Rh6AG240100

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0010996
Physical Location & Seq
Reverse (-)
42599269 .. 42603107
3839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG240100.1

Sequence Viewer

Length: 2457 bp
ATGGGCTGCGCGAGCTCCAAGCTCGACGACCTCCCCGCGGTGGCGCTCTGCCGCGAGCGGTGTAGCTACCTCGACGAGGCGATTCACCAGCGCTACGCTCTCGCCGAGGCCCACGTCGGTTATATTCACTCTCTCCGCGGCATCGGCCAGTCTCTCACTCATTTCATCGAACTAGAGGTCGCCAATTCCTCCGGCTCGCCGCCTTCTCCCACTCTCAACCTCCCTCCGGTCCGCAAAGGCGATCACGTCGCCGCCAAATCCTCCGCCCCGCACCACCTCTCCCACTCTAACTCCGGCTCCCACATCCAATTCGACTCAGATTCCGACGACGACTCCGTCGGCTCGCTCCACCATTCCGACCACTCCTCGCCTCTGCACCTCCACGGCGGCATGGACTACATGGATGGCGGCGGCGGCCAAGACGACATGAACCCCTACCCGCCGCAGGGGTATATGCACATGAACTACATGCGGAACAAAGCGACGCCGTCTGTGGTGTACCAGCAGAAACCCATGAGCCCCGAGAACGTGTACCACATGGGCGAATCCTCCACCTCATCTTACTACCCCTATCCTTACCAAGACGGCGGCGGCGGAGGCGGCGCCAATCCTTATCCCCATTCCGGGTACTCCAATTACGGCGGTGGAAGTAGCGGTGGGTATTATGGTAATTCCACACCCGCGCCTCCTCCTTACGGGGTGTCCTCGCCGCCGGCTCCCCAGTCAAAGCCGCCGCCTCCGCCGCCTTCGCCGCCGAAAGCCTCGGCCTGGGACTTCATAAACCCGTTCGAGAGCATCGAGAGCTACTACAAGGCTTACACGCCGAGCCGGGACTCGAGGGAGGTCAGAGAGGAAGAGGGAATTCCCGACTTGGAAGACGAGGAGTACAACAACCACGGCGGCCACCACAGCCAGTACCAGCAGGAAGTGGTGAAGGAAGTTCACAGAGAGCACCACAAGGAAGGGAAGCAGCATCATCGTTCTTCGAACGCCGTGGAGGATGAGGAGGTCCTCGAAGCTCAGGCCTCGCTGTACCAGACGAGGCCGAGCGTCGAGAAACAAAACGGGGCGGAGTATGAGGTACACGTGGTGGACAAGAAGGTTGTGGATGAGGAGGAGAAGCGTGAGGACCACCGGAGTTCCGGTGGAGGTGGTGGAGCATTCAAGCCGGGTTCGAGGGATGCTTTTGATGTGGCTAGAGAAATTCAGGCTCAGTTTCAGAGAGCTTCCGAGTCGGGTAACGAAATCGCAAGGATGCTGGAGGTGGGAAGGCATCCGTATAATCGGAAACATGTTACTTCCAAGATGATATCGCTAGTGTCGTCGCAGCCTTCTACTTCCAACAGTGTTGATGGGGCATCATCCTCAGAGGCTGGTCCTGCTCAATTGGGGTTTGATGAAGAACTGATGATGAGGACTAAAAATCTGTCTTCCACGTTGCACAAGCTCTATCTTTGGGAGAAGAAACTGTACAATGAAGTCAAGGCCGAGGAAAAGATGCGGGTGGTCCATGACAGGAAGTGTCGTAAGCTGAAGCGTTTAGATGAAAGGGGAGCAGAGGCTCAGAAAGTAGATACAACTCGAACTTTGATAAGGAGCTTGTCCACAAAAATAAAAATTGCGATTCAAGTTGTGGACAAGATATCTATGACCATAAATAAGATCAGGGATGAAGAATTGTGGCCACAATTAAACGAATTAATTCAAGGGTTAACCAGGATGTGGAAATCTATGCTTGAATGCCATCGTAATCAGTGCCTAGCAATCAGAGAAGCCAGGGGTTTAGGTCCTATTGGATCTGGAAAGAAGCTAAGTGATGCTCATGTTGATGCTACATTGCAATTTGAGCATGAGCTTGTTAACTGGACTTTCAGATTCTCTACTTGGATTAGCGCTCAAAAGGGTTGTGTGAGAGCTTTGAATAATTGGCTTTTAAAGTGTCTTCTTTATGAACCTGAAGAAACAGCAGATGGAATAATTCCCTTCTCACCTAGTCGAATAGGTGCGCCTCCTATTTTTGTAATTTGTAACCAGTGGTCACAAGCTTTGGACAGGATATCAGAAAGAGAGGTGGTTGATTCTATGCGTGTTTTCACCATGAGTGTGCTTCAGAGTTGGGAACAAGGTAAGCTTGAAATGCGGCAGAGAATGATGGAAAATCAAGATCTGCAAAAGAAATTTAAGAACTTGGATAAAAAGGACCAAAAACTTCAGAAGGAGATTCAAGCATTAGACAAGAAAGTGGTGCTAGTCTCGCGGGATGTTGACTATCCCTCAGATACTGGTGGACAGATTGTATATCAAAGTGAGACTAGAAATAGTACTTTACAGGCTAGTCTGCAAAGAATTTTTGAGGCCATGGAAAGGTTTACGGAAGTCTCCACAAAAGCTTATGAGGAGCTTTTGCAACGCAGTGAAGAAGTAAGGCTTGCAGGGGAGCATGGGAGAGTTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

818

Amino Acids

91.78

Weight (kDa)

6.09

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 58 2.3e-25 Protein of unknown function (DUF630)
DUF632 PF04782 397 - 702 1.7e-110 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010996)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G35240 AT4G35240 AT4G35240 AT4G35240
fragaria_vesca FvH4_2g16330
malus_domestica MD05G1131700.v1.1 MD10G1134700.v1.1
prunus_persica Prupe.8G176200_v2.0.a1
pyrus_communis pycom05g12840 pycom10g11620
rosa_chinensis RchiOBHm_Chr6g0280091
rosa_laevigata RLG00000013091
rosa_multiflora Rmu_sc0007137.1_g000002
rosa_roxburghii Rroxscaffold_7G00188410
rosa_rugosa Rorug06G0129900
rosa_samantha Rh6AG240100 Rh6BG244000 Rh6CG245600 Rh6DG236500
rosa_wichuraiana Rw6G020930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 335
AccB1I GGYRCC 1 cut(s) 602
AccB7I CCANNNNNTGG 1 cut(s) 1722
AccBSI CCGCTC 1 cut(s) 58
AccII CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
AclWI GGATC 1 cut(s) 1804
AcoI YGGCCR 4 cut(s) 145, 415, 901, 1682
AcsI RAATTY 4 cut(s) 861, 1203, 2177, 2346
AcuI CTGAAG 4 cut(s) 1553, 1977, 2093, 2195
AcvI CACGTG 1 cut(s) 1087
AcyI GRCGYC 2 cut(s) 485, 603
AdeI CACNNNGTG 1 cut(s) 1090
AfaI GTAC 9 cut(s) 500, 533, 629, 887, 917, 1034, 1083, 1472, 2323
AfeI AGCGCT 2 cut(s) 92, 1894
AflIII ACRYGT 3 cut(s) 528, 1084, 1291
AgsI TTSAA 7 cut(s) 1165, 1628, 1706, 1739, 1921, 2135, 2225
AjiI CACGTC 2 cut(s) 115, 247
AjnI CCWGG 3 cut(s) 767, 1715, 1775
Alw21I GWGCWC 2 cut(s) 17, 954
Alw26I GTCTC 4 cut(s) 156, 2257, 2303, 2383
AlwI GGATC 1 cut(s) 1804
AlwNI CAGNNNCTG 2 cut(s) 1373, 2282
Ama87I CYCGRG 2 cut(s) 521, 835
Aor51HI AGCGCT 2 cut(s) 92, 1894
ApeKI GCWGC 3 cut(s) 6, 970, 1327
ApoI RAATTY 4 cut(s) 861, 1203, 2177, 2346
ArsI GACNNNNNNTTYG 2 cut(s) 162, 194
AseI ATTAAT 1 cut(s) 1700
Asp700I GAANNNNTTC 1 cut(s) 1701
AspLEI GCGC 7 cut(s) 11, 46, 93, 605, 685, 1895, 2008
AspS9I GGNCC 8 cut(s) 109, 229, 1009, 1129, 1376, 1507, 1787, 2200
AsuC2I CCSGG 3 cut(s) 625, 830, 1170
AsuHPI GGTGA 4 cut(s) 77, 943, 1980, 2086
AsuII TTCGAA 1 cut(s) 986
AvaI CYCGRG 2 cut(s) 521, 835
AvaII GGWCC 7 cut(s) 229, 1009, 1129, 1376, 1507, 1787, 2200
BalI TGGCCA 1 cut(s) 1684
BanI GGYRCC 1 cut(s) 602
BanII GRGCYC 2 cut(s) 17, 521
BarI GAAGNNNNNNTAC 2 cut(s) 1454, 1486
BbrPI CACGTG 1 cut(s) 1087
BbsI GAAGAC 3 cut(s) 882, 1422, 1934
Bbv12I GWGCWC 2 cut(s) 17, 954
BbvI GCAGC 2 cut(s) 982, 1339
BccI CCATC 5 cut(s) 398, 1346, 1752, 1964, 2146
BceAI ACGGC 6 cut(s) 400, 472, 601, 655, 913, 977
BcgI CGANNNNNNTGC 2 cut(s) 959, 993
BciT130I CCWGG 3 cut(s) 769, 1717, 1777
BcnI CCSGG 3 cut(s) 625, 830, 1170
BcoDI GTCTC 4 cut(s) 156, 2257, 2303, 2383
BfaI CTAG 8 cut(s) 173, 1197, 1316, 1760, 1992, 2249, 2313, 2334
BfoI RGCGCY 4 cut(s) 47, 94, 606, 1896
BglII AGATCT 1 cut(s) 2164
BmcAI AGTACT 1 cut(s) 2323
Bme1390I CCNGG 6 cut(s) 625, 769, 830, 1170, 1717, 1777
Bme18I GGWCC 7 cut(s) 229, 1009, 1129, 1376, 1507, 1787, 2200
BmeT110I CYCGRG 2 cut(s) 521, 835
BmgBI CACGTC 2 cut(s) 115, 247
BmgT120I GGNCC 8 cut(s) 109, 229, 1009, 1129, 1376, 1507, 1787, 2200
BmiI GGNNCC 3 cut(s) 298, 604, 717
BmrFI CCNGG 6 cut(s) 625, 769, 830, 1170, 1717, 1777
BmrI ACTGGG 1 cut(s) 715
BmuI ACTGGG 1 cut(s) 715
BpiI GAAGAC 3 cut(s) 882, 1422, 1934
BpmI CTGGAG 1 cut(s) 1280
Bpu10I CCTNAGC 1 cut(s) 1020
Bpu14I TTCGAA 1 cut(s) 986
BpuMI CCSGG 3 cut(s) 625, 830, 1170
BsaAI YACGTR 1 cut(s) 1087
BsaHI GRCGYC 2 cut(s) 485, 603
BsaWI WCCGGW 3 cut(s) 226, 1134, 1142
Bse118I RCCGGY 1 cut(s) 712
Bse1I ACTGG 6 cut(s) 148, 721, 913, 1868, 2032, 2287
Bse3DI GCAATG 1 cut(s) 1835
BseBI CCWGG 3 cut(s) 769, 1717, 1777
BseMI GCAATG 1 cut(s) 1835
BseMII CTCAG 6 cut(s) 330, 1034, 1226, 1380, 1577, 2289
BseNI ACTGG 6 cut(s) 148, 721, 913, 1868, 2032, 2287
BseRI GAGGAG 7 cut(s) 355, 678, 896, 1019, 1127, 1130, 2411
BseXI GCAGC 2 cut(s) 982, 1339
BsgI GTGCAG 1 cut(s) 359
Bsh1236I CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
BshNI GGYRCC 1 cut(s) 602
BsiHKAI GWGCWC 2 cut(s) 17, 954
BsiHKCI CYCGRG 2 cut(s) 521, 835
BsiSI CCGG 9 cut(s) 192, 227, 294, 624, 713, 829, 1135, 1143, 1169
BslFI GGGAC 2 cut(s) 785, 845
BsmAI GTCTC 4 cut(s) 156, 2257, 2303, 2383
BsmFI GGGAC 2 cut(s) 785, 845
BsmI GAATGC 2 cut(s) 1160, 1745
BsoBI CYCGRG 2 cut(s) 521, 835
Bsp119I TTCGAA 1 cut(s) 986
Bsp1286I GDGCHC 3 cut(s) 17, 521, 954
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 4 cut(s) 241, 1662, 1796, 2164
Bsp19I CCATGG 1 cut(s) 2358
BspCNI CTCAG 6 cut(s) 329, 1033, 1225, 1379, 1576, 2288
BspFNI CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
BspLI GGNNCC 3 cut(s) 298, 604, 717
BspPI GGATC 1 cut(s) 1804
BspT104I TTCGAA 1 cut(s) 986
BspT107I GGYRCC 1 cut(s) 602
BsrBI CCGCTC 1 cut(s) 58
BsrDI GCAATG 1 cut(s) 1835
BsrFI RCCGGY 1 cut(s) 712
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 6 cut(s) 148, 721, 913, 1868, 2032, 2287
BssAI RCCGGY 1 cut(s) 712
BssMI GATC 4 cut(s) 241, 1662, 1796, 2164
BssNI GRCGYC 2 cut(s) 485, 603
BssT1I CCWWGG 1 cut(s) 2358
Bst2UI CCWGG 3 cut(s) 769, 1717, 1777
Bst4CI ACNGT 2 cut(s) 1346, 1470
Bst6I CTCTTC 1 cut(s) 849
BstACI GRCGYC 2 cut(s) 485, 603
BstAUI TGTACA 1 cut(s) 1470
BstBAI YACGTR 1 cut(s) 1087
BstBI TTCGAA 1 cut(s) 986
BstC8I GCNNGC 6 cut(s) 13, 56, 197, 344, 714, 2430
BstDEI CTNAG 7 cut(s) 316, 1020, 1212, 1366, 1563, 1811, 2275
BstDSI CCRYGG 6 cut(s) 36, 136, 382, 895, 993, 2358
BstENI CCTNNNNNAGG 1 cut(s) 74
BstFNI CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
BstH2I RGCGCY 4 cut(s) 47, 94, 606, 1896
BstHHI GCGC 7 cut(s) 11, 46, 93, 605, 685, 1895, 2008
BstKTI GATC 4 cut(s) 244, 1665, 1799, 2167
BstMAI GTCTC 4 cut(s) 156, 2257, 2303, 2383
BstMBI GATC 4 cut(s) 241, 1662, 1796, 2164
BstNI CCWGG 3 cut(s) 769, 1717, 1777
BstNSI RCATGY 2 cut(s) 472, 1295
BstSCI CCNGG 6 cut(s) 623, 767, 828, 1168, 1715, 1775
BstUI CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
BstV1I GCAGC 2 cut(s) 982, 1339
BstV2I GAAGAC 3 cut(s) 882, 1422, 1934
BstX2I RGATCY 2 cut(s) 1796, 2164
BstYI RGATCY 2 cut(s) 1796, 2164
BtgI CCRYGG 6 cut(s) 36, 136, 382, 895, 993, 2358
BtrI CACGTC 2 cut(s) 115, 247
BtsI GCAGTG 1 cut(s) 2419
BtsIMutI CAGTG 4 cut(s) 1351, 1760, 2039, 2419
Cac8I GCNNGC 6 cut(s) 13, 56, 197, 344, 714, 2430
CaiI CAGNNNCTG 2 cut(s) 1373, 2282
CfoI GCGC 7 cut(s) 11, 46, 93, 605, 685, 1895, 2008
Cfr10I RCCGGY 1 cut(s) 712
Cfr13I GGNCC 8 cut(s) 109, 229, 1009, 1129, 1376, 1507, 1787, 2200
Cfr42I CCGCGG 2 cut(s) 39, 139
CpoI CGGWCCG 1 cut(s) 229
CseI GACGC 2 cut(s) 493, 1039
Csp6I GTAC 9 cut(s) 499, 532, 628, 886, 916, 1033, 1082, 1471, 2322
CspI CGGWCCG 1 cut(s) 229
CviQI GTAC 9 cut(s) 499, 532, 628, 886, 916, 1033, 1082, 1471, 2322
DdeI CTNAG 7 cut(s) 316, 1020, 1212, 1366, 1563, 1811, 2275
DinI GGCGCC 1 cut(s) 604
DpnI GATC 4 cut(s) 243, 1664, 1798, 2166
DpnII GATC 4 cut(s) 241, 1662, 1796, 2164
DraI TTTAAA 1 cut(s) 1935
DraIII CACNNNGTG 1 cut(s) 1090
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 4 cut(s) 145, 415, 901, 1682
Eam1104I CTCTTC 1 cut(s) 849
EarI CTCTTC 1 cut(s) 849
EciI GGCGGA 4 cut(s) 253, 609, 729, 1085
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 2358
Eco147I AGGCCT 1 cut(s) 1025
Eco24I GRGCYC 2 cut(s) 17, 521
Eco32I GATATC 3 cut(s) 1311, 1644, 2058
Eco47I GGWCC 7 cut(s) 229, 1009, 1129, 1376, 1507, 1787, 2200
Eco47III AGCGCT 2 cut(s) 92, 1894
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 4 cut(s) 1553, 1977, 2093, 2195
Eco72I CACGTG 1 cut(s) 1087
Eco88I CYCGRG 2 cut(s) 521, 835
EcoICRI GAGCTC 1 cut(s) 15
EcoNI CCTNNNNNAGG 1 cut(s) 74
EcoO109I RGGNCCY 2 cut(s) 1009, 1787
EcoRI GAATTC 1 cut(s) 861
EcoRII CCWGG 3 cut(s) 767, 1715, 1775
EcoRV GATATC 3 cut(s) 1311, 1644, 2058
EcoT14I CCWWGG 1 cut(s) 2358
EcoT38I GRGCYC 2 cut(s) 17, 521
EgeI GGCGCC 1 cut(s) 604
EheI GGCGCC 1 cut(s) 604
ErhI CCWWGG 1 cut(s) 2358
FalI AAGNNNNNCTT 4 cut(s) 2115, 2147, 2412, 2444
FaqI GGGAC 2 cut(s) 785, 845
FauI CCCGC 6 cut(s) 43, 276, 447, 688, 1494, 2250
FriOI GRGCYC 2 cut(s) 17, 521
FspBI CTAG 8 cut(s) 173, 1197, 1316, 1760, 1992, 2249, 2313, 2334
GlaI GCGC 7 cut(s) 10, 45, 92, 604, 684, 1894, 2007
GsuI CTGGAG 1 cut(s) 1280
HaeII RGCGCY 4 cut(s) 47, 94, 606, 1896
HapII CCGG 9 cut(s) 192, 227, 294, 624, 713, 829, 1135, 1143, 1169
HgaI GACGC 2 cut(s) 493, 1039
HhaI GCGC 7 cut(s) 11, 46, 93, 605, 685, 1895, 2008
Hin1I GRCGYC 2 cut(s) 485, 603
Hin6I GCGC 7 cut(s) 9, 44, 91, 603, 683, 1893, 2006
HinP1I GCGC 7 cut(s) 9, 44, 91, 603, 683, 1893, 2006
HincII GTYRAC 3 cut(s) 1713, 1861, 2266
HindII GTYRAC 3 cut(s) 1713, 1861, 2266
HindIII AAGCTT 3 cut(s) 2043, 2129, 2388
HpaI GTTAAC 2 cut(s) 1713, 1861
HpaII CCGG 9 cut(s) 192, 227, 294, 624, 713, 829, 1135, 1143, 1169
HphI GGTGA 4 cut(s) 77, 943, 1980, 2086
Hpy188III TCNNGA 6 cut(s) 790, 799, 866, 1054, 1800, 2162
HpyAV CCTTC 9 cut(s) 213, 756, 928, 956, 1093, 1263, 1341, 1993, 2209
HpyCH4III ACNGT 2 cut(s) 1346, 1470
HpyCH4IV ACGT 5 cut(s) 114, 246, 528, 1086, 1436
HpyCH4V TGCA 8 cut(s) 376, 457, 1441, 1840, 2170, 2341, 2407, 2432
HpyF3I CTNAG 7 cut(s) 316, 1020, 1212, 1366, 1563, 1811, 2275
HpySE526I ACGT 5 cut(s) 114, 246, 528, 1086, 1436
Hsp92I GRCGYC 2 cut(s) 485, 603
HspAI GCGC 7 cut(s) 9, 44, 91, 603, 683, 1893, 2006
KasI GGCGCC 1 cut(s) 602
KroI GCCGGC 1 cut(s) 712
KroNI GCCGGC 1 cut(s) 714
KspAI GTTAAC 2 cut(s) 1713, 1861
KspI CCGCGG 2 cut(s) 39, 139
Kzo9I GATC 4 cut(s) 241, 1662, 1796, 2164
LmnI GCTCC 9 cut(s) 20, 302, 351, 721, 1157, 1553, 1596, 2398, 2437
Lsp1109I GCAGC 2 cut(s) 982, 1339
MaeI CTAG 8 cut(s) 173, 1197, 1316, 1760, 1992, 2249, 2313, 2334
MaeII ACGT 5 cut(s) 114, 246, 528, 1086, 1436
MaeIII GTNAC 4 cut(s) 1238, 1294, 2027, 2037
MalI GATC 4 cut(s) 243, 1664, 1798, 2166
MbiI CCGCTC 1 cut(s) 58
MboI GATC 4 cut(s) 241, 1662, 1796, 2164
MfeI CAATTG 1 cut(s) 1385
MflI RGATCY 2 cut(s) 1796, 2164
MhlI GDGCHC 3 cut(s) 17, 521, 954
MlsI TGGCCA 1 cut(s) 1684
MluNI TGGCCA 1 cut(s) 1684
Mly113I GGCGCC 1 cut(s) 603
MlyI GAGTC 4 cut(s) 308, 326, 827, 1241
MmeI TCCRAC 3 cut(s) 348, 381, 1365
Mox20I TGGCCA 1 cut(s) 1684
MroNI GCCGGC 1 cut(s) 712
MroXI GAANNNNTTC 1 cut(s) 1701
MscI TGGCCA 1 cut(s) 1684
MseI TTAA 6 cut(s) 1691, 1700, 1712, 1860, 1934, 2181
MslI CAYNNNNRTG 2 cut(s) 1827, 2102
Msp20I TGGCCA 1 cut(s) 1684
MspA1I CMGCKG 2 cut(s) 38, 138
MspI CCGG 9 cut(s) 192, 227, 294, 624, 713, 829, 1135, 1143, 1169
MspR9I CCNGG 6 cut(s) 625, 769, 830, 1170, 1717, 1777
MunI CAATTG 1 cut(s) 1385
Mva1269I GAATGC 2 cut(s) 1160, 1745
MvaI CCWGG 3 cut(s) 769, 1717, 1777
MvnI CGCG 6 cut(s) 11, 38, 54, 138, 683, 2257
NaeI GCCGGC 1 cut(s) 714
NarI GGCGCC 1 cut(s) 603
NciI CCSGG 3 cut(s) 625, 830, 1170
NcoI CCATGG 1 cut(s) 2358
NdeII GATC 4 cut(s) 241, 1662, 1796, 2164
NgoMIV GCCGGC 1 cut(s) 712
NlaIV GGNNCC 3 cut(s) 298, 604, 717
NmeAIII GCCGAG 5 cut(s) 130, 743, 849, 1071, 1513
NmuCI GTSAC 1 cut(s) 2037
NspI RCATGY 2 cut(s) 472, 1295
NspV TTCGAA 1 cut(s) 986
PaeR7I CTCGAG 1 cut(s) 835
PceI AGGCCT 1 cut(s) 1025
PciI ACATGT 1 cut(s) 1291
PcsI WCGNNNNNNNCGW 4 cut(s) 102, 333, 795, 1319
PctI GAATGC 2 cut(s) 1160, 1745
PdiI GCCGGC 1 cut(s) 714
PdmI GAANNNNTTC 1 cut(s) 1701
PfeI GAWTC 7 cut(s) 82, 320, 545, 1624, 1875, 2078, 2221
PflFI GACNNNGTC 2 cut(s) 335, 487
PflMI CCANNNNNTGG 1 cut(s) 1722
PleI GAGTC 4 cut(s) 308, 326, 827, 1240
PluTI GGCGCC 1 cut(s) 606
PmaCI CACGTG 1 cut(s) 1087
PmlI CACGTG 1 cut(s) 1087
PpsI GAGTC 4 cut(s) 308, 326, 827, 1240
Ppu21I YACGTR 1 cut(s) 1087
PpuMI RGGWCCY 2 cut(s) 1009, 1787
PscI ACATGT 1 cut(s) 1291
PshBI ATTAAT 1 cut(s) 1700
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 2 cut(s) 1009, 1787
Psp6I CCWGG 3 cut(s) 767, 1715, 1775
PspCI CACGTG 1 cut(s) 1087
PspGI CCWGG 3 cut(s) 767, 1715, 1775
PspN4I GGNNCC 3 cut(s) 298, 604, 717
PspPI GGNCC 8 cut(s) 109, 229, 1009, 1129, 1376, 1507, 1787, 2200
PspPPI RGGWCCY 2 cut(s) 1009, 1787
PspXI VCTCGAGB 1 cut(s) 835
PstNI CAGNNNCTG 2 cut(s) 1373, 2282
PsuI RGATCY 2 cut(s) 1796, 2164
PsyI GACNNNGTC 2 cut(s) 335, 487
RsaI GTAC 9 cut(s) 500, 533, 629, 887, 917, 1034, 1083, 1472, 2323
RsaNI GTAC 9 cut(s) 499, 532, 628, 886, 916, 1033, 1082, 1471, 2322
RseI CAYNNNNRTG 2 cut(s) 1827, 2102
Rsr2I CGGWCCG 1 cut(s) 229
RsrII CGGWCCG 1 cut(s) 229
SacI GAGCTC 1 cut(s) 17
SacII CCGCGG 2 cut(s) 39, 139
SaqAI TTAA 6 cut(s) 1691, 1700, 1712, 1860, 1934, 2181
Sau3AI GATC 4 cut(s) 241, 1662, 1796, 2164
Sau96I GGNCC 8 cut(s) 109, 229, 1009, 1129, 1376, 1507, 1787, 2200
ScaI AGTACT 1 cut(s) 2323
SchI GAGTC 4 cut(s) 308, 326, 827, 1241
ScrFI CCNGG 6 cut(s) 625, 769, 830, 1170, 1717, 1777
SduI GDGCHC 3 cut(s) 17, 521, 954
SfoI GGCGCC 1 cut(s) 604
Sfr274I CTCGAG 1 cut(s) 835
Sfr303I CCGCGG 2 cut(s) 39, 139
SfuI TTCGAA 1 cut(s) 986
SgrBI CCGCGG 2 cut(s) 39, 139
SinI GGWCC 7 cut(s) 229, 1009, 1129, 1376, 1507, 1787, 2200
SlaI CTCGAG 1 cut(s) 835
SmiMI CAYNNNNRTG 2 cut(s) 1827, 2102
SmlI CTYRAG 1 cut(s) 835
SmoI CTYRAG 1 cut(s) 835
SseBI AGGCCT 1 cut(s) 1025
SspDI GGCGCC 1 cut(s) 602
SspMI CTAG 8 cut(s) 173, 1197, 1316, 1760, 1992, 2249, 2313, 2334
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 1025
StyD4I CCNGG 6 cut(s) 623, 767, 828, 1168, 1715, 1775
StyI CCWWGG 1 cut(s) 2358
TaaI ACNGT 2 cut(s) 1346, 1470
TaiI ACGT 5 cut(s) 117, 249, 531, 1089, 1439
TatI WGTACW 3 cut(s) 885, 1470, 2321
TfiI GAWTC 7 cut(s) 82, 320, 545, 1624, 1875, 2078, 2221
Tru1I TTAA 6 cut(s) 1691, 1700, 1712, 1860, 1934, 2181
Tru9I TTAA 6 cut(s) 1691, 1700, 1712, 1860, 1934, 2181
TscAI CASTG 4 cut(s) 1351, 1760, 2039, 2419
TseFI GTSAC 1 cut(s) 2037
TseI GCWGC 3 cut(s) 6, 970, 1327
Tsp45I GTSAC 1 cut(s) 2037
TspGWI ACGGA 3 cut(s) 325, 1266, 2387
TspRI CASTG 4 cut(s) 1351, 1760, 2039, 2419
Tth111I GACNNNGTC 2 cut(s) 335, 487
Van91I CCANNNNNTGG 1 cut(s) 1722
VpaK11BI GGWCC 7 cut(s) 229, 1009, 1129, 1376, 1507, 1787, 2200
VspI ATTAAT 1 cut(s) 1700
XagI CCTNNNNNAGG 1 cut(s) 74
XapI RAATTY 4 cut(s) 861, 1203, 2177, 2346
XceI RCATGY 2 cut(s) 472, 1295
XhoI CTCGAG 1 cut(s) 835
XmnI GAANNNNTTC 1 cut(s) 1701
XspI CTAG 8 cut(s) 173, 1197, 1316, 1760, 1992, 2249, 2313, 2334
ZrmI AGTACT 1 cut(s) 2323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.