG 2 cut(s) 2064, 2811
BcoDI GTCTC 9 cut(s) 88, 304, 822, 1279, 1438, 1519, 1897, 2437, 3497
BfaI CTAG 7 cut(s) 399, 416, 860, 2243, 3063, 3371, 3581
BfmI CTRYAG 3 cut(s) 609, 1822, 2609
BfoI RGCGCY 1 cut(s) 2060
BfuAI ACCTGC 1 cut(s) 3736
BfuI GTATCC 3 cut(s) 81, 2807, 2984
BglII AGATCT 1 cut(s) 2740
BlnI CCTAGG 1 cut(s) 3580
BlpI GCTNAGC 1 cut(s) 2394
BmcAI AGTACT 2 cut(s) 1239, 1668
Bme1390I CCNGG 8 cut(s) 80, 704, 735, 743, 1955, 2064, 2811, 3977
Bme18I GGWCC 3 cut(s) 766, 1978, 1994
BmeRI GACNNNNNGTC 2 cut(s) 383, 1387
BmeT110I CYCGRG 1 cut(s) 2906
BmgT120I GGNCC 7 cut(s) 766, 1304, 1978, 1994, 2700, 3001, 3622
BmiI GGNNCC 6 cut(s) 195, 768, 2702, 3531, 3578, 3586
BmrFI CCNGG 8 cut(s) 80, 704, 735, 743, 1955, 2064, 2811, 3977
BmrI ACTGGG 1 cut(s) 3092
BmsI GCATC 5 cut(s) 271, 326, 438, 1339, 3996
BmtI GCTAGC 1 cut(s) 2246
BmuI ACTGGG 1 cut(s) 3092
BpiI GAAGAC 4 cut(s) 170, 525, 1373, 3717
BplI GAGNNNNNCTC 4 cut(s) 1405, 1437, 2290, 2322
BpmI CTGGAG 4 cut(s) 2905, 3521, 3719, 4012
Bpu10I CCTNAGC 5 cut(s) 89, 687, 1620, 1789, 3137
Bpu1102I GCTNAGC 1 cut(s) 2394
BpuEI CTTGAG 4 cut(s) 1355, 2841, 2912, 3761
BpuMI CCSGG 2 cut(s) 2064, 2811
BsaAI YACGTR 4 cut(s) 1936, 1950, 2122, 2597
BsaBI GATNNNNATC 1 cut(s) 4016
BsaHI GRCGYC 3 cut(s) 1322, 2272, 3867
BsaI GGTCTC 5 cut(s) 88, 822, 1438, 2437, 3497
BsaWI WCCGGW 2 cut(s) 1574, 3471
BsaXI ACNNNNNCTCC 6 cut(s) 222, 252, 481, 511, 3402, 3432
Bse1I ACTGG 5 cut(s) 915, 2999, 3087, 3457, 3504
Bse21I CCTNAGG 1 cut(s) 1308
Bse8I GATNNNNATC 1 cut(s) 4016
BseBI CCWGG 6 cut(s) 80, 704, 735, 743, 1955, 3977
BseGI GGATG 9 cut(s) 166, 246, 439, 785, 1615, 1744, 2529, 3934, 3949
BseJI GATNNNNATC 1 cut(s) 4016
BseNI ACTGG 5 cut(s) 915, 2999, 3087, 3457, 3504
BseRI GAGGAG 3 cut(s) 186, 1426, 2768
BseSI GKGCMC 2 cut(s) 2166, 3406
BseXI GCAGC 8 cut(s) 439, 823, 857, 1759, 2046, 2402, 3374, 3782
BseYI CCCAGC 1 cut(s) 2746
BsgI GTGCAG 3 cut(s) 477, 864, 1780
Bsh1236I CGCG 3 cut(s) 175, 1758, 2096
BsiHKAI GWGCWC 3 cut(s) 2166, 2936, 3070
BsiHKCI CYCGRG 1 cut(s) 2906
BsiSI CCGG 4 cut(s) 1575, 2063, 2811, 3472
BslFI GGGAC 3 cut(s) 377, 910, 2499
BsmAI GTCTC 9 cut(s) 88, 304, 822, 1279, 1438, 1519, 1897, 2437, 3497
BsmFI GGGAC 3 cut(s) 377, 910, 2499
BsmI GAATGC 2 cut(s) 802, 3064
Bso31I GGTCTC 5 cut(s) 88, 822, 1438, 2437, 3497
BsoBI CYCGRG 1 cut(s) 2906
Bsp1286I GDGCHC 4 cut(s) 2166, 2936, 3070, 3406
Bsp1720I GCTNAGC 1 cut(s) 2394
Bsp19I CCATGG 3 cut(s) 1428, 2031, 3870
BspACI CCGC 9 cut(s) 20, 1770, 1785, 1840, 2021, 2180, 3224, 3625, 3785
BspFNI CGCG 3 cut(s) 175, 1758, 2096
BspHI TCATGA 3 cut(s) 408, 697, 1225
BspLI GGNNCC 6 cut(s) 195, 768, 2702, 3531, 3578, 3586
BspMI ACCTGC 1 cut(s) 3736
BspOI GCTAGC 1 cut(s) 2246
BspQI GCTCTTC 1 cut(s) 792
BspTNI GGTCTC 5 cut(s) 88, 822, 1438, 2437, 3497
BsrI ACTGG 5 cut(s) 915, 2999, 3087, 3457, 3504
BssNI GRCGYC 3 cut(s) 1322, 2272, 3867
BssT1I CCWWGG 6 cut(s) 285, 1428, 2031, 3158, 3580, 3870
Bst2UI CCWGG 6 cut(s) 80, 704, 735, 743, 1955, 3977
Bst6I CTCTTC 7 cut(s) 204, 564, 792, 1282, 1441, 3852, 4020
BstACI GRCGYC 3 cut(s) 1322, 2272, 3867
BstAPI GCANNNNNTGC 1 cut(s) 3296
BstBAI YACGTR 4 cut(s) 1936, 1950, 2122, 2597
BstC8I GCNNGC 7 cut(s) 53, 421, 1760, 1795, 2244, 3307, 3625
BstDSI CCRYGG 3 cut(s) 1428, 2031, 3870
BstEII GGTNACC 3 cut(s) 298, 737, 2786
BstENI CCTNNNNNAGG 1 cut(s) 3743
BstF5I GGATG 9 cut(s) 166, 246, 439, 785, 1615, 1744, 2529, 3934, 3949
BstFNI CGCG 3 cut(s) 175, 1758, 2096
BstH2I RGCGCY 1 cut(s) 2060
BstHHI GCGC 3 cut(s) 1758, 2059, 3790
BstMAI GTCTC 9 cut(s) 88, 304, 822, 1279, 1438, 1519, 1897, 2437, 3497
BstNI CCWGG 6 cut(s) 80, 704, 735, 743, 1955, 3977
BstNSI RCATGY 4 cut(s) 239, 656, 1573, 3852
BstPI GGTNACC 3 cut(s) 298, 737, 2786
BstSCI CCNGG 8 cut(s) 78, 702, 733, 741, 1953, 2062, 2809, 3975
BstSFI CTRYAG 3 cut(s) 609, 1822, 2609
BstSLI GKGCMC 2 cut(s) 2166, 3406
BstSNI TACGTA 1 cut(s) 2597
BstUI CGCG 3 cut(s) 175, 1758, 2096
BstV1I GCAGC 8 cut(s) 439, 823, 857, 1759, 2046, 2402, 3374, 3782
BstV2I GAAGAC 4 cut(s) 170, 525, 1373, 3717
BstX2I RGATCY 5 cut(s) 2740, 3216, 3576, 3584, 3604
BstXI CCANNNNNNTGG 2 cut(s) 1729, 3212
BstYI RGATCY 5 cut(s) 2740, 3216, 3576, 3584, 3604
Bsu36I CCTNAGG 1 cut(s) 1308
BsuI GTATCC 3 cut(s) 81, 2807, 2984
BtgI CCRYGG 3 cut(s) 1428, 2031, 3870
BtgZI GCGATG 1 cut(s) 2995
BtsCI GGATG 9 cut(s) 166, 246, 439, 785, 1615, 1744, 2529, 3934, 3949
BtsI GCAGTG 1 cut(s) 1479
BtsIMutI CAGTG 7 cut(s) 30, 387, 922, 1048, 1479, 2870, 3080
BveI ACCTGC 1 cut(s) 3736
Cac8I GCNNGC 7 cut(s) 53, 421, 1760, 1795, 2244, 3307, 3625
CciI TCATGA 3 cut(s) 408, 697, 1225
CfoI GCGC 3 cut(s) 1758, 2059, 3790
Cfr13I GGNCC 7 cut(s) 766, 1304, 1978, 1994, 2700, 3001, 3622
CseI GACGC 5 cut(s) 164, 1907, 2080, 2261, 3875
CsiI ACCWGGT 1 cut(s) 733
CspCI CAANNNNNGTGG 4 cut(s) 19, 54, 2157, 2192
DraIII CACNNNGTG 1 cut(s) 1547
DriI GACNNNNNGTC 2 cut(s) 383, 1387
EaeI YGGCCR 4 cut(s) 1909, 2028, 2034, 3202
Eam1104I CTCTTC 7 cut(s) 204, 564, 792, 1282, 1441, 3852, 4020
Eam1105I GACNNNNNGTC 2 cut(s) 383, 1387
EarI CTCTTC 7 cut(s) 204, 564, 792, 1282, 1441, 3852, 4020
Eco105I TACGTA 1 cut(s) 2597
Eco130I CCWWGG 6 cut(s) 285, 1428, 2031, 3158, 3580, 3870
Eco31I GGTCTC 5 cut(s) 88, 822, 1438, 2437, 3497
Eco32I GATATC 1 cut(s) 2452
Eco47I GGWCC 3 cut(s) 766, 1978, 1994
Eco57I CTGAAG 6 cut(s) 120, 185, 1083, 1227, 1623, 3675
Eco72I CACGTG 2 cut(s) 1936, 1950
Eco81I CCTNAGG 1 cut(s) 1308
Eco88I CYCGRG 1 cut(s) 2906
Eco91I GGTNACC 3 cut(s) 298, 737, 2786
EcoNI CCTNNNNNAGG 1 cut(s) 3743
EcoO109I RGGNCCY 2 cut(s) 766, 2700
EcoO65I GGTNACC 3 cut(s) 298, 737, 2786
EcoRI GAATTC 3 cut(s) 533, 1032, 2263
EcoRII CCWGG 6 cut(s) 78, 702, 733, 741, 1953, 3975
EcoRV GATATC 1 cut(s) 2452
EcoT14I CCWWGG 6 cut(s) 285, 1428, 2031, 3158, 3580, 3870
EcoT22I ATGCAT 2 cut(s) 516, 1354
ErhI CCWWGG 6 cut(s) 285, 1428, 2031, 3158, 3580, 3870
FalI AAGNNNNNCTT 2 cut(s) 257, 289
FaqI GGGAC 3 cut(s) 377, 910, 2499
FauI CCCGC 1 cut(s) 3632
FauNDI CATATG 1 cut(s) 1354
FblI GTMKAC 6 cut(s) 117, 615, 1594, 1941, 2069, 3129
FokI GGATG 9 cut(s) 173, 233, 426, 772, 1602, 1731, 2536, 3941, 3956
FspBI CTAG 7 cut(s) 399, 416, 860, 2243, 3063, 3371, 3581
GlaI GCGC 3 cut(s) 1757, 2058, 3789
GsaI CCCAGC 1 cut(s) 2750
GsuI CTGGAG 4 cut(s) 2905, 3521, 3719, 4012
HaeII RGCGCY 1 cut(s) 2060
HapII CCGG 4 cut(s) 1575, 2063, 2811, 3472
HgaI GACGC 5 cut(s) 164, 1907, 2080, 2261, 3875
HhaI GCGC 3 cut(s) 1758, 2059, 3790
Hin1I GRCGYC 3 cut(s) 1322, 2272, 3867
Hin6I GCGC 3 cut(s) 1756, 2057, 3788
HinP1I GCGC 3 cut(s) 1756, 2057, 3788
HincII GTYRAC 9 cut(s) 118, 643, 1104, 1419, 1595, 2070, 2304, 3130, 3269
HindII GTYRAC 9 cut(s) 118, 643, 1104, 1419, 1595, 2070, 2304, 3130, 3269
HindIII AAGCTT 2 cut(s) 2396, 3394
HpaI GTTAAC 1 cut(s) 2304
HpaII CCGG 4 cut(s) 1575, 2063, 2811, 3472
Hpy99I CGWCG 5 cut(s) 212, 2074, 2162, 2318, 2576
HpyCH4IV ACGT 5 cut(s) 1322, 1935, 1949, 2121, 2596
HpySE526I ACGT 5 cut(s) 1322, 1935, 1949, 2121, 2596
Hsp92I GRCGYC 3 cut(s) 1322, 2272, 3867
HspAI GCGC 3 cut(s) 1756, 2057, 3788
KspAI GTTAAC 1 cut(s) 2304
LguI GCTCTTC 1 cut(s) 792
LmnI GCTCC 7 cut(s) 199, 2198, 2387, 2983, 3529, 3670, 3700
Lsp1109I GCAGC 8 cut(s) 439, 823, 857, 1759, 2046, 2402, 3374, 3782
LweI GCATC 5 cut(s) 271, 326, 438, 1339, 3996
MabI ACCWGGT 1 cut(s) 733
MaeI CTAG 7 cut(s) 399, 416, 860, 2243, 3063, 3371, 3581
MaeII ACGT 5 cut(s) 1322, 1935, 1949, 2121, 2596
MfeI CAATTG 3 cut(s) 710, 3228, 3285
MflI RGATCY 5 cut(s) 2740, 3216, 3576, 3584, 3604
MhlI GDGCHC 4 cut(s) 2166, 2936, 3070, 3406
MlsI TGGCCA 1 cut(s) 3204
MluI ACGCGT 1 cut(s) 173
MluNI TGGCCA 1 cut(s) 3204
MlyI GAGTC 3 cut(s) 603, 1414, 2848
MmeI TCCRAC 4 cut(s) 132, 467, 1143, 1972
Mox20I TGGCCA 1 cut(s) 3204
Mph1103I ATGCAT 2 cut(s) 516, 1354
MscI TGGCCA 1 cut(s) 3204
MslI CAYNNNNRTG 3 cut(s) 276, 1727, 3733
Msp20I TGGCCA 1 cut(s) 3204
MspA1I CMGCKG 2 cut(s) 1772, 3224
MspI CCGG 4 cut(s) 1575, 2063, 2811, 3472
MspR9I CCNGG 8 cut(s) 80, 704, 735, 743, 1955, 2064, 2811, 3977
MunI CAATTG 3 cut(s) 710, 3228, 3285
Mva1269I GAATGC 2 cut(s) 802, 3064
MvaI CCWGG 6 cut(s) 80, 704, 735, 743, 1955, 3977
MvnI CGCG 3 cut(s) 175, 1758, 2096
NciI CCSGG 2 cut(s) 2064, 2811
NcoI CCATGG 3 cut(s) 1428, 2031, 3870
NdeI CATATG 1 cut(s) 1354
NheI GCTAGC 1 cut(s) 2242
NlaIV GGNNCC 6 cut(s) 195, 768, 2702, 3531, 3578, 3586
NmeAIII GCCGAG 3 cut(s) 1887, 2006, 2218
NmuCI GTSAC 5 cut(s) 298, 385, 595, 917, 2786
NsiI ATGCAT 2 cut(s) 516, 1354
NspI RCATGY 4 cut(s) 239, 656, 1573, 3852
PagI TCATGA 3 cut(s) 408, 697, 1225
PaqCI CACCTGC 1 cut(s) 3736
PciI ACATGT 3 cut(s) 652, 1569, 3848
PciSI GCTCTTC 1 cut(s) 792
PctI GAATGC 2 cut(s) 802, 3064
PflMI CCANNNNNTGG 3 cut(s) 974, 1474, 1960
PfoI TCCNGGA 1 cut(s) 2809
PleI GAGTC 3 cut(s) 602, 1414, 2848
PmaCI CACGTG 2 cut(s) 1936, 1950
PmlI CACGTG 2 cut(s) 1936, 1950
PpsI GAGTC 3 cut(s) 602, 1414, 2848
Ppu21I YACGTR 4 cut(s) 1936, 1950, 2122, 2597
PpuMI RGGWCCY 1 cut(s) 766
PscI ACATGT 3 cut(s) 652, 1569, 3848
PshBI ATTAAT 1 cut(s) 3879
Psp5II RGGWCCY 1 cut(s) 766
Psp6I CCWGG 6 cut(s) 78, 702, 733, 741, 1953, 3975
PspCI CACGTG 2 cut(s) 1936, 1950
PspEI GGTNACC 3 cut(s) 298, 737, 2786
PspFI CCCAGC 1 cut(s) 2746
PspGI CCWGG 6 cut(s) 78, 702, 733, 741, 1953, 3975
PspN4I GGNNCC 6 cut(s) 195, 768, 2702, 3531, 3578, 3586
PspPI GGNCC 7 cut(s) 766, 1304, 1978, 1994, 2700, 3001, 3622
PspPPI RGGWCCY 1 cut(s) 766
PsuI RGATCY 5 cut(s) 2740, 3216, 3576, 3584, 3604
RseI CAYNNNNRTG 3 cut(s) 276, 1727, 3733
SalI GTCGAC 4 cut(s) 116, 1593, 2068, 3128
SapI GCTCTTC 1 cut(s) 792
Sau96I GGNCC 7 cut(s) 766, 1304, 1978, 1994, 2700, 3001, 3622
ScaI AGTACT 2 cut(s) 1239, 1668
SchI GAGTC 3 cut(s) 603, 1414, 2848
ScrFI CCNGG 8 cut(s) 80, 704, 735, 743, 1955, 2064, 2811, 3977
SduI GDGCHC 4 cut(s) 2166, 2936, 3070, 3406
SexAI ACCWGGT 1 cut(s) 733
SfaNI GCATC 5 cut(s) 271, 326, 438, 1339, 3996
SfcI CTRYAG 3 cut(s) 609, 1822, 2609
SinI GGWCC 3 cut(s) 766, 1978, 1994
SmiMI CAYNNNNRTG 3 cut(s) 276, 1727, 3733
SmlI CTYRAG 4 cut(s) 1334, 2856, 2927, 3740
SmoI CTYRAG 4 cut(s) 1334, 2856, 2927, 3740
SnaBI TACGTA 1 cut(s) 2597
SsiI CCGC 9 cut(s) 20, 1770, 1785, 1840, 2021, 2180, 3224, 3625, 3785
SspI AATATT 2 cut(s) 3246, 3691
SspMI CTAG 7 cut(s) 399, 416, 860, 2243, 3063, 3371, 3581
StyD4I CCNGG 8 cut(s) 78, 702, 733, 741, 1953, 2062, 2809, 3975
StyI CCWWGG 6 cut(s) 285, 1428, 2031, 3158, 3580, 3870
TaiI ACGT 5 cut(s) 1325, 1938, 1952, 2124, 2599
TatI WGTACW 6 cut(s) 1187, 1237, 1538, 1666, 2763, 3916
TauI GCSGC 5 cut(s) 1772, 2024, 2183, 3227, 3788
TscAI CASTG 7 cut(s) 37, 394, 922, 1048, 1479, 2870, 3087
TseFI GTSAC 5 cut(s) 298, 385, 595, 917, 2786
TseI GCWGC 8 cut(s) 452, 836, 845, 1772, 2059, 2390, 3362, 3770
Tsp45I GTSAC 5 cut(s) 298, 385, 595, 917, 2786
TspGWI ACGGA 2 cut(s) 1960, 3542
TspRI CASTG 7 cut(s) 37, 394, 922, 1048, 1479, 2870, 3087
Van91I CCANNNNNTGG 3 cut(s) 974, 1474, 1960
VneI GTGCAC 1 cut(s) 2162
VpaK11BI GGWCC 3 cut(s) 766, 1978, 1994
VspI ATTAAT 1 cut(s) 3879
XagI CCTNNNNNAGG 1 cut(s) 3743
XapI RAATTY 5 cut(s) 533, 1032, 2263, 2456, 2911
XceI RCATGY 4 cut(s) 239, 656, 1573, 3852
XcmI CCANNNNNNNNNTGG 1 cut(s) 3595
XmaJI CCTAGG 1 cut(s) 3580
XmiI GTMKAC 6 cut(s) 117, 615, 1594, 1941, 2069, 3129
XspI CTAG 7 cut(s) 399, 416, 860, 2243, 3063, 3371, 3581
ZraI GACGTC 1 cut(s) 1323
ZrmI AGTACT 2 cut(s) 1239, 1668
Zsp2I ATGCAT 2 cut(s) 516, 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.