Rroxscaffold_6G00418560

Methyltransferase FkbM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0013085
Physical Location & Seq
Reverse (-)
40123575 .. 40125509
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00418560.1

Sequence Viewer

Length: 1530 bp
ATGGAGCCTAATACAGTCAAGCCGGGGTTCCTGAAGAACAATCTGGTGCGGTGTTTCCTGTTCGGCGTCGTCATGGTACTGTTCCGGTTCGCTTACGTCATCACCGTCACCGGCGAGTCGTGTAAAGTCGGCAACTTTTGCTTTCTTAATCTTCCGGAGAATCTCAACTTCGTCATCGCCAGCACCGGAGCTTCCGCCGCCGTGACCGCGGACGCCGCCGTTTCGACGAGCGCGGTGGGGCCGAAGAGGAACGACATGTACACGAGCAAGGACTGGATCAAGGCCGTCCATTTTTACTCCGCCGTTTTCCAAGATCTGATCTCGCAGGGGTTTCTGTCGCCGAAATCCAAGTCTCTGTGCGTCGAAACCCCGACGGGGCAGGAAGTCTACGCCTTGAAAGAGAACGGCGTCAAGGACGCGGTCGGGATTTTCAAGAAAGCCTCGAGGCCTTTGGTAATTCGCGGCGAGGCGCACCGGATGCCGTTCGCCGATAACTCGTTCGACTTCGTTTTCTCCGGCAACGGCCGCCTCGACAAGTCGCCGAAGGCGGCGGAGTTCGCGGCGGAGATCGTACGGACGCTCAGGCCGGAAGGGTTTGCGGTGGTCCACATCGGAGCCAAGGATACTTATAGCTTCCATTCTTTTATTGATTTGTTCAATTGCTGCAAGTTAGTTACTTCACGCGACATCGACGGCTTTAATTCGTCGATGCCGGAGATACGTGAAATGGTGTTGAGGAAGGAGTGTGATGCTACGAATGAGGTTGTGAATTCCGGTAATAAGTGCTCGGTTCCGGCGCATAAGCTTGAGTTGGTGAGGAAAGCTGAGCCAATTATTCAGATTGAGCCAATGAAGCCGTGGATTACTTTGAAGAAGAATATACAGAATGTGAAGTACCTTCCGTCGATGGCGGATATTAGCTTTAAGAGGAGGTATGCTTATGTTGATGTTGGAGCTAGGAGCTATGGTTCGAGTATTGGTAGCTGGTTCAAGAAGCAGTACCCGAAGCAGAATAAGACGTTTGAAGTTTTCGCTATTGAGGCTGATAAGATTTTTCATGAACAGTACAAGCTGAAGAAGGGGATTACTTTGCTGCCGTATGCTGCTTGGGTGAGGAATGAGACGTTGTCGTTTGAGATTAACGGAGACCCCGGCGAGAAGGTGAAGGAGAAAGGTAGAGGAATGGGGAGGATTCAGCCGGTGAAGTCTGTTAACGGGGGGTTTGATGGTGAGGTGGATAGGATTCAGGGGTTTGATTTTGCGAATTGGGTGAAGAGTACTTTCACAGAGAAGGATTTCGTGGTGATGAAGATGGATGTGGAAGGGACGGAATTTGATTTGATTCCGAGGCTGTTTGAGACCGGAGCAATTTGTTTGATCGATGAGGTGTTTCTTGAATGCCATTACAATAGGTGGCAGAGGACACGCCCTGGTGAGAGAAGTGCAAAGTATGAAAAAACTTATGGCCAGTGCTTGGACTTGTTTACTTCACTGAGGCAAAGTGGGGTTCTTGTTCATCAGTGGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11 Methyltransf_21

Protein Analysis

509

Amino Acids

57.45

Weight (kDa)

8.9

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_11 PF08241 151 - 201 2.2e-07 Methyltransferase domain
DUF7870 PF25276 282 - 353 4e-09 Domain of unknown function (DUF7870)
DUF7870 PF25276 415 - 509 1.4e-19 Domain of unknown function (DUF7870)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013085)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01710
fragaria_vesca FvH4_6g10540
malus_domestica MD04G1167500.v1.1 MD12G1180800.v1.1
prunus_persica Prupe.6G285700_v2.0.a1
pyrus_communis pycom04g14860 pycom12g17040
rosa_chinensis RchiOBHm_Chr3g0461501
rosa_laevigata RLG00000024927
rosa_multiflora Rmu_sc0002677.1_g000002
rosa_roxburghii Rroxscaffold_6G00418230 Rroxscaffold_6G00418560
rosa_rugosa Rorug03G0051300
rosa_samantha Rh3AG109100 Rh3BG112900 Rh3CG114400 Rh3DG114500
rosa_wichuraiana Rw3G009270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 442
AccB7I CCANNNNNTGG 1 cut(s) 1474
AccI GTMKAC 1 cut(s) 387
AccII CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
AccIII TCCGGA 1 cut(s) 154
AclWI GGATC 1 cut(s) 284
AcoI YGGCCR 2 cut(s) 523, 1465
AcsI RAATTY 2 cut(s) 769, 1331
AcuI CTGAAG 2 cut(s) 53, 1094
AcyI GRCGYC 3 cut(s) 66, 213, 408
AfaI GTAC 7 cut(s) 78, 260, 573, 896, 1001, 1067, 1279
AfiI CCNNNNNNNGG 2 cut(s) 375, 1474
AflIII ACRYGT 1 cut(s) 255
AgsI TTSAA 7 cut(s) 397, 433, 658, 871, 991, 1025, 1397
AjnI CCWGG 1 cut(s) 1429
AloI GAACNNNNNNTCC 2 cut(s) 952, 984
AluBI AGCT 9 cut(s) 191, 633, 805, 824, 921, 956, 963, 984, 1072
AluI AGCT 9 cut(s) 191, 633, 805, 824, 921, 956, 963, 984, 1072
Alw21I GWGCWC 1 cut(s) 788
Alw26I GTCTC 4 cut(s) 357, 1115, 1140, 1352
AlwI GGATC 1 cut(s) 284
Ama87I CYCGRG 1 cut(s) 442
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 6 cut(s) 239, 282, 446, 523, 584, 1465
ApeKI GCWGC 3 cut(s) 663, 1093, 1103
ApoI RAATTY 2 cut(s) 769, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
Asp700I GAANNNNTTC 1 cut(s) 1295
AspLEI GCGC 3 cut(s) 233, 472, 799
AspS9I GGNCC 2 cut(s) 239, 604
AsuC2I CCSGG 2 cut(s) 24, 1152
AvaI CYCGRG 1 cut(s) 442
AvaII GGWCC 1 cut(s) 604
BalI TGGCCA 1 cut(s) 1467
BauI CACGAG 1 cut(s) 262
Bbv12I GWGCWC 1 cut(s) 788
BbvI GCAGC 3 cut(s) 650, 1080, 1090
BccI CCATC 3 cut(s) 901, 1220, 1306
BciT130I CCWGG 1 cut(s) 1431
BciVI GTATCC 1 cut(s) 616
BcnI CCSGG 2 cut(s) 24, 1152
BcoDI GTCTC 4 cut(s) 357, 1115, 1140, 1352
BfaI CTAG 1 cut(s) 957
BfuI GTATCC 1 cut(s) 616
BglII AGATCT 1 cut(s) 313
BisI GCNGC 9 cut(s) 198, 216, 463, 526, 549, 561, 664, 1094, 1104
BlpI GCTNAGC 1 cut(s) 825
BlsI GCNGC 9 cut(s) 199, 217, 464, 527, 550, 562, 665, 1095, 1105
BmcAI AGTACT 1 cut(s) 1279
Bme1390I CCNGG 3 cut(s) 24, 1152, 1431
Bme18I GGWCC 1 cut(s) 604
BmeT110I CYCGRG 1 cut(s) 442
BmgT120I GGNCC 2 cut(s) 239, 604
BmiI GGNNCC 5 cut(s) 6, 29, 240, 616, 792
BmrFI CCNGG 3 cut(s) 24, 1152, 1431
BmsI GCATC 3 cut(s) 468, 699, 739
Bpu10I CCTNAGC 1 cut(s) 581
Bpu1102I GCTNAGC 1 cut(s) 825
BpuEI CTTGAG 1 cut(s) 827
BpuMI CCSGG 2 cut(s) 24, 1152
Bsa29I ATCGAT 1 cut(s) 1380
BsaAI YACGTR 1 cut(s) 722
BsaHI GRCGYC 3 cut(s) 66, 213, 408
BsaI GGTCTC 2 cut(s) 1140, 1352
BsaJI CCNNGG 7 cut(s) 23, 207, 618, 857, 1150, 1346, 1429
BsaWI WCCGGW 6 cut(s) 84, 154, 185, 474, 773, 1361
BsaXI ACNNNNNCTCC 2 cut(s) 952, 982
Bsc4I CCNNNNNNNGG 2 cut(s) 375, 1474
Bse118I RCCGGY 2 cut(s) 110, 1198
Bse1I ACTGG 2 cut(s) 278, 1468
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 1 cut(s) 1431
BseCI ATCGAT 1 cut(s) 1380
BseDI CCNNGG 7 cut(s) 23, 207, 618, 857, 1150, 1346, 1429
BseGI GGATG 2 cut(s) 483, 1321
BseLI CCNNNNNNNGG 2 cut(s) 375, 1474
BseMII CTCAG 3 cut(s) 595, 816, 1484
BseNI ACTGG 2 cut(s) 278, 1468
BseRI GAGGAG 1 cut(s) 943
BseX3I CGGCCG 1 cut(s) 523
BseXI GCAGC 3 cut(s) 650, 1080, 1090
Bsh1236I CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
Bsh1285I CGRYCG 2 cut(s) 423, 526
BshFI GGCC 6 cut(s) 241, 284, 448, 525, 586, 1467
BshVI ATCGAT 1 cut(s) 1380
BsiEI CGRYCG 2 cut(s) 423, 526
BsiHKAI GWGCWC 1 cut(s) 788
BsiHKCI CYCGRG 1 cut(s) 442
BsiWI CGTACG 1 cut(s) 571
BslFI GGGAC 1 cut(s) 1339
BslI CCNNNNNNNGG 2 cut(s) 375, 1474
BsmAI GTCTC 4 cut(s) 357, 1115, 1140, 1352
BsmBI CGTCTC 1 cut(s) 1115
BsmFI GGGAC 1 cut(s) 1339
BsmI GAATGC 1 cut(s) 1403
BsnI GGCC 6 cut(s) 241, 284, 448, 525, 586, 1467
Bso31I GGTCTC 2 cut(s) 1140, 1352
BsoBI CYCGRG 1 cut(s) 442
Bsp1286I GDGCHC 1 cut(s) 788
Bsp13I TCCGGA 1 cut(s) 154
Bsp1407I TGTACA 1 cut(s) 258
Bsp143I GATC 5 cut(s) 276, 313, 318, 567, 1377
Bsp1720I GCTNAGC 1 cut(s) 825
BspANI GGCC 6 cut(s) 241, 284, 448, 525, 586, 1467
BspCNI CTCAG 3 cut(s) 594, 817, 1485
BspDI ATCGAT 1 cut(s) 1380
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
BspHI TCATGA 1 cut(s) 1057
BspLI GGNNCC 5 cut(s) 6, 29, 240, 616, 792
BspPI GGATC 1 cut(s) 284
BspTNI GGTCTC 2 cut(s) 1140, 1352
BsrFI RCCGGY 2 cut(s) 110, 1198
BsrGI TGTACA 1 cut(s) 258
BsrI ACTGG 2 cut(s) 278, 1468
BssAI RCCGGY 2 cut(s) 110, 1198
BssECI CCNNGG 7 cut(s) 23, 207, 618, 857, 1150, 1346, 1429
BssMI GATC 5 cut(s) 276, 313, 318, 567, 1377
BssNI GRCGYC 3 cut(s) 66, 213, 408
BssSI CACGAG 1 cut(s) 262
BssT1I CCWWGG 1 cut(s) 618
Bst2BI CACGAG 1 cut(s) 262
Bst2UI CCWGG 1 cut(s) 1431
Bst4CI ACNGT 4 cut(s) 16, 81, 106, 1065
Bst6I CTCTTC 2 cut(s) 239, 1268
BstACI GRCGYC 3 cut(s) 66, 213, 408
BstAPI GCANNNNNTGC 2 cut(s) 138, 478
BstAUI TGTACA 1 cut(s) 258
BstBAI YACGTR 1 cut(s) 722
BstC8I GCNNGC 1 cut(s) 181
BstDEI CTNAG 3 cut(s) 581, 825, 1493
BstDSI CCRYGG 2 cut(s) 207, 857
BstF5I GGATG 2 cut(s) 483, 1321
BstFNI CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
BstHHI GCGC 3 cut(s) 233, 472, 799
BstKTI GATC 5 cut(s) 279, 316, 321, 570, 1380
BstMAI GTCTC 4 cut(s) 357, 1115, 1140, 1352
BstMBI GATC 5 cut(s) 276, 313, 318, 567, 1377
BstMCI CGRYCG 2 cut(s) 423, 526
BstMWI GCNNNNNNNGC 9 cut(s) 138, 197, 206, 215, 478, 525, 557, 853, 1040
BstNI CCWGG 1 cut(s) 1431
BstNSI RCATGY 1 cut(s) 259
BstSCI CCNGG 3 cut(s) 22, 1150, 1429
BstUI CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
BstV1I GCAGC 3 cut(s) 650, 1080, 1090
BstX2I RGATCY 1 cut(s) 313
BstYI RGATCY 1 cut(s) 313
BstZI CGGCCG 1 cut(s) 523
Bsu15I ATCGAT 1 cut(s) 1380
BsuI GTATCC 1 cut(s) 616
BsuRI GGCC 6 cut(s) 241, 284, 448, 525, 586, 1467
BsuTUI ATCGAT 1 cut(s) 1380
BtgI CCRYGG 2 cut(s) 207, 857
BtgZI GCGATG 1 cut(s) 160
BtsCI GGATG 2 cut(s) 483, 1321
BtsIMutI CAGTG 3 cut(s) 1475, 1490, 1526
Cac8I GCNNGC 1 cut(s) 181
CciI TCATGA 1 cut(s) 1057
CfoI GCGC 3 cut(s) 233, 472, 799
Cfr10I RCCGGY 2 cut(s) 110, 1198
Cfr13I GGNCC 2 cut(s) 239, 604
Cfr42I CCGCGG 1 cut(s) 210
ClaI ATCGAT 1 cut(s) 1380
CseI GACGC 6 cut(s) 55, 221, 349, 397, 425, 586
Csp6I GTAC 7 cut(s) 77, 259, 572, 895, 1000, 1066, 1278
CviAII CATG 3 cut(s) 73, 256, 1058
CviQI GTAC 7 cut(s) 77, 259, 572, 895, 1000, 1066, 1278
DdeI CTNAG 3 cut(s) 581, 825, 1493
DpnI GATC 5 cut(s) 278, 315, 320, 569, 1379
DpnII GATC 5 cut(s) 276, 313, 318, 567, 1377
EaeI YGGCCR 2 cut(s) 523, 1465
EagI CGGCCG 1 cut(s) 523
Eam1104I CTCTTC 2 cut(s) 239, 1268
EarI CTCTTC 2 cut(s) 239, 1268
EciI GGCGGA 5 cut(s) 184, 289, 566, 578, 926
EclXI CGGCCG 1 cut(s) 523
Eco130I CCWWGG 1 cut(s) 618
Eco147I AGGCCT 1 cut(s) 448
Eco31I GGTCTC 2 cut(s) 1140, 1352
Eco47I GGWCC 1 cut(s) 604
Eco52I CGGCCG 1 cut(s) 523
Eco57I CTGAAG 2 cut(s) 53, 1094
Eco88I CYCGRG 1 cut(s) 442
EcoRI GAATTC 1 cut(s) 769
EcoRII CCWGG 1 cut(s) 1429
EcoT14I CCWWGG 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 618
Esp3I CGTCTC 1 cut(s) 1115
FaeI CATG 3 cut(s) 76, 259, 1061
FaqI GGGAC 1 cut(s) 1339
FatI CATG 3 cut(s) 72, 255, 1057
FblI GTMKAC 1 cut(s) 387
Fnu4HI GCNGC 9 cut(s) 198, 216, 463, 526, 549, 561, 664, 1094, 1104
FokI GGATG 2 cut(s) 490, 1328
Fsp4HI GCNGC 9 cut(s) 198, 216, 463, 526, 549, 561, 664, 1094, 1104
FspBI CTAG 1 cut(s) 957
GlaI GCGC 3 cut(s) 232, 471, 798
GluI GCNGC 9 cut(s) 198, 216, 463, 526, 549, 561, 664, 1094, 1104
HaeIII GGCC 6 cut(s) 241, 284, 448, 525, 586, 1467
HgaI GACGC 6 cut(s) 55, 221, 349, 397, 425, 586
HhaI GCGC 3 cut(s) 233, 472, 799
Hin1I GRCGYC 3 cut(s) 66, 213, 408
Hin1II CATG 3 cut(s) 76, 259, 1061
Hin6I GCGC 3 cut(s) 231, 470, 797
HinP1I GCGC 3 cut(s) 231, 470, 797
HincII GTYRAC 1 cut(s) 1213
HindII GTYRAC 1 cut(s) 1213
HindIII AAGCTT 1 cut(s) 803
HinfI GANTC 5 cut(s) 116, 160, 1192, 1243, 1342
HpaI GTTAAC 1 cut(s) 1213
Hpy166II GTNNAC 5 cut(s) 261, 388, 607, 1213, 1485
Hpy188I TCNGA 4 cut(s) 318, 614, 840, 1347
Hpy188III TCNNGA 7 cut(s) 31, 155, 424, 433, 991, 1058, 1394
Hpy8I GTNNAC 5 cut(s) 261, 388, 607, 1213, 1485
Hpy99I CGWCG 7 cut(s) 71, 229, 365, 376, 695, 709, 907
HpyAV CCTTC 9 cut(s) 538, 584, 733, 908, 1072, 1153, 1159, 1285, 1316
HpyCH4III ACNGT 4 cut(s) 16, 81, 106, 1065
HpyCH4IV ACGT 4 cut(s) 96, 721, 1019, 1124
HpyCH4V TGCA 2 cut(s) 666, 1445
HpyF10VI GCNNNNNNNGC 9 cut(s) 138, 197, 206, 215, 478, 525, 557, 853, 1040
HpyF3I CTNAG 3 cut(s) 581, 825, 1493
HpySE526I ACGT 4 cut(s) 96, 721, 1019, 1124
Hsp92I GRCGYC 3 cut(s) 66, 213, 408
Hsp92II CATG 3 cut(s) 76, 259, 1061
HspAI GCGC 3 cut(s) 231, 470, 797
Kpn2I TCCGGA 1 cut(s) 154
KspAI GTTAAC 1 cut(s) 1213
KspI CCGCGG 1 cut(s) 210
Kzo9I GATC 5 cut(s) 276, 313, 318, 567, 1377
LmnI GCTCC 6 cut(s) 4, 188, 614, 953, 960, 1364
Lsp1109I GCAGC 3 cut(s) 650, 1080, 1090
LweI GCATC 3 cut(s) 468, 699, 739
MaeI CTAG 1 cut(s) 957
MaeII ACGT 4 cut(s) 96, 721, 1019, 1124
MaeIII GTNAC 3 cut(s) 106, 202, 673
MalI GATC 5 cut(s) 278, 315, 320, 569, 1379
MboI GATC 5 cut(s) 276, 313, 318, 567, 1377
MboII GAAGA 8 cut(s) 46, 143, 256, 883, 886, 1087, 1285, 1321
MfeI CAATTG 1 cut(s) 658
MflI RGATCY 1 cut(s) 313
MhlI GDGCHC 1 cut(s) 788
MlsI TGGCCA 1 cut(s) 1467
MluCI AATT 8 cut(s) 456, 658, 700, 769, 831, 1264, 1331, 1368
MluNI TGGCCA 1 cut(s) 1467
MlyI GAGTC 1 cut(s) 125
MmeI TCCRAC 1 cut(s) 931
Mox20I TGGCCA 1 cut(s) 1467
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 1295
MscI TGGCCA 1 cut(s) 1467
MseI TTAA 5 cut(s) 147, 699, 924, 1140, 1212
Msp20I TGGCCA 1 cut(s) 1467
MspA1I CMGCKG 1 cut(s) 209
MspR9I CCNGG 3 cut(s) 24, 1152, 1431
MunI CAATTG 1 cut(s) 658
Mva1269I GAATGC 1 cut(s) 1403
MvaI CCWGG 1 cut(s) 1431
MvnI CGCG 6 cut(s) 209, 233, 419, 462, 560, 684
MwoI GCNNNNNNNGC 9 cut(s) 138, 197, 206, 215, 478, 525, 557, 853, 1040
NciI CCSGG 2 cut(s) 24, 1152
NdeII GATC 5 cut(s) 276, 313, 318, 567, 1377
NlaIII CATG 3 cut(s) 76, 259, 1061
NlaIV GGNNCC 5 cut(s) 6, 29, 240, 616, 792
NmuCI GTSAC 2 cut(s) 106, 202
NspI RCATGY 1 cut(s) 259
PaeR7I CTCGAG 1 cut(s) 442
PagI TCATGA 1 cut(s) 1057
PceI AGGCCT 1 cut(s) 448
PciI ACATGT 1 cut(s) 255
PcsI WCGNNNNNNNCGW 2 cut(s) 102, 528
PctI GAATGC 1 cut(s) 1403
PdmI GAANNNNTTC 1 cut(s) 1295
PfeI GAWTC 4 cut(s) 160, 1192, 1243, 1342
Pfl23II CGTACG 1 cut(s) 571
PflFI GACNNNGTC 2 cut(s) 419, 1126
PflMI CCANNNNNTGG 1 cut(s) 1474
PkrI GCNGC 9 cut(s) 199, 217, 464, 527, 550, 562, 665, 1095, 1105
PleI GAGTC 1 cut(s) 124
PpsI GAGTC 1 cut(s) 124
Ppu21I YACGTR 1 cut(s) 722
PscI ACATGT 1 cut(s) 255
Psp6I CCWGG 1 cut(s) 1429
PspGI CCWGG 1 cut(s) 1429
PspLI CGTACG 1 cut(s) 571
PspN4I GGNNCC 5 cut(s) 6, 29, 240, 616, 792
PspPI GGNCC 2 cut(s) 239, 604
PspXI VCTCGAGB 1 cut(s) 442
PsrI GAACNNNNNNTAC 2 cut(s) 242, 274
PsuI RGATCY 1 cut(s) 313
PsyI GACNNNGTC 2 cut(s) 419, 1126
RsaI GTAC 7 cut(s) 78, 260, 573, 896, 1001, 1067, 1279
RsaNI GTAC 7 cut(s) 77, 259, 572, 895, 1000, 1066, 1278
SacII CCGCGG 1 cut(s) 210
SaqAI TTAA 5 cut(s) 147, 699, 924, 1140, 1212
SatI GCNGC 9 cut(s) 198, 216, 463, 526, 549, 561, 664, 1094, 1104
Sau3AI GATC 5 cut(s) 276, 313, 318, 567, 1377
Sau96I GGNCC 2 cut(s) 239, 604
ScaI AGTACT 1 cut(s) 1279
SchI GAGTC 1 cut(s) 125
ScrFI CCNGG 3 cut(s) 24, 1152, 1431
SduI GDGCHC 1 cut(s) 788
SfaNI GCATC 3 cut(s) 468, 699, 739
Sfr274I CTCGAG 1 cut(s) 442
Sfr303I CCGCGG 1 cut(s) 210
SgrAI CRCCGGYG 1 cut(s) 110
SgrBI CCGCGG 1 cut(s) 210
SinI GGWCC 1 cut(s) 604
SlaI CTCGAG 1 cut(s) 442
SmlI CTYRAG 2 cut(s) 442, 806
SmoI CTYRAG 2 cut(s) 442, 806
Sse9I AATT 8 cut(s) 456, 658, 700, 769, 831, 1264, 1331, 1368
SseBI AGGCCT 1 cut(s) 448
SspMI CTAG 1 cut(s) 957
StuI AGGCCT 1 cut(s) 448
StyD4I CCNGG 3 cut(s) 22, 1150, 1429
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 4 cut(s) 16, 81, 106, 1065
TaiI ACGT 4 cut(s) 99, 724, 1022, 1127
TasI AATT 8 cut(s) 456, 658, 700, 769, 831, 1264, 1331, 1368
TatI WGTACW 3 cut(s) 258, 1065, 1277
TauI GCSGC 6 cut(s) 200, 218, 465, 528, 551, 563
TfiI GAWTC 4 cut(s) 160, 1192, 1243, 1342
Tru1I TTAA 5 cut(s) 147, 699, 924, 1140, 1212
Tru9I TTAA 5 cut(s) 147, 699, 924, 1140, 1212
TscAI CASTG 3 cut(s) 1475, 1497, 1526
TseFI GTSAC 2 cut(s) 106, 202
TseI GCWGC 3 cut(s) 663, 1093, 1103
Tsp45I GTSAC 2 cut(s) 106, 202
TspDTI ATGAA 6 cut(s) 866, 1046, 1074, 1322, 1467, 1505
TspGWI ACGGA 4 cut(s) 589, 891, 1158, 1343
TspRI CASTG 3 cut(s) 1475, 1497, 1526
Tth111I GACNNNGTC 2 cut(s) 419, 1126
Van91I CCANNNNNTGG 1 cut(s) 1474
VpaK11BI GGWCC 1 cut(s) 604
XapI RAATTY 2 cut(s) 769, 1331
XceI RCATGY 1 cut(s) 259
XcmI CCANNNNNNNNNTGG 1 cut(s) 855
XhoI CTCGAG 1 cut(s) 442
XmiI GTMKAC 1 cut(s) 387
XmnI GAANNNNTTC 1 cut(s) 1295
XspI CTAG 1 cut(s) 957
ZrmI AGTACT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.