Rroxscaffold_6G00414010

Fusaric acid resistance protein-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
36344763 .. 36348637
3875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00414010.1

Sequence Viewer

Length: 2322 bp
ATGGAGAACCAAACCCATCCCTTATGGCGCGAGCGATTAGCCGCTGCTCTCCGAACCGCCTTAGCCTGCACCATAGTCGGCTGTGCCACCCTCTACAGCCCGAAACCTATCCGCAATTTCTTAACCTACCCATCTTATTCTTACATGACAACAATCCTTATAGTCTCGGACGCAGCGCTCGGCCAGACCCTTATGAGCTGTTGGCACGTGGTCTACGCCACGTGCCAGGTGATGGCTTCTTCCGTGTTGGTCCTGTGGCTGATTGGGCCAGCACGGTTCACTAACGAGGTGGCGGCCGCGGCCATGGCCGTCAGCGTGTTTGTGGTGGCGCTGCCGGGGTCGACGCACTTGACGTCCAAGAGGATCGCGTTTGGGCAGTTTGTGAATGTTTACGTGGGTACTGTTGTTTATGGTACTAATACTCGGATCGTCGTGCACCCAACTCAGGTGGCGGCGAGTACGGCACTTGGAGCTTTGGCTTCTGTTCTTGCTATGATGTTTCCATATCCTCGGCTAGCTTACTATGAGGTTAAGAATTCATGGCGTCTTTATGCTGAAAATGCTTCCCAGAGGTTAACTCGATTCGTCGAAGCAATATCTGCCCAAGACAATAGAGTAGCACTTGAATCCATTTCTAAAGGAAAATCTCTTTCCAAAGGAGCAGCTAAGCTTCTTCAAAGTGTCAATCATAATCTGGAAGGTATGTTGTGGGAGAGACCAGATATCAAATTTCTAAGACCAAACCATAGGGAATTGGGACATAAGTTGCAAGAAATGGAGATACCAATAAAGGGGATGGAGATGGCTTTATCTTCGTGTTCTTCCTTTCCTGTTGATATGATGGACGAAGGGCTGAGAGATCATTTACGTAACTCACAGCTACAGATAAGCCTAAAACTACTGCAATCTAAGTACTCTGTGCCTTCGGAGGCAACAACAGTTCCAGAAGGTCAGACAGAAATCTTTGACAAGCCCCTTTGGACTAACAAAACCAACACCACAACCCATCAAGATCTCCCAGCTTTGTTCTTCTTGTACTGCATGGAACTCCTCTTAGGTGACCTCCCTATTGCTCGGAATCCCGGAAACACTCCAAAATGCAAAGAAAAAAGAGGTGATTCACAGACTCAAGAACAGTGTATCTGCAAAAGGGTCTGGAGAAGCATTAGGCCAAGCATCGGGAATTTTATTTTTGCCCTCAAGTGCTCAATCGCATTAGGCTTTGCTGTGTTACTTGGTTTGATTTACAACAAGGAGCAAGGATACTGGTCGGGCCTCACCATCGCCATCAGCTTCATAACAGGACGACAAGCGACATTTACAGTTGCGAATGCTAGAGCACAAGGAACAGCACTGGGATCAGTCTATGGAATCATATTTTTATTTCTTTTTCAAAAAGTCGACCAGCTAAGGCTCTTACCGATCTTACCTTGGATTGTTTTTACTCATTTTCTTAGGCATAGCAAGATGTATGGCCAAGCTGGTGGGATCTCAGCGGCAATTGGGGCGTTGCTAATCTTAGGTAGAGAAAACTATGGTCAACCAAGTGCCTTTGCAATTGCAAGAATTGCAGAGGCTTGCATTGGACTGACCTGTTTCACTTTAGTAGAGGTTCTTTTTTATCCTATGAGAGCAGCGACCCTAGCGAAAAATCAATTTTCGCAAAGCTTGGGGGCACTTGGAGATTGCGTCCAAGGCATAAACCTCTGTGTACCAGCTTCTACTGGACTGAGAGAAAAGCACAGGAAGCTAAAATCTCATGTCAAAAAACTGGAGACCTTCATTGAAGAAGCTGAAACGGAGCCTAACTTCTGGTTCTTGCCCTTTCACAGTGATTGTTACAATAGGATCCTAGGATCCATGTCGAAAATGGTGGATCTTCTACCCTTTGTGGCCCACAACATAGACTTCATCTCACAGAAATCTGAAGCTGCTTCACAGGAGCTAAAACACAATATGAATACTGATCTGGAGCTTCTAAAAGTGAAGATCGGGTCTTCACTAAAATGCCTTGAGCAGGTGATTTCGATGAAATCCCTTGCAGCGTTTGAGAAAGAGGCGCAGAGCAAATACGATAGCGAAATGGGCACATCACCAAACCCGTTTATGATTTTGGGTACATGTGATGAAGAGGCTGACGCCATGGTAAGTAATCTCCTTCAACATATCAAAGAAGCAGTTAAGAGAGTACATAACAGGGATGGTGATGTGAAGGATGTGAACCAAATGGTTCTTTGTTTGAGTAGCCTGGGATTCTGCATCCGGAGTTTGACAGAAGAAACGATGAAGATCAAGGAAGAAGTAAGAAAACTTGCCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

773

Amino Acids

85.91

Weight (kDa)

8.79

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FUSC PF04632 397 - 666 5.6e-16 Fusaric acid resistance protein family
FUSC_2 PF13515 409 - 533 2.7e-12 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2008
AatII GACGTC 1 cut(s) 356
Acc36I ACCTGC 1 cut(s) 2008
AccB7I CCANNNNNTGG 1 cut(s) 232
AccI GTMKAC 3 cut(s) 213, 341, 1401
AccII CGCG 3 cut(s) 30, 299, 368
AccIII TCCGGA 1 cut(s) 2262
AciI CCGC 8 cut(s) 42, 57, 112, 293, 297, 299, 452, 1496
AclWI GGATC 9 cut(s) 371, 434, 1366, 1496, 1843, 1851, 1856, 1864, 1884
AcoI YGGCCR 5 cut(s) 181, 294, 300, 306, 1474
AcsI RAATTY 3 cut(s) 535, 728, 1183
AcuI CTGAAG 1 cut(s) 1947
AcvI CACGTG 2 cut(s) 208, 222
AcyI GRCGYC 3 cut(s) 353, 544, 2139
AfaI GTAC 8 cut(s) 400, 415, 460, 914, 1037, 1713, 2119, 2190
AfeI AGCGCT 1 cut(s) 177
AfiI CCNNNNNNNGG 5 cut(s) 232, 445, 791, 1178, 2017
AflIII ACRYGT 1 cut(s) 2120
AgsI TTSAA 5 cut(s) 626, 677, 1394, 1787, 2162
AjnI CCWGG 2 cut(s) 225, 2247
Alw21I GWGCWC 3 cut(s) 438, 1208, 1342
Alw26I GTCTC 3 cut(s) 169, 709, 1769
Alw44I GTGCAC 1 cut(s) 434
AlwI GGATC 9 cut(s) 371, 434, 1366, 1496, 1843, 1851, 1856, 1864, 1884
Aor13HI TCCGGA 1 cut(s) 2262
Aor51HI AGCGCT 1 cut(s) 177
AoxI GGCC 9 cut(s) 181, 266, 294, 300, 306, 1169, 1273, 1474, 1893
ApaLI GTGCAC 1 cut(s) 434
ApeKI GCWGC 7 cut(s) 44, 173, 331, 662, 1634, 1931, 2042
ApoI RAATTY 3 cut(s) 535, 728, 1183
AspA2I CCTAGG 1 cut(s) 1852
AspLEI GCGC 4 cut(s) 30, 178, 331, 2062
AspS9I GGNCC 4 cut(s) 250, 266, 1273, 1894
AsuC2I CCSGG 2 cut(s) 336, 1083
AsuHPI GGTGA 7 cut(s) 241, 1070, 1127, 1270, 2032, 2085, 2216
AsuNHI GCTAGC 1 cut(s) 514
AvaII GGWCC 1 cut(s) 250
AvrII CCTAGG 1 cut(s) 1852
BaeGI GKGCMC 3 cut(s) 438, 1678, 2090
BaeI ACNNNNGTAYC 2 cut(s) 390, 423
BalI TGGCCA 1 cut(s) 1476
BamHI GGATCC 2 cut(s) 1848, 1856
BbrPI CACGTG 2 cut(s) 208, 222
BbsI GAAGAC 1 cut(s) 1989
Bbv12I GWGCWC 3 cut(s) 438, 1208, 1342
BbvI GCAGC 7 cut(s) 31, 185, 318, 674, 1646, 1918, 2054
BceAI ACGGC 2 cut(s) 293, 477
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BciT130I CCWGG 2 cut(s) 227, 2249
BciVI GTATCC 1 cut(s) 1256
BcnI CCSGG 2 cut(s) 336, 1083
BcoDI GTCTC 3 cut(s) 169, 709, 1769
BfaI CTAG 4 cut(s) 515, 1335, 1643, 1853
BfmI CTRYAG 2 cut(s) 94, 881
BfoI RGCGCY 2 cut(s) 179, 332
BfuAI ACCTGC 1 cut(s) 2008
BfuI GTATCC 1 cut(s) 1256
BglII AGATCT 1 cut(s) 1012
BlnI CCTAGG 1 cut(s) 1852
BlpI GCTNAGC 1 cut(s) 666
BmcAI AGTACT 1 cut(s) 914
Bme1390I CCNGG 4 cut(s) 227, 336, 1083, 2249
Bme18I GGWCC 1 cut(s) 250
BmgT120I GGNCC 4 cut(s) 250, 266, 1273, 1894
BmiI GGNNCC 3 cut(s) 1803, 1850, 1858
BmrFI CCNGG 4 cut(s) 227, 336, 1083, 2249
BmrI ACTGGG 1 cut(s) 1364
BmsI GCATC 2 cut(s) 1185, 2268
BmtI GCTAGC 1 cut(s) 518
BmuI ACTGGG 1 cut(s) 1364
BpiI GAAGAC 1 cut(s) 1989
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 3 cut(s) 1177, 1793, 1991
Bpu10I CCTNAGC 2 cut(s) 61, 1409
Bpu1102I GCTNAGC 1 cut(s) 666
BpuEI CTTGAG 3 cut(s) 1113, 1184, 2033
BpuMI CCSGG 2 cut(s) 336, 1083
BsaAI YACGTR 4 cut(s) 208, 222, 394, 869
BsaBI GATNNNNATC 1 cut(s) 2288
BsaHI GRCGYC 3 cut(s) 353, 544, 2139
BsaI GGTCTC 2 cut(s) 709, 1769
BsaJI CCNNGG 9 cut(s) 297, 303, 335, 509, 1430, 1693, 1852, 2142, 2248
BsaWI WCCGGW 1 cut(s) 2262
BsaXI ACNNNNNCTCC 2 cut(s) 1674, 1704
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 445, 791, 1178, 2017
Bse1I ACTGG 4 cut(s) 1271, 1359, 1729, 1776
Bse8I GATNNNNATC 1 cut(s) 2288
BseAI TCCGGA 1 cut(s) 2262
BseBI CCWGG 2 cut(s) 227, 2249
BseDI CCNNGG 9 cut(s) 297, 303, 335, 509, 1430, 1693, 1852, 2142, 2248
BseGI GGATG 5 cut(s) 16, 801, 2206, 2221, 2259
BseJI GATNNNNATC 1 cut(s) 2288
BseLI CCNNNNNNNGG 5 cut(s) 232, 445, 791, 1178, 2017
BseMII CTCAG 4 cut(s) 458, 845, 1506, 1721
BseNI ACTGG 4 cut(s) 1271, 1359, 1729, 1776
BseRI GAGGAG 1 cut(s) 1040
BseSI GKGCMC 3 cut(s) 438, 1678, 2090
BseX3I CGGCCG 1 cut(s) 294
BseXI GCAGC 7 cut(s) 31, 185, 318, 674, 1646, 1918, 2054
BseYI CCCAGC 1 cut(s) 1018
BsgI GTGCAG 1 cut(s) 52
Bsh1236I CGCG 3 cut(s) 30, 299, 368
Bsh1285I CGRYCG 1 cut(s) 297
BshFI GGCC 9 cut(s) 183, 268, 296, 302, 308, 1171, 1275, 1476, 1895
BsiEI CGRYCG 1 cut(s) 297
BsiHKAI GWGCWC 3 cut(s) 438, 1208, 1342
BsiSI CCGG 3 cut(s) 335, 1083, 2263
BslFI GGGAC 1 cut(s) 771
BslI CCNNNNNNNGG 5 cut(s) 232, 445, 791, 1178, 2017
BsmAI GTCTC 3 cut(s) 169, 709, 1769
BsmFI GGGAC 1 cut(s) 771
BsmI GAATGC 1 cut(s) 1336
BsnI GGCC 9 cut(s) 183, 268, 296, 302, 308, 1171, 1275, 1476, 1895
Bso31I GGTCTC 2 cut(s) 709, 1769
Bsp1286I GDGCHC 5 cut(s) 438, 1208, 1342, 1678, 2090
Bsp13I TCCGGA 1 cut(s) 2262
Bsp1720I GCTNAGC 1 cut(s) 666
Bsp19I CCATGG 2 cut(s) 303, 2142
BspACI CCGC 8 cut(s) 42, 57, 112, 293, 297, 299, 452, 1496
BspANI GGCC 9 cut(s) 183, 268, 296, 302, 308, 1171, 1275, 1476, 1895
BspCNI CTCAG 4 cut(s) 457, 846, 1505, 1722
BspEI TCCGGA 1 cut(s) 2262
BspFNI CGCG 3 cut(s) 30, 299, 368
BspLI GGNNCC 3 cut(s) 1803, 1850, 1858
BspMI ACCTGC 1 cut(s) 2008
BspOI GCTAGC 1 cut(s) 518
BspPI GGATC 9 cut(s) 371, 434, 1366, 1496, 1843, 1851, 1856, 1864, 1884
BspTNI GGTCTC 2 cut(s) 709, 1769
BsrI ACTGG 4 cut(s) 1271, 1359, 1729, 1776
BssECI CCNNGG 9 cut(s) 297, 303, 335, 509, 1430, 1693, 1852, 2142, 2248
BssNI GRCGYC 3 cut(s) 353, 544, 2139
BssT1I CCWWGG 5 cut(s) 303, 1430, 1693, 1852, 2142
Bst2UI CCWGG 2 cut(s) 227, 2249
Bst4CI ACNGT 6 cut(s) 276, 403, 940, 1137, 1324, 1832
Bst6I CTCTTC 1 cut(s) 2124
BstACI GRCGYC 3 cut(s) 353, 544, 2139
BstAPI GCANNNNNTGC 2 cut(s) 599, 1568
BstBAI YACGTR 4 cut(s) 208, 222, 394, 869
BstC8I GCNNGC 5 cut(s) 32, 67, 270, 516, 1579
BstDSI CCRYGG 3 cut(s) 297, 303, 2142
BstEII GGTNACC 1 cut(s) 1058
BstENI CCTNNNNNAGG 1 cut(s) 2015
BstF5I GGATG 5 cut(s) 16, 801, 2206, 2221, 2259
BstFNI CGCG 3 cut(s) 30, 299, 368
BstH2I RGCGCY 2 cut(s) 179, 332
BstHHI GCGC 4 cut(s) 30, 178, 331, 2062
BstMAI GTCTC 3 cut(s) 169, 709, 1769
BstMCI CGRYCG 1 cut(s) 297
BstNI CCWGG 2 cut(s) 227, 2249
BstNSI RCATGY 1 cut(s) 2124
BstPI GGTNACC 1 cut(s) 1058
BstSCI CCNGG 4 cut(s) 225, 334, 1081, 2247
BstSFI CTRYAG 2 cut(s) 94, 881
BstSLI GKGCMC 3 cut(s) 438, 1678, 2090
BstSNI TACGTA 1 cut(s) 869
BstUI CGCG 3 cut(s) 30, 299, 368
BstV1I GCAGC 7 cut(s) 31, 185, 318, 674, 1646, 1918, 2054
BstV2I GAAGAC 1 cut(s) 1989
BstX2I RGATCY 5 cut(s) 1012, 1488, 1848, 1856, 1876
BstXI CCANNNNNNTGG 1 cut(s) 1484
BstYI RGATCY 5 cut(s) 1012, 1488, 1848, 1856, 1876
BstZI CGGCCG 1 cut(s) 294
BsuI GTATCC 1 cut(s) 1256
BsuRI GGCC 9 cut(s) 183, 268, 296, 302, 308, 1171, 1275, 1476, 1895
BtgI CCRYGG 3 cut(s) 297, 303, 2142
BtgZI GCGATG 1 cut(s) 1267
BtsCI GGATG 5 cut(s) 16, 801, 2206, 2221, 2259
BtsIMutI CAGTG 3 cut(s) 1142, 1352, 1837
BveI ACCTGC 1 cut(s) 2008
Cac8I GCNNGC 5 cut(s) 32, 67, 270, 516, 1579
CciNI GCGGCCGC 1 cut(s) 294
CfoI GCGC 4 cut(s) 30, 178, 331, 2062
Cfr13I GGNCC 4 cut(s) 250, 266, 1273, 1894
Cfr42I CCGCGG 1 cut(s) 300
CseI GACGC 5 cut(s) 179, 352, 533, 1678, 2147
Csp6I GTAC 8 cut(s) 399, 414, 459, 913, 1036, 1712, 2118, 2189
CspCI CAANNNNNGTGG 2 cut(s) 429, 464
CviAII CATG 8 cut(s) 145, 304, 540, 1042, 1760, 1861, 2121, 2143
CviQI GTAC 8 cut(s) 399, 414, 459, 913, 1036, 1712, 2118, 2189
EaeI YGGCCR 5 cut(s) 181, 294, 300, 306, 1474
EagI CGGCCG 1 cut(s) 294
Eam1104I CTCTTC 1 cut(s) 2124
EarI CTCTTC 1 cut(s) 2124
EclXI CGGCCG 1 cut(s) 294
Eco105I TACGTA 1 cut(s) 869
Eco130I CCWWGG 5 cut(s) 303, 1430, 1693, 1852, 2142
Eco31I GGTCTC 2 cut(s) 709, 1769
Eco32I GATATC 1 cut(s) 724
Eco47I GGWCC 1 cut(s) 250
Eco47III AGCGCT 1 cut(s) 177
Eco52I CGGCCG 1 cut(s) 294
Eco57I CTGAAG 1 cut(s) 1947
Eco72I CACGTG 2 cut(s) 208, 222
Eco91I GGTNACC 1 cut(s) 1058
EcoNI CCTNNNNNAGG 1 cut(s) 2015
EcoO65I GGTNACC 1 cut(s) 1058
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 2 cut(s) 225, 2247
EcoRV GATATC 1 cut(s) 724
EcoT14I CCWWGG 5 cut(s) 303, 1430, 1693, 1852, 2142
ErhI CCWWGG 5 cut(s) 303, 1430, 1693, 1852, 2142
FaeI CATG 8 cut(s) 148, 307, 543, 1045, 1763, 1864, 2124, 2146
FaqI GGGAC 1 cut(s) 771
FatI CATG 8 cut(s) 144, 303, 539, 1041, 1759, 1860, 2120, 2142
FblI GTMKAC 3 cut(s) 213, 341, 1401
FokI GGATG 5 cut(s) 3, 808, 2213, 2228, 2246
FspBI CTAG 4 cut(s) 515, 1335, 1643, 1853
GlaI GCGC 4 cut(s) 29, 177, 330, 2061
GsaI CCCAGC 1 cut(s) 1022
GsuI CTGGAG 3 cut(s) 1177, 1793, 1991
HaeII RGCGCY 2 cut(s) 179, 332
HaeIII GGCC 9 cut(s) 183, 268, 296, 302, 308, 1171, 1275, 1476, 1895
HapII CCGG 3 cut(s) 335, 1083, 2263
HgaI GACGC 5 cut(s) 179, 352, 533, 1678, 2147
HhaI GCGC 4 cut(s) 30, 178, 331, 2062
Hin1I GRCGYC 3 cut(s) 353, 544, 2139
Hin1II CATG 8 cut(s) 148, 307, 543, 1045, 1763, 1864, 2124, 2146
Hin6I GCGC 4 cut(s) 28, 176, 329, 2060
HinP1I GCGC 4 cut(s) 28, 176, 329, 2060
HincII GTYRAC 4 cut(s) 342, 576, 1402, 1541
HindII GTYRAC 4 cut(s) 342, 576, 1402, 1541
HindIII AAGCTT 2 cut(s) 668, 1666
HinfI GANTC 7 cut(s) 582, 626, 1078, 1118, 1126, 1371, 2253
HpaI GTTAAC 1 cut(s) 576
HpaII CCGG 3 cut(s) 335, 1083, 2263
HphI GGTGA 7 cut(s) 241, 1070, 1127, 1270, 2032, 2085, 2216
Hpy188I TCNGA 7 cut(s) 53, 169, 426, 928, 954, 1077, 1927
Hpy188III TCNNGA 8 cut(s) 695, 944, 1010, 1130, 1156, 1180, 1970, 2263
Hpy99I CGWCG 3 cut(s) 346, 434, 590
HpyAV CCTTC 7 cut(s) 692, 842, 933, 941, 1789, 2168, 2206
HpyCH4III ACNGT 6 cut(s) 276, 403, 940, 1137, 1324, 1832
HpyCH4IV ACGT 5 cut(s) 207, 221, 353, 393, 868
HpySE526I ACGT 5 cut(s) 207, 221, 353, 393, 868
Hsp92I GRCGYC 3 cut(s) 353, 544, 2139
Hsp92II CATG 8 cut(s) 148, 307, 543, 1045, 1763, 1864, 2124, 2146
HspAI GCGC 4 cut(s) 28, 176, 329, 2060
Kpn2I TCCGGA 1 cut(s) 2262
KspAI GTTAAC 1 cut(s) 576
KspI CCGCGG 1 cut(s) 300
LmnI GCTCC 6 cut(s) 470, 659, 1255, 1801, 1942, 1972
Lsp1109I GCAGC 7 cut(s) 31, 185, 318, 674, 1646, 1918, 2054
LweI GCATC 2 cut(s) 1185, 2268
MaeI CTAG 4 cut(s) 515, 1335, 1643, 1853
MaeII ACGT 5 cut(s) 207, 221, 353, 393, 868
MaeIII GTNAC 4 cut(s) 869, 1058, 1230, 1838
MfeI CAATTG 2 cut(s) 1500, 1557
MflI RGATCY 5 cut(s) 1012, 1488, 1848, 1856, 1876
MhlI GDGCHC 5 cut(s) 438, 1208, 1342, 1678, 2090
MlsI TGGCCA 1 cut(s) 1476
MluCI AATT 9 cut(s) 115, 535, 728, 752, 1183, 1500, 1557, 1566, 1655
MluNI TGGCCA 1 cut(s) 1476
MlyI GAGTC 1 cut(s) 1120
Mox20I TGGCCA 1 cut(s) 1476
MroI TCCGGA 1 cut(s) 2262
MscI TGGCCA 1 cut(s) 1476
MseI TTAA 4 cut(s) 122, 531, 575, 2181
MslI CAYNNNNRTG 1 cut(s) 2005
Msp20I TGGCCA 1 cut(s) 1476
MspA1I CMGCKG 3 cut(s) 44, 299, 1496
MspI CCGG 3 cut(s) 335, 1083, 2263
MspR9I CCNGG 4 cut(s) 227, 336, 1083, 2249
MunI CAATTG 2 cut(s) 1500, 1557
Mva1269I GAATGC 1 cut(s) 1336
MvaI CCWGG 2 cut(s) 227, 2249
MvnI CGCG 3 cut(s) 30, 299, 368
NciI CCSGG 2 cut(s) 336, 1083
NcoI CCATGG 2 cut(s) 303, 2142
NheI GCTAGC 1 cut(s) 514
NlaIII CATG 8 cut(s) 148, 307, 543, 1045, 1763, 1864, 2124, 2146
NlaIV GGNNCC 3 cut(s) 1803, 1850, 1858
NmeAIII GCCGAG 2 cut(s) 159, 490
NmuCI GTSAC 1 cut(s) 1058
NotI GCGGCCGC 1 cut(s) 294
NspI RCATGY 1 cut(s) 2124
PaqCI CACCTGC 1 cut(s) 2008
PciI ACATGT 1 cut(s) 2120
PcsI WCGNNNNNNNCGW 1 cut(s) 350
PctI GAATGC 1 cut(s) 1336
PfeI GAWTC 6 cut(s) 582, 626, 1078, 1118, 1371, 2253
PflMI CCANNNNNTGG 1 cut(s) 232
PfoI TCCNGGA 1 cut(s) 1081
PleI GAGTC 1 cut(s) 1120
PmaCI CACGTG 2 cut(s) 208, 222
PmlI CACGTG 2 cut(s) 208, 222
PpsI GAGTC 1 cut(s) 1120
Ppu21I YACGTR 4 cut(s) 208, 222, 394, 869
PscI ACATGT 1 cut(s) 2120
Psp6I CCWGG 2 cut(s) 225, 2247
PspCI CACGTG 2 cut(s) 208, 222
PspEI GGTNACC 1 cut(s) 1058
PspFI CCCAGC 1 cut(s) 1018
PspGI CCWGG 2 cut(s) 225, 2247
PspN4I GGNNCC 3 cut(s) 1803, 1850, 1858
PspPI GGNCC 4 cut(s) 250, 266, 1273, 1894
PsuI RGATCY 5 cut(s) 1012, 1488, 1848, 1856, 1876
RsaI GTAC 8 cut(s) 400, 415, 460, 914, 1037, 1713, 2119, 2190
RsaNI GTAC 8 cut(s) 399, 414, 459, 913, 1036, 1712, 2118, 2189
RseI CAYNNNNRTG 1 cut(s) 2005
SacII CCGCGG 1 cut(s) 300
SalI GTCGAC 2 cut(s) 340, 1400
SaqAI TTAA 4 cut(s) 122, 531, 575, 2181
Sau96I GGNCC 4 cut(s) 250, 266, 1273, 1894
ScaI AGTACT 1 cut(s) 914
SchI GAGTC 1 cut(s) 1120
ScrFI CCNGG 4 cut(s) 227, 336, 1083, 2249
SduI GDGCHC 5 cut(s) 438, 1208, 1342, 1678, 2090
SfaNI GCATC 2 cut(s) 1185, 2268
SfcI CTRYAG 2 cut(s) 94, 881
Sfr303I CCGCGG 1 cut(s) 300
SgrBI CCGCGG 1 cut(s) 300
SinI GGWCC 1 cut(s) 250
SmiMI CAYNNNNRTG 1 cut(s) 2005
SmlI CTYRAG 3 cut(s) 1128, 1199, 2012
SmoI CTYRAG 3 cut(s) 1128, 1199, 2012
SnaBI TACGTA 1 cut(s) 869
Sse9I AATT 9 cut(s) 115, 535, 728, 752, 1183, 1500, 1557, 1566, 1655
SsiI CCGC 8 cut(s) 42, 57, 112, 293, 297, 299, 452, 1496
SspMI CTAG 4 cut(s) 515, 1335, 1643, 1853
StyD4I CCNGG 4 cut(s) 225, 334, 1081, 2247
StyI CCWWGG 5 cut(s) 303, 1430, 1693, 1852, 2142
TaaI ACNGT 6 cut(s) 276, 403, 940, 1137, 1324, 1832
TaiI ACGT 5 cut(s) 210, 224, 356, 396, 871
TaqI TCGA 6 cut(s) 341, 580, 588, 1401, 1865, 2027
TasI AATT 9 cut(s) 115, 535, 728, 752, 1183, 1500, 1557, 1566, 1655
TatI WGTACW 3 cut(s) 912, 1035, 2188
TauI GCSGC 6 cut(s) 44, 296, 299, 302, 455, 1499
TfiI GAWTC 6 cut(s) 582, 626, 1078, 1118, 1371, 2253
Tru1I TTAA 4 cut(s) 122, 531, 575, 2181
Tru9I TTAA 4 cut(s) 122, 531, 575, 2181
TscAI CASTG 3 cut(s) 1142, 1359, 1837
TseFI GTSAC 1 cut(s) 1058
TseI GCWGC 7 cut(s) 44, 173, 331, 662, 1634, 1931, 2042
Tsp45I GTSAC 1 cut(s) 1058
TspDTI ATGAA 8 cut(s) 528, 1285, 1771, 1900, 1973, 2045, 2142, 2300
TspGWI ACGGA 2 cut(s) 232, 1814
TspRI CASTG 3 cut(s) 1142, 1359, 1837
Van91I CCANNNNNTGG 1 cut(s) 232
VneI GTGCAC 1 cut(s) 434
VpaK11BI GGWCC 1 cut(s) 250
XagI CCTNNNNNAGG 1 cut(s) 2015
XapI RAATTY 3 cut(s) 535, 728, 1183
XceI RCATGY 1 cut(s) 2124
XcmI CCANNNNNNNNNTGG 1 cut(s) 1867
XmaJI CCTAGG 1 cut(s) 1852
XmiI GTMKAC 3 cut(s) 213, 341, 1401
XspI CTAG 4 cut(s) 515, 1335, 1643, 1853
ZraI GACGTC 1 cut(s) 354
ZrmI AGTACT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.