Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007211

Physical Location & Seq

Genomic Coordinates Forward (+)

47409938 .. 47415172

Gene Structure 5235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00200120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGAACGCTTCAATAATCGGAGATTTCCCAGAAGTGATAGAGGAGTATTTGGAACATGGGGTTATGAAATGCATTGCCTTCAATCGCCGTGGTACTCTTCTTGCTGCTGGGTGCTCTGATGGTAATTGCATAATATGGGATTTTGAGACCAGGGGCATTGCTAAGGAGCTTCGTGATAAAGACTGTGTTGCTGCCATAACTAGTGTATGTTGGTCAAAATATGGTCATCGTGTTCTTGTGTCTGCAGCTGACAAATCGTTGACACTATGGGATGTTGTCAGTGGTGAGAAGATAACAAGAACGATACTGCAACAAACCCCTCTACAAGCTCGGTTACATCCTGGTTCCTCTACTCCATCTCTCTGCCTGGCTTGCCCTCTCTCATCTGCTCCTATGATTGTTGACTTGAATACAGGAAGTGCAACTATGCTTCCAGTTTCCATTCTGGACTCTAACCCAGGATTTGCCCCTCCATCGCGGAATAAAATCTCTGATGGAACTCCCCCTTTTCTCCTACTGCTGCTTGCTTTAATAATGCTTGCAATGGTTCCTACTTCTGGAGGTTCCGTGATTAAGAATATAGTATTCAGCAGGAATGGTCAGTATCTGCTTACAAATTCAAATGATAGAACAATAAGGATTTACGAGAACCTTCTTCCCTTGAAAGGTGGACTCAAAGCCTTAAATCGCTTGACTGCTCTTGATGGACTAGATGATGCTGAGAAGTTGAAAGTTGTTGGATCAAAATGCTTAACACTATTCCGTGAGTTTCAAGATACCATCACAAAGATGCATTGGAAAGCACCTTGTTTCAGTGGTGATGGTGAGTGGGTAATTGGTGGTTCTGCAAGCAAAGGAGAACACAAGATTTACATATGGGACAGGGCTGGGCATCTTGTGAAAATTCTTGAAGGGCCAAAGGAAGCTTTGATCGATTTAGTGTGGCATCCTGTTCATCCCATTGTTGTCTCTGTTTCCCTGACGGGCTTGGTTTATATTTGGGCTAAAGATTACACTGAGAACTGGAGTGCATTTGCTCCTGATTTTAAGGAGCTCGAGGAAAATGAGGAGTACATAGAACGAGAAGATGAATTTGATCTGATACCCGAAACTGAAAAGGCCAAAGAATCTAATGTTAATGAAGATGATGAAGTTGATATCGTGACAGTGGACAAGGATTCAGCTTTCAGTGATTCAGATATGTCACAGGAAGAGCTATGCTTCTTGCCAGCAATTCCTTTGCCTGATGCTCCTGAGCAACAAGACAAGTGCTTAGAAAGTTCATCAAAGTTGGTGGAAAGTAATAATTCTGGCTCCCCTCTTTCAGAAGAGGGCAGACCTAATGGTCGTGCAATGAATCATGCATCAAGTCCGCTTGAAGACAAACGGACAGAAGCTGAGATAGCAGTGTTTGAGAACAGCATAGTAGTTTACAAGTTTGTTCAAGACCTTCACTTTTTTGTTACCGGGGTTGATAATAAAAATGAGCTCATTTTAGCCACAGTTCTTCAGGTTTTTGATGCGGTTGGAATTCTCCTCAGAGGCAATGTGGATAAAAAGGAGGCACTTGAATATTTGAACCTCATTCTACTATGCCTAGATGAAATTGTTGATGGCAGCATTGTTCTTGAGACCGATTCAAATGTTATAGCAAGCAAGGTTGCGAGTCATAGTATTGATTCTGGAGCTCCGTTATCTGAGCAGACAATAGGACAAGCACTTGCTACTCCACGTGAACATTTTGCAAGATCTCTTCTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034708 GO:0034968 GO:0035064 GO:0035097 GO:0036211 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044665 GO:0044666 GO:0048188 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051568 GO:0051716 GO:0061458 GO:0070013 GO:0071339 GO:0071704 GO:0071840 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

WD40

Protein Analysis

587

Amino Acids

64.47

Weight (kDa)

4.79

Isoelectric Point (pI)

36.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_TEP1_2nd	PF25047	10 - 107	1e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	21 - 100	1.1e-09	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	21 - 96	6.6e-08	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	22 - 101	3.1e-11	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	22 - 114	7e-12	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	22 - 100	3.8e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	22 - 106	6e-06	WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz	PF24807	25 - 100	3.2e-07	CDC20/Fizzy WD40 domain
Clat_adaptor_s	PF01217	464 - 555	4.3e-10	Clathrin adaptor complex small chain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21060
fragaria_vesca	FvH4_2g10510 FvH4_2g10510 FvH4_2g10510 FvH4_2g10510
malus_domestica	MD02G1259400.v1.1 MD07G1061200.v1.1
prunus_persica	Prupe.5G058900_v2.0.a1 Prupe.5G058900_v2.0.a1
pyrus_communis	pycom02g22080
rosa_chinensis	RchiOBHm_Chr6g0268021
rosa_laevigata	RLG00000013939
rosa_multiflora	Rmu_sc0001839.1_g000031 Rmu_sc0003304.1_g000001 Rmu_sc0003304.1_g000039 Rmu_sc0004529.1_g000038
rosa_roxburghii	Rroxscaffold_7G00200120 Rroxscaffold_7G00200140
rosa_rugosa	Rorug06G0038800
rosa_samantha	Rh6AG158100 Rh6BG162100 Rh6CG156300 Rh6DG147700
rosa_wichuraiana	Rw0G021300 Rw6G013760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1344
AccII	CGCG	1 cut(s)	478
AciI	CCGC	3 cut(s)	478, 1373, 1523
AclWI	GGATC	1 cut(s)	748
AcsI	RAATTY	4 cut(s)	616, 903, 1091, 1530
AcuI	CTGAAG	1 cut(s)	1493
AcvI	CACGTG	1 cut(s)	1733
AfaI	GTAC	2 cut(s)	94, 1073
AfiI	CCNNNNNNNGG	2 cut(s)	557, 665
AflII	CTTAAG	1 cut(s)	1757
AhlI	ACTAGT	1 cut(s)	200
AjnI	CCWGG	4 cut(s)	149, 340, 366, 457
Alw21I	GWGCWC	4 cut(s)	116, 1056, 1491, 1690
Alw26I	GTCTC	3 cut(s)	140, 973, 1625
AlwI	GGATC	1 cut(s)	748
AlwNI	CAGNNNCTG	2 cut(s)	607, 1397
Ama87I	CYCGRG	1 cut(s)	1055
AoxI	GGCC	2 cut(s)	914, 1119
ApeKI	GCWGC	5 cut(s)	104, 191, 245, 520, 1617
ApoI	RAATTY	4 cut(s)	616, 903, 1091, 1530
AspS9I	GGNCC	1 cut(s)	914
AsuC2I	CCSGG	1 cut(s)	1468
AsuHPI	GGTGA	3 cut(s)	296, 830, 836
AvaI	CYCGRG	1 cut(s)	1055
BanII	GRGCYC	3 cut(s)	1056, 1491, 1690
BbrPI	CACGTG	1 cut(s)	1733
BbsI	GAAGAC	1 cut(s)	1386
Bbv12I	GWGCWC	4 cut(s)	116, 1056, 1491, 1690
BbvI	GCAGC	5 cut(s)	91, 178, 257, 507, 1629
BccI	CCATC	8 cut(s)	113, 364, 481, 488, 698, 788, 815, 1607
BceAI	ACGGC	1 cut(s)	72
BciT130I	CCWGG	4 cut(s)	151, 342, 368, 459
BcnI	CCSGG	1 cut(s)	1468
BcoDI	GTCTC	3 cut(s)	140, 973, 1625
BcuI	ACTAGT	1 cut(s)	200
BfaI	CTAG	3 cut(s)	201, 710, 1598
BfmI	CTRYAG	1 cut(s)	243
BfrI	CTTAAG	1 cut(s)	1757
BglII	AGATCT	1 cut(s)	1748
BisI	GCNGC	5 cut(s)	105, 192, 246, 521, 1618
BlsI	GCNGC	5 cut(s)	106, 193, 247, 522, 1619
Bme1390I	CCNGG	5 cut(s)	151, 342, 368, 459, 1468
BmeT110I	CYCGRG	1 cut(s)	1055
BmgT120I	GGNCC	1 cut(s)	914
BmiI	GGNNCC	4 cut(s)	346, 549, 565, 1315
BmrFI	CCNGG	5 cut(s)	151, 342, 368, 459, 1468
BmsI	GCATC	7 cut(s)	706, 780, 901, 955, 1237, 1373, 1510
BpiI	GAAGAC	1 cut(s)	1386
BpmI	CTGGAG	3 cut(s)	579, 1045, 1704
Bpu10I	CCTNAGC	2 cut(s)	162, 1254
BpuEI	CTTGAG	1 cut(s)	1649
BpuMI	CCSGG	1 cut(s)	1468
Bsa29I	ATCGAT	1 cut(s)	933
BsaAI	YACGTR	1 cut(s)	1733
BsaI	GGTCTC	2 cut(s)	140, 1625
BsaJI	CCNNGG	4 cut(s)	88, 150, 457, 1467
BsaXI	ACNNNNNCTCC	2 cut(s)	552, 582
Bsc4I	CCNNNNNNNGG	2 cut(s)	557, 665
Bse1I	ACTGG	2 cut(s)	434, 1028
Bse3DI	GCAATG	5 cut(s)	72, 156, 549, 1359, 1552
BseBI	CCWGG	4 cut(s)	151, 342, 368, 459
BseCI	ATCGAT	1 cut(s)	933
BseDI	CCNNGG	4 cut(s)	88, 150, 457, 1467
BseGI	GGATG	4 cut(s)	277, 337, 946, 955
BseLI	CCNNNNNNNGG	2 cut(s)	557, 665
BseMI	GCAATG	5 cut(s)	72, 156, 549, 1359, 1552
BseMII	CTCAG	6 cut(s)	711, 1008, 1245, 1389, 1552, 1689
BseNI	ACTGG	2 cut(s)	434, 1028
BseRI	GAGGAG	3 cut(s)	56, 1082, 1526
BseXI	GCAGC	5 cut(s)	91, 178, 257, 507, 1629
BseYI	CCCAGC	2 cut(s)	107, 887
Bsh1236I	CGCG	1 cut(s)	478
BshFI	GGCC	2 cut(s)	916, 1121
BshVI	ATCGAT	1 cut(s)	933
BsiHKAI	GWGCWC	4 cut(s)	116, 1056, 1491, 1690
BsiHKCI	CYCGRG	1 cut(s)	1055
BsiSI	CCGG	1 cut(s)	1467
BslFI	GGGAC	1 cut(s)	893
BslI	CCNNNNNNNGG	2 cut(s)	557, 665
BsmAI	GTCTC	3 cut(s)	140, 973, 1625
BsmFI	GGGAC	1 cut(s)	893
BsnI	GGCC	2 cut(s)	916, 1121
Bso31I	GGTCTC	2 cut(s)	140, 1625
BsoBI	CYCGRG	1 cut(s)	1055
Bsp1286I	GDGCHC	4 cut(s)	116, 1056, 1491, 1690
Bsp143I	GATC	4 cut(s)	740, 930, 1096, 1748
BspACI	CCGC	3 cut(s)	478, 1373, 1523
BspANI	GGCC	2 cut(s)	916, 1121
BspCNI	CTCAG	6 cut(s)	712, 1009, 1246, 1390, 1551, 1690
BspDI	ATCGAT	1 cut(s)	933
BspFNI	CGCG	1 cut(s)	478
BspLI	GGNNCC	4 cut(s)	346, 549, 565, 1315
BspMAI	CTGCAG	1 cut(s)	247
BspPI	GGATC	1 cut(s)	748
BspQI	GCTCTTC	1 cut(s)	1206
BspTI	CTTAAG	1 cut(s)	1757
BspTNI	GGTCTC	2 cut(s)	140, 1625
BsrDI	GCAATG	5 cut(s)	72, 156, 549, 1359, 1552
BsrI	ACTGG	2 cut(s)	434, 1028
BssECI	CCNNGG	4 cut(s)	88, 150, 457, 1467
BssMI	GATC	4 cut(s)	740, 930, 1096, 1748
Bst2UI	CCWGG	4 cut(s)	151, 342, 368, 459
Bst4CI	ACNGT	3 cut(s)	185, 1168, 1504
Bst6I	CTCTTC	4 cut(s)	102, 1206, 1323, 1758
BstAFI	CTTAAG	1 cut(s)	1757
BstBAI	YACGTR	1 cut(s)	1733
BstC8I	GCNNGC	6 cut(s)	373, 525, 540, 850, 1230, 1654
BstDEI	CTNAG	8 cut(s)	162, 720, 1017, 1254, 1273, 1398, 1538, 1698
BstDSI	CCRYGG	1 cut(s)	88
BstF5I	GGATG	4 cut(s)	277, 337, 946, 955
BstFNI	CGCG	1 cut(s)	478
BstKTI	GATC	4 cut(s)	743, 933, 1099, 1751
BstMAI	GTCTC	3 cut(s)	140, 973, 1625
BstMBI	GATC	4 cut(s)	740, 930, 1096, 1748
BstMWI	GCNNNNNNNGC	2 cut(s)	372, 1403
BstNI	CCWGG	4 cut(s)	151, 342, 368, 459
BstSCI	CCNGG	5 cut(s)	149, 340, 366, 457, 1466
BstSFI	CTRYAG	1 cut(s)	243
BstUI	CGCG	1 cut(s)	478
BstV1I	GCAGC	5 cut(s)	91, 178, 257, 507, 1629
BstV2I	GAAGAC	1 cut(s)	1386
BstX2I	RGATCY	1 cut(s)	1748
BstYI	RGATCY	1 cut(s)	1748
Bsu15I	ATCGAT	1 cut(s)	933
BsuRI	GGCC	2 cut(s)	916, 1121
BsuTUI	ATCGAT	1 cut(s)	933
BtgI	CCRYGG	1 cut(s)	88
BtgZI	GCGATG	1 cut(s)	459
BtsCI	GGATG	4 cut(s)	277, 337, 946, 955
BtsI	GCAGTG	1 cut(s)	1413
BtsIMutI	CAGTG	6 cut(s)	286, 820, 1014, 1173, 1195, 1413
Cac8I	GCNNGC	6 cut(s)	373, 525, 540, 850, 1230, 1654
CaiI	CAGNNNCTG	2 cut(s)	607, 1397
Cfr13I	GGNCC	1 cut(s)	914
ClaI	ATCGAT	1 cut(s)	933
Csp6I	GTAC	2 cut(s)	93, 1072
CspCI	CAANNNNNGTGG	4 cut(s)	70, 105, 1275, 1310
CviAII	CATG	2 cut(s)	56, 1361
CviQI	GTAC	2 cut(s)	93, 1072
DdeI	CTNAG	8 cut(s)	162, 720, 1017, 1254, 1273, 1398, 1538, 1698
DpnI	GATC	4 cut(s)	742, 932, 1098, 1750
DpnII	GATC	4 cut(s)	740, 930, 1096, 1748
DrdI	GACNNNNNNGTC	1 cut(s)	1344
DseDI	GACNNNNNNGTC	1 cut(s)	1344
Eam1104I	CTCTTC	4 cut(s)	102, 1206, 1323, 1758
EarI	CTCTTC	4 cut(s)	102, 1206, 1323, 1758
Ecl136II	GAGCTC	3 cut(s)	1054, 1489, 1688
Eco24I	GRGCYC	3 cut(s)	1056, 1491, 1690
Eco31I	GGTCTC	2 cut(s)	140, 1625
Eco32I	GATATC	1 cut(s)	1159
Eco53kI	GAGCTC	3 cut(s)	1054, 1489, 1688
Eco57I	CTGAAG	1 cut(s)	1493
Eco72I	CACGTG	1 cut(s)	1733
Eco88I	CYCGRG	1 cut(s)	1055
EcoICRI	GAGCTC	3 cut(s)	1054, 1489, 1688
EcoRI	GAATTC	1 cut(s)	1530
EcoRII	CCWGG	4 cut(s)	149, 340, 366, 457
EcoRV	GATATC	1 cut(s)	1159
EcoT22I	ATGCAT	3 cut(s)	74, 795, 1366
EcoT38I	GRGCYC	3 cut(s)	1056, 1491, 1690
FaeI	CATG	2 cut(s)	59, 1364
FaqI	GGGAC	1 cut(s)	893
FatI	CATG	2 cut(s)	55, 1360
FauNDI	CATATG	1 cut(s)	875
Fnu4HI	GCNGC	5 cut(s)	105, 192, 246, 521, 1618
FokI	GGATG	4 cut(s)	284, 324, 933, 942
FriOI	GRGCYC	3 cut(s)	1056, 1491, 1690
Fsp4HI	GCNGC	5 cut(s)	105, 192, 246, 521, 1618
FspBI	CTAG	3 cut(s)	201, 710, 1598
GluI	GCNGC	5 cut(s)	105, 192, 246, 521, 1618
GsaI	CCCAGC	2 cut(s)	111, 891
GsuI	CTGGAG	3 cut(s)	579, 1045, 1704
HaeIII	GGCC	2 cut(s)	916, 1121
HapII	CCGG	1 cut(s)	1467
Hin1II	CATG	2 cut(s)	59, 1364
HincII	GTYRAC	2 cut(s)	261, 403
HindII	GTYRAC	2 cut(s)	261, 403
HindIII	AAGCTT	1 cut(s)	924
HinfI	GANTC	9 cut(s)	449, 672, 1127, 1178, 1193, 1357, 1637, 1666, 1679
HpaII	CCGG	1 cut(s)	1467
HphI	GGTGA	3 cut(s)	296, 830, 836
Hpy166II	GTNNAC	6 cut(s)	261, 403, 671, 1171, 1432, 1736
Hpy188I	TCNGA	8 cut(s)	20, 118, 493, 1101, 1198, 1327, 1541, 1699
Hpy8I	GTNNAC	6 cut(s)	261, 403, 671, 1171, 1432, 1736
HpyAV	CCTTC	4 cut(s)	88, 662, 905, 1460
HpyCH4III	ACNGT	3 cut(s)	185, 1168, 1504
HpyCH4IV	ACGT	1 cut(s)	1732
HpyF10VI	GCNNNNNNNGC	2 cut(s)	372, 1403
HpyF3I	CTNAG	8 cut(s)	162, 720, 1017, 1254, 1273, 1398, 1538, 1698
HpySE526I	ACGT	1 cut(s)	1732
Hsp92II	CATG	2 cut(s)	59, 1364
Kzo9I	GATC	4 cut(s)	740, 930, 1096, 1748
LguI	GCTCTTC	1 cut(s)	1206
LmnI	GCTCC	8 cut(s)	166, 394, 1042, 1051, 1255, 1319, 1685, 1693
Lsp1109I	GCAGC	5 cut(s)	91, 178, 257, 507, 1629
LweI	GCATC	7 cut(s)	706, 780, 901, 955, 1237, 1373, 1510
MaeI	CTAG	3 cut(s)	201, 710, 1598
MaeII	ACGT	1 cut(s)	1732
MaeIII	GTNAC	4 cut(s)	333, 1162, 1203, 1462
MalI	GATC	4 cut(s)	742, 932, 1098, 1750
MboI	GATC	4 cut(s)	740, 930, 1096, 1748
MflI	RGATCY	1 cut(s)	1748
MhlI	GDGCHC	4 cut(s)	116, 1056, 1491, 1690
MluCI	AATT	9 cut(s)	124, 616, 834, 903, 1091, 1233, 1306, 1530, 1605
MlyI	GAGTC	3 cut(s)	443, 666, 1675
MmeI	TCCRAC	2 cut(s)	718, 1507
Mph1103I	ATGCAT	3 cut(s)	74, 795, 1366
MseI	TTAA	7 cut(s)	530, 573, 683, 752, 1047, 1137, 1758
MslI	CAYNNNNRTG	1 cut(s)	788
MspA1I	CMGCKG	1 cut(s)	248
MspCI	CTTAAG	1 cut(s)	1757
MspI	CCGG	1 cut(s)	1467
MspR9I	CCNGG	5 cut(s)	151, 342, 368, 459, 1468
MvaI	CCWGG	4 cut(s)	151, 342, 368, 459
MvnI	CGCG	1 cut(s)	478
MwoI	GCNNNNNNNGC	2 cut(s)	372, 1403
NciI	CCSGG	1 cut(s)	1468
NdeI	CATATG	1 cut(s)	875
NdeII	GATC	4 cut(s)	740, 930, 1096, 1748
NlaIII	CATG	2 cut(s)	59, 1364
NlaIV	GGNNCC	4 cut(s)	346, 549, 565, 1315
NmuCI	GTSAC	2 cut(s)	1162, 1203
NsiI	ATGCAT	3 cut(s)	74, 795, 1366
PaeR7I	CTCGAG	1 cut(s)	1055
PciSI	GCTCTTC	1 cut(s)	1206
PfeI	GAWTC	6 cut(s)	1127, 1178, 1193, 1357, 1637, 1679
PkrI	GCNGC	5 cut(s)	106, 193, 247, 522, 1619
PleI	GAGTC	3 cut(s)	443, 666, 1674
PmaCI	CACGTG	1 cut(s)	1733
PmlI	CACGTG	1 cut(s)	1733
PpsI	GAGTC	3 cut(s)	443, 666, 1674
Ppu21I	YACGTR	1 cut(s)	1733
Psp124BI	GAGCTC	3 cut(s)	1056, 1491, 1690
Psp6I	CCWGG	4 cut(s)	149, 340, 366, 457
PspCI	CACGTG	1 cut(s)	1733
PspFI	CCCAGC	2 cut(s)	107, 887
PspGI	CCWGG	4 cut(s)	149, 340, 366, 457
PspN4I	GGNNCC	4 cut(s)	346, 549, 565, 1315
PspPI	GGNCC	1 cut(s)	914
PspXI	VCTCGAGB	1 cut(s)	1055
PstI	CTGCAG	1 cut(s)	247
PstNI	CAGNNNCTG	2 cut(s)	607, 1397
PsuI	RGATCY	1 cut(s)	1748
PvuII	CAGCTG	1 cut(s)	248
RsaI	GTAC	2 cut(s)	94, 1073
RsaNI	GTAC	2 cut(s)	93, 1072
RseI	CAYNNNNRTG	1 cut(s)	788
SacI	GAGCTC	3 cut(s)	1056, 1491, 1690
SapI	GCTCTTC	1 cut(s)	1206
SaqAI	TTAA	7 cut(s)	530, 573, 683, 752, 1047, 1137, 1758
SatI	GCNGC	5 cut(s)	105, 192, 246, 521, 1618
Sau3AI	GATC	4 cut(s)	740, 930, 1096, 1748
Sau96I	GGNCC	1 cut(s)	914
SchI	GAGTC	3 cut(s)	443, 666, 1675
ScrFI	CCNGG	5 cut(s)	151, 342, 368, 459, 1468
SduI	GDGCHC	4 cut(s)	116, 1056, 1491, 1690
SfaNI	GCATC	7 cut(s)	706, 780, 901, 955, 1237, 1373, 1510
SfcI	CTRYAG	1 cut(s)	243
Sfr274I	CTCGAG	1 cut(s)	1055
SlaI	CTCGAG	1 cut(s)	1055
SmiMI	CAYNNNNRTG	1 cut(s)	788
SmlI	CTYRAG	3 cut(s)	1055, 1628, 1757
SmoI	CTYRAG	3 cut(s)	1055, 1628, 1757
SpeI	ACTAGT	1 cut(s)	200
Sse9I	AATT	9 cut(s)	124, 616, 834, 903, 1091, 1233, 1306, 1530, 1605
SsiI	CCGC	3 cut(s)	478, 1373, 1523
SspI	AATATT	1 cut(s)	1574
SspMI	CTAG	3 cut(s)	201, 710, 1598
SstI	GAGCTC	3 cut(s)	1056, 1491, 1690
StyD4I	CCNGG	5 cut(s)	149, 340, 366, 457, 1466
TaaI	ACNGT	3 cut(s)	185, 1168, 1504
TaiI	ACGT	1 cut(s)	1735
TaqI	TCGA	2 cut(s)	933, 1056
TaqII	GACCGA	1 cut(s)	1649
TasI	AATT	9 cut(s)	124, 616, 834, 903, 1091, 1233, 1306, 1530, 1605
TatI	WGTACW	1 cut(s)	1071
TfiI	GAWTC	6 cut(s)	1127, 1178, 1193, 1357, 1637, 1679
Tru1I	TTAA	7 cut(s)	530, 573, 683, 752, 1047, 1137, 1758
Tru9I	TTAA	7 cut(s)	530, 573, 683, 752, 1047, 1137, 1758
TscAI	CASTG	6 cut(s)	286, 820, 1021, 1173, 1195, 1413
TseFI	GTSAC	2 cut(s)	1162, 1203
TseI	GCWGC	5 cut(s)	104, 191, 245, 520, 1617
Tsp45I	GTSAC	2 cut(s)	1162, 1203
TspDTI	ATGAA	9 cut(s)	17, 80, 944, 1104, 1155, 1164, 1272, 1370, 1617
TspGWI	ACGGA	4 cut(s)	556, 752, 1402, 1680
TspRI	CASTG	6 cut(s)	286, 820, 1021, 1173, 1195, 1413
Vha464I	CTTAAG	1 cut(s)	1757
XapI	RAATTY	4 cut(s)	616, 903, 1091, 1530
XhoI	CTCGAG	1 cut(s)	1055
XspI	CTAG	3 cut(s)	201, 710, 1598
Zsp2I	ATGCAT	3 cut(s)	74, 795, 1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.