Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006441

Physical Location & Seq

Genomic Coordinates Reverse (-)

5636102 .. 5642856

Gene Structure 6755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00163360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGAGCGGCGCCAAGGCCATCAGCCTCGAGGAGATCAAAAACGAGTCCGTCGATCTGGAACGGATTCCAATTGAGGAAGTCTTTGAGCAGTTGAAATGTACAAGGGAAGGTCTTACCTCCGACGAGGGTCAGAACAGGCTCCAAGTCTTTGGACCAAACAAGTTAGAGGAGAAAAAGGATTTTGTCGGAATTATGGTCCTGCTGGTCGTTAACTCTACCATCAGTTTTATTGAGGAAAACAATGCTGGTAATGCGGCTGCTGCACTTATGGCTGGTCTTGCTCCTAAGACTAAGGTCCTCAGAGATGGTCGATGGACAGAGCAAGAGGCTTCAATTTTGGTTCCAGGAGACATAATCAGCATTAAGTTGGGAGATATAGTACCTGCTGATGCTCGCCTTCTTGAGGGTGATCCTCTGAAAATTGACCAGTCTGCCCTAACCGGCGAGTCCCTTGCTGTTACTAAAAATCCTGGAGATGAAGTGTTTTCTGGCTCAACATGTAAACAGGGTGAAATTGAAGCAGTGGTCATTGCAACTGGTGTGCACACCTTCTTTGGTAAAGCTGCACATCTTGTGGACAGCACCAACAATGTTGGGCATTTCCAGCAAGTTCTCACAGCAATTGGAAACTTCTGCATTTGTTCAATTGGTGTGGGAATACTTATTGAAATTGTTGTCATGTACCCAATTCAGAAGCGCAAGTACAGGGATGGGATTGATAATTTGCTGGTTCTCTTGATTGGTGGAATCCCAATTGCTATGCCGACTGTTTTATCTGTCACGATGGCTATAGGTTCTCACAGGCTTTCTCAGCAAGGTGCTATTACTAAGAGAATGACTGCCATTGAGGAAATGGCTGGCATGGATGTACTATGCAGTGATAAGACTGGGACCTTGACCCTGAACAAGCTGACAGTTGATAGAAATCTGATTGAAGTGTTTCCCAAGGGTGTGGAGAAAGAGCATGTTATCCTTCTTGCAGCAAGGGCTTCTAGAACTGAAAATCAGGATGCTATTGATGCTGCCATAGTAAATATGCTAGCTGATCCAAAGGAGGCGCGAGCTGGTGTCAGAGAAATCCATTTCCTTCCATTCAACCCTGTTGACAAGAGGACTGCTTTAACCTACATTGATTCTGATGGGAATTGGCATCGATCTAGCAAAGGTGCCCCTGAGCAGATATTAACCCTATGCAACTGCAAGGAAGATTTCAAGAAAAAGGTTCATGCCGTGATTGATAAATTTGCTGAACGTGGGCTTCGATCTCTTGGGGTTGCAAGACAGCAAATTCCTGAGAAAACAAAAGAGAGTCCAGGAGCACCATGGCAGTTTGTTGGTTTGTTGCCATTATTTGATCCTCCCAGGCATGACAGTGCAGAAACTATTCGCAGAGCTCTCAATCTTGGTGTGAATGTGAAGATGATCACTGGGGATCAGCTGGCCATTGGCAAGGAAACTGGACGGCGGCTTGGTATGGGAACAAACATGTATCCATCTTCTGCATTGCTTGGCCAAGACAAGGATGCGTCCATTTCTGCCCTCCCCATTGACGAATTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCAGACATTGGAATTGCTGTAGCTGATGCTACTGATGCTGCTAGAGGTGCTTCAGATATTGTTCTGACTGAACCTGGGTTAAGTGTGATAATCAGTGCAGTACTTACAAGCCGGGCCATATTTCAGAGGATGAAGAACTATACTATCTACGCCGTTTCAATTACCATACGTATAGTGTTTGGCTTTATGCTCATCGCTTTGATATGGAAGTTTGACTTTGCACCCTTCATGGTATTGATCATTGCTATACTAAATGATGGAACAATCATGACAATATCCAAGGACCGAGTGAAACCATCTCCAATGCCGGACAGCTGGAAACTGAAAGAAATTTTTGCTACTGGCATTGTTCTTGGAGGTTACATGGCCTTGATGACAGTAGTGTTCTTTTGGTTGATGCAGGATACAAACTTCTTCTCGAAGACGTTTGGTGTGCGATCTTTGAGGAATAGCGATAGTGAAATGATGGCAGCGTTATACTTACAAGTGAGTATTATTAGCCAAGCCCTTATCTTTGTCACAAGGTCCAGAGGATTTTCCTTTGCGGAACGCCCTGGACTTCTCTTGCTTGGAGCTTTCATCGTTGCTCAATTGGTGGCGACTCTGATAGCGGTCTATGCCAGCTGGGGTTTTGCACGGATAAAGGGATGTGGCTGGGGATGGGCTGGTGTTATCTGGCTTTTCAGTGTGTTGACATATATTCCTCTTGATTTTCTGAAGTTTGCAATCCGCTACATCCTTAGTGGAAAAGCTTGGGATAACCTTTTGGAGAACAAGACTGCGTTTACTACAAAGAAAGACTATGGAAAAGAGGAGAGAGAAGCACAGTGGGCTACCGCACAAAGGACCCTACATGGTCTTCAACCACCTGAAAGCAGCAATATCTTCAGTGACAAGAGCAGTTACCGGGAACTGTCAGAGATTGCAGAACAAGCCAAGAGAAGGGCTGAGGTTGCAAGGCTTAGGGAGTTGACTACATTGAAGGGTCATGTTGAGTCTGTCGTGAAGCTGAAAGGGCTCGACATAGATAATATCCAACAGCATTATACAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

881

Amino Acids

96.69

Weight (kDa)

6.52

Isoelectric Point (pI)

37.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	21 - 59	6.9e-08	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	94 - 192	3.9e-30	P-type ATPase actuator domain
Cation_ATPase	PF13246	335 - 456	4.1e-06	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24520 AT2G24520 AT2G24520 AT2G24520
fragaria_vesca	FvH4_2g36880 FvH4_2g36880 FvH4_2g36880
malus_domestica	MD08G1130200.v1.1 MD15G1108400.v1.1
prunus_persica	Prupe.1G460700_v2.0.a1 Prupe.1G460700_v2.0.a1
pyrus_communis	pycom03g01500 pycom08g10940
rosa_chinensis	RchiOBHm_Chr6g0304901
rosa_laevigata	RLG00000010940
rosa_multiflora	Rmu_co8372769.1_g000001 Rmu_ssc0000278.1_g000001 Rmu_ssc0000278.1_g000002
rosa_roxburghii	Rroxscaffold_7G00163360
rosa_rugosa	Rorug06G0336100 Rorug06G0336100
rosa_samantha	Rh6AG447400 Rh6BG454100 Rh6CG460900 Rh6DG447900
rosa_wichuraiana	Rw6G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	26
Acc36I	ACCTGC	1 cut(s)	391
AccB1I	GGYRCC	2 cut(s)	8, 1166
AccB7I	CCANNNNNTGG	1 cut(s)	1598
AccBSI	CCGCTC	1 cut(s)	6
AccII	CGCG	1 cut(s)	1060
AciI	CCGC	7 cut(s)	6, 254, 1465, 2135, 2201, 2320, 2427
AclWI	GGATC	4 cut(s)	404, 1040, 1349, 1440
AcoI	YGGCCR	2 cut(s)	1440, 1510
AcsI	RAATTY	3 cut(s)	1241, 1287, 1920
AcuI	CTGAAG	3 cut(s)	1626, 2327, 2461
AcyI	GRCGYC	1 cut(s)	9
AfaI	GTAC	6 cut(s)	100, 381, 683, 704, 870, 1692
AfiI	CCNNNNNNNGG	5 cut(s)	403, 1519, 1598, 2433, 2532
AflIII	ACRYGT	2 cut(s)	497, 1485
AjnI	CCWGG	6 cut(s)	343, 469, 1312, 1361, 1663, 2143
Alw21I	GWGCWC	3 cut(s)	546, 1321, 1396
Alw26I	GTCTC	1 cut(s)	342
Alw44I	GTGCAC	1 cut(s)	542
AlwI	GGATC	4 cut(s)	404, 1040, 1349, 1440
Ama87I	CYCGRG	1 cut(s)	26
AoxI	GGCC	5 cut(s)	15, 1440, 1510, 1704, 1956
ApaLI	GTGCAC	1 cut(s)	542
ApeKI	GCWGC	8 cut(s)	257, 260, 563, 980, 1022, 1628, 2060, 2466
ApoI	RAATTY	3 cut(s)	1241, 1287, 1920
Asp700I	GAANNNNTTC	3 cut(s)	63, 939, 1383
AspLEI	GCGC	3 cut(s)	11, 699, 1060
AspS9I	GGNCC	8 cut(s)	152, 196, 295, 891, 1704, 1873, 2115, 2436
AsuC2I	CCSGG	2 cut(s)	1703, 2498
AsuHPI	GGTGA	2 cut(s)	419, 521
AsuNHI	GCTAGC	1 cut(s)	1039
AvaI	CYCGRG	1 cut(s)	26
AvaII	GGWCC	7 cut(s)	152, 196, 295, 891, 1873, 2115, 2436
BaeGI	GKGCMC	2 cut(s)	546, 1171
BalI	TGGCCA	2 cut(s)	1442, 1512
BanI	GGYRCC	2 cut(s)	8, 1166
BanII	GRGCYC	2 cut(s)	1396, 2610
BarI	GAAGNNNNNNTAC	2 cut(s)	686, 718
BbsI	GAAGAC	2 cut(s)	2018, 2441
Bbv12I	GWGCWC	3 cut(s)	546, 1321, 1396
BbvCI	CCTCAGC	1 cut(s)	2538
BbvI	GCAGC	8 cut(s)	244, 247, 550, 992, 1009, 1615, 2072, 2478
BceAI	ACGGC	3 cut(s)	1214, 1478, 1727
BcgI	CGANNNNNNTGC	2 cut(s)	434, 468
BciT130I	CCWGG	6 cut(s)	345, 471, 1314, 1363, 1665, 2145
BciVI	GTATCC	2 cut(s)	1500, 1987
BclI	TGATCA	2 cut(s)	1422, 1827
BcnI	CCSGG	2 cut(s)	1703, 2498
BcoDI	GTCTC	1 cut(s)	342
BfaI	CTAG	4 cut(s)	993, 1040, 1158, 1632
BfmI	CTRYAG	2 cut(s)	789, 1608
BfoI	RGCGCY	1 cut(s)	12
BfuAI	ACCTGC	1 cut(s)	391
BfuI	GTATCC	2 cut(s)	1500, 1987
BmcAI	AGTACT	1 cut(s)	1692
Bme1390I	CCNGG	8 cut(s)	345, 471, 1314, 1363, 1665, 1703, 2145, 2498
Bme18I	GGWCC	7 cut(s)	152, 196, 295, 891, 1873, 2115, 2436
BmeT110I	CYCGRG	1 cut(s)	26
BmgT120I	GGNCC	8 cut(s)	152, 196, 295, 891, 1704, 1873, 2115, 2436
BmiI	GGNNCC	6 cut(s)	10, 140, 342, 892, 1168, 2438
BmrFI	CCNGG	8 cut(s)	345, 471, 1314, 1363, 1665, 1703, 2145, 2498
BmrI	ACTGGG	2 cut(s)	897, 1437
BmsI	GCATC	8 cut(s)	379, 1000, 1009, 1159, 1513, 1606, 1615, 1977
BmtI	GCTAGC	1 cut(s)	1043
BmuI	ACTGGG	2 cut(s)	897, 1437
BoxI	GACNNNNGTC	2 cut(s)	126, 293
BpiI	GAAGAC	2 cut(s)	2018, 2441
BpmI	CTGGAG	2 cut(s)	492, 1602
Bpu10I	CCTNAGC	3 cut(s)	1173, 2538, 2552
BpuEI	CTTGAG	1 cut(s)	422
BpuMI	CCSGG	2 cut(s)	1703, 2498
Bsa29I	ATCGAT	1 cut(s)	1153
BsaAI	YACGTR	1 cut(s)	1760
BsaBI	GATNNNNATC	1 cut(s)	924
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	7 cut(s)	12, 945, 1322, 1361, 1664, 1869, 2143
BsaXI	ACNNNNNCTCC	4 cut(s)	363, 393, 465, 495
Bsc4I	CCNNNNNNNGG	5 cut(s)	403, 1519, 1598, 2433, 2532
Bse118I	RCCGGY	1 cut(s)	440
Bse1I	ACTGG	6 cut(s)	427, 541, 892, 1432, 1462, 1936
Bse3DI	GCAATG	3 cut(s)	528, 1502, 1830
Bse8I	GATNNNNATC	1 cut(s)	924
BseBI	CCWGG	6 cut(s)	345, 471, 1314, 1363, 1665, 2145
BseCI	ATCGAT	1 cut(s)	1153
BseDI	CCNNGG	7 cut(s)	12, 945, 1322, 1361, 1664, 1869, 2143
BseGI	GGATG	8 cut(s)	715, 871, 1015, 1528, 1725, 2243, 2255, 2325
BseJI	GATNNNNATC	1 cut(s)	924
BseLI	CCNNNNNNNGG	5 cut(s)	403, 1519, 1598, 2433, 2532
BseMI	GCAATG	3 cut(s)	528, 1502, 1830
BseMII	CTCAG	5 cut(s)	313, 824, 1164, 1284, 2529
BseNI	ACTGG	6 cut(s)	427, 541, 892, 1432, 1462, 1936
BseRI	GAGGAG	3 cut(s)	44, 182, 2417
BseSI	GKGCMC	2 cut(s)	546, 1171
BseXI	GCAGC	8 cut(s)	244, 247, 550, 992, 1009, 1615, 2072, 2478
BseYI	CCCAGC	2 cut(s)	2214, 2244
BsgI	GTGCAG	4 cut(s)	246, 549, 1395, 1707
Bsh1236I	CGCG	1 cut(s)	1060
BshFI	GGCC	5 cut(s)	17, 1442, 1512, 1706, 1958
BshNI	GGYRCC	2 cut(s)	8, 1166
BshVI	ATCGAT	1 cut(s)	1153
BsiHKAI	GWGCWC	3 cut(s)	546, 1321, 1396
BsiHKCI	CYCGRG	1 cut(s)	26
BsiSI	CCGG	4 cut(s)	441, 1702, 1898, 2497
BslFI	GGGAC	2 cut(s)	433, 904
BslI	CCNNNNNNNGG	5 cut(s)	403, 1519, 1598, 2433, 2532
BsmAI	GTCTC	1 cut(s)	342
BsmFI	GGGAC	2 cut(s)	433, 904
BsnI	GGCC	5 cut(s)	17, 1442, 1512, 1706, 1958
BsoBI	CYCGRG	1 cut(s)	26
Bsp1286I	GDGCHC	5 cut(s)	546, 1171, 1321, 1396, 2610
Bsp1407I	TGTACA	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	1322
BspACI	CCGC	7 cut(s)	6, 254, 1465, 2135, 2201, 2320, 2427
BspANI	GGCC	5 cut(s)	17, 1442, 1512, 1706, 1958
BspCNI	CTCAG	5 cut(s)	312, 823, 1165, 1285, 2530
BspDI	ATCGAT	1 cut(s)	1153
BspFNI	CGCG	1 cut(s)	1060
BspHI	TCATGA	1 cut(s)	1857
BspLI	GGNNCC	6 cut(s)	10, 140, 342, 892, 1168, 2438
BspMI	ACCTGC	1 cut(s)	391
BspOI	GCTAGC	1 cut(s)	1043
BspPI	GGATC	4 cut(s)	404, 1040, 1349, 1440
BspT107I	GGYRCC	2 cut(s)	8, 1166
BsrBI	CCGCTC	1 cut(s)	6
BsrDI	GCAATG	3 cut(s)	528, 1502, 1830
BsrFI	RCCGGY	1 cut(s)	440
BsrGI	TGTACA	1 cut(s)	98
BsrI	ACTGG	6 cut(s)	427, 541, 892, 1432, 1462, 1936
BssAI	RCCGGY	1 cut(s)	440
BssECI	CCNNGG	7 cut(s)	12, 945, 1322, 1361, 1664, 1869, 2143
BssNI	GRCGYC	1 cut(s)	9
BssT1I	CCWWGG	4 cut(s)	12, 945, 1322, 1869
Bst2UI	CCWGG	6 cut(s)	345, 471, 1314, 1363, 1665, 2145
Bst4CI	ACNGT	7 cut(s)	769, 916, 1373, 1969, 2418, 2505, 2641
BstACI	GRCGYC	1 cut(s)	9
BstAUI	TGTACA	1 cut(s)	98
BstBAI	YACGTR	1 cut(s)	1760
BstC8I	GCNNGC	6 cut(s)	394, 859, 1041, 1062, 1440, 2212
BstDSI	CCRYGG	1 cut(s)	1322
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	8 cut(s)	715, 871, 1015, 1528, 1725, 2243, 2255, 2325
BstFNI	CGCG	1 cut(s)	1060
BstH2I	RGCGCY	1 cut(s)	12
BstHHI	GCGC	3 cut(s)	11, 699, 1060
BstMAI	GTCTC	1 cut(s)	342
BstNI	CCWGG	6 cut(s)	345, 471, 1314, 1363, 1665, 2145
BstNSI	RCATGY	3 cut(s)	501, 968, 1489
BstPAI	GACNNNNGTC	2 cut(s)	126, 293
BstSCI	CCNGG	8 cut(s)	343, 469, 1312, 1361, 1663, 1701, 2143, 2496
BstSFI	CTRYAG	2 cut(s)	789, 1608
BstSLI	GKGCMC	2 cut(s)	546, 1171
BstSNI	TACGTA	1 cut(s)	1760
BstUI	CGCG	1 cut(s)	1060
BstV1I	GCAGC	8 cut(s)	244, 247, 550, 992, 1009, 1615, 2072, 2478
BstV2I	GAAGAC	2 cut(s)	2018, 2441
BstXI	CCANNNNNNTGG	2 cut(s)	149, 952
Bsu15I	ATCGAT	1 cut(s)	1153
BsuI	GTATCC	2 cut(s)	1500, 1987
BsuRI	GGCC	5 cut(s)	17, 1442, 1512, 1706, 1958
BsuTUI	ATCGAT	1 cut(s)	1153
BtgI	CCRYGG	1 cut(s)	1322
BtgZI	GCGATG	1 cut(s)	1768
BtsCI	GGATG	8 cut(s)	715, 871, 1015, 1528, 1725, 2243, 2255, 2325
BtsI	GCAGTG	2 cut(s)	528, 883
BtsIMutI	CAGTG	8 cut(s)	528, 883, 1378, 1425, 1690, 2281, 2423, 2485
BveI	ACCTGC	1 cut(s)	391
Cac8I	GCNNGC	6 cut(s)	394, 859, 1041, 1062, 1440, 2212
CciI	TCATGA	1 cut(s)	1857
CfoI	GCGC	3 cut(s)	11, 699, 1060
Cfr10I	RCCGGY	1 cut(s)	440
Cfr13I	GGNCC	8 cut(s)	152, 196, 295, 891, 1704, 1873, 2115, 2436
ClaI	ATCGAT	1 cut(s)	1153
CseI	GACGC	1 cut(s)	1515
Csp6I	GTAC	6 cut(s)	99, 380, 682, 703, 869, 1691
CspCI	CAANNNNNGTGG	2 cut(s)	633, 668
CviQI	GTAC	6 cut(s)	99, 380, 682, 703, 869, 1691
DinI	GGCGCC	1 cut(s)	10
EaeI	YGGCCR	2 cut(s)	1440, 1510
Ecl136II	GAGCTC	1 cut(s)	1394
Eco105I	TACGTA	1 cut(s)	1760
Eco130I	CCWWGG	4 cut(s)	12, 945, 1322, 1869
Eco24I	GRGCYC	2 cut(s)	1396, 2610
Eco47I	GGWCC	7 cut(s)	152, 196, 295, 891, 1873, 2115, 2436
Eco53kI	GAGCTC	1 cut(s)	1394
Eco57I	CTGAAG	3 cut(s)	1626, 2327, 2461
Eco88I	CYCGRG	1 cut(s)	26
EcoICRI	GAGCTC	1 cut(s)	1394
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	3 cut(s)	295, 891, 2436
EcoRII	CCWGG	6 cut(s)	343, 469, 1312, 1361, 1663, 2143
EcoT14I	CCWWGG	4 cut(s)	12, 945, 1322, 1869
EcoT38I	GRGCYC	2 cut(s)	1396, 2610
EgeI	GGCGCC	1 cut(s)	10
EheI	GGCGCC	1 cut(s)	10
ErhI	CCWWGG	4 cut(s)	12, 945, 1322, 1869
FalI	AAGNNNNNCTT	2 cut(s)	1790, 1822
FaqI	GGGAC	2 cut(s)	433, 904
FbaI	TGATCA	2 cut(s)	1422, 1827
FokI	GGATG	8 cut(s)	722, 878, 1022, 1535, 1732, 2250, 2262, 2312
FriOI	GRGCYC	2 cut(s)	1396, 2610
FspBI	CTAG	4 cut(s)	993, 1040, 1158, 1632
GlaI	GCGC	3 cut(s)	10, 698, 1059
GsaI	CCCAGC	2 cut(s)	2218, 2248
GsuI	CTGGAG	2 cut(s)	492, 1602
HaeII	RGCGCY	1 cut(s)	12
HaeIII	GGCC	5 cut(s)	17, 1442, 1512, 1706, 1958
HapII	CCGG	4 cut(s)	441, 1702, 1898, 2497
HgaI	GACGC	1 cut(s)	1515
HhaI	GCGC	3 cut(s)	11, 699, 1060
Hin1I	GRCGYC	1 cut(s)	9
Hin6I	GCGC	3 cut(s)	9, 697, 1058
HinP1I	GCGC	3 cut(s)	9, 697, 1058
HincII	GTYRAC	4 cut(s)	211, 1105, 2283, 2562
HindII	GTYRAC	4 cut(s)	211, 1105, 2283, 2562
HindIII	AAGCTT	1 cut(s)	2340
HinfI	GANTC	8 cut(s)	44, 64, 446, 747, 1133, 1309, 2191, 2585
HpaI	GTTAAC	1 cut(s)	211
HpaII	CCGG	4 cut(s)	441, 1702, 1898, 2497
HphI	GGTGA	2 cut(s)	419, 521
Hpy166II	GTNNAC	8 cut(s)	211, 503, 544, 577, 1105, 2283, 2376, 2562
Hpy8I	GTNNAC	8 cut(s)	211, 503, 544, 577, 1105, 2283, 2376, 2562
Hpy99I	CGWCG	2 cut(s)	53, 125
HpyAV	CCTTC	9 cut(s)	101, 407, 559, 983, 1097, 1558, 1825, 2526, 2566
HpyCH4III	ACNGT	7 cut(s)	769, 916, 1373, 1969, 2418, 2505, 2641
HpyCH4IV	ACGT	3 cut(s)	1252, 1759, 2015
HpySE526I	ACGT	3 cut(s)	1252, 1759, 2015
Hsp92I	GRCGYC	1 cut(s)	9
HspAI	GCGC	3 cut(s)	9, 697, 1058
KasI	GGCGCC	1 cut(s)	8
Ksp22I	TGATCA	2 cut(s)	1422, 1827
KspAI	GTTAAC	1 cut(s)	211
LmnI	GCTCC	4 cut(s)	144, 286, 1316, 2162
Lsp1109I	GCAGC	8 cut(s)	244, 247, 550, 992, 1009, 1615, 2072, 2478
LweI	GCATC	8 cut(s)	379, 1000, 1009, 1159, 1513, 1606, 1615, 1977
MaeI	CTAG	4 cut(s)	993, 1040, 1158, 1632
MaeII	ACGT	3 cut(s)	1252, 1759, 2015
MaeIII	GTNAC	6 cut(s)	457, 778, 1949, 2107, 2480, 2492
MbiI	CCGCTC	1 cut(s)	6
MboII	GAAGA	8 cut(s)	1217, 1429, 1488, 1735, 1996, 2023, 2441, 2467
MfeI	CAATTG	5 cut(s)	69, 621, 645, 753, 2180
MhlI	GDGCHC	5 cut(s)	546, 1171, 1321, 1396, 2610
MlsI	TGGCCA	2 cut(s)	1442, 1512
MluNI	TGGCCA	2 cut(s)	1442, 1512
Mly113I	GGCGCC	1 cut(s)	9
MlyI	GAGTC	5 cut(s)	53, 455, 1318, 2185, 2594
MmeI	TCCRAC	2 cut(s)	144, 166
Mox20I	TGGCCA	2 cut(s)	1442, 1512
MroXI	GAANNNNTTC	3 cut(s)	63, 939, 1383
MscI	TGGCCA	2 cut(s)	1442, 1512
MseI	TTAA	5 cut(s)	210, 363, 1121, 1184, 1670
MslI	CAYNNNNRTG	1 cut(s)	1371
Msp20I	TGGCCA	2 cut(s)	1442, 1512
MspA1I	CMGCKG	3 cut(s)	1438, 1905, 2214
MspI	CCGG	4 cut(s)	441, 1702, 1898, 2497
MspR9I	CCNGG	8 cut(s)	345, 471, 1314, 1363, 1665, 1703, 2145, 2498
MunI	CAATTG	5 cut(s)	69, 621, 645, 753, 2180
MvaI	CCWGG	6 cut(s)	345, 471, 1314, 1363, 1665, 2145
MvnI	CGCG	1 cut(s)	1060
NarI	GGCGCC	1 cut(s)	9
NciI	CCSGG	2 cut(s)	1703, 2498
NcoI	CCATGG	1 cut(s)	1322
NheI	GCTAGC	1 cut(s)	1039
NlaIV	GGNNCC	6 cut(s)	10, 140, 342, 892, 1168, 2438
NmuCI	GTSAC	3 cut(s)	778, 2107, 2480
NspI	RCATGY	3 cut(s)	501, 968, 1489
PaeR7I	CTCGAG	1 cut(s)	26
PagI	TCATGA	1 cut(s)	1857
PciI	ACATGT	2 cut(s)	497, 1485
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 1258
PdmI	GAANNNNTTC	3 cut(s)	63, 939, 1383
PfeI	GAWTC	3 cut(s)	64, 747, 1133
PflMI	CCANNNNNTGG	1 cut(s)	1598
PfoI	TCCNGGA	3 cut(s)	343, 469, 1312
PleI	GAGTC	5 cut(s)	52, 454, 1317, 2185, 2593
PluTI	GGCGCC	1 cut(s)	12
PpsI	GAGTC	5 cut(s)	52, 454, 1317, 2185, 2593
Ppu21I	YACGTR	1 cut(s)	1760
PpuMI	RGGWCCY	3 cut(s)	295, 891, 2436
PscI	ACATGT	2 cut(s)	497, 1485
PshAI	GACNNNNGTC	2 cut(s)	126, 293
Psp124BI	GAGCTC	1 cut(s)	1396
Psp5II	RGGWCCY	3 cut(s)	295, 891, 2436
Psp6I	CCWGG	6 cut(s)	343, 469, 1312, 1361, 1663, 2143
PspFI	CCCAGC	2 cut(s)	2214, 2244
PspGI	CCWGG	6 cut(s)	343, 469, 1312, 1361, 1663, 2143
PspN4I	GGNNCC	6 cut(s)	10, 140, 342, 892, 1168, 2438
PspPI	GGNCC	8 cut(s)	152, 196, 295, 891, 1704, 1873, 2115, 2436
PspPPI	RGGWCCY	3 cut(s)	295, 891, 2436
PspXI	VCTCGAGB	1 cut(s)	26
PvuII	CAGCTG	3 cut(s)	1438, 1905, 2214
RsaI	GTAC	6 cut(s)	100, 381, 683, 704, 870, 1692
RsaNI	GTAC	6 cut(s)	99, 380, 682, 703, 869, 1691
RseI	CAYNNNNRTG	1 cut(s)	1371
SacI	GAGCTC	1 cut(s)	1396
SaqAI	TTAA	5 cut(s)	210, 363, 1121, 1184, 1670
Sau96I	GGNCC	8 cut(s)	152, 196, 295, 891, 1704, 1873, 2115, 2436
ScaI	AGTACT	1 cut(s)	1692
SchI	GAGTC	5 cut(s)	53, 455, 1318, 2185, 2594
ScrFI	CCNGG	8 cut(s)	345, 471, 1314, 1363, 1665, 1703, 2145, 2498
SduI	GDGCHC	5 cut(s)	546, 1171, 1321, 1396, 2610
SfaNI	GCATC	8 cut(s)	379, 1000, 1009, 1159, 1513, 1606, 1615, 1977
SfcI	CTRYAG	2 cut(s)	789, 1608
SfoI	GGCGCC	1 cut(s)	10
Sfr274I	CTCGAG	1 cut(s)	26
SinI	GGWCC	7 cut(s)	152, 196, 295, 891, 1873, 2115, 2436
SlaI	CTCGAG	1 cut(s)	26
SmiMI	CAYNNNNRTG	1 cut(s)	1371
SmlI	CTYRAG	2 cut(s)	26, 401
SmoI	CTYRAG	2 cut(s)	26, 401
SnaBI	TACGTA	1 cut(s)	1760
SsiI	CCGC	7 cut(s)	6, 254, 1465, 2135, 2201, 2320, 2427
SspDI	GGCGCC	1 cut(s)	8
SspMI	CTAG	4 cut(s)	993, 1040, 1158, 1632
SstI	GAGCTC	1 cut(s)	1396
StyD4I	CCNGG	8 cut(s)	343, 469, 1312, 1361, 1663, 1701, 2143, 2496
StyI	CCWWGG	4 cut(s)	12, 945, 1322, 1869
TaaI	ACNGT	7 cut(s)	769, 916, 1373, 1969, 2418, 2505, 2641
TaiI	ACGT	3 cut(s)	1255, 1762, 2018
TaqI	TCGA	7 cut(s)	27, 51, 310, 1153, 1261, 2009, 2610
TaqII	GACCGA	1 cut(s)	1890
TatI	WGTACW	4 cut(s)	98, 702, 868, 1690
TauI	GCSGC	3 cut(s)	9, 257, 1468
TfiI	GAWTC	3 cut(s)	64, 747, 1133
Tru1I	TTAA	5 cut(s)	210, 363, 1121, 1184, 1670
Tru9I	TTAA	5 cut(s)	210, 363, 1121, 1184, 1670
TscAI	CASTG	8 cut(s)	528, 883, 1378, 1432, 1690, 2281, 2423, 2485
TseFI	GTSAC	3 cut(s)	778, 2107, 2480
TseI	GCWGC	8 cut(s)	257, 260, 563, 980, 1022, 1628, 2060, 2466
Tsp45I	GTSAC	3 cut(s)	778, 2107, 2480
TspDTI	ATGAA	5 cut(s)	492, 1214, 1736, 1807, 2158
TspGWI	ACGGA	3 cut(s)	37, 76, 2242
TspRI	CASTG	8 cut(s)	528, 883, 1378, 1432, 1690, 2281, 2423, 2485
Van91I	CCANNNNNTGG	1 cut(s)	1598
VneI	GTGCAC	1 cut(s)	542
VpaK11BI	GGWCC	7 cut(s)	152, 196, 295, 891, 1873, 2115, 2436
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	3 cut(s)	1241, 1287, 1920
XbaI	TCTAGA	1 cut(s)	992
XceI	RCATGY	3 cut(s)	501, 968, 1489
XcmI	CCANNNNNNNNNTGG	2 cut(s)	850, 1320
XhoI	CTCGAG	1 cut(s)	26
XmnI	GAANNNNTTC	3 cut(s)	63, 939, 1383
XspI	CTAG	4 cut(s)	993, 1040, 1158, 1632
ZrmI	AGTACT	1 cut(s)	1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.