No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0316531 RchiOBHm_Chr1g0355431 RchiOBHm_Chr1g0357631 RchiOBHm_Chr5g0055631 RchiOBHm_Chr5g0082601 |
| rosa_multiflora | Rmu_co8371173.1_g000001 Rmu_sc0002037.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00183280 |
| rosa_samantha | Rh1DG078000 Rh1DG257300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 69 |
| AcsI | RAATTY | 1 cut(s) | 168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 67 |
| AgsI | TTSAA | 1 cut(s) | 28 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 76, 108 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| Ama87I | CYCGRG | 1 cut(s) | 61 |
| AoxI | GGCC | 1 cut(s) | 69 |
| ApoI | RAATTY | 1 cut(s) | 168 |
| AsuC2I | CCSGG | 2 cut(s) | 62, 63 |
| AsuII | TTCGAA | 1 cut(s) | 82 |
| AvaI | CYCGRG | 1 cut(s) | 61 |
| BalI | TGGCCA | 1 cut(s) | 71 |
| BcnI | CCSGG | 2 cut(s) | 62, 63 |
| BglII | AGATCT | 1 cut(s) | 53 |
| Bme1390I | CCNGG | 2 cut(s) | 62, 63 |
| BmeT110I | CYCGRG | 1 cut(s) | 61 |
| BmrFI | CCNGG | 2 cut(s) | 62, 63 |
| BmsI | GCATC | 1 cut(s) | 17 |
| Bpu14I | TTCGAA | 1 cut(s) | 82 |
| BpuMI | CCSGG | 2 cut(s) | 62, 63 |
| BsaJI | CCNNGG | 1 cut(s) | 61 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 67 |
| BseDI | CCNNGG | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 67 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BsiHKCI | CYCGRG | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 62 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 67 |
| BsnI | GGCC | 1 cut(s) | 71 |
| BsoBI | CYCGRG | 1 cut(s) | 61 |
| Bsp119I | TTCGAA | 1 cut(s) | 82 |
| Bsp143I | GATC | 1 cut(s) | 53 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspT104I | TTCGAA | 1 cut(s) | 82 |
| BssECI | CCNNGG | 1 cut(s) | 61 |
| BssMI | GATC | 1 cut(s) | 53 |
| Bst6I | CTCTTC | 1 cut(s) | 22 |
| BstBI | TTCGAA | 1 cut(s) | 82 |
| BstKTI | GATC | 1 cut(s) | 56 |
| BstMBI | GATC | 1 cut(s) | 53 |
| BstSCI | CCNGG | 2 cut(s) | 60, 61 |
| BstX2I | RGATCY | 1 cut(s) | 53 |
| BstYI | RGATCY | 1 cut(s) | 53 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| Cfr9I | CCCGGG | 1 cut(s) | 61 |
| CviJI | RGCY | 2 cut(s) | 71, 149 |
| CviKI_1 | RGCY | 2 cut(s) | 71, 149 |
| DpnI | GATC | 1 cut(s) | 55 |
| DpnII | GATC | 1 cut(s) | 53 |
| EaeI | YGGCCR | 1 cut(s) | 69 |
| Eam1104I | CTCTTC | 1 cut(s) | 22 |
| EarI | CTCTTC | 1 cut(s) | 22 |
| Eco88I | CYCGRG | 1 cut(s) | 61 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 62 |
| HpaII | CCGG | 1 cut(s) | 62 |
| Hpy188I | TCNGA | 1 cut(s) | 43 |
| HpyAV | CCTTC | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 1 cut(s) | 8 |
| Kzo9I | GATC | 1 cut(s) | 53 |
| LmnI | GCTCC | 2 cut(s) | 43, 154 |
| LpnPI | CCDG | 2 cut(s) | 75, 166 |
| LweI | GCATC | 1 cut(s) | 17 |
| MalI | GATC | 1 cut(s) | 55 |
| MboI | GATC | 1 cut(s) | 53 |
| MboII | GAAGA | 2 cut(s) | 9, 12 |
| MfeI | CAATTG | 1 cut(s) | 73 |
| MflI | RGATCY | 1 cut(s) | 53 |
| MlsI | TGGCCA | 1 cut(s) | 71 |
| MluCI | AATT | 5 cut(s) | 36, 73, 131, 140, 168 |
| MluNI | TGGCCA | 1 cut(s) | 71 |
| Mox20I | TGGCCA | 1 cut(s) | 71 |
| MscI | TGGCCA | 1 cut(s) | 71 |
| Msp20I | TGGCCA | 1 cut(s) | 71 |
| MspI | CCGG | 1 cut(s) | 62 |
| MspR9I | CCNGG | 2 cut(s) | 62, 63 |
| MunI | CAATTG | 1 cut(s) | 73 |
| NciI | CCSGG | 2 cut(s) | 62, 63 |
| NdeII | GATC | 1 cut(s) | 53 |
| NspV | TTCGAA | 1 cut(s) | 82 |
| PsuI | RGATCY | 1 cut(s) | 53 |
| Sau3AI | GATC | 1 cut(s) | 53 |
| ScrFI | CCNGG | 2 cut(s) | 62, 63 |
| SetI | ASST | 2 cut(s) | 117, 151 |
| SfaNI | GCATC | 1 cut(s) | 17 |
| SfuI | TTCGAA | 1 cut(s) | 82 |
| SgeI | CNNG | 7 cut(s) | 59, 73, 74, 75, 124, 158, 165 |
| SmaI | CCCGGG | 1 cut(s) | 63 |
| Sse9I | AATT | 5 cut(s) | 36, 73, 131, 140, 168 |
| StyD4I | CCNGG | 2 cut(s) | 60, 61 |
| TaqI | TCGA | 2 cut(s) | 82, 157 |
| TasI | AATT | 5 cut(s) | 36, 73, 131, 140, 168 |
| TspDTI | ATGAA | 1 cut(s) | 12 |
| TspMI | CCCGGG | 1 cut(s) | 61 |
| XapI | RAATTY | 1 cut(s) | 168 |
| XmaI | CCCGGG | 1 cut(s) | 61 |