Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010996

Physical Location & Seq

Genomic Coordinates Forward (+)

27998198 .. 28004132

Gene Structure 5935 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00188410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGGCTGCGCGAGCTCCAAGCTCGACGACCTGCCGGCGGTGGCGCTCTGCCGCGAGCGGTGTAGTTACCTCGACGAGGCGATTCACCAGCGCTACGCTCTCGCCGAGGCCCACATCGGTTATATTCACTCTCTCCGCGGCATCGGCCAGTCTCTCACTCATTTCATCGAACTAGAGGTCGCCAATTCCTCCGGTTCGCCGCCTTCTCCCACTCTCAACCTCCCTCCGGTCCGCAAAGGCGATCACGTCGCCGCCAAATCCTCCTCCCCGCACCACCTCTCCCACTCTAACTCCGGCTCCCACCTCCAATTCCACTCAGATTCCGACGACGACTCCGTCGGCTCGCTCCACCATTCAGACCACTCCTCGCCTCTGCACCTCCACGGCGGCATGGACTACATGGACGGCGGCGGCGGCGGCCAAGACGACATGAACCCCTACCCGCCGCAGGGGTATATGCACATGAACTACATGAGGAACAAAGCGACGCCGTCTGTGGTGTACCAACAGAAACCCCTGAGCCCCGAGAACGCGTACCACATGGGCGAATCCTCCAACTCATCTTACTATCCCTATCCTTACCAAGACGGCGGCGGCGGAGGCGGCGCCAATCCTTATCCCTACTCCGGGTACTCCAATTACGGCGGTGGAAGTAGCGGTGGGTATTATGGCAATTCCACACCCGCGCTCCCTCCTTACGGGGTGTCCTCGCCGCCAGTATCGCAGTCAAAGCCGCCGCCTCCGCCGCCTTCGCCGCCGAAAGCCTCGGCCTGGGACTTCATAAACCCGTTCGAGAGCATCGAGAGGTACTACTCGCCTTACACGCCGAGCCGGGACTCGAGGGAGGTCAGAGAAGAAGAGGGAATTCCCGATTTGGAAGACGAGGAGTACAACAACCACAGCCAGTACCAGCAGGAAGTGGTGAAGGAAGTTCACAGAGAGCACCACAAGGAAGGGAAGCAGCATCATCGTTCTTCGAAAGCCGTGGAGGATAAGGAGGTCGTCGAAGCTCAGGCCTCGCTGTACCAGACGAGGCCGAGCGTCGAGAACGAAAACGGGGTGGAGTATGAGGTCCATGTGGTTGACAAGAAGGTTGTGGATGAGGAGGAGAAGCGAGAGGACCACGGGAGTTCCGGTGGCGGTGGTGGAGCATTCAAGCCGGGTTCTAGAGATGCTTTTGATGTGGCTAGAGAAATTCAGGCTCAGTTTCAGAGAGCTTCCGAGTCGGGGAACGAAATCGCAAGGATGCTGGAGGTGGGAAGGCATCCGTATAATCGAAAACATGTTACTTCCAAGATGATATCGCTAGTGTCGTCGCAGCCTTCTACTTCCAACAGTGTTGATGGGGCAGCATCCTCCGAGGCTGCTCCTGCTCAATTGGGGTTTGATGAAGAACTGATGATGAGGACTAAAAATCTGTCTTCTACGTTGCACAAGCTCCATCTTTGGGAGAAGAAACTGTACAATGAAGTCAAGGCCGAGGAAAAGATGCGGGTGGTCCATGACAGGAAGTGTCGTAAGCTGAAGCGTTTAGATGAAAGGGGAGCAGAGGCTCAGAAAGTAGATACAACTCGAACTTTGATAAGGAGCTTGTCCACAAAAATAAAAATTGCGATTCAAGTTGTCGACAAGATATCTGTGACCATAAATAAGATCAGGGATGAAGAATTATGGCCACAATTAAACGAATTAATTCAAGGGTTAACCAGGATGTGGAAATCTATGCTTGAATGCCATCATAATCAGTGCCTAGCAATCAGAGAAGCCAGGGGTTTAGGTCCTATTGGATCTGGAAAGAAGCTAAGTGATGCTCATGTTGATGCTACATTGCAATTTGAGCGTGAGCTTGTTAACTGGACTTTCAGATTCTCTACTTGGATTAGCGCTCAAAAGGGTTATGTGAGAGCTTTGAATAATTGGCTTTTAAAGTGTCTTCTTTATGAACCTGAAGAAACAGCAGATGGAATAGTTCCCTTCTCACCTGGTCGAATAGGTGCGCCTCCTATTTTTGTAATTTGTAACCAGTGGTCACAAGCTTTGGACAGGATATCAGAAAGAGAGGTGGTTGATTCTATGCGTGTTTTCACCATGAGTGTGCTTCAGAGTTGGGAACAAGGTAAGCTTGAAATGCGGCAGAGAATGACGGAAAATCAAGATCTGCAAAAGAAATTTAAGAACTTGGATAAAAAGGACCAAAAGCTTCAGAAGGAGATTCAAGCATTAGACAAGAAAGTGGTGCTAGTCTCGGGGGATGTTGACTCAGTTACTGGTGGACAGATTGTATATCAAAGTGAGACTAGAAATAGTACTTTACAGGCTAGTCTGCAAAGAATTTTTGAGGCCATGGAAAGGTTTATGGAAGTCTCCACAAAAGCTTACGAGGATCTTTTGCAACGCAGTGAAGAAGAAAGGCTTGCAGGGGAGCAGAAGAGAGTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

813

Amino Acids

91.15

Weight (kDa)

6.1

Isoelectric Point (pI)

50.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 58	3.4e-25	Protein of unknown function (DUF630)
DUF632	PF04782	394 - 699	5.8e-111	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35240 AT4G35240 AT4G35240 AT4G35240
fragaria_vesca	FvH4_2g16330
malus_domestica	MD05G1131700.v1.1 MD10G1134700.v1.1
prunus_persica	Prupe.8G176200_v2.0.a1
pyrus_communis	pycom05g12840 pycom10g11620
rosa_chinensis	RchiOBHm_Chr6g0280091
rosa_laevigata	RLG00000013091
rosa_multiflora	Rmu_sc0007137.1_g000002
rosa_roxburghii	Rroxscaffold_7G00188410
rosa_rugosa	Rorug06G0129900
rosa_samantha	Rh6AG240100 Rh6BG244000 Rh6CG245600 Rh6DG236500
rosa_wichuraiana	Rw6G020930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	335
Acc36I	ACCTGC	1 cut(s)	39
AccB1I	GGYRCC	1 cut(s)	605
AccB7I	CCANNNNNTGG	1 cut(s)	1713
AccBSI	CCGCTC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	1626
AccII	CGCG	5 cut(s)	11, 54, 138, 533, 686
AclWI	GGATC	2 cut(s)	1795, 2391
AcoI	YGGCCR	3 cut(s)	145, 418, 1673
AcsI	RAATTY	4 cut(s)	864, 1194, 2168, 2331
AcuI	CTGAAG	4 cut(s)	1544, 1968, 2084, 2186
AcyI	GRCGYC	2 cut(s)	488, 606
AfaI	GTAC	9 cut(s)	503, 536, 632, 809, 890, 908, 1025, 1463, 2308
AfeI	AGCGCT	2 cut(s)	92, 1885
AflIII	ACRYGT	2 cut(s)	531, 1282
AgsI	TTSAA	7 cut(s)	1156, 1619, 1697, 1730, 1912, 2126, 2216
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	4 cut(s)	770, 1706, 1766, 1981
Alw21I	GWGCWC	2 cut(s)	17, 945
Alw26I	GTCTC	4 cut(s)	156, 2248, 2288, 2368
AlwI	GGATC	2 cut(s)	1795, 2391
AlwNI	CAGNNNCTG	1 cut(s)	2267
Ama87I	CYCGRG	3 cut(s)	524, 838, 2245
Aor51HI	AGCGCT	2 cut(s)	92, 1885
AoxI	GGCC	9 cut(s)	108, 145, 418, 768, 1014, 1034, 1476, 1673, 2340
ApeKI	GCWGC	5 cut(s)	6, 961, 1318, 1349, 1364
ApoI	RAATTY	4 cut(s)	864, 1194, 2168, 2331
ArsI	GACNNNNNNTTYG	2 cut(s)	162, 194
AseI	ATTAAT	1 cut(s)	1691
Asp700I	GAANNNNTTC	1 cut(s)	1692
AspLEI	GCGC	7 cut(s)	11, 46, 93, 608, 688, 1886, 1999
AspS9I	GGNCC	7 cut(s)	109, 229, 1072, 1120, 1498, 1778, 2191
AsuC2I	CCSGG	3 cut(s)	628, 833, 1161
AsuHPI	GGTGA	4 cut(s)	77, 934, 1971, 2077
AsuII	TTCGAA	1 cut(s)	977
AvaI	CYCGRG	3 cut(s)	524, 838, 2245
AvaII	GGWCC	6 cut(s)	229, 1072, 1120, 1498, 1778, 2191
BalI	TGGCCA	1 cut(s)	1675
BanI	GGYRCC	1 cut(s)	605
BanII	GRGCYC	2 cut(s)	17, 524
BarI	GAAGNNNNNNTAC	2 cut(s)	1445, 1477
BbsI	GAAGAC	3 cut(s)	885, 1413, 1925
Bbv12I	GWGCWC	2 cut(s)	17, 945
BbvI	GCAGC	4 cut(s)	973, 1330, 1351, 1361
BccI	CCATC	4 cut(s)	1337, 1449, 1743, 1955
BceAI	ACGGC	6 cut(s)	400, 421, 475, 604, 658, 968
BcgI	CGANNNNNNTGC	2 cut(s)	950, 984
BciT130I	CCWGG	4 cut(s)	772, 1708, 1768, 1983
BcnI	CCSGG	3 cut(s)	628, 833, 1161
BcoDI	GTCTC	4 cut(s)	156, 2248, 2288, 2368
BfaI	CTAG	8 cut(s)	173, 1167, 1188, 1307, 1751, 2240, 2298, 2319
BfoI	RGCGCY	4 cut(s)	47, 94, 609, 1887
BfuAI	ACCTGC	1 cut(s)	39
BglII	AGATCT	1 cut(s)	2155
BmcAI	AGTACT	1 cut(s)	2308
Bme1390I	CCNGG	7 cut(s)	628, 772, 833, 1161, 1708, 1768, 1983
Bme18I	GGWCC	6 cut(s)	229, 1072, 1120, 1498, 1778, 2191
BmeT110I	CYCGRG	3 cut(s)	524, 838, 2245
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	7 cut(s)	109, 229, 1072, 1120, 1498, 1778, 2191
BmiI	GGNNCC	2 cut(s)	298, 607
BmrFI	CCNGG	7 cut(s)	628, 772, 833, 1161, 1708, 1768, 1983
BpiI	GAAGAC	3 cut(s)	885, 1413, 1925
BpmI	CTGGAG	1 cut(s)	1271
Bpu10I	CCTNAGC	2 cut(s)	518, 1011
Bpu14I	TTCGAA	1 cut(s)	977
BpuMI	CCSGG	3 cut(s)	628, 833, 1161
BsaHI	GRCGYC	2 cut(s)	488, 606
BsaWI	WCCGGW	3 cut(s)	191, 226, 1133
Bse118I	RCCGGY	1 cut(s)	34
Bse1I	ACTGG	6 cut(s)	148, 716, 904, 1859, 2023, 2272
Bse3DI	GCAATG	1 cut(s)	1826
BseBI	CCWGG	4 cut(s)	772, 1708, 1768, 1983
BseGI	GGATG	7 cut(s)	1105, 1251, 1264, 1352, 1666, 1716, 2257
BseMI	GCAATG	1 cut(s)	1826
BseMII	CTCAG	6 cut(s)	330, 509, 1025, 1217, 1568, 2274
BseNI	ACTGG	6 cut(s)	148, 716, 904, 1859, 2023, 2272
BseRI	GAGGAG	5 cut(s)	253, 355, 899, 1118, 1121
BseXI	GCAGC	4 cut(s)	973, 1330, 1351, 1361
BsgI	GTGCAG	1 cut(s)	359
Bsh1236I	CGCG	5 cut(s)	11, 54, 138, 533, 686
BshFI	GGCC	9 cut(s)	110, 147, 420, 770, 1016, 1036, 1478, 1675, 2342
BshNI	GGYRCC	1 cut(s)	605
BsiHKAI	GWGCWC	2 cut(s)	17, 945
BsiHKCI	CYCGRG	3 cut(s)	524, 838, 2245
BsiSI	CCGG	8 cut(s)	35, 192, 227, 294, 627, 832, 1134, 1160
BslFI	GGGAC	2 cut(s)	788, 848
BsmAI	GTCTC	4 cut(s)	156, 2248, 2288, 2368
BsmFI	GGGAC	2 cut(s)	788, 848
BsmI	GAATGC	2 cut(s)	1151, 1736
BsnI	GGCC	9 cut(s)	110, 147, 420, 770, 1016, 1036, 1478, 1675, 2342
BsoBI	CYCGRG	3 cut(s)	524, 838, 2245
Bsp119I	TTCGAA	1 cut(s)	977
Bsp1286I	GDGCHC	3 cut(s)	17, 524, 945
Bsp1407I	TGTACA	1 cut(s)	1461
Bsp143I	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
Bsp19I	CCATGG	1 cut(s)	2343
BspANI	GGCC	9 cut(s)	110, 147, 420, 770, 1016, 1036, 1478, 1675, 2342
BspCNI	CTCAG	6 cut(s)	329, 510, 1024, 1216, 1567, 2273
BspFNI	CGCG	5 cut(s)	11, 54, 138, 533, 686
BspLI	GGNNCC	2 cut(s)	298, 607
BspMI	ACCTGC	1 cut(s)	39
BspPI	GGATC	2 cut(s)	1795, 2391
BspT104I	TTCGAA	1 cut(s)	977
BspT107I	GGYRCC	1 cut(s)	605
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	1 cut(s)	1826
BsrFI	RCCGGY	1 cut(s)	34
BsrGI	TGTACA	1 cut(s)	1461
BsrI	ACTGG	6 cut(s)	148, 716, 904, 1859, 2023, 2272
BssAI	RCCGGY	1 cut(s)	34
BssMI	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
BssNI	GRCGYC	2 cut(s)	488, 606
BssT1I	CCWWGG	1 cut(s)	2343
Bst2UI	CCWGG	4 cut(s)	772, 1708, 1768, 1983
Bst4CI	ACNGT	2 cut(s)	1337, 1461
Bst6I	CTCTTC	2 cut(s)	852, 2423
BstACI	GRCGYC	2 cut(s)	488, 606
BstAUI	TGTACA	1 cut(s)	1461
BstBI	TTCGAA	1 cut(s)	977
BstC8I	GCNNGC	5 cut(s)	13, 36, 56, 344, 2415
BstDEI	CTNAG	7 cut(s)	316, 518, 1011, 1203, 1554, 1802, 2260
BstDSI	CCRYGG	5 cut(s)	136, 382, 984, 1123, 2343
BstENI	CCTNNNNNAGG	1 cut(s)	74
BstF5I	GGATG	7 cut(s)	1105, 1251, 1264, 1352, 1666, 1716, 2257
BstFNI	CGCG	5 cut(s)	11, 54, 138, 533, 686
BstH2I	RGCGCY	4 cut(s)	47, 94, 609, 1887
BstHHI	GCGC	7 cut(s)	11, 46, 93, 608, 688, 1886, 1999
BstKTI	GATC	5 cut(s)	244, 1656, 1790, 2158, 2386
BstMAI	GTCTC	4 cut(s)	156, 2248, 2288, 2368
BstMBI	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
BstNI	CCWGG	4 cut(s)	772, 1708, 1768, 1983
BstNSI	RCATGY	1 cut(s)	1286
BstSCI	CCNGG	7 cut(s)	626, 770, 831, 1159, 1706, 1766, 1981
BstUI	CGCG	5 cut(s)	11, 54, 138, 533, 686
BstV1I	GCAGC	4 cut(s)	973, 1330, 1351, 1361
BstV2I	GAAGAC	3 cut(s)	885, 1413, 1925
BstX2I	RGATCY	3 cut(s)	1787, 2155, 2383
BstYI	RGATCY	3 cut(s)	1787, 2155, 2383
BsuRI	GGCC	9 cut(s)	110, 147, 420, 770, 1016, 1036, 1478, 1675, 2342
BtgI	CCRYGG	5 cut(s)	136, 382, 984, 1123, 2343
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	7 cut(s)	1105, 1251, 1264, 1352, 1666, 1716, 2257
BtsI	GCAGTG	1 cut(s)	2404
BtsIMutI	CAGTG	4 cut(s)	1342, 1751, 2030, 2404
BveI	ACCTGC	1 cut(s)	39
Cac8I	GCNNGC	5 cut(s)	13, 36, 56, 344, 2415
CaiI	CAGNNNCTG	1 cut(s)	2267
CfoI	GCGC	7 cut(s)	11, 46, 93, 608, 688, 1886, 1999
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	7 cut(s)	109, 229, 1072, 1120, 1498, 1778, 2191
Cfr42I	CCGCGG	1 cut(s)	139
CpoI	CGGWCCG	1 cut(s)	229
CseI	GACGC	2 cut(s)	496, 1030
CsiI	ACCWGGT	1 cut(s)	1981
Csp6I	GTAC	9 cut(s)	502, 535, 631, 808, 889, 907, 1024, 1462, 2307
CspI	CGGWCCG	1 cut(s)	229
CviQI	GTAC	9 cut(s)	502, 535, 631, 808, 889, 907, 1024, 1462, 2307
DdeI	CTNAG	7 cut(s)	316, 518, 1011, 1203, 1554, 1802, 2260
DinI	GGCGCC	1 cut(s)	607
DpnI	GATC	5 cut(s)	243, 1655, 1789, 2157, 2385
DpnII	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
DraI	TTTAAA	1 cut(s)	1926
DrdI	GACNNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	3 cut(s)	145, 418, 1673
Eam1104I	CTCTTC	2 cut(s)	852, 2423
EarI	CTCTTC	2 cut(s)	852, 2423
EciI	GGCGGA	2 cut(s)	612, 732
Ecl136II	GAGCTC	1 cut(s)	15
Eco130I	CCWWGG	1 cut(s)	2343
Eco147I	AGGCCT	1 cut(s)	1016
Eco24I	GRGCYC	2 cut(s)	17, 524
Eco32I	GATATC	3 cut(s)	1302, 1635, 2049
Eco47I	GGWCC	6 cut(s)	229, 1072, 1120, 1498, 1778, 2191
Eco47III	AGCGCT	2 cut(s)	92, 1885
Eco53kI	GAGCTC	1 cut(s)	15
Eco57I	CTGAAG	4 cut(s)	1544, 1968, 2084, 2186
Eco88I	CYCGRG	3 cut(s)	524, 838, 2245
EcoICRI	GAGCTC	1 cut(s)	15
EcoNI	CCTNNNNNAGG	1 cut(s)	74
EcoO109I	RGGNCCY	1 cut(s)	1778
EcoRI	GAATTC	1 cut(s)	864
EcoRII	CCWGG	4 cut(s)	770, 1706, 1766, 1981
EcoRV	GATATC	3 cut(s)	1302, 1635, 2049
EcoT14I	CCWWGG	1 cut(s)	2343
EcoT38I	GRGCYC	2 cut(s)	17, 524
EgeI	GGCGCC	1 cut(s)	607
EheI	GGCGCC	1 cut(s)	607
ErhI	CCWWGG	1 cut(s)	2343
FalI	AAGNNNNNCTT	4 cut(s)	2106, 2138, 2397, 2429
FaqI	GGGAC	2 cut(s)	788, 848
FauI	CCCGC	4 cut(s)	276, 450, 691, 1485
FblI	GTMKAC	1 cut(s)	1626
FokI	GGATG	7 cut(s)	1112, 1251, 1258, 1339, 1673, 1723, 2264
FriOI	GRGCYC	2 cut(s)	17, 524
FspBI	CTAG	8 cut(s)	173, 1167, 1188, 1307, 1751, 2240, 2298, 2319
GlaI	GCGC	7 cut(s)	10, 45, 92, 607, 687, 1885, 1998
GsuI	CTGGAG	1 cut(s)	1271
HaeII	RGCGCY	4 cut(s)	47, 94, 609, 1887
HaeIII	GGCC	9 cut(s)	110, 147, 420, 770, 1016, 1036, 1478, 1675, 2342
HapII	CCGG	8 cut(s)	35, 192, 227, 294, 627, 832, 1134, 1160
HgaI	GACGC	2 cut(s)	496, 1030
HhaI	GCGC	7 cut(s)	11, 46, 93, 608, 688, 1886, 1999
Hin1I	GRCGYC	2 cut(s)	488, 606
Hin6I	GCGC	7 cut(s)	9, 44, 91, 606, 686, 1884, 1997
HinP1I	GCGC	7 cut(s)	9, 44, 91, 606, 686, 1884, 1997
HincII	GTYRAC	5 cut(s)	1084, 1627, 1704, 1852, 2257
HindII	GTYRAC	5 cut(s)	1084, 1627, 1704, 1852, 2257
HindIII	AAGCTT	4 cut(s)	2034, 2120, 2198, 2373
HpaI	GTTAAC	2 cut(s)	1704, 1852
HpaII	CCGG	8 cut(s)	35, 192, 227, 294, 627, 832, 1134, 1160
HphI	GGTGA	4 cut(s)	77, 934, 1971, 2077
Hpy166II	GTNNAC	9 cut(s)	502, 934, 1084, 1596, 1627, 1704, 1852, 2257, 2273
Hpy188III	TCNNGA	7 cut(s)	793, 802, 869, 1045, 1167, 1791, 2153
Hpy8I	GTNNAC	9 cut(s)	502, 934, 1084, 1596, 1627, 1704, 1852, 2257, 2273
HpyAV	CCTTC	9 cut(s)	213, 759, 919, 947, 1084, 1254, 1332, 1984, 2200
HpyCH4III	ACNGT	2 cut(s)	1337, 1461
HpyCH4IV	ACGT	2 cut(s)	246, 1427
HpyCH4V	TGCA	8 cut(s)	376, 460, 1432, 1831, 2161, 2326, 2392, 2417
HpyF3I	CTNAG	7 cut(s)	316, 518, 1011, 1203, 1554, 1802, 2260
HpySE526I	ACGT	2 cut(s)	246, 1427
Hsp92I	GRCGYC	2 cut(s)	488, 606
HspAI	GCGC	7 cut(s)	9, 44, 91, 606, 686, 1884, 1997
KasI	GGCGCC	1 cut(s)	605
KroI	GCCGGC	1 cut(s)	34
KroNI	GCCGGC	1 cut(s)	36
KspAI	GTTAAC	2 cut(s)	1704, 1852
KspI	CCGCGG	1 cut(s)	139
Kzo9I	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
Lsp1109I	GCAGC	4 cut(s)	973, 1330, 1351, 1361
MabI	ACCWGGT	1 cut(s)	1981
MaeI	CTAG	8 cut(s)	173, 1167, 1188, 1307, 1751, 2240, 2298, 2319
MaeII	ACGT	2 cut(s)	246, 1427
MaeIII	GTNAC	6 cut(s)	65, 1285, 1639, 2018, 2028, 2263
MalI	GATC	5 cut(s)	243, 1655, 1789, 2157, 2385
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
MfeI	CAATTG	1 cut(s)	1376
MflI	RGATCY	3 cut(s)	1787, 2155, 2383
MhlI	GDGCHC	3 cut(s)	17, 524, 945
MlsI	TGGCCA	1 cut(s)	1675
MluI	ACGCGT	1 cut(s)	531
MluNI	TGGCCA	1 cut(s)	1675
Mly113I	GGCGCC	1 cut(s)	606
MlyI	GAGTC	4 cut(s)	326, 830, 1232, 2252
MmeI	TCCRAC	3 cut(s)	348, 579, 1356
Mox20I	TGGCCA	1 cut(s)	1675
MroNI	GCCGGC	1 cut(s)	34
MroXI	GAANNNNTTC	1 cut(s)	1692
MscI	TGGCCA	1 cut(s)	1675
MseI	TTAA	6 cut(s)	1682, 1691, 1703, 1851, 1925, 2172
MslI	CAYNNNNRTG	2 cut(s)	1818, 2093
Msp20I	TGGCCA	1 cut(s)	1675
MspA1I	CMGCKG	1 cut(s)	138
MspI	CCGG	8 cut(s)	35, 192, 227, 294, 627, 832, 1134, 1160
MspR9I	CCNGG	7 cut(s)	628, 772, 833, 1161, 1708, 1768, 1983
MunI	CAATTG	1 cut(s)	1376
Mva1269I	GAATGC	2 cut(s)	1151, 1736
MvaI	CCWGG	4 cut(s)	772, 1708, 1768, 1983
MvnI	CGCG	5 cut(s)	11, 54, 138, 533, 686
NaeI	GCCGGC	1 cut(s)	36
NarI	GGCGCC	1 cut(s)	606
NciI	CCSGG	3 cut(s)	628, 833, 1161
NcoI	CCATGG	1 cut(s)	2343
NdeII	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
NgoMIV	GCCGGC	1 cut(s)	34
NlaIV	GGNNCC	2 cut(s)	298, 607
NmeAIII	GCCGAG	5 cut(s)	130, 746, 852, 1062, 1504
NmuCI	GTSAC	2 cut(s)	1639, 2028
NspI	RCATGY	1 cut(s)	1286
NspV	TTCGAA	1 cut(s)	977
PaeR7I	CTCGAG	1 cut(s)	838
PceI	AGGCCT	1 cut(s)	1016
PciI	ACATGT	1 cut(s)	1282
PcsI	WCGNNNNNNNCGW	4 cut(s)	102, 333, 798, 1310
PctI	GAATGC	2 cut(s)	1151, 1736
PdiI	GCCGGC	1 cut(s)	36
PdmI	GAANNNNTTC	1 cut(s)	1692
PfeI	GAWTC	7 cut(s)	82, 320, 548, 1615, 1866, 2069, 2212
PflFI	GACNNNGTC	2 cut(s)	335, 490
PflMI	CCANNNNNTGG	1 cut(s)	1713
PleI	GAGTC	4 cut(s)	326, 830, 1231, 2252
PluTI	GGCGCC	1 cut(s)	609
PpsI	GAGTC	4 cut(s)	326, 830, 1231, 2252
PpuMI	RGGWCCY	1 cut(s)	1778
PscI	ACATGT	1 cut(s)	1282
PshBI	ATTAAT	1 cut(s)	1691
Psp124BI	GAGCTC	1 cut(s)	17
Psp5II	RGGWCCY	1 cut(s)	1778
Psp6I	CCWGG	4 cut(s)	770, 1706, 1766, 1981
PspGI	CCWGG	4 cut(s)	770, 1706, 1766, 1981
PspN4I	GGNNCC	2 cut(s)	298, 607
PspPI	GGNCC	7 cut(s)	109, 229, 1072, 1120, 1498, 1778, 2191
PspPPI	RGGWCCY	1 cut(s)	1778
PspXI	VCTCGAGB	1 cut(s)	838
PstNI	CAGNNNCTG	1 cut(s)	2267
PsuI	RGATCY	3 cut(s)	1787, 2155, 2383
PsyI	GACNNNGTC	2 cut(s)	335, 490
RsaI	GTAC	9 cut(s)	503, 536, 632, 809, 890, 908, 1025, 1463, 2308
RsaNI	GTAC	9 cut(s)	502, 535, 631, 808, 889, 907, 1024, 1462, 2307
RseI	CAYNNNNRTG	2 cut(s)	1818, 2093
Rsr2I	CGGWCCG	1 cut(s)	229
RsrII	CGGWCCG	1 cut(s)	229
SacI	GAGCTC	1 cut(s)	17
SacII	CCGCGG	1 cut(s)	139
SalI	GTCGAC	1 cut(s)	1625
SaqAI	TTAA	6 cut(s)	1682, 1691, 1703, 1851, 1925, 2172
Sau3AI	GATC	5 cut(s)	241, 1653, 1787, 2155, 2383
Sau96I	GGNCC	7 cut(s)	109, 229, 1072, 1120, 1498, 1778, 2191
ScaI	AGTACT	1 cut(s)	2308
SchI	GAGTC	4 cut(s)	326, 830, 1232, 2252
ScrFI	CCNGG	7 cut(s)	628, 772, 833, 1161, 1708, 1768, 1983
SduI	GDGCHC	3 cut(s)	17, 524, 945
SexAI	ACCWGGT	1 cut(s)	1981
SfoI	GGCGCC	1 cut(s)	607
Sfr274I	CTCGAG	1 cut(s)	838
Sfr303I	CCGCGG	1 cut(s)	139
SfuI	TTCGAA	1 cut(s)	977
SgrBI	CCGCGG	1 cut(s)	139
SinI	GGWCC	6 cut(s)	229, 1072, 1120, 1498, 1778, 2191
SlaI	CTCGAG	1 cut(s)	838
SmiMI	CAYNNNNRTG	2 cut(s)	1818, 2093
SmlI	CTYRAG	1 cut(s)	838
SmoI	CTYRAG	1 cut(s)	838
SseBI	AGGCCT	1 cut(s)	1016
SspDI	GGCGCC	1 cut(s)	605
SspMI	CTAG	8 cut(s)	173, 1167, 1188, 1307, 1751, 2240, 2298, 2319
SstI	GAGCTC	1 cut(s)	17
StuI	AGGCCT	1 cut(s)	1016
StyD4I	CCNGG	7 cut(s)	626, 770, 831, 1159, 1706, 1766, 1981
StyI	CCWWGG	1 cut(s)	2343
TaaI	ACNGT	2 cut(s)	1337, 1461
TaiI	ACGT	2 cut(s)	249, 1430
TatI	WGTACW	3 cut(s)	888, 1461, 2306
TfiI	GAWTC	7 cut(s)	82, 320, 548, 1615, 1866, 2069, 2212
Tru1I	TTAA	6 cut(s)	1682, 1691, 1703, 1851, 1925, 2172
Tru9I	TTAA	6 cut(s)	1682, 1691, 1703, 1851, 1925, 2172
TscAI	CASTG	4 cut(s)	1342, 1751, 2030, 2404
TseFI	GTSAC	2 cut(s)	1639, 2028
TseI	GCWGC	5 cut(s)	6, 961, 1318, 1349, 1364
Tsp45I	GTSAC	2 cut(s)	1639, 2028
TspGWI	ACGGA	3 cut(s)	325, 1257, 2159
TspRI	CASTG	4 cut(s)	1342, 1751, 2030, 2404
Tth111I	GACNNNGTC	2 cut(s)	335, 490
Van91I	CCANNNNNTGG	1 cut(s)	1713
VpaK11BI	GGWCC	6 cut(s)	229, 1072, 1120, 1498, 1778, 2191
VspI	ATTAAT	1 cut(s)	1691
XagI	CCTNNNNNAGG	1 cut(s)	74
XapI	RAATTY	4 cut(s)	864, 1194, 2168, 2331
XbaI	TCTAGA	1 cut(s)	1166
XceI	RCATGY	1 cut(s)	1286
XhoI	CTCGAG	1 cut(s)	838
XmiI	GTMKAC	1 cut(s)	1626
XmnI	GAANNNNTTC	1 cut(s)	1692
XspI	CTAG	8 cut(s)	173, 1167, 1188, 1307, 1751, 2240, 2298, 2319
ZrmI	AGTACT	1 cut(s)	2308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.