Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0011829

Physical Location & Seq

Genomic Coordinates Forward (+)

40541023 .. 40548798

Gene Structure 7776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00418990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGAGCCCGATAAAAGCGGCATGAATGGGGGAGTGCCAGGGTCGGGTTTGCGGGCGGAGATCGACACGTCGGCGCCGTTTGAATCGGTGAAGGAGGCGGTGAGTCGATTCGGTGGAGTCGGGTACTGGAAACCCACAAATGCTAATAAGTGTTCGGAGCCTGAGCATGACATGGAAGAGGTCGACACTGAAAAACTGGAGGAGCAGGCTTTACAGTTGGAGAAAGATCTCACTTTGAAAGAAAGGGAAACTCTTGATGTTCTAATAGAACTGGAACAAACCAAAAAGATTATTGATGAATTGAAGAAAAGGCTACAGAAAGAAGTATCTGAAGTGGACCTCGAGACAGATGTAGCACCAGGTTTAATCTTAATGGAATTGAAACAAGCTAAGGTGAACCTTACCAGGACTACTAGTGATCTTGCTGACATTCGGGCTTCCGTTGAAACATTCAACAAGAAATTAGAGAAGGAAAGAGTCGCACTTGAGAAGACCCGTGTGAGGTTAACTTCAAATTCTTTAAAAATGCTGTCTCTTGAAGAAGAGCTCAACCAGACGAAACAAAAGCTACAGTTGGCAAAGGATGCTGAATCTAAAGGTGCCCCTGATAAGTCTTTAGATATTTCAAAGGAGCTTCGACGACTGAGTTCTGAGACGGAGCAGTTCAAAAAAATGGCAGAAGCTGCCAAGTTAGAGGTTTCGAGAGCAACTTCTGAGATTGAGCAGACGAGAGGTAAGATAAAGACAGCTGAAATCAGGTTGGTTGCCGCAAGAAAGATGAAAGCAGCAGCTAGAGCTGCAGAAGCTTTTGCTCTTGCAGAAATTAAGGCTCTATCAAACCAGGAGAATTCATCTGGAGATGCATTGCAGAAACCTGAAGGAGTAACTCTTTCATTTGAAGAATACTCAACCCTAACCCGCAAGGTTCGAGATGCAGAAGAGCTTTCTAAGAAGAGAGTAAGAGATGCCATGAAGCATGTTGATGATGCAAATGTATCGAAAACAGAAATCTTGAAGAAGGTAGAGGAAGCAACCGAGGAAGTCAAAACCAGTAAAAAGGCATTGGAAGAAGCACTGAACAGAGTGGAGGCTGCAAATAGGGGCAAGCTGGCAGTGGAAGAAGCTCTTCGCAAATGGAGATCCCAGCATGGTCAAAAAAGACGTTCTTCGGTACACAACTCTACCAAGTTCAAGAATCCTTGCCCATCAAATCATGCCAGAGAGTTGCAATTGCGTGACGTAAATGGTCTGAATCTAGTTGGTGATGAATCAATGCCGGTTCTGAGGCCAACCTTATCAATCGGACAAATCCTAAGCAGGAAGTTGCTTATGCCTGAAGAGGATGAAATGGAACTGACCGAAAAGACACCTATAAAACAGAAGGTGTCACTGGGTCAGATGCTCAGCAAGCAAAACGGTGATCAACCCTCTTCTAAGAAGTTTGAAAAGGAAAGTGGTCTCAAGAATTTTTCTGCTAAAAGAAAGAAGTCCGGATTTGCTCGGTTCTCACTTCTTTTGACAAAGCAAAGCAGGAAGAAGAAGAAGCCAACTCCAGACTTGAATGCAAGAGGGGAACCTCAAACTTCGAAAGAATTTTCTGGGAATGAAAATGTTTGCACATTATGTGAAGAGTTTGCATCTCAGGCACTTGATTACATCAGTGAAAACAAGACTCAGACTGAGATCATTGGAATTCTACATAACACCTGCTCTCAATTGAAATCTTTCAGCCAGCAGTGTGTCACTTTGGTGGACTACTATGCTCCTCTCTTCTTCCTAGAGGTTACCTCTGTAGAACCAGTTGATTTCTGTCGGAAGGTCAACCTATGTCAGCAAGTTGCAACATTTTCTTCGCAACTCCGTGAGGACAGCTGTGGATTATGTCACCGGGCTGTTTCAGAAGTATTAGCCAAGTTAAAAGATCCTGATACACAGCTGGAGATCATTGAGATTCTTTTGAAGGCATGCAATTCTATGGAGAACTATGTCAAGAAGTGCAAGAGGATCGTTTTCGAGTATGGACCACTATTCCTTGTGAATGCAGAGGAGTATCTTGAGAAAACAGACATATGCACCGAACTTCATGCCTGCAATCCAAGCACAGTTAGTACGATGGAAGCATCATTGTTGGATATTGGATCCAGGCAGGCTGACTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

719

Amino Acids

80.66

Weight (kDa)

6.79

Isoelectric Point (pI)

47.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	19 - 108	4.6e-17	Weak chloroplast movement under blue light
WEMBL	PF05701	125 - 386	3.3e-49	Weak chloroplast movement under blue light
SapB_1	PF05184	538 - 573	4.2e-11	Saposin-like type B, region 1
SapB_1	PF05184	624 - 659	4.1e-09	Saposin-like type B, region 1
SapB_2	PF03489	664 - 697	2.3e-07	Saposin-like type B, region 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38370 AT2G38370
fragaria_vesca	FvH4_6g10230
malus_domestica	MD04G1171400.v1.1 MD12G1184800.v1.1
prunus_persica	Prupe.6G289900_v2.0.a1
pyrus_communis	pycom04g15180 pycom12g17360
rosa_chinensis	RchiOBHm_Chr3g0460971
rosa_laevigata	RLG00000024962
rosa_multiflora	Rmu_sc0006670.1_g000001
rosa_roxburghii	Rroxscaffold_6G00418990
rosa_rugosa	Rorug03G0047500
rosa_samantha	Rh3AG104800 Rh3BG108600 Rh3CG110100 Rh3DG110300 Rh3DG110400
rosa_wichuraiana	Rw3G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1715
Acc36I	ACCTGC	1 cut(s)	1715
AccB1I	GGYRCC	2 cut(s)	73, 599
AccI	GTMKAC	1 cut(s)	183
AccIII	TCCGGA	1 cut(s)	1490
AciI	CCGC	6 cut(s)	18, 52, 56, 98, 768, 919
AclWI	GGATC	5 cut(s)	1134, 1916, 2012, 2133, 2146
AcsI	RAATTY	5 cut(s)	514, 847, 1465, 1592, 1692
AcuI	CTGAAG	3 cut(s)	351, 897, 1356
AcyI	GRCGYC	1 cut(s)	74
AfaI	GTAC	3 cut(s)	125, 1173, 2110
AfiI	CCNNNNNNNGG	2 cut(s)	44, 501
AflIII	ACRYGT	1 cut(s)	66
AhlI	ACTAGT	1 cut(s)	413
AjiI	CACGTC	1 cut(s)	69
AjnI	CCWGG	5 cut(s)	37, 358, 404, 840, 2141
AleI	CACNNNNGTG	1 cut(s)	1748
Alw21I	GWGCWC	1 cut(s)	549
Alw26I	GTCTC	4 cut(s)	338, 537, 647, 1463
AlwI	GGATC	5 cut(s)	1134, 1916, 2012, 2133, 2146
AlwNI	CAGNNNCTG	1 cut(s)	683
Ama87I	CYCGRG	1 cut(s)	341
Aor13HI	TCCGGA	1 cut(s)	1490
AoxI	GGCC	1 cut(s)	1286
ApeKI	GCWGC	5 cut(s)	683, 785, 788, 797, 1091
ApoI	RAATTY	5 cut(s)	514, 847, 1465, 1592, 1692
Asp700I	GAANNNNTTC	2 cut(s)	1125, 1724
AspLEI	GCGC	1 cut(s)	76
AspS9I	GGNCC	2 cut(s)	337, 2021
AsuC2I	CCSGG	1 cut(s)	1889
AsuHPI	GGTGA	6 cut(s)	100, 112, 406, 1274, 1430, 1877
AsuII	TTCGAA	1 cut(s)	1586
AvaI	CYCGRG	1 cut(s)	341
AvaII	GGWCC	2 cut(s)	337, 2021
BaeGI	GKGCMC	1 cut(s)	604
BamHI	GGATCC	1 cut(s)	2138
BanI	GGYRCC	2 cut(s)	73, 599
BanII	GRGCYC	2 cut(s)	9, 549
BbsI	GAAGAC	1 cut(s)	497
Bbv12I	GWGCWC	1 cut(s)	549
BbvI	GCAGC	5 cut(s)	670, 784, 797, 800, 1078
BccI	CCATC	2 cut(s)	1213, 2107
BceAI	ACGGC	1 cut(s)	61
BcgI	CGANNNNNNTGC	6 cut(s)	978, 1012, 1987, 2021, 2066, 2100
BciT130I	CCWGG	5 cut(s)	39, 360, 406, 842, 2143
BclI	TGATCA	1 cut(s)	1420
BcnI	CCSGG	1 cut(s)	1889
BcoDI	GTCTC	4 cut(s)	338, 537, 647, 1463
BcuI	ACTAGT	1 cut(s)	413
BfaI	CTAG	4 cut(s)	414, 792, 1256, 1778
BfmI	CTRYAG	4 cut(s)	314, 569, 798, 1791
BfoI	RGCGCY	1 cut(s)	77
BfuAI	ACCTGC	1 cut(s)	1715
BglII	AGATCT	1 cut(s)	226
BisI	GCNGC	7 cut(s)	19, 684, 768, 786, 789, 798, 1092
BlpI	GCTNAGC	1 cut(s)	1403
BlsI	GCNGC	7 cut(s)	20, 685, 769, 787, 790, 799, 1093
Bme1390I	CCNGG	6 cut(s)	39, 360, 406, 842, 1889, 2143
Bme18I	GGWCC	2 cut(s)	337, 2021
BmeT110I	CYCGRG	1 cut(s)	341
BmgBI	CACGTC	1 cut(s)	69
BmgT120I	GGNCC	2 cut(s)	337, 2021
BmiI	GGNNCC	6 cut(s)	6, 75, 159, 601, 1575, 2140
BmrFI	CCNGG	6 cut(s)	39, 360, 406, 842, 1889, 2143
BmrI	ACTGGG	1 cut(s)	1400
BmsI	GCATC	8 cut(s)	574, 850, 922, 955, 976, 1389, 1646, 2129
BmuI	ACTGGG	1 cut(s)	1400
BpiI	GAAGAC	1 cut(s)	497
BplI	GAGNNNNNCTC	2 cut(s)	1772, 1804
BpmI	CTGGAG	4 cut(s)	218, 876, 1536, 1958
Bpu10I	CCTNAGC	3 cut(s)	162, 390, 1313
Bpu1102I	GCTNAGC	1 cut(s)	1403
Bpu14I	TTCGAA	1 cut(s)	1586
BpuEI	CTTGAG	3 cut(s)	506, 1445, 2075
BpuMI	CCSGG	1 cut(s)	1889
BsaHI	GRCGYC	1 cut(s)	74
BsaI	GGTCTC	1 cut(s)	1463
BsaJI	CCNNGG	2 cut(s)	38, 1035
BsaWI	WCCGGW	1 cut(s)	1490
Bsc4I	CCNNNNNNNGG	2 cut(s)	44, 501
Bse118I	RCCGGY	1 cut(s)	1276
Bse1I	ACTGG	6 cut(s)	131, 201, 276, 1050, 1395, 1799
Bse3DI	GCAATG	1 cut(s)	863
BseAI	TCCGGA	1 cut(s)	1490
BseBI	CCWGG	5 cut(s)	39, 360, 406, 842, 2143
BseDI	CCNNGG	2 cut(s)	38, 1035
BseGI	GGATG	2 cut(s)	589, 1348
BseLI	CCNNNNNNNGG	2 cut(s)	44, 501
BseMI	GCAATG	1 cut(s)	863
BseMII	CTCAG	9 cut(s)	153, 635, 642, 705, 1274, 1417, 1655, 1671, 1688
BseNI	ACTGG	6 cut(s)	131, 201, 276, 1050, 1395, 1799
BseRI	GAGGAG	3 cut(s)	215, 1755, 2060
BseSI	GKGCMC	1 cut(s)	604
BseXI	GCAGC	5 cut(s)	670, 784, 797, 800, 1078
BseYI	CCCAGC	1 cut(s)	1143
BshFI	GGCC	1 cut(s)	1288
BshNI	GGYRCC	2 cut(s)	73, 599
BsiHKAI	GWGCWC	1 cut(s)	549
BsiHKCI	CYCGRG	1 cut(s)	341
BsiSI	CCGG	3 cut(s)	1277, 1491, 1888
BslI	CCNNNNNNNGG	2 cut(s)	44, 501
BsmAI	GTCTC	4 cut(s)	338, 537, 647, 1463
BsmBI	CGTCTC	1 cut(s)	647
BsmI	GAATGC	2 cut(s)	1567, 2044
BsnI	GGCC	1 cut(s)	1288
Bso31I	GGTCTC	1 cut(s)	1463
BsoBI	CYCGRG	1 cut(s)	341
Bsp119I	TTCGAA	1 cut(s)	1586
Bsp1286I	GDGCHC	3 cut(s)	9, 549, 604
Bsp13I	TCCGGA	1 cut(s)	1490
Bsp1720I	GCTNAGC	1 cut(s)	1403
BspACI	CCGC	6 cut(s)	18, 52, 56, 98, 768, 919
BspANI	GGCC	1 cut(s)	1288
BspCNI	CTCAG	9 cut(s)	154, 636, 643, 706, 1275, 1416, 1654, 1672, 1687
BspEI	TCCGGA	1 cut(s)	1490
BspLI	GGNNCC	6 cut(s)	6, 75, 159, 601, 1575, 2140
BspMAI	CTGCAG	1 cut(s)	802
BspMI	ACCTGC	1 cut(s)	1715
BspPI	GGATC	5 cut(s)	1134, 1916, 2012, 2133, 2146
BspQI	GCTCTTC	3 cut(s)	537, 933, 1131
BspT104I	TTCGAA	1 cut(s)	1586
BspT107I	GGYRCC	2 cut(s)	73, 599
BspTNI	GGTCTC	1 cut(s)	1463
BsrDI	GCAATG	1 cut(s)	863
BsrFI	RCCGGY	1 cut(s)	1276
BsrI	ACTGG	6 cut(s)	131, 201, 276, 1050, 1395, 1799
BssAI	RCCGGY	1 cut(s)	1276
BssECI	CCNNGG	2 cut(s)	38, 1035
BssNI	GRCGYC	1 cut(s)	74
Bst2UI	CCWGG	5 cut(s)	39, 360, 406, 842, 2143
Bst4CI	ACNGT	4 cut(s)	216, 573, 1418, 2104
Bst6I	CTCTTC	9 cut(s)	171, 537, 933, 947, 1131, 1332, 1435, 1623, 1775
BstACI	GRCGYC	1 cut(s)	74
BstAPI	GCANNNNNTGC	2 cut(s)	584, 683
BstBI	TTCGAA	1 cut(s)	1586
BstC8I	GCNNGC	9 cut(s)	54, 207, 1106, 1110, 1409, 1733, 1966, 2089, 2148
BstEII	GGTNACC	1 cut(s)	1783
BstF5I	GGATG	2 cut(s)	589, 1348
BstH2I	RGCGCY	1 cut(s)	77
BstHHI	GCGC	1 cut(s)	76
BstMAI	GTCTC	4 cut(s)	338, 537, 647, 1463
BstMWI	GCNNNNNNNGC	8 cut(s)	584, 683, 794, 797, 803, 1408, 1643, 2097
BstNI	CCWGG	5 cut(s)	39, 360, 406, 842, 2143
BstNSI	RCATGY	2 cut(s)	980, 1968
BstPI	GGTNACC	1 cut(s)	1783
BstSCI	CCNGG	6 cut(s)	37, 358, 404, 840, 1887, 2141
BstSFI	CTRYAG	4 cut(s)	314, 569, 798, 1791
BstSLI	GKGCMC	1 cut(s)	604
BstV1I	GCAGC	5 cut(s)	670, 784, 797, 800, 1078
BstV2I	GAAGAC	1 cut(s)	497
BstX2I	RGATCY	4 cut(s)	226, 1139, 1921, 2138
BstYI	RGATCY	4 cut(s)	226, 1139, 1921, 2138
BsuRI	GGCC	1 cut(s)	1288
BtrI	CACGTC	1 cut(s)	69
BtsCI	GGATG	2 cut(s)	589, 1348
BtsI	GCAGTG	2 cut(s)	1119, 1742
BtsIMutI	CAGTG	6 cut(s)	186, 1073, 1119, 1388, 1666, 1742
BveI	ACCTGC	1 cut(s)	1715
Cac8I	GCNNGC	9 cut(s)	54, 207, 1106, 1110, 1409, 1733, 1966, 2089, 2148
CaiI	CAGNNNCTG	1 cut(s)	683
CfoI	GCGC	1 cut(s)	76
Cfr10I	RCCGGY	1 cut(s)	1276
Cfr13I	GGNCC	2 cut(s)	337, 2021
CsiI	ACCWGGT	1 cut(s)	358
Csp6I	GTAC	3 cut(s)	124, 1172, 2109
CviAII	CATG	9 cut(s)	22, 167, 172, 970, 977, 1148, 1214, 1965, 2084
CviQI	GTAC	3 cut(s)	124, 1172, 2109
DinI	GGCGCC	1 cut(s)	75
DraI	TTTAAA	1 cut(s)	522
Eam1104I	CTCTTC	9 cut(s)	171, 537, 933, 947, 1131, 1332, 1435, 1623, 1775
EarI	CTCTTC	9 cut(s)	171, 537, 933, 947, 1131, 1332, 1435, 1623, 1775
EciI	GGCGGA	1 cut(s)	71
Ecl136II	GAGCTC	1 cut(s)	547
Eco24I	GRGCYC	2 cut(s)	9, 549
Eco31I	GGTCTC	1 cut(s)	1463
Eco47I	GGWCC	2 cut(s)	337, 2021
Eco53kI	GAGCTC	1 cut(s)	547
Eco57I	CTGAAG	3 cut(s)	351, 897, 1356
Eco88I	CYCGRG	1 cut(s)	341
Eco91I	GGTNACC	1 cut(s)	1783
EcoICRI	GAGCTC	1 cut(s)	547
EcoO65I	GGTNACC	1 cut(s)	1783
EcoRI	GAATTC	2 cut(s)	847, 1692
EcoRII	CCWGG	5 cut(s)	37, 358, 404, 840, 2141
EcoT22I	ATGCAT	1 cut(s)	865
EcoT38I	GRGCYC	2 cut(s)	9, 549
EgeI	GGCGCC	1 cut(s)	75
EheI	GGCGCC	1 cut(s)	75
Esp3I	CGTCTC	1 cut(s)	647
FaeI	CATG	9 cut(s)	25, 170, 175, 973, 980, 1151, 1217, 1968, 2087
FalI	AAGNNNNNCTT	4 cut(s)	1110, 1142, 1150, 1182
FatI	CATG	9 cut(s)	21, 166, 171, 969, 976, 1147, 1213, 1964, 2083
FauI	CCCGC	2 cut(s)	45, 926
FauNDI	CATATG	1 cut(s)	2069
FbaI	TGATCA	1 cut(s)	1420
FblI	GTMKAC	1 cut(s)	183
Fnu4HI	GCNGC	7 cut(s)	19, 684, 768, 786, 789, 798, 1092
FokI	GGATG	2 cut(s)	596, 1355
FriOI	GRGCYC	2 cut(s)	9, 549
Fsp4HI	GCNGC	7 cut(s)	19, 684, 768, 786, 789, 798, 1092
FspBI	CTAG	4 cut(s)	414, 792, 1256, 1778
GlaI	GCGC	1 cut(s)	75
GluI	GCNGC	7 cut(s)	19, 684, 768, 786, 789, 798, 1092
GsaI	CCCAGC	1 cut(s)	1147
GsuI	CTGGAG	4 cut(s)	218, 876, 1536, 1958
HaeII	RGCGCY	1 cut(s)	77
HaeIII	GGCC	1 cut(s)	1288
HapII	CCGG	3 cut(s)	1277, 1491, 1888
HhaI	GCGC	1 cut(s)	76
Hin1I	GRCGYC	1 cut(s)	74
Hin1II	CATG	9 cut(s)	25, 170, 175, 973, 980, 1151, 1217, 1968, 2087
Hin6I	GCGC	1 cut(s)	74
HinP1I	GCGC	1 cut(s)	74
HincII	GTYRAC	3 cut(s)	184, 507, 1822
HindII	GTYRAC	3 cut(s)	184, 507, 1822
HindIII	AAGCTT	1 cut(s)	804
HpaI	GTTAAC	1 cut(s)	507
HpaII	CCGG	3 cut(s)	1277, 1491, 1888
HphI	GGTGA	6 cut(s)	100, 112, 406, 1274, 1430, 1877
Hpy166II	GTNNAC	7 cut(s)	184, 337, 397, 507, 1174, 1753, 1822
Hpy8I	GTNNAC	7 cut(s)	184, 337, 397, 507, 1174, 1753, 1822
Hpy99I	CGWCG	2 cut(s)	73, 642
HpyAV	CCTTC	7 cut(s)	85, 463, 872, 1012, 1375, 1810, 1954
HpyCH4III	ACNGT	4 cut(s)	216, 573, 1418, 2104
HpyCH4IV	ACGT	3 cut(s)	68, 1162, 1239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	584, 683, 794, 797, 803, 1408, 1643, 2097
HpySE526I	ACGT	3 cut(s)	68, 1162, 1239
Hsp92I	GRCGYC	1 cut(s)	74
Hsp92II	CATG	9 cut(s)	25, 170, 175, 973, 980, 1151, 1217, 1968, 2087
HspAI	GCGC	1 cut(s)	74
KasI	GGCGCC	1 cut(s)	73
Kpn2I	TCCGGA	1 cut(s)	1490
Ksp22I	TGATCA	1 cut(s)	1420
KspAI	GTTAAC	1 cut(s)	507
LguI	GCTCTTC	3 cut(s)	537, 933, 1131
LmnI	GCTCC	6 cut(s)	4, 157, 202, 631, 658, 1768
Lsp1109I	GCAGC	5 cut(s)	670, 784, 797, 800, 1078
LweI	GCATC	8 cut(s)	574, 850, 922, 955, 976, 1389, 1646, 2129
MabI	ACCWGGT	1 cut(s)	358
MaeI	CTAG	4 cut(s)	414, 792, 1256, 1778
MaeII	ACGT	3 cut(s)	68, 1162, 1239
MaeIII	GTNAC	6 cut(s)	883, 1235, 1386, 1741, 1783, 1883
MfeI	CAATTG	2 cut(s)	1229, 1715
MflI	RGATCY	4 cut(s)	226, 1139, 1921, 2138
MhlI	GDGCHC	3 cut(s)	9, 549, 604
Mly113I	GGCGCC	1 cut(s)	74
MlyI	GAGTC	5 cut(s)	112, 126, 486, 1666, 2147
MmeI	TCCRAC	3 cut(s)	198, 1793, 2109
Mph1103I	ATGCAT	1 cut(s)	865
MroI	TCCGGA	1 cut(s)	1490
MroXI	GAANNNNTTC	2 cut(s)	1125, 1724
MseI	TTAA	6 cut(s)	365, 371, 506, 521, 825, 1916
MslI	CAYNNNNRTG	2 cut(s)	981, 1748
MspA1I	CMGCKG	3 cut(s)	749, 1872, 1936
MspI	CCGG	3 cut(s)	1277, 1491, 1888
MspR9I	CCNGG	6 cut(s)	39, 360, 406, 842, 1889, 2143
MunI	CAATTG	2 cut(s)	1229, 1715
Mva1269I	GAATGC	2 cut(s)	1567, 2044
MvaI	CCWGG	5 cut(s)	39, 360, 406, 842, 2143
MwoI	GCNNNNNNNGC	8 cut(s)	584, 683, 794, 797, 803, 1408, 1643, 2097
NarI	GGCGCC	1 cut(s)	74
NciI	CCSGG	1 cut(s)	1889
NdeI	CATATG	1 cut(s)	2069
NlaIII	CATG	9 cut(s)	25, 170, 175, 973, 980, 1151, 1217, 1968, 2087
NlaIV	GGNNCC	6 cut(s)	6, 75, 159, 601, 1575, 2140
NmuCI	GTSAC	4 cut(s)	1235, 1386, 1741, 1883
NsiI	ATGCAT	1 cut(s)	865
NspI	RCATGY	2 cut(s)	980, 1968
NspV	TTCGAA	1 cut(s)	1586
OliI	CACNNNNGTG	1 cut(s)	1748
PaeI	GCATGC	1 cut(s)	1968
PaeR7I	CTCGAG	1 cut(s)	341
PaqCI	CACCTGC	1 cut(s)	1715
PciSI	GCTCTTC	3 cut(s)	537, 933, 1131
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PctI	GAATGC	2 cut(s)	1567, 2044
PdmI	GAANNNNTTC	2 cut(s)	1125, 1724
PfeI	GAWTC	7 cut(s)	83, 108, 590, 1195, 1252, 1268, 1951
PkrI	GCNGC	7 cut(s)	20, 685, 769, 787, 790, 799, 1093
PleI	GAGTC	5 cut(s)	111, 125, 485, 1666, 2147
PluTI	GGCGCC	1 cut(s)	77
PpsI	GAGTC	5 cut(s)	111, 125, 485, 1666, 2147
Psp124BI	GAGCTC	1 cut(s)	549
Psp6I	CCWGG	5 cut(s)	37, 358, 404, 840, 2141
PspEI	GGTNACC	1 cut(s)	1783
PspFI	CCCAGC	1 cut(s)	1143
PspGI	CCWGG	5 cut(s)	37, 358, 404, 840, 2141
PspN4I	GGNNCC	6 cut(s)	6, 75, 159, 601, 1575, 2140
PspPI	GGNCC	2 cut(s)	337, 2021
PstI	CTGCAG	1 cut(s)	802
PstNI	CAGNNNCTG	1 cut(s)	683
PsuI	RGATCY	4 cut(s)	226, 1139, 1921, 2138
PvuII	CAGCTG	3 cut(s)	749, 1872, 1936
RsaI	GTAC	3 cut(s)	125, 1173, 2110
RsaNI	GTAC	3 cut(s)	124, 1172, 2109
RseI	CAYNNNNRTG	2 cut(s)	981, 1748
SacI	GAGCTC	1 cut(s)	549
SalI	GTCGAC	1 cut(s)	182
SapI	GCTCTTC	3 cut(s)	537, 933, 1131
SaqAI	TTAA	6 cut(s)	365, 371, 506, 521, 825, 1916
SatI	GCNGC	7 cut(s)	19, 684, 768, 786, 789, 798, 1092
Sau96I	GGNCC	2 cut(s)	337, 2021
SchI	GAGTC	5 cut(s)	112, 126, 486, 1666, 2147
ScrFI	CCNGG	6 cut(s)	39, 360, 406, 842, 1889, 2143
SduI	GDGCHC	3 cut(s)	9, 549, 604
SexAI	ACCWGGT	1 cut(s)	358
SfaNI	GCATC	8 cut(s)	574, 850, 922, 955, 976, 1389, 1646, 2129
SfcI	CTRYAG	4 cut(s)	314, 569, 798, 1791
SfoI	GGCGCC	1 cut(s)	75
Sfr274I	CTCGAG	1 cut(s)	341
SfuI	TTCGAA	1 cut(s)	1586
SinI	GGWCC	2 cut(s)	337, 2021
SlaI	CTCGAG	1 cut(s)	341
SmiMI	CAYNNNNRTG	2 cut(s)	981, 1748
SmlI	CTYRAG	4 cut(s)	341, 485, 1460, 2054
SmoI	CTYRAG	4 cut(s)	341, 485, 1460, 2054
SpeI	ACTAGT	1 cut(s)	413
SphI	GCATGC	1 cut(s)	1968
SsiI	CCGC	6 cut(s)	18, 52, 56, 98, 768, 919
SspDI	GGCGCC	1 cut(s)	73
SspMI	CTAG	4 cut(s)	414, 792, 1256, 1778
SstI	GAGCTC	1 cut(s)	549
StyD4I	CCNGG	6 cut(s)	37, 358, 404, 840, 1887, 2141
TaaI	ACNGT	4 cut(s)	216, 573, 1418, 2104
TaiI	ACGT	3 cut(s)	71, 1165, 1242
TaqII	GACCGA	1 cut(s)	1373
TauI	GCSGC	2 cut(s)	21, 770
TfiI	GAWTC	7 cut(s)	83, 108, 590, 1195, 1252, 1268, 1951
Tru1I	TTAA	6 cut(s)	365, 371, 506, 521, 825, 1916
Tru9I	TTAA	6 cut(s)	365, 371, 506, 521, 825, 1916
TscAI	CASTG	6 cut(s)	193, 1080, 1119, 1395, 1666, 1742
TseFI	GTSAC	4 cut(s)	1235, 1386, 1741, 1883
TseI	GCWGC	5 cut(s)	683, 785, 788, 797, 1091
Tsp45I	GTSAC	4 cut(s)	1235, 1386, 1741, 1883
TspGWI	ACGGA	3 cut(s)	430, 671, 1850
TspRI	CASTG	6 cut(s)	193, 1080, 1119, 1395, 1666, 1742
VpaK11BI	GGWCC	2 cut(s)	337, 2021
XapI	RAATTY	5 cut(s)	514, 847, 1465, 1592, 1692
XceI	RCATGY	2 cut(s)	980, 1968
XhoI	CTCGAG	1 cut(s)	341
XmiI	GTMKAC	1 cut(s)	183
XmnI	GAANNNNTTC	2 cut(s)	1125, 1724
XspI	CTAG	4 cut(s)	414, 792, 1256, 1778
Zsp2I	ATGCAT	1 cut(s)	865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.